Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:56 (991326): wrapper (7.7.26015): starting
00:01:56 (991326): wrapper: running run_atlas (--nthreads 9)
[2025-12-16 00:01:56] Arguments: --nthreads 9
[2025-12-16 00:01:56] Threads: 9
[2025-12-16 00:01:56] Checking for CVMFS
[2025-12-16 00:01:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 00:01:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 00:01:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 00:02:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 00:02:00] 2.13.3.0 8702 58266 380760 154058 0 206 18043580 21042176 13134 16776704 0 233606000 99.379 345567892 32286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 00:02:00] CVMFS is ok
[2025-12-16 00:02:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 00:02:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 00:02:00] Further information can be found at the LHC@home message board.
[2025-12-16 00:02:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 00:02:00] Checking for apptainer binary...
[2025-12-16 00:02:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 00:02:00] Running /usr/bin/apptainer --version
[2025-12-16 00:02:00] apptainer version 1.4.5-2.el9
[2025-12-16 00:02:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 00:02:00] c-16-12.aglt2.org
[2025-12-16 00:02:00] apptainer works
[2025-12-16 00:02:00] Set ATHENA_PROC_NUMBER=9
[2025-12-16 00:02:00] Set ATHENA_CORE_NUMBER=9
[2025-12-16 00:02:00] Starting ATLAS job with PandaID=6929961344
[2025-12-16 00:02:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 22:55:49]  *** The last 200 lines of the pilot log: ***
[2025-12-16 22:55:49] 2025-12-17 00:59:31,338 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 22:55:49] 2025-12-17 00:59:31,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 22:55:49] 2025-12-17 00:59:31,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 22:55:49] 2025-12-17 00:59:31,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 22:55:49] 2025-12-17 00:59:31,359 | INFO     | time since job start (71760s) is within the limit (174528.0s)
[2025-12-16 22:55:49] 2025-12-17 00:59:31,400 | INFO     | fitting pss+swap vs Time
[2025-12-16 22:55:49] 2025-12-17 00:59:31,403 | INFO     | sum of square deviations: 499189124065.80414
[2025-12-16 22:55:49] 2025-12-17 00:59:31,921 | INFO     | sum of deviations: 876187072736.7173
[2025-12-16 22:55:49] 2025-12-17 00:59:31,926 | INFO     | mean x: 1765897318.6919794
[2025-12-16 22:55:49] 2025-12-17 00:59:31,926 | INFO     | mean y: 2526818.267918089
[2025-12-16 22:55:49] 2025-12-17 00:59:31,926 | INFO     | intersect: -3097012670.5258737
[2025-12-16 22:55:49] 2025-12-17 00:59:31,928 | INFO     | chi2: 4.912369968403039
[2025-12-16 22:55:49] 2025-12-17 00:59:31,977 | INFO     | monitor loop #2356: job 0:6929961344 is in state 'finished'
[2025-12-16 22:55:49] 2025-12-17 00:59:31,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:55:49] 2025-12-17 00:59:31,985 | INFO     | sum of square deviations: 492827743941.4548
[2025-12-16 22:55:49] 2025-12-17 00:59:32,583 | INFO     | sum of deviations: 1023770741903.9501
[2025-12-16 22:55:49] 2025-12-17 00:59:32,584 | INFO     | mean x: 1765897166.1953728
[2025-12-16 22:55:49] 2025-12-17 00:59:32,584 | INFO     | mean y: 2530346.8423307627
[2025-12-16 22:55:49] 2025-12-17 00:59:32,584 | INFO     | intersect: -3665838315.812922
[2025-12-16 22:55:49] 2025-12-17 00:59:32,586 | INFO     | chi2: 3.512148827829783
[2025-12-16 22:55:49] 2025-12-17 00:59:32,586 | INFO     | current chi2=3.512148827829783 (change=28.503983811879973 %)
[2025-12-16 22:55:49] 2025-12-17 00:59:32,588 | INFO     | sum of square deviations: 486520429979.76324
[2025-12-16 22:55:49] 2025-12-17 00:59:33,082 | INFO     | sum of deviations: 1018358644239.4447
[2025-12-16 22:55:49] 2025-12-17 00:59:33,082 | INFO     | mean x: 1765897013.6962135
[2025-12-16 22:55:49] 2025-12-17 00:59:33,082 | INFO     | mean y: 2530215.987091222
[2025-12-16 22:55:49] 2025-12-17 00:59:33,083 | INFO     | intersect: -3693751333.400179
[2025-12-16 22:55:49] 2025-12-17 00:59:33,113 | INFO     | chi2: 3.51162430610666
[2025-12-16 22:55:49] 2025-12-17 00:59:33,113 | INFO     | current chi2=3.51162430610666 (change=0.014934495912220496 %)
[2025-12-16 22:55:49] 2025-12-17 00:59:33,113 | INFO     | right removable region: 1161
[2025-12-16 22:55:49] 2025-12-17 00:59:33,172 | INFO     | sum of square deviations: 492827034508.67035
[2025-12-16 22:55:49] 2025-12-17 00:59:33,360 | INFO     | sum of deviations: 544266432873.9093
[2025-12-16 22:55:49] 2025-12-17 00:59:33,364 | INFO     | mean x: 1765897471.1970866
[2025-12-16 22:55:49] 2025-12-17 00:59:33,364 | INFO     | mean y: 2534769.443873179
[2025-12-16 22:55:49] 2025-12-17 00:59:33,364 | INFO     | intersect: -1947680316.5196915
[2025-12-16 22:55:49] 2025-12-17 00:59:33,366 | INFO     | chi2: 2.0022295615087966
[2025-12-16 22:55:49] 2025-12-17 00:59:33,366 | INFO     | current chi2=2.0022295615087966 (change=59.24106746056626 %)
[2025-12-16 22:55:49] 2025-12-17 00:59:33,372 | INFO     | sum of square deviations: 486519367781.7793
[2025-12-16 22:55:49] 2025-12-17 00:59:33,445 | INFO     | sum of deviations: 432690033704.986
[2025-12-16 22:55:49] 2025-12-17 00:59:33,446 | INFO     | mean x: 1765897623.7005165
[2025-12-16 22:55:49] 2025-12-17 00:59:33,446 | INFO     | mean y: 2537465.856282272
[2025-12-16 22:55:49] 2025-12-17 00:59:33,446 | INFO     | intersect: -1567978227.6962306
[2025-12-16 22:55:49] 2025-12-17 00:59:33,447 | INFO     | chi2: 1.7125076642990291
[2025-12-16 22:55:49] 2025-12-17 00:59:33,448 | INFO     | current chi2=1.7125076642990291 (change=14.46996402307861 %)
[2025-12-16 22:55:49] 2025-12-17 00:59:33,448 | INFO     | left removable region: 20
[2025-12-16 22:55:49] 2025-12-17 00:59:33,449 | INFO     | sum of square deviations: 460615792702.673
[2025-12-16 22:55:49] 2025-12-17 00:59:33,495 | INFO     | sum of deviations: 439698791172.21936
[2025-12-16 22:55:49] 2025-12-17 00:59:33,496 | INFO     | mean x: 1765897593.2120945
[2025-12-16 22:55:49] 2025-12-17 00:59:33,496 | INFO     | mean y: 2544390.230499562
[2025-12-16 22:55:49] 2025-12-17 00:59:33,496 | INFO     | intersect: -1683162112.6086152
[2025-12-16 22:55:49] 2025-12-17 00:59:33,498 | INFO     | chi2: 0.09737092757854734
[2025-12-16 22:55:49] 2025-12-17 00:59:33,498 | INFO     | current memory leak: 0.95 B/s (using 1141 data points, chi2=0.10)
[2025-12-16 22:55:49] 2025-12-17 00:59:33,499 | INFO     | could have reported an average CPU frequency of 2899 MHz (42 samples)
[2025-12-16 22:55:49] 2025-12-17 00:59:33,500 | INFO     | ..............................
[2025-12-16 22:55:49] 2025-12-17 00:59:33,500 | INFO     | . Timing measurements:
[2025-12-16 22:55:49] 2025-12-17 00:59:33,500 | INFO     | . get job = 1 s
[2025-12-16 22:55:49] 2025-12-17 00:59:33,500 | INFO     | . initial setup = 9 s
[2025-12-16 22:55:49] 2025-12-17 00:59:33,500 | INFO     | . payload setup = 53 s
[2025-12-16 22:55:49] 2025-12-17 00:59:33,500 | INFO     | . stage-in = 1 s
[2025-12-16 22:55:49] 2025-12-17 00:59:33,500 | INFO     | . payload execution = 71514 s
[2025-12-16 22:55:49] 2025-12-17 00:59:33,501 | INFO     | . stage-out = 19 s
[2025-12-16 22:55:49] 2025-12-17 00:59:33,501 | INFO     | . log creation = 7 s
[2025-12-16 22:55:49] 2025-12-17 00:59:33,501 | INFO     | ..............................
[2025-12-16 22:55:49] 2025-12-17 00:59:33,786 | INFO     | time since job start (71762s) is within the limit (174528.0s)
[2025-12-16 22:55:49] 2025-12-17 00:59:34,039 | INFO     | 
[2025-12-16 22:55:49] 2025-12-17 00:59:34,040 | INFO     | job summary report
[2025-12-16 22:55:49] 2025-12-17 00:59:34,040 | INFO     | --------------------------------------------------
[2025-12-16 22:55:49] 2025-12-17 00:59:34,040 | INFO     | PanDA job id: 6929961344
[2025-12-16 22:55:49] 2025-12-17 00:59:34,040 | INFO     | task id: 47886831
[2025-12-16 22:55:49] 2025-12-17 00:59:34,040 | INFO     | errors: (none)
[2025-12-16 22:55:49] 2025-12-17 00:59:34,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 22:55:49] 2025-12-17 00:59:34,041 | INFO     | pilot state: finished 
[2025-12-16 22:55:49] 2025-12-17 00:59:34,041 | INFO     | transexitcode: 0
[2025-12-16 22:55:49] 2025-12-17 00:59:34,041 | INFO     | exeerrorcode: 0
[2025-12-16 22:55:49] 2025-12-17 00:59:34,041 | INFO     | exeerrordiag: 
[2025-12-16 22:55:49] 2025-12-17 00:59:34,041 | INFO     | exitcode: 0
[2025-12-16 22:55:49] 2025-12-17 00:59:34,041 | INFO     | exitmsg: OK
[2025-12-16 22:55:49] 2025-12-17 00:59:34,042 | INFO     | cpuconsumptiontime: 84540 s
[2025-12-16 22:55:49] 2025-12-17 00:59:34,042 | INFO     | nevents: 400
[2025-12-16 22:55:49] 2025-12-17 00:59:34,042 | INFO     | neventsw: 0
[2025-12-16 22:55:49] 2025-12-17 00:59:34,042 | INFO     | pid: 1030491
[2025-12-16 22:55:49] 2025-12-17 00:59:34,042 | INFO     | pgrp: 1030491
[2025-12-16 22:55:49] 2025-12-17 00:59:34,042 | INFO     | corecount: 9
[2025-12-16 22:55:49] 2025-12-17 00:59:34,042 | INFO     | event service: False
[2025-12-16 22:55:49] 2025-12-17 00:59:34,043 | INFO     | sizes: {0: 2283161, 1: 2283762, 2: 2283846, 4: 2284073, 5: 2284129, 17: 2284129, 28: 2284285, 39: 2284313, 41: 2284603, 50: 2284631, 71575: 2336129, 71579: 2336408
[2025-12-16 22:55:49] 2025-12-17 00:59:34,056 | INFO     | --------------------------------------------------
[2025-12-16 22:55:49] 2025-12-17 00:59:34,056 | INFO     | 
[2025-12-16 22:55:49] 2025-12-17 00:59:34,056 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 22:55:49] 2025-12-17 00:59:34,459 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,459 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,459 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,460 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 22:55:49] 2025-12-17 00:59:34,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,479 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 22:55:49] 2025-12-17 00:59:34,480 | INFO     | job 6929961344 has completed (purged errors)
[2025-12-16 22:55:49] 2025-12-17 00:59:34,480 | INFO     | overall cleanup function is called
[2025-12-16 22:55:49] 2025-12-17 00:59:35,539 | INFO     | --- collectZombieJob: --- 10, [1030491]
[2025-12-16 22:55:49] 2025-12-17 00:59:35,539 | INFO     | zombie collector waiting for pid 1030491
[2025-12-16 22:55:49] 2025-12-17 00:59:35,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 22:55:49] 2025-12-17 00:59:35,539 | INFO     | collected zombie processes
[2025-12-16 22:55:49] 2025-12-17 00:59:35,540 | INFO     | will attempt to kill all subprocesses of pid=1030491
[2025-12-16 22:55:49] 2025-12-17 00:59:40,409 | INFO     | process IDs to be killed: [1030491] (in reverse order)
[2025-12-16 22:55:49] 2025-12-17 00:59:40,937 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 22:55:49] 2025-12-17 00:59:40,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 22:55:49] 2025-12-17 00:59:41,357 | INFO     | did not find any defunct processes belonging to 1030491
[2025-12-16 22:55:49] 2025-12-17 00:59:41,629 | INFO     | did not find any defunct processes belonging to 1030491
[2025-12-16 22:55:49] 2025-12-17 00:59:41,630 | INFO     | ready for new job
[2025-12-16 22:55:49] 2025-12-17 00:59:41,630 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 22:55:49] 2025-12-17 00:59:41,646 | INFO     | ***************************************
[2025-12-16 22:55:49] 2025-12-17 00:59:41,646 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 22:55:49] 2025-12-17 00:59:41,647 | INFO     | ***************************************
[2025-12-16 22:55:49] 2025-12-17 00:59:41,659 | INFO     | 
[2025-12-16 22:55:49] 2025-12-17 00:59:41,661 | INFO     | architecture information:
[2025-12-16 22:55:49] 2025-12-17 00:59:41,665 | INFO     | executing command: cat /etc/os-release
[2025-12-16 22:55:49] 2025-12-17 00:59:41,835 | INFO     | cat /etc/os-release:
[2025-12-16 22:55:49] NAME="CentOS Linux"
[2025-12-16 22:55:49] VERSION="7 (Core)"
[2025-12-16 22:55:49] ID="centos"
[2025-12-16 22:55:49] ID_LIKE="rhel fedora"
[2025-12-16 22:55:49] VERSION_ID="7"
[2025-12-16 22:55:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 22:55:49] ANSI_COLOR="0;31"
[2025-12-16 22:55:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 22:55:49] HOME_URL="https://www.centos.org/"
[2025-12-16 22:55:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 22:55:49] 
[2025-12-16 22:55:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 22:55:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 22:55:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 22:55:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 22:55:49] 
[2025-12-16 22:55:49] 2025-12-17 00:59:41,835 | INFO     | ***************************************
[2025-12-16 22:55:49] 2025-12-17 00:59:42,339 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 22:55:49] 2025-12-17 00:59:42,397 | INFO     | sufficient remaining disk space (51786022912 B)
[2025-12-16 22:55:49] 2025-12-17 00:59:42,398 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 22:55:49] 2025-12-17 00:59:42,398 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 22:55:49] 2025-12-17 00:59:42,398 | INFO     | update_server=False
[2025-12-16 22:55:49] 2025-12-17 00:59:42,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 22:55:49] 2025-12-17 00:59:42,399 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 22:55:49] 2025-12-17 00:59:42,494 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 22:55:49] 2025-12-17 00:59:42,494 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 22:55:49] 2025-12-17 00:59:42,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:55:49] 2025-12-17 00:59:42,495 | INFO     | will abort loop
[2025-12-16 22:55:49] 2025-12-17 00:59:43,089 | INFO     | all data control threads have been joined
[2025-12-16 22:55:49] 2025-12-17 00:59:43,310 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 22:55:49] 2025-12-17 00:59:43,324 | INFO     | all job control threads have been joined
[2025-12-16 22:55:49] 2025-12-17 00:59:43,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:55:49] 2025-12-17 00:59:43,404 | INFO     | [job] retrieve thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:43,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:43,423 | INFO     | [payload] validate_post thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:43,434 | INFO     | [job] validate thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:43,501 | INFO     | [job] job monitor thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:43,503 | INFO     | [payload] failed_post thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:43,624 | INFO     | all payload control threads have been joined
[2025-12-16 22:55:49] 2025-12-17 00:59:43,862 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:43,866 | INFO     | [data] copytool_in thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:43,945 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:44,096 | INFO     | [data] control thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:44,330 | INFO     | [job] control thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:44,405 | INFO     | [job] queue monitor thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:44,406 | INFO     | [data] copytool_out thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:44,638 | INFO     | [payload] control thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:44,898 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 22:55:49] 2025-12-17 00:59:47,387 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 22:55:49] 2025-12-17 01:00:16,576 | INFO     | PID=1002968 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 22:55:49] 2025-12-17 01:00:16,580 | INFO     | .. there are 23 such processes running
[2025-12-16 22:55:49] 2025-12-17 01:00:16,581 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 22:55:49] 2025-12-17 01:00:16,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 22:55:49] 2025-12-17 01:00:16,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 22:55:49] 2025-12-17 01:00:25,305 | INFO     | [monitor] cgroup control has ended
[2025-12-16 22:55:49] 2025-12-17 01:00:26,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129058481984)>', '<ExcThread(monitor, started 140128341194496)>']
[2025-12-16 22:55:49] 2025-12-17 01:00:26,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 22:55:49] 2025-12-17 01:00:26,679 | INFO     | [monitor] control thread has ended
[2025-12-16 22:55:49] 2025-12-17 01:00:31,640 | INFO     | all workflow threads have been joined
[2025-12-16 22:55:49] 2025-12-17 01:00:31,640 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 22:55:49] 2025-12-17 01:00:31,641 | INFO     | traces error code: 0
[2025-12-16 22:55:49] 2025-12-17 01:00:31,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 22:55:49] 2025-12-17 01:00:34,351 [wrapper] ==== pilot stdout END ====
[2025-12-16 22:55:49] 2025-12-17 01:00:34,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 22:55:49] 2025-12-17 01:00:34,434 [wrapper] pilotpid: 1002968
[2025-12-16 22:55:49] 2025-12-17 01:00:34,474 [wrapper] Pilot exit status: 0
[2025-12-16 22:55:49] 2025-12-17 01:00:34,811 [wrapper] pandaids: 6929961344
[2025-12-16 22:55:49] 2025-12-17 01:00:36,829 [wrapper] cleanup supervisor_pilot  491678 1002969
[2025-12-16 22:55:49] 2025-12-17 01:00:36,937 [wrapper] Test setup, not cleaning
[2025-12-16 22:55:49] 2025-12-17 01:00:37,005 [wrapper] apfmon messages muted
[2025-12-16 22:55:49] 2025-12-17 01:00:37,066 [wrapper] ==== wrapper stdout END ====
[2025-12-16 22:55:49] 2025-12-17 01:00:37,152 [wrapper] ==== wrapper stderr END ====
[2025-12-16 22:55:49]  *** Error codes and diagnostics ***
[2025-12-16 22:55:49]     "exeErrorCode": 0,
[2025-12-16 22:55:49]     "exeErrorDiag": "",
[2025-12-16 22:55:49]     "pilotErrorCode": 0,
[2025-12-16 22:55:49]     "pilotErrorDiag": "",
[2025-12-16 22:55:49]  *** Listing of results directory ***
[2025-12-16 22:55:49] total 342432
[2025-12-16 22:55:49] -rwx------. 1 boincer umatlas     36322 Dec 15 13:24 runpilot2-wrapper.sh
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 13:24 pilot3.tar.gz
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 13:24 queuedata.json
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas       100 Dec 16 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 22:55:49] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 00:01 run_atlas
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas       105 Dec 16 00:01 job.xml
[2025-12-16 22:55:49] -rw-r--r--. 2 boincer umatlas 189117033 Dec 16 00:01 EVNT.47886829._000337.pool.root.1
[2025-12-16 22:55:49] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:01 start_atlas.sh
[2025-12-16 22:55:49] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 00:01 shared
[2025-12-16 22:55:49] -rw-r--r--. 2 boincer umatlas    592407 Dec 16 00:01 input.tar.gz
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas         0 Dec 16 00:01 boinc_lockfile
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas      2537 Dec 16 00:02 pandaJob.out
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas        57 Dec 16 00:02 setup.sh.local
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas    994531 Dec 16 00:03 agis_schedconf.cvmfs.json
[2025-12-16 22:55:49] drwx------. 5 boincer umatlas      4096 Dec 16 00:03 pilot3
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas 143461768 Dec 16 19:55 HITS.47886831._008882.pool.root.1
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas       530 Dec 16 19:56 boinc_task_state.xml
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas      1038 Dec 16 19:57 memory_monitor_summary.json
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas   1516240 Dec 16 19:58 agis_ddmendpoints.agis.ALL.json
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas    995269 Dec 16 19:58 log.47886831._008882.job.log.tgz.1
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas      7814 Dec 16 19:59 heartbeat.json
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas        95 Dec 16 20:00 pilot_heartbeat.json
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas      5010 Dec 16 20:00 pilotlog.txt
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas   6078792 Dec 16 20:00 log.47886831._008882.job.log.1
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas       357 Dec 16 20:00 output.list
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas       620 Dec 16 20:00 runtime_log
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas   7096320 Dec 16 20:00 result.tar.gz
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas      9338 Dec 16 20:00 runtime_log.err
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas       657 Dec 16 20:00 KHhNDmmQSp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyvTKDmEnoMQo.diag
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas      6522 Dec 16 22:55 init_data.xml
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 22:55 boinc_mmap_file
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas        27 Dec 16 22:55 wrapper_checkpoint.txt
[2025-12-16 22:55:49] -rw-r--r--. 1 boincer umatlas     21220 Dec 16 22:55 stderr.txt
[2025-12-16 22:55:49] HITS file was successfully produced:
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas 143461768 Dec 16 19:55 shared/HITS.pool.root.1
[2025-12-16 22:55:49]  *** Contents of shared directory: ***
[2025-12-16 22:55:49] total 332320
[2025-12-16 22:55:49] -rw-r--r--. 2 boincer umatlas 189117033 Dec 16 00:01 ATLAS.root_0
[2025-12-16 22:55:49] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:01 start_atlas.sh
[2025-12-16 22:55:49] -rw-r--r--. 2 boincer umatlas    592407 Dec 16 00:01 input.tar.gz
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas 143461768 Dec 16 19:55 HITS.pool.root.1
[2025-12-16 22:55:49] -rw-------. 1 boincer umatlas   7096320 Dec 16 20:00 result.tar.gz
22:56:10 (991326): run_atlas exited; CPU time 87185.176384
22:56:10 (991326): called boinc_finish(0)

</stderr_txt>
]]>

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