Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:19:21 (209354): wrapper (7.7.26015): starting
01:19:21 (209354): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 01:19:21] Arguments: --nthreads 4
[2025-12-17 01:19:21] Threads: 4
[2025-12-17 01:19:21] Checking for CVMFS
[2025-12-17 01:19:21] No cvmfs_config command found, will try listing directly
[2025-12-17 01:19:21] CVMFS is ok
[2025-12-17 01:19:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 01:19:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 01:19:21] Further information can be found at the LHC@home message board.
[2025-12-17 01:19:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 01:19:21] Checking for apptainer binary...
[2025-12-17 01:19:21] which: no apptainer in ((null))
[2025-12-17 01:19:21] apptainer is not installed, using version from CVMFS
[2025-12-17 01:19:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 01:19:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-12-17 01:19:21] apptainer works
[2025-12-17 01:19:21] Set ATHENA_PROC_NUMBER=4
[2025-12-17 01:19:21] Set ATHENA_CORE_NUMBER=4
[2025-12-17 01:19:21] Starting ATLAS job with PandaID=6930226670
[2025-12-17 01:19:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 04:11:55]  *** The last 200 lines of the pilot log: ***
[2025-12-17 04:11:55] 2025-12-17 03:10:12,301 | INFO     | size of work directory /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6930226670: 2734138 B (within 2768240640 B limit)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,302 | INFO     | pfn file=/scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6930226670/HITS.47886831._010490.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,302 | INFO     | total size of present files: 0 B (workdir size: 2734138 B)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,302 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6930226670/HITS.47886831._010490.pool.root.1 since it does not exist
[2025-12-17 04:11:55] 2025-12-17 03:10:12,305 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2704.653140625
[2025-12-17 04:11:55] 2025-12-17 03:10:12,334 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6930226670/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,336 | INFO     | extracted standard info from prmon json
[2025-12-17 04:11:55] 2025-12-17 03:10:12,336 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 04:11:55] 2025-12-17 03:10:12,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 04:11:55] 2025-12-17 03:10:12,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 04:11:55] 2025-12-17 03:10:12,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 04:11:55] 2025-12-17 03:10:12,340 | INFO     | fitting pss+swap vs Time
[2025-12-17 04:11:55] 2025-12-17 03:10:12,340 | INFO     | sum of square deviations: 1444149868.0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,341 | INFO     | sum of deviations: 3800447497.999996
[2025-12-17 04:11:55] 2025-12-17 03:10:12,341 | INFO     | mean x: 1765935873.0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,341 | INFO     | mean y: 2329565.6646706588
[2025-12-17 04:11:55] 2025-12-17 03:10:12,341 | INFO     | intersect: -4644935042.31249
[2025-12-17 04:11:55] 2025-12-17 03:10:12,342 | INFO     | chi2: 1.310319523905478
[2025-12-17 04:11:55] 2025-12-17 03:10:12,342 | INFO     | sum of square deviations: 1318277740.5
[2025-12-17 04:11:55] 2025-12-17 03:10:12,343 | INFO     | sum of deviations: 3860015370.5000014
[2025-12-17 04:11:55] 2025-12-17 03:10:12,343 | INFO     | mean x: 1765935720.5
[2025-12-17 04:11:55] 2025-12-17 03:10:12,343 | INFO     | mean y: 2329637.8086419753
[2025-12-17 04:11:55] 2025-12-17 03:10:12,343 | INFO     | intersect: -5168461626.450738
[2025-12-17 04:11:55] 2025-12-17 03:10:12,344 | INFO     | chi2: 1.3111246454595984
[2025-12-17 04:11:55] 2025-12-17 03:10:12,344 | INFO     | current chi2=1.3111246454595984 (change=-0.0614446735648709 %)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,344 | INFO     | right removable region: 161
[2025-12-17 04:11:55] 2025-12-17 03:10:12,344 | INFO     | sum of square deviations: 1318277740.5
[2025-12-17 04:11:55] 2025-12-17 03:10:12,345 | INFO     | sum of deviations: -16028207926.999994
[2025-12-17 04:11:55] 2025-12-17 03:10:12,345 | INFO     | mean x: 1765936025.5
[2025-12-17 04:11:55] 2025-12-17 03:10:12,345 | INFO     | mean y: 2353191.2098765434
[2025-12-17 04:11:55] 2025-12-17 03:10:12,345 | INFO     | intersect: 21473389933.253666
[2025-12-17 04:11:55] 2025-12-17 03:10:12,345 | INFO     | chi2: 0.0311285890395374
[2025-12-17 04:11:55] 2025-12-17 03:10:12,346 | INFO     | current chi2=0.0311285890395374 (change=97.6243512767972 %)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,346 | INFO     | sum of square deviations: 1199940638.0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,347 | INFO     | sum of deviations: -14742603891.000004
[2025-12-17 04:11:55] 2025-12-17 03:10:12,347 | INFO     | mean x: 1765936178.0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,347 | INFO     | mean y: 2351529.4012738853
[2025-12-17 04:11:55] 2025-12-17 03:10:12,347 | INFO     | intersect: 21698839459.36542
[2025-12-17 04:11:55] 2025-12-17 03:10:12,347 | INFO     | chi2: 0.031016843908066073
[2025-12-17 04:11:55] 2025-12-17 03:10:12,347 | INFO     | current chi2=0.031016843908066073 (change=0.3589791086560196 %)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,347 | INFO     | left removable region: 20
[2025-12-17 04:11:55] 2025-12-17 03:10:12,348 | INFO     | sum of square deviations: 869188390.0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,348 | INFO     | sum of deviations: -10773906498.0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,349 | INFO     | mean x: 1765936300.0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,349 | INFO     | mean y: 2347440.8156028367
[2025-12-17 04:11:55] 2025-12-17 03:10:12,349 | INFO     | intersect: 21891770719.495243
[2025-12-17 04:11:55] 2025-12-17 03:10:12,349 | INFO     | chi2: 0.029154495317129357
[2025-12-17 04:11:55] 2025-12-17 03:10:12,349 | INFO     | current memory leak: -12.40 B/s (using 141 data points, chi2=0.03)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,350 | INFO     | could have reported an average CPU frequency of 2706 MHz (9 samples)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,350 | INFO     | ..............................
[2025-12-17 04:11:55] 2025-12-17 03:10:12,350 | INFO     | . Timing measurements:
[2025-12-17 04:11:55] 2025-12-17 03:10:12,350 | INFO     | . get job = 0 s
[2025-12-17 04:11:55] 2025-12-17 03:10:12,350 | INFO     | . initial setup = 1 s
[2025-12-17 04:11:55] 2025-12-17 03:10:12,350 | INFO     | . payload setup = 8 s
[2025-12-17 04:11:55] 2025-12-17 03:10:12,350 | INFO     | . stage-in = 0 s
[2025-12-17 04:11:55] 2025-12-17 03:10:12,350 | INFO     | . payload execution = 10194 s
[2025-12-17 04:11:55] 2025-12-17 03:10:12,350 | INFO     | . stage-out = 0 s
[2025-12-17 04:11:55] 2025-12-17 03:10:12,350 | INFO     | . log creation = 0 s
[2025-12-17 04:11:55] 2025-12-17 03:10:12,351 | INFO     | ..............................
[2025-12-17 04:11:55] 2025-12-17 03:10:12,811 | INFO     | 
[2025-12-17 04:11:55] 2025-12-17 03:10:12,812 | INFO     | job summary report
[2025-12-17 04:11:55] 2025-12-17 03:10:12,812 | INFO     | --------------------------------------------------
[2025-12-17 04:11:55] 2025-12-17 03:10:12,812 | INFO     | PanDA job id: 6930226670
[2025-12-17 04:11:55] 2025-12-17 03:10:12,812 | INFO     | task id: 47886831
[2025-12-17 04:11:55] 2025-12-17 03:10:12,812 | INFO     | errors: (none)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,812 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 04:11:55] 2025-12-17 03:10:12,812 | INFO     | pilot state: finished 
[2025-12-17 04:11:55] 2025-12-17 03:10:12,812 | INFO     | transexitcode: 0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,812 | INFO     | exeerrorcode: 0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | exeerrordiag: 
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | exitcode: 0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | exitmsg: OK
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | cpuconsumptiontime: 39125 s
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | nevents: 400
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | neventsw: 0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | pid: 231689
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | pgrp: 231689
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | corecount: 4
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | event service: False
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | sizes: {0: 2283834, 1: 2284033, 7: 2284295, 12: 2284323, 10206: 2313478, 10207: 2322500, 10211: 2322684, 10219: 2322970}
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | --------------------------------------------------
[2025-12-17 04:11:55] 2025-12-17 03:10:12,813 | INFO     | 
[2025-12-17 04:11:55] 2025-12-17 03:10:12,814 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-12-17 04:11:55] 2025-12-17 03:10:12,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,846 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,847 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,847 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,847 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,847 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,847 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,847 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,847 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 04:11:55] 2025-12-17 03:10:12,847 | INFO     | job 6930226670 has completed (purged errors)
[2025-12-17 04:11:55] 2025-12-17 03:10:12,847 | INFO     | overall cleanup function is called
[2025-12-17 04:11:55] 2025-12-17 03:10:13,249 | INFO     | number of running child processes to parent process 231689: 1
[2025-12-17 04:11:55] 2025-12-17 03:10:13,250 | INFO     | maximum number of monitored processes: 6
[2025-12-17 04:11:55] 2025-12-17 03:10:13,250 | INFO     | aborting job monitoring since job object (job id=6930226670) has expired
[2025-12-17 04:11:55] 2025-12-17 03:10:13,858 | INFO     | --- collectZombieJob: --- 10, [231689]
[2025-12-17 04:11:55] 2025-12-17 03:10:13,858 | INFO     | zombie collector waiting for pid 231689
[2025-12-17 04:11:55] 2025-12-17 03:10:13,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 04:11:55] 2025-12-17 03:10:13,859 | INFO     | collected zombie processes
[2025-12-17 04:11:55] 2025-12-17 03:10:13,859 | INFO     | will attempt to kill all subprocesses of pid=231689
[2025-12-17 04:11:55] 2025-12-17 03:10:14,547 | INFO     | process IDs to be killed: [231689] (in reverse order)
[2025-12-17 04:11:55] 2025-12-17 03:10:14,810 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 04:11:55] 2025-12-17 03:10:14,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 04:11:55] 2025-12-17 03:10:14,842 | INFO     | did not find any defunct processes belonging to 231689
[2025-12-17 04:11:55] 2025-12-17 03:10:14,870 | INFO     | did not find any defunct processes belonging to 231689
[2025-12-17 04:11:55] 2025-12-17 03:10:14,870 | INFO     | ready for new job
[2025-12-17 04:11:55] 2025-12-17 03:10:14,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 04:11:55] 2025-12-17 03:10:14,873 | INFO     | ***************************************
[2025-12-17 04:11:55] 2025-12-17 03:10:14,873 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 04:11:55] 2025-12-17 03:10:14,873 | INFO     | ***************************************
[2025-12-17 04:11:55] 2025-12-17 03:10:14,873 | INFO     | 
[2025-12-17 04:11:55] 2025-12-17 03:10:14,881 | INFO     | architecture information:
[2025-12-17 04:11:55] 2025-12-17 03:10:14,882 | INFO     | executing command: cat /etc/os-release
[2025-12-17 04:11:55] 2025-12-17 03:10:14,904 | INFO     | cat /etc/os-release:
[2025-12-17 04:11:55] NAME="CentOS Linux"
[2025-12-17 04:11:55] VERSION="7 (Core)"
[2025-12-17 04:11:55] ID="centos"
[2025-12-17 04:11:55] ID_LIKE="rhel fedora"
[2025-12-17 04:11:55] VERSION_ID="7"
[2025-12-17 04:11:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 04:11:55] ANSI_COLOR="0;31"
[2025-12-17 04:11:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 04:11:55] HOME_URL="https://www.centos.org/"
[2025-12-17 04:11:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 04:11:55] 
[2025-12-17 04:11:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 04:11:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 04:11:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 04:11:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 04:11:55] 
[2025-12-17 04:11:55] 2025-12-17 03:10:14,904 | INFO     | ***************************************
[2025-12-17 04:11:55] 2025-12-17 03:10:15,408 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-12-17 04:11:55] 2025-12-17 03:10:15,432 | INFO     | sufficient remaining disk space (3336197636096 B)
[2025-12-17 04:11:55] 2025-12-17 03:10:15,433 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 04:11:55] 2025-12-17 03:10:15,433 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 04:11:55] 2025-12-17 03:10:15,433 | INFO     | update_server=False
[2025-12-17 04:11:55] 2025-12-17 03:10:15,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 04:11:55] 2025-12-17 03:10:15,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 04:11:55] 2025-12-17 03:10:15,752 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 04:11:55] 2025-12-17 03:10:15,753 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 04:11:55] 2025-12-17 03:10:15,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 04:11:55] 2025-12-17 03:10:15,753 | INFO     | will abort loop
[2025-12-17 04:11:55] 2025-12-17 03:10:15,976 | INFO     | all job control threads have been joined
[2025-12-17 04:11:55] 2025-12-17 03:10:16,057 | INFO     | all data control threads have been joined
[2025-12-17 04:11:55] 2025-12-17 03:10:16,232 | INFO     | all payload control threads have been joined
[2025-12-17 04:11:55] 2025-12-17 03:10:16,319 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 04:11:55] 2025-12-17 03:10:16,439 | INFO     | [job] retrieve thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:16,599 | INFO     | [data] copytool_in thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:16,758 | INFO     | [job] job monitor thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:16,945 | INFO     | [payload] validate_post thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:16,982 | INFO     | [job] control thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:17,018 | INFO     | [job] validate thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:17,062 | INFO     | [data] control thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:17,115 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:17,238 | INFO     | [payload] control thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:17,295 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:17,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 04:11:55] 2025-12-17 03:10:17,568 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:17,911 | INFO     | [payload] failed_post thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:18,324 | INFO     | [data] copytool_out thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:18,459 | INFO     | [job] queue monitor thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:19,440 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:25,958 | INFO     | job.realtimelogging is not enabled
[2025-12-17 04:11:55] 2025-12-17 03:10:26,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 04:11:55] 2025-12-17 03:10:45,453 | INFO     | PID=216320 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 04:11:55] 2025-12-17 03:10:45,454 | INFO     | .. there are 9 such processes running
[2025-12-17 04:11:55] 2025-12-17 03:10:45,454 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 04:11:55] 2025-12-17 03:10:45,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 04:11:55] 2025-12-17 03:10:45,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 04:11:55] 2025-12-17 03:10:51,590 | INFO     | [monitor] cgroup control has ended
[2025-12-17 04:11:55] 2025-12-17 03:10:53,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23286143563584)>', '<ExcThread(monitor, started 23285565744896)>']
[2025-12-17 04:11:55] 2025-12-17 03:10:54,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 04:11:55] 2025-12-17 03:10:54,494 | INFO     | [monitor] control thread has ended
[2025-12-17 04:11:55] 2025-12-17 03:10:58,621 | INFO     | all workflow threads have been joined
[2025-12-17 04:11:55] 2025-12-17 03:10:58,621 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 04:11:55] 2025-12-17 03:10:58,621 | INFO     | traces error code: 0
[2025-12-17 04:11:55] 2025-12-17 03:10:58,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 04:11:55] 2025-12-17 03:10:58,826 [wrapper] ==== pilot stdout END ====
[2025-12-17 04:11:55] 2025-12-17 03:10:58,830 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 04:11:55] 2025-12-17 03:10:58,834 [wrapper] pilotpid: 216320
[2025-12-17 04:11:55] 2025-12-17 03:10:58,838 [wrapper] Pilot exit status: 0
[2025-12-17 04:11:55] 2025-12-17 03:10:58,853 [wrapper] pandaids: 6930226670
[2025-12-17 04:11:55] 2025-12-17 03:10:59,020 [wrapper] cleanup supervisor_pilot  588818 216322
[2025-12-17 04:11:55] 2025-12-17 03:10:59,027 [wrapper] Test setup, not cleaning
[2025-12-17 04:11:55] 2025-12-17 03:10:59,031 [wrapper] apfmon messages muted
[2025-12-17 04:11:55] 2025-12-17 03:10:59,035 [wrapper] ==== wrapper stdout END ====
[2025-12-17 04:11:55] 2025-12-17 03:10:59,039 [wrapper] ==== wrapper stderr END ====
[2025-12-17 04:11:55]  *** Error codes and diagnostics ***
[2025-12-17 04:11:55]     "exeErrorCode": 0,
[2025-12-17 04:11:55]     "exeErrorDiag": "",
[2025-12-17 04:11:55]     "pilotErrorCode": 0,
[2025-12-17 04:11:55]     "pilotErrorDiag": "",
[2025-12-17 04:11:55]  *** Listing of results directory ***
[2025-12-17 04:11:55] total 340292
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc    579449 Dec 16 00:23 pilot3.tar.gz
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc      5112 Dec 16 00:23 queuedata.json
[2025-12-17 04:11:55] -rwx------ 1 boinc boinc     36322 Dec 16 00:25 runpilot2-wrapper.sh
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc       100 Dec 17 01:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 04:11:55] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 01:19 run_atlas
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc       105 Dec 17 01:19 job.xml
[2025-12-17 04:11:55] -rw-r--r-- 2 boinc boinc 190714391 Dec 17 01:19 EVNT.47886829._000434.pool.root.1
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc      6691 Dec 17 01:19 init_data.xml
[2025-12-17 04:11:55] -rw-r--r-- 2 boinc boinc     15847 Dec 17 01:19 start_atlas.sh
[2025-12-17 04:11:55] drwxrwx--x 2 boinc boinc      4096 Dec 17 01:19 shared
[2025-12-17 04:11:55] -rw-r--r-- 2 boinc boinc    592410 Dec 17 01:19 input.tar.gz
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc         0 Dec 17 01:19 boinc_lockfile
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc      2539 Dec 17 01:19 pandaJob.out
[2025-12-17 04:11:55] -rw------- 1 boinc boinc    987401 Dec 17 01:19 agis_schedconf.cvmfs.json
[2025-12-17 04:11:55] -rw------- 1 boinc boinc   1516240 Dec 17 01:19 agis_ddmendpoints.agis.ALL.json
[2025-12-17 04:11:55] drwx------ 5 boinc boinc      4096 Dec 17 01:19 pilot3
[2025-12-17 04:11:55] -rw------- 1 boinc boinc 150266054 Dec 17 04:09 HITS.47886831._010490.pool.root.1
[2025-12-17 04:11:55] -rw------- 1 boinc boinc      1027 Dec 17 04:09 memory_monitor_summary.json
[2025-12-17 04:11:55] -rw------- 1 boinc boinc    346000 Dec 17 04:10 log.47886831._010490.job.log.tgz.1
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc       529 Dec 17 04:10 boinc_task_state.xml
[2025-12-17 04:11:55] -rw------- 1 boinc boinc        95 Dec 17 04:10 pilot_heartbeat.json
[2025-12-17 04:11:55] -rw------- 1 boinc boinc      7786 Dec 17 04:10 heartbeat.json
[2025-12-17 04:11:55] -rw------- 1 boinc boinc      5092 Dec 17 04:10 pilotlog.txt
[2025-12-17 04:11:55] -rw------- 1 boinc boinc   1432285 Dec 17 04:10 log.47886831._010490.job.log.1
[2025-12-17 04:11:55] -rw------- 1 boinc boinc       357 Dec 17 04:10 output.list
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc       620 Dec 17 04:10 runtime_log
[2025-12-17 04:11:55] -rw------- 1 boinc boinc   1802240 Dec 17 04:10 result.tar.gz
[2025-12-17 04:11:55] -rw------- 1 boinc boinc       664 Dec 17 04:10 vmILDmK7Wp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvQUKDmNl4rbm.diag
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc      9223 Dec 17 04:10 runtime_log.err
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc        26 Dec 17 04:11 wrapper_checkpoint.txt
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc      8192 Dec 17 04:11 boinc_mmap_file
[2025-12-17 04:11:55] -rw-r--r-- 1 boinc boinc     21310 Dec 17 04:11 stderr.txt
[2025-12-17 04:11:56] HITS file was successfully produced:
[2025-12-17 04:11:56] -rw------- 1 boinc boinc 150266054 Dec 17 04:09 shared/HITS.pool.root.1
[2025-12-17 04:11:56]  *** Contents of shared directory: ***
[2025-12-17 04:11:56] total 335360
[2025-12-17 04:11:56] -rw-r--r-- 2 boinc boinc 190714391 Dec 17 01:19 ATLAS.root_0
[2025-12-17 04:11:56] -rw-r--r-- 2 boinc boinc     15847 Dec 17 01:19 start_atlas.sh
[2025-12-17 04:11:56] -rw-r--r-- 2 boinc boinc    592410 Dec 17 01:19 input.tar.gz
[2025-12-17 04:11:56] -rw------- 1 boinc boinc 150266054 Dec 17 04:09 HITS.pool.root.1
[2025-12-17 04:11:56] -rw------- 1 boinc boinc   1802240 Dec 17 04:10 result.tar.gz
04:11:57 (209354): run_atlas exited; CPU time 39798.910884
04:11:57 (209354): called boinc_finish(0)

</stderr_txt>
]]>

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