Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:32:56 (9109): wrapper (7.7.26015): starting
23:32:56 (9109): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 23:32:56] Arguments: --nthreads 12
[2025-12-15 23:32:56] Threads: 12
[2025-12-15 23:32:56] Checking for CVMFS
[2025-12-15 23:32:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 23:32:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 23:32:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 23:32:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 23:32:56] 2.11.2.0 2998 131719 96604 154058 2 56 11796046 20275200 1 130560 0 56092353 99.957 5819434 35477 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 23:32:56] CVMFS is ok
[2025-12-15 23:32:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 23:32:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 23:32:56] Further information can be found at the LHC@home message board.
[2025-12-15 23:32:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 23:32:56] Checking for apptainer binary...
[2025-12-15 23:32:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 23:32:56] Running /usr/bin/apptainer --version
[2025-12-15 23:32:56] apptainer version 1.3.2-1.el7
[2025-12-15 23:32:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 23:32:57] c-205-12.aglt2.org
[2025-12-15 23:32:57] apptainer works
[2025-12-15 23:32:57] Set ATHENA_PROC_NUMBER=12
[2025-12-15 23:32:57] Set ATHENA_CORE_NUMBER=12
[2025-12-15 23:32:57] Starting ATLAS job with PandaID=6929808971
[2025-12-15 23:32:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 01:13:30]  *** The last 200 lines of the pilot log: ***
[2025-12-16 01:13:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-16 01:13:30]  replicas=None
[2025-12-16 01:13:30]  scope=mc23_13p6TeV
[2025-12-16 01:13:30]  status=None
[2025-12-16 01:13:30]  status_code=0
[2025-12-16 01:13:30]  storage_token=
[2025-12-16 01:13:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929808971/log.47898826._002755.job.log.tgz.1
[2025-12-16 01:13:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/21/log.47898826._002755.job.log.tgz.1
[2025-12-16 01:13:30]  workdir=None
[2025-12-16 01:13:30] ]
[2025-12-16 01:13:30] 2025-12-16 06:12:51,221 | INFO     | time since job start (5979s) is within the limit (174528.0s)
[2025-12-16 01:13:30] 2025-12-16 06:12:51,222 | INFO     | transferring file log.47898826._002755.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929808971/log.47898826._002755.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-16 01:13:30] 2025-12-16 06:12:51,222 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929808971/log.47898826._002755.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._002755.job
[2025-12-16 01:13:30] 2025-12-16 06:12:51,245 | INFO     | adding to output.list: log.47898826._002755.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/21/log.47898826._002755.job.log.tg
[2025-12-16 01:13:30] 2025-12-16 06:12:51,246 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-16 01:13:30] 2025-12-16 06:12:51,246 | INFO     | summary of transferred files:
[2025-12-16 01:13:30] 2025-12-16 06:12:51,246 | INFO     |  -- lfn=log.47898826._002755.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 01:13:30] 2025-12-16 06:12:51,246 | INFO     | stage-out finished correctly
[2025-12-16 01:13:30] 2025-12-16 06:12:51,328 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 01:13:30] 2025-12-16 06:12:51,465 | WARNING  | process 19207 can no longer be monitored (due to stat problems) - aborting
[2025-12-16 01:13:30] 2025-12-16 06:12:51,465 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929808971/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 01:13:30] 2025-12-16 06:12:51,559 | INFO     | number of running child processes to parent process 19207: 1
[2025-12-16 01:13:30] 2025-12-16 06:12:51,559 | INFO     | maximum number of monitored processes: 6
[2025-12-16 01:13:30] 2025-12-16 06:12:51,864 | INFO     | job 6929808971 has state=finished
[2025-12-16 01:13:30] 2025-12-16 06:12:51,864 | INFO     | preparing for final server update for job 6929808971 in state='finished'
[2025-12-16 01:13:30] 2025-12-16 06:12:51,865 | INFO     | this job has now completed (state=finished)
[2025-12-16 01:13:30] 2025-12-16 06:12:51,865 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 01:13:30] 2025-12-16 06:12:51,865 | INFO     | log transfer has been attempted: DONE
[2025-12-16 01:13:30] 2025-12-16 06:12:51,866 | INFO     | job 6929808971 has finished - writing final server update
[2025-12-16 01:13:30] 2025-12-16 06:12:51,866 | INFO     | total number of processed events: 400 (read)
[2025-12-16 01:13:30] 2025-12-16 06:12:51,867 | INFO     | executing command: lscpu
[2025-12-16 01:13:30] 2025-12-16 06:12:51,894 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 01:13:30] 2025-12-16 06:12:53,227 | INFO     | time since job start (5981s) is within the limit (174528.0s)
[2025-12-16 01:13:30] 2025-12-16 06:12:54,062 | INFO     | monitor loop #441: job 0:6929808971 is in state 'finished'
[2025-12-16 01:13:30] 2025-12-16 06:12:54,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 01:13:30] 2025-12-16 06:12:55,234 | INFO     | time since job start (5983s) is within the limit (174528.0s)
[2025-12-16 01:13:30] 2025-12-16 06:12:56,565 | INFO     | monitor loop #442: job 0:6929808971 is in state 'finished'
[2025-12-16 01:13:30] 2025-12-16 06:12:56,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 01:13:30] 2025-12-16 06:12:57,239 | INFO     | time since job start (5985s) is within the limit (174528.0s)
[2025-12-16 01:13:30] 2025-12-16 06:12:57,742 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 01:13:30] 2025-12-16 06:12:57,747 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-16 01:13:30] 2025-12-16 06:12:57,750 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929808971/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 01:13:30] 2025-12-16 06:12:57,751 | INFO     | extracted standard info from prmon json
[2025-12-16 01:13:30] 2025-12-16 06:12:57,751 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 01:13:30] 2025-12-16 06:12:57,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 01:13:30] 2025-12-16 06:12:57,751 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 01:13:30] 2025-12-16 06:12:57,752 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 01:13:30] 2025-12-16 06:12:57,754 | INFO     | fitting pss+swap vs Time
[2025-12-16 01:13:30] 2025-12-16 06:12:57,754 | INFO     | sum of square deviations: 233641590.0
[2025-12-16 01:13:30] 2025-12-16 06:12:57,755 | INFO     | sum of deviations: -15146156528.0
[2025-12-16 01:13:30] 2025-12-16 06:12:57,755 | INFO     | mean x: 1765862672.0
[2025-12-16 01:13:30] 2025-12-16 06:12:57,755 | INFO     | mean y: 2791565.186813187
[2025-12-16 01:13:30] 2025-12-16 06:12:57,755 | INFO     | intersect: 114477412445.2464
[2025-12-16 01:13:30] 2025-12-16 06:12:57,756 | INFO     | chi2: 0.07293943004296928
[2025-12-16 01:13:30] 2025-12-16 06:12:57,756 | INFO     | current memory leak: -64.83 B/s (using 91 data points, chi2=0.07)
[2025-12-16 01:13:30] 2025-12-16 06:12:57,756 | INFO     | could have reported an average CPU frequency of 2122 MHz (7 samples)
[2025-12-16 01:13:30] 2025-12-16 06:12:57,756 | INFO     | ..............................
[2025-12-16 01:13:30] 2025-12-16 06:12:57,756 | INFO     | . Timing measurements:
[2025-12-16 01:13:30] 2025-12-16 06:12:57,757 | INFO     | . get job = 0 s
[2025-12-16 01:13:30] 2025-12-16 06:12:57,757 | INFO     | . initial setup = 2 s
[2025-12-16 01:13:30] 2025-12-16 06:12:57,757 | INFO     | . payload setup = 7 s
[2025-12-16 01:13:30] 2025-12-16 06:12:57,757 | INFO     | . stage-in = 0 s
[2025-12-16 01:13:30] 2025-12-16 06:12:57,757 | INFO     | . payload execution = 5949 s
[2025-12-16 01:13:30] 2025-12-16 06:12:57,757 | INFO     | . stage-out = 0 s
[2025-12-16 01:13:30] 2025-12-16 06:12:57,757 | INFO     | . log creation = 0 s
[2025-12-16 01:13:30] 2025-12-16 06:12:57,757 | INFO     | ..............................
[2025-12-16 01:13:30] 2025-12-16 06:12:58,176 | INFO     | 
[2025-12-16 01:13:30] 2025-12-16 06:12:58,176 | INFO     | job summary report
[2025-12-16 01:13:30] 2025-12-16 06:12:58,176 | INFO     | --------------------------------------------------
[2025-12-16 01:13:30] 2025-12-16 06:12:58,177 | INFO     | PanDA job id: 6929808971
[2025-12-16 01:13:30] 2025-12-16 06:12:58,177 | INFO     | task id: 47898826
[2025-12-16 01:13:30] 2025-12-16 06:12:58,177 | INFO     | errors: (none)
[2025-12-16 01:13:30] 2025-12-16 06:12:58,177 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 01:13:30] 2025-12-16 06:12:58,177 | INFO     | pilot state: finished 
[2025-12-16 01:13:30] 2025-12-16 06:12:58,177 | INFO     | transexitcode: 0
[2025-12-16 01:13:30] 2025-12-16 06:12:58,178 | INFO     | exeerrorcode: 0
[2025-12-16 01:13:30] 2025-12-16 06:12:58,178 | INFO     | exeerrordiag: 
[2025-12-16 01:13:30] 2025-12-16 06:12:58,178 | INFO     | exitcode: 0
[2025-12-16 01:13:30] 2025-12-16 06:12:58,178 | INFO     | exitmsg: OK
[2025-12-16 01:13:30] 2025-12-16 06:12:58,178 | INFO     | cpuconsumptiontime: 66642 s
[2025-12-16 01:13:30] 2025-12-16 06:12:58,178 | INFO     | nevents: 400
[2025-12-16 01:13:30] 2025-12-16 06:12:58,179 | INFO     | neventsw: 0
[2025-12-16 01:13:30] 2025-12-16 06:12:58,179 | INFO     | pid: 19207
[2025-12-16 01:13:30] 2025-12-16 06:12:58,179 | INFO     | pgrp: 19207
[2025-12-16 01:13:30] 2025-12-16 06:12:58,179 | INFO     | corecount: 12
[2025-12-16 01:13:30] 2025-12-16 06:12:58,179 | INFO     | event service: False
[2025-12-16 01:13:30] 2025-12-16 06:12:58,179 | INFO     | sizes: {0: 2283791, 1: 2283990, 5: 2284252, 11: 2284308, 5960: 2311029, 5962: 2320211, 5969: 2320349}
[2025-12-16 01:13:30] 2025-12-16 06:12:58,180 | INFO     | --------------------------------------------------
[2025-12-16 01:13:30] 2025-12-16 06:12:58,180 | INFO     | 
[2025-12-16 01:13:30] 2025-12-16 06:12:58,180 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 01:13:30] 2025-12-16 06:12:58,203 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,204 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,206 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,206 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 01:13:30] 2025-12-16 06:12:58,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,207 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 01:13:30] 2025-12-16 06:12:58,207 | INFO     | job 6929808971 has completed (purged errors)
[2025-12-16 01:13:30] 2025-12-16 06:12:58,207 | INFO     | overall cleanup function is called
[2025-12-16 01:13:30] 2025-12-16 06:12:59,215 | INFO     | --- collectZombieJob: --- 10, [19207]
[2025-12-16 01:13:30] 2025-12-16 06:12:59,215 | INFO     | zombie collector waiting for pid 19207
[2025-12-16 01:13:30] 2025-12-16 06:12:59,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 01:13:30] 2025-12-16 06:12:59,215 | INFO     | collected zombie processes
[2025-12-16 01:13:30] 2025-12-16 06:12:59,215 | INFO     | will attempt to kill all subprocesses of pid=19207
[2025-12-16 01:13:30] 2025-12-16 06:12:59,310 | INFO     | process IDs to be killed: [19207] (in reverse order)
[2025-12-16 01:13:30] 2025-12-16 06:12:59,360 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 01:13:30] 2025-12-16 06:12:59,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 01:13:30] 2025-12-16 06:12:59,363 | INFO     | did not find any defunct processes belonging to 19207
[2025-12-16 01:13:30] 2025-12-16 06:12:59,366 | INFO     | did not find any defunct processes belonging to 19207
[2025-12-16 01:13:30] 2025-12-16 06:12:59,367 | INFO     | ready for new job
[2025-12-16 01:13:30] 2025-12-16 06:12:59,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 01:13:30] 2025-12-16 06:12:59,369 | INFO     | ***************************************
[2025-12-16 01:13:30] 2025-12-16 06:12:59,369 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 01:13:30] 2025-12-16 06:12:59,369 | INFO     | ***************************************
[2025-12-16 01:13:30] 2025-12-16 06:12:59,369 | INFO     | 
[2025-12-16 01:13:30] 2025-12-16 06:12:59,370 | INFO     | architecture information:
[2025-12-16 01:13:30] 2025-12-16 06:12:59,371 | INFO     | executing command: cat /etc/os-release
[2025-12-16 01:13:30] 2025-12-16 06:12:59,385 | INFO     | cat /etc/os-release:
[2025-12-16 01:13:30] NAME="CentOS Linux"
[2025-12-16 01:13:30] VERSION="7 (Core)"
[2025-12-16 01:13:30] ID="centos"
[2025-12-16 01:13:30] ID_LIKE="rhel fedora"
[2025-12-16 01:13:30] VERSION_ID="7"
[2025-12-16 01:13:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 01:13:30] ANSI_COLOR="0;31"
[2025-12-16 01:13:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 01:13:30] HOME_URL="https://www.centos.org/"
[2025-12-16 01:13:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 01:13:30] 
[2025-12-16 01:13:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 01:13:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 01:13:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 01:13:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 01:13:30] 
[2025-12-16 01:13:30] 2025-12-16 06:12:59,386 | INFO     | ***************************************
[2025-12-16 01:13:30] 2025-12-16 06:12:59,889 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 01:13:30] 2025-12-16 06:12:59,906 | INFO     | sufficient remaining disk space (29313990656 B)
[2025-12-16 01:13:30] 2025-12-16 06:12:59,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 01:13:30] 2025-12-16 06:12:59,907 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 01:13:30] 2025-12-16 06:12:59,907 | INFO     | update_server=False
[2025-12-16 01:13:30] 2025-12-16 06:12:59,907 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 01:13:30] 2025-12-16 06:12:59,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 01:13:30] 2025-12-16 06:13:00,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 01:13:30] 2025-12-16 06:13:00,071 | INFO     | aborting loop
[2025-12-16 01:13:30] 2025-12-16 06:13:00,206 | INFO     | all data control threads have been joined
[2025-12-16 01:13:30] 2025-12-16 06:13:00,884 | INFO     | all job control threads have been joined
[2025-12-16 01:13:30] 2025-12-16 06:13:00,908 | INFO     | [job] retrieve thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,042 | INFO     | [data] copytool_in thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,066 | INFO     | [payload] failed_post thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,076 | INFO     | [job] job monitor thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,106 | INFO     | all payload control threads have been joined
[2025-12-16 01:13:30] 2025-12-16 06:13:01,170 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,207 | INFO     | [data] control thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,272 | INFO     | [payload] validate_post thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,547 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,889 | INFO     | [job] control thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,912 | INFO     | [data] copytool_out thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:01,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 01:13:30] 2025-12-16 06:13:02,110 | INFO     | [payload] control thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:02,124 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:02,125 | INFO     | [job] validate thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:02,846 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 01:13:30] 2025-12-16 06:13:03,851 | INFO     | [job] queue monitor thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:05,923 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 01:13:30] 2025-12-16 06:13:21,939 | INFO     | [monitor] cgroup control has ended
[2025-12-16 01:13:30] 2025-12-16 06:13:23,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212586141504)>', '<ExcThread(monitor, started 140211623294720)>']
[2025-12-16 01:13:30] 2025-12-16 06:13:28,798 | INFO     | all workflow threads have been joined
[2025-12-16 01:13:30] 2025-12-16 06:13:28,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 01:13:30] 2025-12-16 06:13:28,807 | INFO     | traces error code: 0
[2025-12-16 01:13:30] 2025-12-16 06:13:28,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 01:13:30] 2025-12-16 06:13:30,438 | INFO     | PID=12831 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 01:13:30] 2025-12-16 06:13:30,438 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 01:13:30] 2025-12-16 06:13:30,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 01:13:30] 2025-12-16 06:13:30,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 01:13:30] 2025-12-16 06:13:30,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 01:13:30] 2025-12-16 06:13:30,439 | INFO     | [monitor] control thread has ended
[2025-12-16 01:13:30] 2025-12-16 06:13:30,534 [wrapper] ==== pilot stdout END ====
[2025-12-16 01:13:30] 2025-12-16 06:13:30,538 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 01:13:30] 2025-12-16 06:13:30,542 [wrapper] pilotpid: 12831
[2025-12-16 01:13:30] 2025-12-16 06:13:30,546 [wrapper] Pilot exit status: 0
[2025-12-16 01:13:30] 2025-12-16 06:13:30,561 [wrapper] pandaids: 6929808971
[2025-12-16 01:13:30] 2025-12-16 06:13:30,603 [wrapper] cleanup supervisor_pilot 20143 12832
[2025-12-16 01:13:30] 2025-12-16 06:13:30,606 [wrapper] Test setup, not cleaning
[2025-12-16 01:13:30] 2025-12-16 06:13:30,610 [wrapper] apfmon messages muted
[2025-12-16 01:13:30] 2025-12-16 06:13:30,614 [wrapper] ==== wrapper stdout END ====
[2025-12-16 01:13:30] 2025-12-16 06:13:30,617 [wrapper] ==== wrapper stderr END ====
[2025-12-16 01:13:30]  *** Error codes and diagnostics ***
[2025-12-16 01:13:30]     "exeErrorCode": 0,
[2025-12-16 01:13:30]     "exeErrorDiag": "",
[2025-12-16 01:13:30]     "pilotErrorCode": 0,
[2025-12-16 01:13:30]     "pilotErrorDiag": "",
[2025-12-16 01:13:30]  *** Listing of results directory ***
[2025-12-16 01:13:30] total 444416
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 13:24 pilot3.tar.gz
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 13:25 queuedata.json
[2025-12-16 01:13:30] -rwx------ 1 boincer umatlas     36322 Dec 15 13:25 runpilot2-wrapper.sh
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas       100 Dec 15 23:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 01:13:30] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 23:32 run_atlas
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas       105 Dec 15 23:32 job.xml
[2025-12-16 01:13:30] -rw-r--r-- 2 boincer umatlas 225099007 Dec 15 23:32 EVNT.47898824._000169.pool.root.1
[2025-12-16 01:13:30] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 23:32 start_atlas.sh
[2025-12-16 01:13:30] drwxrwx--x 2 boincer umatlas      4096 Dec 15 23:32 shared
[2025-12-16 01:13:30] -rw-r--r-- 2 boincer umatlas    592388 Dec 15 23:32 input.tar.gz
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas         0 Dec 15 23:32 boinc_lockfile
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas      2514 Dec 15 23:32 pandaJob.out
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas        57 Dec 15 23:32 setup.sh.local
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas    994531 Dec 15 23:33 agis_schedconf.cvmfs.json
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas   1516240 Dec 15 23:33 agis_ddmendpoints.agis.ALL.json
[2025-12-16 01:13:30] drwx------ 5 boincer umatlas      4096 Dec 15 23:33 pilot3
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas      5953 Dec 16 01:11 init_data.xml
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas       529 Dec 16 01:12 boinc_task_state.xml
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas 223583296 Dec 16 01:12 HITS.47898826._002755.pool.root.1
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas        95 Dec 16 01:12 pilot_heartbeat.json
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas      1046 Dec 16 01:12 memory_monitor_summary.json
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas    394596 Dec 16 01:12 log.47898826._002755.job.log.tgz.1
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas      7851 Dec 16 01:12 heartbeat.json
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas        27 Dec 16 01:13 wrapper_checkpoint.txt
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 01:13 boinc_mmap_file
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas       745 Dec 16 01:13 pilotlog.txt
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas    850145 Dec 16 01:13 log.47898826._002755.job.log.1
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas       357 Dec 16 01:13 output.list
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas       620 Dec 16 01:13 runtime_log
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas   1259520 Dec 16 01:13 result.tar.gz
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas       659 Dec 16 01:13 YrdMDmPRSp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgTYKDmb2Lprm.diag
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas      9344 Dec 16 01:13 runtime_log.err
[2025-12-16 01:13:30] -rw-r--r-- 1 boincer umatlas     21942 Dec 16 01:13 stderr.txt
[2025-12-16 01:13:30] HITS file was successfully produced:
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas 223583296 Dec 16 01:12 shared/HITS.pool.root.1
[2025-12-16 01:13:30]  *** Contents of shared directory: ***
[2025-12-16 01:13:30] total 440000
[2025-12-16 01:13:30] -rw-r--r-- 2 boincer umatlas 225099007 Dec 15 23:32 ATLAS.root_0
[2025-12-16 01:13:30] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 23:32 start_atlas.sh
[2025-12-16 01:13:30] -rw-r--r-- 2 boincer umatlas    592388 Dec 15 23:32 input.tar.gz
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas 223583296 Dec 16 01:12 HITS.pool.root.1
[2025-12-16 01:13:30] -rw------- 1 boincer umatlas   1259520 Dec 16 01:13 result.tar.gz
01:13:32 (9109): run_atlas exited; CPU time 66601.913820
01:13:32 (9109): called boinc_finish(0)

</stderr_txt>
]]>

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