Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:54 (3137210): wrapper (7.7.26015): starting
00:04:54 (3137210): wrapper: running run_atlas (--nthreads 9)
[2025-12-16 00:04:54] Arguments: --nthreads 9
[2025-12-16 00:04:54] Threads: 9
[2025-12-16 00:04:54] Checking for CVMFS
[2025-12-16 00:04:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 00:04:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 00:04:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 00:04:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 00:04:57] 2.13.3.0 9262 58272 318596 154058 2 418 26103051 32935936 18005 16776704 0 267907445 99.707 194167887 32893 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 00:04:57] CVMFS is ok
[2025-12-16 00:04:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 00:04:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 00:04:57] Further information can be found at the LHC@home message board.
[2025-12-16 00:04:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 00:04:57] Checking for apptainer binary...
[2025-12-16 00:04:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 00:04:57] Running /usr/bin/apptainer --version
[2025-12-16 00:04:57] apptainer version 1.4.5-2.el9
[2025-12-16 00:04:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 00:04:59] c-8-32.aglt2.org
[2025-12-16 00:04:59] apptainer works
[2025-12-16 00:04:59] Set ATHENA_PROC_NUMBER=9
[2025-12-16 00:04:59] Set ATHENA_CORE_NUMBER=9
[2025-12-16 00:04:59] Starting ATLAS job with PandaID=6931152561
[2025-12-16 00:04:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 18:23:53]  *** The last 200 lines of the pilot log: ***
[2025-12-16 18:23:53] 2025-12-16 23:22:41,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 18:23:53] 2025-12-16 23:22:42,895 | INFO     | PID=3146985 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 18:23:53] 2025-12-16 23:22:42,952 | INFO     | .. there are 40 such processes running
[2025-12-16 18:23:53] 2025-12-16 23:22:43,559 | INFO     | monitor loop #4031: job 0:6931152561 is in state 'finished'
[2025-12-16 18:23:53] 2025-12-16 23:22:43,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 18:23:53] 2025-12-16 23:22:43,953 | INFO     | time since job start (65755s) is within the limit (174528.0s)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,177 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 18:23:53] 2025-12-16 23:22:45,203 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2585.92285
[2025-12-16 18:23:53] 2025-12-16 23:22:45,213 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6931152561/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,214 | INFO     | extracted standard info from prmon json
[2025-12-16 18:23:53] 2025-12-16 23:22:45,215 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 18:23:53] 2025-12-16 23:22:45,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 18:23:53] 2025-12-16 23:22:45,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 18:23:53] 2025-12-16 23:22:45,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 18:23:53] 2025-12-16 23:22:45,311 | INFO     | fitting pss+swap vs Time
[2025-12-16 18:23:53] 2025-12-16 23:22:45,323 | INFO     | sum of square deviations: 384119437826.9882
[2025-12-16 18:23:53] 2025-12-16 23:22:45,538 | INFO     | sum of deviations: 1607235646570.001
[2025-12-16 18:23:53] 2025-12-16 23:22:45,539 | INFO     | mean x: 1765894549.3081937
[2025-12-16 18:23:53] 2025-12-16 23:22:45,539 | INFO     | mean y: 2524110.148044693
[2025-12-16 18:23:53] 2025-12-16 23:22:45,539 | INFO     | intersect: -7386346090.714211
[2025-12-16 18:23:53] 2025-12-16 23:22:45,540 | INFO     | chi2: 7.604896609310191
[2025-12-16 18:23:53] 2025-12-16 23:22:45,542 | INFO     | sum of square deviations: 378779537321.20715
[2025-12-16 18:23:53] 2025-12-16 23:22:45,576 | INFO     | sum of deviations: 1665377657851.6277
[2025-12-16 18:23:53] 2025-12-16 23:22:45,576 | INFO     | mean x: 1765894396.8119738
[2025-12-16 18:23:53] 2025-12-16 23:22:45,577 | INFO     | mean y: 2525763.231992516
[2025-12-16 18:23:53] 2025-12-16 23:22:45,577 | INFO     | intersect: -7761571250.493843
[2025-12-16 18:23:53] 2025-12-16 23:22:45,579 | INFO     | chi2: 6.920902525746064
[2025-12-16 18:23:53] 2025-12-16 23:22:45,579 | INFO     | current chi2=6.920902525746064 (change=8.994127319584544 %)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,579 | INFO     | right removable region: 1068
[2025-12-16 18:23:53] 2025-12-16 23:22:45,581 | INFO     | sum of square deviations: 378779203773.0703
[2025-12-16 18:23:53] 2025-12-16 23:22:45,651 | INFO     | sum of deviations: 1251563056859.237
[2025-12-16 18:23:53] 2025-12-16 23:22:45,651 | INFO     | mean x: 1765894701.8091674
[2025-12-16 18:23:53] 2025-12-16 23:22:45,652 | INFO     | mean y: 2534263.241347053
[2025-12-16 18:23:53] 2025-12-16 23:22:45,652 | INFO     | intersect: -5832338794.921366
[2025-12-16 18:23:53] 2025-12-16 23:22:45,653 | INFO     | chi2: 3.7601853372419125
[2025-12-16 18:23:53] 2025-12-16 23:22:45,654 | INFO     | current chi2=3.7601853372419125 (change=50.55573362248532 %)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,655 | INFO     | sum of square deviations: 373488953754.11646
[2025-12-16 18:23:53] 2025-12-16 23:22:45,685 | INFO     | sum of deviations: 1112119911365.4307
[2025-12-16 18:23:53] 2025-12-16 23:22:45,686 | INFO     | mean x: 1765894854.306391
[2025-12-16 18:23:53] 2025-12-16 23:22:45,686 | INFO     | mean y: 2538279.421992481
[2025-12-16 18:23:53] 2025-12-16 23:22:45,686 | INFO     | intersect: -5255681030.980433
[2025-12-16 18:23:53] 2025-12-16 23:22:45,688 | INFO     | chi2: 3.169644113097793
[2025-12-16 18:23:53] 2025-12-16 23:22:45,688 | INFO     | current chi2=3.169644113097793 (change=15.705109487429691 %)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,688 | INFO     | left removable region: 20
[2025-12-16 18:23:53] 2025-12-16 23:22:45,690 | INFO     | sum of square deviations: 356890811593.1907
[2025-12-16 18:23:53] 2025-12-16 23:22:45,716 | INFO     | sum of deviations: 893806148437.4159
[2025-12-16 18:23:53] 2025-12-16 23:22:45,716 | INFO     | mean x: 1765894976.317748
[2025-12-16 18:23:53] 2025-12-16 23:22:45,716 | INFO     | mean y: 2548156.5152671756
[2025-12-16 18:23:53] 2025-12-16 23:22:45,716 | INFO     | intersect: -4420002763.9793825
[2025-12-16 18:23:53] 2025-12-16 23:22:45,717 | INFO     | chi2: 1.455547382566157
[2025-12-16 18:23:53] 2025-12-16 23:22:45,718 | INFO     | current memory leak: 2.50 B/s (using 1048 data points, chi2=1.46)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,719 | INFO     | could have reported an average CPU frequency of 2596 MHz (39 samples)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,719 | INFO     | ..............................
[2025-12-16 18:23:53] 2025-12-16 23:22:45,719 | INFO     | . Timing measurements:
[2025-12-16 18:23:53] 2025-12-16 23:22:45,719 | INFO     | . get job = 0 s
[2025-12-16 18:23:53] 2025-12-16 23:22:45,719 | INFO     | . initial setup = 6 s
[2025-12-16 18:23:53] 2025-12-16 23:22:45,720 | INFO     | . payload setup = 53 s
[2025-12-16 18:23:53] 2025-12-16 23:22:45,720 | INFO     | . stage-in = 0 s
[2025-12-16 18:23:53] 2025-12-16 23:22:45,720 | INFO     | . payload execution = 65536 s
[2025-12-16 18:23:53] 2025-12-16 23:22:45,720 | INFO     | . stage-out = 7 s
[2025-12-16 18:23:53] 2025-12-16 23:22:45,720 | INFO     | . log creation = 1 s
[2025-12-16 18:23:53] 2025-12-16 23:22:45,720 | INFO     | ..............................
[2025-12-16 18:23:53] 2025-12-16 23:22:45,827 | INFO     | 
[2025-12-16 18:23:53] 2025-12-16 23:22:45,828 | INFO     | job summary report
[2025-12-16 18:23:53] 2025-12-16 23:22:45,828 | INFO     | --------------------------------------------------
[2025-12-16 18:23:53] 2025-12-16 23:22:45,828 | INFO     | PanDA job id: 6931152561
[2025-12-16 18:23:53] 2025-12-16 23:22:45,828 | INFO     | task id: 47899050
[2025-12-16 18:23:53] 2025-12-16 23:22:45,828 | INFO     | errors: (none)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 18:23:53] 2025-12-16 23:22:45,828 | INFO     | pilot state: finished 
[2025-12-16 18:23:53] 2025-12-16 23:22:45,828 | INFO     | transexitcode: 0
[2025-12-16 18:23:53] 2025-12-16 23:22:45,828 | INFO     | exeerrorcode: 0
[2025-12-16 18:23:53] 2025-12-16 23:22:45,829 | INFO     | exeerrordiag: 
[2025-12-16 18:23:53] 2025-12-16 23:22:45,829 | INFO     | exitcode: 0
[2025-12-16 18:23:53] 2025-12-16 23:22:45,829 | INFO     | exitmsg: OK
[2025-12-16 18:23:53] 2025-12-16 23:22:45,829 | INFO     | cpuconsumptiontime: 47272 s
[2025-12-16 18:23:53] 2025-12-16 23:22:45,829 | INFO     | nevents: 400
[2025-12-16 18:23:53] 2025-12-16 23:22:45,829 | INFO     | neventsw: 0
[2025-12-16 18:23:53] 2025-12-16 23:22:45,829 | INFO     | pid: 3179404
[2025-12-16 18:23:53] 2025-12-16 23:22:45,829 | INFO     | pgrp: 3179404
[2025-12-16 18:23:53] 2025-12-16 23:22:45,829 | INFO     | corecount: 9
[2025-12-16 18:23:53] 2025-12-16 23:22:45,829 | INFO     | event service: False
[2025-12-16 18:23:53] 2025-12-16 23:22:45,830 | INFO     | sizes: {0: 2283699, 1: 2283755, 3: 2283982, 4: 2284010, 15: 2284010, 26: 2284038, 38: 2284194, 49: 2284222, 54: 2284512, 61: 2284540, 65594: 2339125, 65596: 233940
[2025-12-16 18:23:53] 2025-12-16 23:22:45,830 | INFO     | --------------------------------------------------
[2025-12-16 18:23:53] 2025-12-16 23:22:45,830 | INFO     | 
[2025-12-16 18:23:53] 2025-12-16 23:22:45,830 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-16 18:23:53] 2025-12-16 23:22:45,976 | INFO     | time since job start (65757s) is within the limit (174528.0s)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,992 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,992 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,992 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,992 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,994 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,994 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,994 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 18:23:53] 2025-12-16 23:22:45,994 | INFO     | job 6931152561 has completed (purged errors)
[2025-12-16 18:23:53] 2025-12-16 23:22:45,994 | INFO     | overall cleanup function is called
[2025-12-16 18:23:53] 2025-12-16 23:22:47,024 | INFO     | --- collectZombieJob: --- 10, [3179404]
[2025-12-16 18:23:53] 2025-12-16 23:22:47,025 | INFO     | zombie collector waiting for pid 3179404
[2025-12-16 18:23:53] 2025-12-16 23:22:47,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 18:23:53] 2025-12-16 23:22:47,025 | INFO     | collected zombie processes
[2025-12-16 18:23:53] 2025-12-16 23:22:47,025 | INFO     | will attempt to kill all subprocesses of pid=3179404
[2025-12-16 18:23:53] 2025-12-16 23:22:49,016 | INFO     | process IDs to be killed: [3179404] (in reverse order)
[2025-12-16 18:23:53] 2025-12-16 23:22:49,674 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 18:23:53] 2025-12-16 23:22:49,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 18:23:53] 2025-12-16 23:22:49,816 | INFO     | did not find any defunct processes belonging to 3179404
[2025-12-16 18:23:53] 2025-12-16 23:22:49,834 | INFO     | did not find any defunct processes belonging to 3179404
[2025-12-16 18:23:53] 2025-12-16 23:22:49,884 | INFO     | ready for new job
[2025-12-16 18:23:53] 2025-12-16 23:22:49,884 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 18:23:53] 2025-12-16 23:22:49,898 | INFO     | ***************************************
[2025-12-16 18:23:53] 2025-12-16 23:22:49,898 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 18:23:53] 2025-12-16 23:22:49,898 | INFO     | ***************************************
[2025-12-16 18:23:53] 2025-12-16 23:22:49,898 | INFO     | 
[2025-12-16 18:23:53] 2025-12-16 23:22:49,903 | INFO     | architecture information:
[2025-12-16 18:23:53] 2025-12-16 23:22:49,904 | INFO     | executing command: cat /etc/os-release
[2025-12-16 18:23:53] 2025-12-16 23:22:50,118 | INFO     | cat /etc/os-release:
[2025-12-16 18:23:53] NAME="CentOS Linux"
[2025-12-16 18:23:53] VERSION="7 (Core)"
[2025-12-16 18:23:53] ID="centos"
[2025-12-16 18:23:53] ID_LIKE="rhel fedora"
[2025-12-16 18:23:53] VERSION_ID="7"
[2025-12-16 18:23:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 18:23:53] ANSI_COLOR="0;31"
[2025-12-16 18:23:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 18:23:53] HOME_URL="https://www.centos.org/"
[2025-12-16 18:23:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 18:23:53] 
[2025-12-16 18:23:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 18:23:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 18:23:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 18:23:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 18:23:53] 
[2025-12-16 18:23:53] 2025-12-16 23:22:50,125 | INFO     | ***************************************
[2025-12-16 18:23:53] 2025-12-16 23:22:50,628 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-16 18:23:53] 2025-12-16 23:22:50,779 | INFO     | sufficient remaining disk space (75009884160 B)
[2025-12-16 18:23:53] 2025-12-16 23:22:50,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 18:23:53] 2025-12-16 23:22:50,780 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 18:23:53] 2025-12-16 23:22:50,780 | INFO     | update_server=False
[2025-12-16 18:23:53] 2025-12-16 23:22:50,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 18:23:53] 2025-12-16 23:22:50,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 18:23:53] 2025-12-16 23:22:50,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 18:23:53] 2025-12-16 23:22:51,055 | INFO     | all job control threads have been joined
[2025-12-16 18:23:53] 2025-12-16 23:22:51,162 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 18:23:53] 2025-12-16 23:22:51,163 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 18:23:53] 2025-12-16 23:22:51,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 18:23:53] 2025-12-16 23:22:51,163 | INFO     | will abort loop
[2025-12-16 18:23:53] 2025-12-16 23:22:51,773 | INFO     | all payload control threads have been joined
[2025-12-16 18:23:53] 2025-12-16 23:22:51,793 | INFO     | [job] retrieve thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:51,868 | INFO     | all data control threads have been joined
[2025-12-16 18:23:53] 2025-12-16 23:22:51,902 | INFO     | [job] queue monitor thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:52,062 | INFO     | [job] control thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:52,083 | INFO     | [payload] validate_post thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:52,172 | INFO     | [job] job monitor thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:52,608 | INFO     | [payload] failed_post thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:52,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 18:23:53] 2025-12-16 23:22:52,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:52,800 | INFO     | [payload] control thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:52,801 | INFO     | [data] copytool_out thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:52,875 | INFO     | [data] control thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:53,225 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:53,225 | INFO     | [job] validate thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:53,226 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:53,232 | INFO     | [data] copytool_in thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:53,253 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:22:56,725 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 18:23:53] 2025-12-16 23:23:21,059 | INFO     | PID=3146985 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 18:23:53] 2025-12-16 23:23:21,059 | INFO     | .. there are 40 such processes running
[2025-12-16 18:23:53] 2025-12-16 23:23:21,060 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 18:23:53] 2025-12-16 23:23:21,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 18:23:53] 2025-12-16 23:23:21,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 18:23:53] 2025-12-16 23:23:46,231 | INFO     | [monitor] cgroup control has ended
[2025-12-16 18:23:53] 2025-12-16 23:23:47,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140222157760320)>', '<ExcThread(monitor, started 140221068859136)>']
[2025-12-16 18:23:53] 2025-12-16 23:23:48,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 18:23:53] 2025-12-16 23:23:48,264 | INFO     | [monitor] control thread has ended
[2025-12-16 18:23:53] 2025-12-16 23:23:52,308 | INFO     | all workflow threads have been joined
[2025-12-16 18:23:53] 2025-12-16 23:23:52,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 18:23:53] 2025-12-16 23:23:52,309 | INFO     | traces error code: 0
[2025-12-16 18:23:53] 2025-12-16 23:23:52,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 18:23:53] 2025-12-16 23:23:52,948 [wrapper] ==== pilot stdout END ====
[2025-12-16 18:23:53] 2025-12-16 23:23:52,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 18:23:53] 2025-12-16 23:23:52,986 [wrapper] pilotpid: 3146985
[2025-12-16 18:23:53] 2025-12-16 23:23:52,989 [wrapper] Pilot exit status: 0
[2025-12-16 18:23:53] 2025-12-16 23:23:53,012 [wrapper] pandaids: 6931152561
[2025-12-16 18:23:53] 2025-12-16 23:23:53,107 [wrapper] cleanup supervisor_pilot 4137708 3146986
[2025-12-16 18:23:53] 2025-12-16 23:23:53,178 [wrapper] Test setup, not cleaning
[2025-12-16 18:23:53] 2025-12-16 23:23:53,242 [wrapper] apfmon messages muted
[2025-12-16 18:23:53] 2025-12-16 23:23:53,271 [wrapper] ==== wrapper stdout END ====
[2025-12-16 18:23:53] 2025-12-16 23:23:53,294 [wrapper] ==== wrapper stderr END ====
[2025-12-16 18:23:53]  *** Error codes and diagnostics ***
[2025-12-16 18:23:53]     "exeErrorCode": 0,
[2025-12-16 18:23:53]     "exeErrorDiag": "",
[2025-12-16 18:23:53]     "pilotErrorCode": 0,
[2025-12-16 18:23:53]     "pilotErrorDiag": "",
[2025-12-16 18:23:53]  *** Listing of results directory ***
[2025-12-16 18:23:53] total 389192
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 22:37 pilot3.tar.gz
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 22:37 queuedata.json
[2025-12-16 18:23:53] -rwx------. 1 boincer umatlas     36322 Dec 14 22:37 runpilot2-wrapper.sh
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas       100 Dec 16 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 18:23:53] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 00:04 run_atlas
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas       105 Dec 16 00:04 job.xml
[2025-12-16 18:23:53] -rw-r--r--. 2 boincer umatlas 198325991 Dec 16 00:04 EVNT.47899048._000008.pool.root.1
[2025-12-16 18:23:53] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:04 start_atlas.sh
[2025-12-16 18:23:53] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 00:04 shared
[2025-12-16 18:23:53] -rw-r--r--. 2 boincer umatlas    592382 Dec 16 00:04 input.tar.gz
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas         0 Dec 16 00:04 boinc_lockfile
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas      2486 Dec 16 00:04 pandaJob.out
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas        57 Dec 16 00:05 setup.sh.local
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas    994531 Dec 16 00:06 agis_schedconf.cvmfs.json
[2025-12-16 18:23:53] drwx------. 5 boincer umatlas      4096 Dec 16 00:06 pilot3
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas 177547601 Dec 16 18:20 HITS.47899050._000246.pool.root.1
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas       531 Dec 16 18:20 boinc_task_state.xml
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas      1044 Dec 16 18:21 memory_monitor_summary.json
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas   1516240 Dec 16 18:21 agis_ddmendpoints.agis.ALL.json
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas   1139332 Dec 16 18:21 log.47899050._000246.job.log.tgz.1
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas      6709 Dec 16 18:22 init_data.xml
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas        95 Dec 16 18:22 pilot_heartbeat.json
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas      7817 Dec 16 18:22 heartbeat.json
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas      5010 Dec 16 18:23 pilotlog.txt
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas        28 Dec 16 18:23 wrapper_checkpoint.txt
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 18:23 boinc_mmap_file
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas   8228782 Dec 16 18:23 log.47899050._000246.job.log.1
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas       357 Dec 16 18:23 output.list
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas       620 Dec 16 18:23 runtime_log
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas   9390080 Dec 16 18:23 result.tar.gz
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas      9333 Dec 16 18:23 runtime_log.err
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas       655 Dec 16 18:23 3uDNDmPaEp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmohSKDmm8VYim.diag
[2025-12-16 18:23:53] -rw-r--r--. 1 boincer umatlas     21496 Dec 16 18:23 stderr.txt
[2025-12-16 18:23:53] HITS file was successfully produced:
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas 177547601 Dec 16 18:20 shared/HITS.pool.root.1
[2025-12-16 18:23:53]  *** Contents of shared directory: ***
[2025-12-16 18:23:53] total 376840
[2025-12-16 18:23:53] -rw-r--r--. 2 boincer umatlas 198325991 Dec 16 00:04 ATLAS.root_0
[2025-12-16 18:23:53] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:04 start_atlas.sh
[2025-12-16 18:23:53] -rw-r--r--. 2 boincer umatlas    592382 Dec 16 00:04 input.tar.gz
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas 177547601 Dec 16 18:20 HITS.pool.root.1
[2025-12-16 18:23:53] -rw-------. 1 boincer umatlas   9390080 Dec 16 18:23 result.tar.gz
18:23:55 (3137210): run_atlas exited; CPU time 50669.331232
18:23:55 (3137210): called boinc_finish(0)

</stderr_txt>
]]>

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