Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:34 (133825): wrapper (7.7.26015): starting
00:04:34 (133825): wrapper: running run_atlas (--nthreads 9)
[2025-12-16 00:04:34] Arguments: --nthreads 9
[2025-12-16 00:04:34] Threads: 9
[2025-12-16 00:04:34] Checking for CVMFS
[2025-12-16 00:04:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 00:04:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 00:04:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 00:04:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 00:04:37] 2.13.3.0 5641 19066 201776 154058 1 216 30661141 32935937 14765 16776704 0 47809217 99.211 91417252 36251 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 00:04:37] CVMFS is ok
[2025-12-16 00:04:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 00:04:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 00:04:37] Further information can be found at the LHC@home message board.
[2025-12-16 00:04:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 00:04:37] Checking for apptainer binary...
[2025-12-16 00:04:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 00:04:37] Running /usr/bin/apptainer --version
[2025-12-16 00:04:37] apptainer version 1.4.5-2.el9
[2025-12-16 00:04:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 00:04:38] c6-1-26-1.aglt2.org
[2025-12-16 00:04:38] apptainer works
[2025-12-16 00:04:38] Set ATHENA_PROC_NUMBER=9
[2025-12-16 00:04:38] Set ATHENA_CORE_NUMBER=9
[2025-12-16 00:04:38] Starting ATLAS job with PandaID=6929962351
[2025-12-16 00:04:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 09:14:10]  *** The last 200 lines of the pilot log: ***
[2025-12-16 09:14:11] 2025-12-16 14:13:28,943 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6929962351/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 09:14:11] 2025-12-16 14:13:28,944 | INFO     | extracted standard info from prmon json
[2025-12-16 09:14:11] 2025-12-16 14:13:28,944 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 09:14:11] 2025-12-16 14:13:28,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 09:14:11] 2025-12-16 14:13:28,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 09:14:11] 2025-12-16 14:13:28,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 09:14:11] 2025-12-16 14:13:29,037 | INFO     | fitting pss+swap vs Time
[2025-12-16 09:14:11] 2025-12-16 14:13:29,038 | INFO     | sum of square deviations: 47480678994.70336
[2025-12-16 09:14:11] 2025-12-16 14:13:29,077 | INFO     | sum of deviations: 272105674570.9162
[2025-12-16 09:14:11] 2025-12-16 14:13:29,078 | INFO     | mean x: 1765878027.0785046
[2025-12-16 09:14:11] 2025-12-16 14:13:29,078 | INFO     | mean y: 2494044.644859813
[2025-12-16 09:14:11] 2025-12-16 14:13:29,078 | INFO     | intersect: -10117526181.303408
[2025-12-16 09:14:11] 2025-12-16 14:13:29,078 | INFO     | chi2: 4.601771984759121
[2025-12-16 09:14:11] 2025-12-16 14:13:29,079 | INFO     | sum of square deviations: 46161955826.33212
[2025-12-16 09:14:11] 2025-12-16 14:13:29,125 | INFO     | sum of deviations: 305022519717.47534
[2025-12-16 09:14:11] 2025-12-16 14:13:29,125 | INFO     | mean x: 1765877874.5886793
[2025-12-16 09:14:11] 2025-12-16 14:13:29,125 | INFO     | mean y: 2497818.479245283
[2025-12-16 09:14:11] 2025-12-16 14:13:29,126 | INFO     | intersect: -11665823186.9563
[2025-12-16 09:14:11] 2025-12-16 14:13:29,126 | INFO     | chi2: 3.798731340077112
[2025-12-16 09:14:11] 2025-12-16 14:13:29,126 | INFO     | current chi2=3.798731340077112 (change=17.45068307038346 %)
[2025-12-16 09:14:11] 2025-12-16 14:13:29,126 | INFO     | right removable region: 529
[2025-12-16 09:14:11] 2025-12-16 14:13:29,127 | INFO     | sum of square deviations: 46161636370.50763
[2025-12-16 09:14:11] 2025-12-16 14:13:29,166 | INFO     | sum of deviations: 113712581484.14345
[2025-12-16 09:14:11] 2025-12-16 14:13:29,166 | INFO     | mean x: 1765878179.5867925
[2025-12-16 09:14:11] 2025-12-16 14:13:29,200 | INFO     | mean y: 2512338.6490566037
[2025-12-16 09:14:11] 2025-12-16 14:13:29,200 | INFO     | intersect: -4347475707.173892
[2025-12-16 09:14:11] 2025-12-16 14:13:29,201 | INFO     | chi2: 1.3923601141458306
[2025-12-16 09:14:11] 2025-12-16 14:13:29,201 | INFO     | current chi2=1.3923601141458306 (change=69.74295730520178 %)
[2025-12-16 09:14:11] 2025-12-16 14:13:29,202 | INFO     | sum of square deviations: 44867277824.42694
[2025-12-16 09:14:11] 2025-12-16 14:13:29,209 | INFO     | sum of deviations: 56182769275.23988
[2025-12-16 09:14:11] 2025-12-16 14:13:29,209 | INFO     | mean x: 1765878332.0933332
[2025-12-16 09:14:11] 2025-12-16 14:13:29,209 | INFO     | mean y: 2519109.24
[2025-12-16 09:14:11] 2025-12-16 14:13:29,209 | INFO     | intersect: -2208712320.6759815
[2025-12-16 09:14:11] 2025-12-16 14:13:29,210 | INFO     | chi2: 0.9909035790789553
[2025-12-16 09:14:11] 2025-12-16 14:13:29,247 | INFO     | current chi2=0.9909035790789553 (change=28.832809198441904 %)
[2025-12-16 09:14:11] 2025-12-16 14:13:29,248 | INFO     | sum of square deviations: 43597369998.997986
[2025-12-16 09:14:11] 2025-12-16 14:13:29,287 | INFO     | monitor loop #1819: job 0:6929962351 is in state 'finished'
[2025-12-16 09:14:11] 2025-12-16 14:13:29,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 09:14:11] 2025-12-16 14:13:29,298 | INFO     | sum of deviations: 23731891595.70378
[2025-12-16 09:14:11] 2025-12-16 14:13:29,298 | INFO     | mean x: 1765878484.5980768
[2025-12-16 09:14:11] 2025-12-16 14:13:29,298 | INFO     | mean y: 2523003.1038461537
[2025-12-16 09:14:11] 2025-12-16 14:13:29,298 | INFO     | intersect: -958719309.6464506
[2025-12-16 09:14:11] 2025-12-16 14:13:29,299 | INFO     | chi2: 0.8667570060131432
[2025-12-16 09:14:11] 2025-12-16 14:13:29,299 | INFO     | current chi2=0.8667570060131432 (change=12.528622934353143 %)
[2025-12-16 09:14:11] 2025-12-16 14:13:29,299 | INFO     | left removable region: 30
[2025-12-16 09:14:11] 2025-12-16 14:13:29,300 | INFO     | sum of square deviations: 38525777437.37081
[2025-12-16 09:14:11] 2025-12-16 14:13:29,372 | INFO     | sum of deviations: 40023725758.6493
[2025-12-16 09:14:11] 2025-12-16 14:13:29,373 | INFO     | mean x: 1765878759.1062124
[2025-12-16 09:14:11] 2025-12-16 14:13:29,373 | INFO     | mean y: 2529316.629258517
[2025-12-16 09:14:11] 2025-12-16 14:13:29,373 | INFO     | intersect: -1832009838.1583815
[2025-12-16 09:14:11] 2025-12-16 14:13:29,373 | INFO     | chi2: 0.00594583378776232
[2025-12-16 09:14:11] 2025-12-16 14:13:29,374 | INFO     | current memory leak: 1.04 B/s (using 499 data points, chi2=0.01)
[2025-12-16 09:14:11] 2025-12-16 14:13:29,374 | INFO     | could have reported an average CPU frequency of 2806 MHz (21 samples)
[2025-12-16 09:14:11] 2025-12-16 14:13:29,375 | INFO     | ..............................
[2025-12-16 09:14:11] 2025-12-16 14:13:29,375 | INFO     | . Timing measurements:
[2025-12-16 09:14:11] 2025-12-16 14:13:29,375 | INFO     | . get job = 0 s
[2025-12-16 09:14:11] 2025-12-16 14:13:29,375 | INFO     | . initial setup = 9 s
[2025-12-16 09:14:11] 2025-12-16 14:13:29,375 | INFO     | . payload setup = 52 s
[2025-12-16 09:14:11] 2025-12-16 14:13:29,375 | INFO     | . stage-in = 1 s
[2025-12-16 09:14:11] 2025-12-16 14:13:29,375 | INFO     | . payload execution = 32657 s
[2025-12-16 09:14:11] 2025-12-16 14:13:29,375 | INFO     | . stage-out = 7 s
[2025-12-16 09:14:11] 2025-12-16 14:13:29,375 | INFO     | . log creation = 0 s
[2025-12-16 09:14:11] 2025-12-16 14:13:29,375 | INFO     | ..............................
[2025-12-16 09:14:11] 2025-12-16 14:13:29,887 | INFO     | 
[2025-12-16 09:14:11] 2025-12-16 14:13:29,887 | INFO     | job summary report
[2025-12-16 09:14:11] 2025-12-16 14:13:29,887 | INFO     | --------------------------------------------------
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | PanDA job id: 6929962351
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | task id: 47886831
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | errors: (none)
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | pilot state: finished 
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | transexitcode: 0
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | exeerrorcode: 0
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | exeerrordiag: 
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | exitcode: 0
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | exitmsg: OK
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | cpuconsumptiontime: 44404 s
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | nevents: 400
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | neventsw: 0
[2025-12-16 09:14:11] 2025-12-16 14:13:29,888 | INFO     | pid: 183268
[2025-12-16 09:14:11] 2025-12-16 14:13:29,889 | INFO     | pgrp: 183268
[2025-12-16 09:14:11] 2025-12-16 14:13:29,889 | INFO     | corecount: 9
[2025-12-16 09:14:11] 2025-12-16 14:13:29,889 | INFO     | event service: False
[2025-12-16 09:14:11] 2025-12-16 14:13:29,889 | INFO     | sizes: {0: 2283161, 1: 2283846, 3: 2283931, 4: 2284045, 5: 2284073, 16: 2284129, 28: 2284285, 39: 2284313, 43: 2284603, 51: 2284631, 32714: 2323196, 32716: 2323475
[2025-12-16 09:14:11] 2025-12-16 14:13:29,889 | INFO     | --------------------------------------------------
[2025-12-16 09:14:11] 2025-12-16 14:13:29,889 | INFO     | 
[2025-12-16 09:14:11] 2025-12-16 14:13:29,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-16 09:14:11] 2025-12-16 14:13:30,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 09:14:11] 2025-12-16 14:13:30,188 | INFO     | job 6929962351 has completed (purged errors)
[2025-12-16 09:14:11] 2025-12-16 14:13:30,189 | INFO     | overall cleanup function is called
[2025-12-16 09:14:11] 2025-12-16 14:13:31,218 | INFO     | --- collectZombieJob: --- 10, [183268]
[2025-12-16 09:14:11] 2025-12-16 14:13:31,218 | INFO     | zombie collector waiting for pid 183268
[2025-12-16 09:14:11] 2025-12-16 14:13:31,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 09:14:11] 2025-12-16 14:13:31,218 | INFO     | collected zombie processes
[2025-12-16 09:14:11] 2025-12-16 14:13:31,219 | INFO     | will attempt to kill all subprocesses of pid=183268
[2025-12-16 09:14:11] 2025-12-16 14:13:31,698 | INFO     | PID=148164 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 09:14:11] 2025-12-16 14:13:31,698 | INFO     | .. there are 17 such processes running
[2025-12-16 09:14:11] 2025-12-16 14:13:31,777 | INFO     | process IDs to be killed: [183268] (in reverse order)
[2025-12-16 09:14:11] 2025-12-16 14:13:32,291 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 09:14:11] 2025-12-16 14:13:32,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 09:14:11] 2025-12-16 14:13:32,385 | INFO     | did not find any defunct processes belonging to 183268
[2025-12-16 09:14:11] 2025-12-16 14:13:32,457 | INFO     | did not find any defunct processes belonging to 183268
[2025-12-16 09:14:11] 2025-12-16 14:13:32,479 | INFO     | ready for new job
[2025-12-16 09:14:11] 2025-12-16 14:13:32,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 09:14:11] 2025-12-16 14:13:32,486 | INFO     | ***************************************
[2025-12-16 09:14:11] 2025-12-16 14:13:32,487 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 09:14:11] 2025-12-16 14:13:32,487 | INFO     | ***************************************
[2025-12-16 09:14:11] 2025-12-16 14:13:32,487 | INFO     | 
[2025-12-16 09:14:11] 2025-12-16 14:13:32,494 | INFO     | architecture information:
[2025-12-16 09:14:11] 2025-12-16 14:13:32,494 | INFO     | executing command: cat /etc/os-release
[2025-12-16 09:14:11] 2025-12-16 14:13:32,554 | INFO     | cat /etc/os-release:
[2025-12-16 09:14:11] NAME="CentOS Linux"
[2025-12-16 09:14:11] VERSION="7 (Core)"
[2025-12-16 09:14:11] ID="centos"
[2025-12-16 09:14:11] ID_LIKE="rhel fedora"
[2025-12-16 09:14:11] VERSION_ID="7"
[2025-12-16 09:14:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 09:14:11] ANSI_COLOR="0;31"
[2025-12-16 09:14:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 09:14:11] HOME_URL="https://www.centos.org/"
[2025-12-16 09:14:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 09:14:11] 
[2025-12-16 09:14:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 09:14:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 09:14:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 09:14:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 09:14:11] 
[2025-12-16 09:14:11] 2025-12-16 14:13:32,554 | INFO     | ***************************************
[2025-12-16 09:14:11] 2025-12-16 14:13:33,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-16 09:14:11] 2025-12-16 14:13:33,205 | INFO     | sufficient remaining disk space (75725012992 B)
[2025-12-16 09:14:11] 2025-12-16 14:13:33,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 09:14:11] 2025-12-16 14:13:33,206 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 09:14:11] 2025-12-16 14:13:33,206 | INFO     | update_server=False
[2025-12-16 09:14:11] 2025-12-16 14:13:33,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 09:14:11] 2025-12-16 14:13:33,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:14:11] 2025-12-16 14:13:33,210 | INFO     | aborting loop
[2025-12-16 09:14:11] 2025-12-16 14:13:33,507 | INFO     | all payload control threads have been joined
[2025-12-16 09:14:11] 2025-12-16 14:13:33,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 09:14:11] 2025-12-16 14:13:33,873 | INFO     | all data control threads have been joined
[2025-12-16 09:14:11] 2025-12-16 14:13:34,212 | INFO     | [job] retrieve thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:34,213 | INFO     | all job control threads have been joined
[2025-12-16 09:14:11] 2025-12-16 14:13:34,216 | INFO     | [job] job monitor thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:34,513 | INFO     | [payload] control thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:34,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:14:11] 2025-12-16 14:13:34,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 09:14:11] 2025-12-16 14:13:34,847 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:34,879 | INFO     | [data] control thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:34,966 | INFO     | [data] copytool_in thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:34,992 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:35,025 | INFO     | [job] validate thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:35,219 | INFO     | [job] control thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:35,384 | INFO     | [payload] failed_post thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:35,453 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:35,563 | INFO     | [payload] validate_post thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:35,652 | INFO     | [job] queue monitor thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:35,682 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:36,708 | INFO     | [data] copytool_out thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:13:37,656 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 09:14:11] 2025-12-16 14:14:03,374 | INFO     | [monitor] cgroup control has ended
[2025-12-16 09:14:11] 2025-12-16 14:14:03,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566584489792)>', '<ExcThread(monitor, started 140565781915392)>']
[2025-12-16 09:14:11] 2025-12-16 14:14:04,611 | INFO     | PID=148164 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 09:14:11] 2025-12-16 14:14:04,611 | INFO     | .. there are 17 such processes running
[2025-12-16 09:14:11] 2025-12-16 14:14:04,612 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 09:14:11] 2025-12-16 14:14:04,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 09:14:11] 2025-12-16 14:14:04,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 09:14:11] 2025-12-16 14:14:04,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 09:14:11] 2025-12-16 14:14:04,613 | INFO     | [monitor] control thread has ended
[2025-12-16 09:14:11] 2025-12-16 14:14:08,888 | INFO     | all workflow threads have been joined
[2025-12-16 09:14:11] 2025-12-16 14:14:08,888 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 09:14:11] 2025-12-16 14:14:08,889 | INFO     | traces error code: 0
[2025-12-16 09:14:11] 2025-12-16 14:14:08,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 09:14:11] 2025-12-16 14:14:09,379 [wrapper] ==== pilot stdout END ====
[2025-12-16 09:14:11] 2025-12-16 14:14:09,416 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 09:14:11] 2025-12-16 14:14:09,457 [wrapper] pilotpid: 148164
[2025-12-16 09:14:11] 2025-12-16 14:14:09,534 [wrapper] Pilot exit status: 0
[2025-12-16 09:14:11] 2025-12-16 14:14:09,671 [wrapper] pandaids: 6929962351
[2025-12-16 09:14:11] 2025-12-16 14:14:10,291 [wrapper] cleanup supervisor_pilot 2001901 148166
[2025-12-16 09:14:11] 2025-12-16 14:14:10,322 [wrapper] Test setup, not cleaning
[2025-12-16 09:14:11] 2025-12-16 14:14:10,362 [wrapper] apfmon messages muted
[2025-12-16 09:14:11] 2025-12-16 14:14:10,406 [wrapper] ==== wrapper stdout END ====
[2025-12-16 09:14:11] 2025-12-16 14:14:10,449 [wrapper] ==== wrapper stderr END ====
[2025-12-16 09:14:11]  *** Error codes and diagnostics ***
[2025-12-16 09:14:11]     "exeErrorCode": 0,
[2025-12-16 09:14:11]     "exeErrorDiag": "",
[2025-12-16 09:14:11]     "pilotErrorCode": 0,
[2025-12-16 09:14:11]     "pilotErrorDiag": "",
[2025-12-16 09:14:11]  *** Listing of results directory ***
[2025-12-16 09:14:11] total 348240
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 13:24 pilot3.tar.gz
[2025-12-16 09:14:11] -rwx------. 1 boincer umatlas     36322 Dec 15 13:25 runpilot2-wrapper.sh
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 13:25 queuedata.json
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas       100 Dec 16 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 09:14:11] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 00:04 run_atlas
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas       105 Dec 16 00:04 job.xml
[2025-12-16 09:14:11] -rw-r--r--. 2 boincer umatlas 193542163 Dec 16 00:04 EVNT.47886829._000351.pool.root.1
[2025-12-16 09:14:11] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:04 start_atlas.sh
[2025-12-16 09:14:11] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 00:04 shared
[2025-12-16 09:14:11] -rw-r--r--. 2 boincer umatlas    592411 Dec 16 00:04 input.tar.gz
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas         0 Dec 16 00:04 boinc_lockfile
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas      2537 Dec 16 00:04 pandaJob.out
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas        57 Dec 16 00:04 setup.sh.local
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas    994531 Dec 16 00:05 agis_schedconf.cvmfs.json
[2025-12-16 09:14:11] drwx------. 5 boincer umatlas      4096 Dec 16 00:06 pilot3
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas 150042146 Dec 16 09:11 HITS.47886831._009271.pool.root.1
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas       531 Dec 16 09:11 boinc_task_state.xml
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas      1042 Dec 16 09:12 memory_monitor_summary.json
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas   1516240 Dec 16 09:12 agis_ddmendpoints.agis.ALL.json
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas    687510 Dec 16 09:12 log.47886831._009271.job.log.tgz.1
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas      7818 Dec 16 09:13 heartbeat.json
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas      6842 Dec 16 09:13 init_data.xml
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas        95 Dec 16 09:14 pilot_heartbeat.json
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 09:14 boinc_mmap_file
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas        28 Dec 16 09:14 wrapper_checkpoint.txt
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas      4823 Dec 16 09:14 pilotlog.txt
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas   3856288 Dec 16 09:14 log.47886831._009271.job.log.1
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas       357 Dec 16 09:14 output.list
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas       620 Dec 16 09:14 runtime_log
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas   4567040 Dec 16 09:14 result.tar.gz
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas      9348 Dec 16 09:14 runtime_log.err
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas       657 Dec 16 09:14 Oh8MDm3QSp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCQYKDmFnevBo.diag
[2025-12-16 09:14:11] -rw-r--r--. 1 boincer umatlas     21249 Dec 16 09:14 stderr.txt
[2025-12-16 09:14:11] HITS file was successfully produced:
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas 150042146 Dec 16 09:11 shared/HITS.pool.root.1
[2025-12-16 09:14:11]  *** Contents of shared directory: ***
[2025-12-16 09:14:11] total 340600
[2025-12-16 09:14:11] -rw-r--r--. 2 boincer umatlas 193542163 Dec 16 00:04 ATLAS.root_0
[2025-12-16 09:14:11] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:04 start_atlas.sh
[2025-12-16 09:14:11] -rw-r--r--. 2 boincer umatlas    592411 Dec 16 00:04 input.tar.gz
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas 150042146 Dec 16 09:11 HITS.pool.root.1
[2025-12-16 09:14:11] -rw-------. 1 boincer umatlas   4567040 Dec 16 09:14 result.tar.gz
09:14:12 (133825): run_atlas exited; CPU time 45586.469366
09:14:12 (133825): called boinc_finish(0)

</stderr_txt>
]]>

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