Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:40:05 (2935992): wrapper (7.7.26015): starting
19:40:05 (2935992): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 19:40:05] Arguments: --nthreads 12
[2025-12-15 19:40:05] Threads: 12
[2025-12-15 19:40:05] Checking for CVMFS
[2025-12-15 19:40:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 19:40:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 19:40:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 19:40:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 19:40:05] 2.11.5.0 1748072 21479 373852 154056 0 393 43637275 45568001 11618 130560 0 153552268 99.833 80906807 16402 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-15 19:40:05] CVMFS is ok
[2025-12-15 19:40:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 19:40:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 19:40:05] Further information can be found at the LHC@home message board.
[2025-12-15 19:40:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 19:40:05] Checking for apptainer binary...
[2025-12-15 19:40:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 19:40:05] Running /usr/bin/apptainer --version
[2025-12-15 19:40:05] apptainer version 1.4.1-1.el9
[2025-12-15 19:40:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 19:40:05] wns0025.triumf.lcg
[2025-12-15 19:40:05] apptainer works
[2025-12-15 19:40:05] Set ATHENA_PROC_NUMBER=12
[2025-12-15 19:40:05] Set ATHENA_CORE_NUMBER=12
[2025-12-15 19:40:05] Starting ATLAS job with PandaID=6929807417
[2025-12-15 19:40:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 19:43:23]  *** The last 200 lines of the pilot log: ***
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | WARNING  | found no stored workdir sizes
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | INFO     | will not add max space = 0 B to job metrics
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | WARNING  | wrong length of table data, x=[1765856437.0], y=[1157.0] (must be same and length>=4)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | INFO     | could have reported an average CPU frequency of 2580 MHz (4 samples)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | ..............................
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . Timing measurements:
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . get job = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . initial setup = 2 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . payload setup = 4 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . stage-in = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . payload execution = 15 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . stage-out = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . log creation = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | ..............................
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929807417/pilotlog.txt
[2025-12-15 19:43:23] 2025-12-16 03:42:51,718 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-15 19:43:23] - Log from pilotlog.txt -
[2025-12-15 19:43:23] 2025-12-16 03:42:51,706 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 19:43:23] 2025-12-16 03:42:51,706 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | WARNING  | found no stored workdir sizes
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | INFO     | will not add max space = 0 B to job metrics
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | WARNING  | wrong length of table data, x=[1765856437.0], y=[1157.0] (must be same and length>=4)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | INFO     | could have reported an average CPU frequency of 2580 MHz (4 samples)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | ..............................
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . Timing measurements:
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . get job = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . initial setup = 2 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . payload setup = 4 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . stage-in = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . payload execution = 15 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . stage-out = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . log creation = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | ..............................
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929807417/pilotlog.txt
[2025-12-15 19:43:23] 2025-12-16 03:42:51,718 | WARNING  | 
[2025-12-15 19:43:23] [begin log extracts]
[2025-12-15 19:43:23] - Log from pilotlog.txt -
[2025-12-15 19:43:23] 2025-12-16 03:42:51,706 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 19:43:23] 2025-12-16 03:42:51,706 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | WARNING  | found no stored workdir sizes
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | INFO     | will not add max space = 0 B to job metrics
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | WARNING  | wrong length of table data, x=[1765856437.0], y=[1157.0] (must be same and length>=4)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,707 | INFO     | could have reported an average CPU frequency of 2580 MHz (4 samples)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | ..............................
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . Timing measurements:
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . get job = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . initial setup = 2 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . payload setup = 4 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . stage-in = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . payload execution = 15 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . stage-out = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | . log creation = 0 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | ..............................
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 19:43:23] 2025-12-16 03:42:51,708 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929807417/pilotlog.txt
[2025-12-15 19:43:23] [end log extracts]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,718 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,719 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-15 19:43:23] 2025-12-16 03:42:51,834 | INFO     | 
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | job summary report
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | --------------------------------------------------
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | PanDA job id: 6929807417
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | task id: 47898826
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-15 19:40:43,619 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | pilot state: failed 
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | transexitcode: 65
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | exeerrorcode: 65
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | exitcode: 65
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | cpuconsumptiontime: 16 s
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | nevents: 0
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | neventsw: 0
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | pid: 2946430
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | pgrp: 2946430
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | corecount: 12
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | event service: False
[2025-12-15 19:43:23] 2025-12-16 03:42:51,835 | INFO     | sizes: {0: 2283956, 4: 2284218, 11: 2284246, 23: 2311630, 24: 2311630, 144: 2311796}
[2025-12-15 19:43:23] 2025-12-16 03:42:51,836 | INFO     | --------------------------------------------------
[2025-12-15 19:43:23] 2025-12-16 03:42:51,836 | INFO     | 
[2025-12-15 19:43:23] 2025-12-16 03:42:51,836 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-15 19:43:23] 2025-12-16 03:42:51,848 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,848 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,848 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,848 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | job 6929807417 has completed (purged errors)
[2025-12-15 19:43:23] 2025-12-16 03:42:51,849 | INFO     | overall cleanup function is called
[2025-12-15 19:43:23] 2025-12-16 03:42:52,855 | INFO     | --- collectZombieJob: --- 10, [2946430]
[2025-12-15 19:43:23] 2025-12-16 03:42:52,856 | INFO     | zombie collector waiting for pid 2946430
[2025-12-15 19:43:23] 2025-12-16 03:42:52,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 19:43:23] 2025-12-16 03:42:52,856 | INFO     | collected zombie processes
[2025-12-15 19:43:23] 2025-12-16 03:42:52,856 | INFO     | will attempt to kill all subprocesses of pid=2946430
[2025-12-15 19:43:23] 2025-12-16 03:42:53,030 | INFO     | process IDs to be killed: [2946430] (in reverse order)
[2025-12-15 19:43:23] 2025-12-16 03:42:53,093 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 19:43:23] 2025-12-16 03:42:53,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 19:43:23] 2025-12-16 03:42:53,101 | INFO     | did not find any defunct processes belonging to 2946430
[2025-12-15 19:43:23] 2025-12-16 03:42:53,108 | INFO     | did not find any defunct processes belonging to 2946430
[2025-12-15 19:43:23] 2025-12-16 03:42:53,108 | INFO     | ready for new job
[2025-12-15 19:43:23] 2025-12-16 03:42:53,108 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 19:43:23] 2025-12-16 03:42:53,109 | INFO     | ***************************************
[2025-12-15 19:43:23] 2025-12-16 03:42:53,110 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 19:43:23] 2025-12-16 03:42:53,110 | INFO     | ***************************************
[2025-12-15 19:43:23] 2025-12-16 03:42:53,110 | INFO     | 
[2025-12-15 19:43:23] 2025-12-16 03:42:53,112 | INFO     | architecture information:
[2025-12-15 19:43:23] 2025-12-16 03:42:53,112 | INFO     | executing command: cat /etc/os-release
[2025-12-15 19:43:23] 2025-12-16 03:42:53,121 | INFO     | cat /etc/os-release:
[2025-12-15 19:43:23] NAME="CentOS Linux"
[2025-12-15 19:43:23] VERSION="7 (Core)"
[2025-12-15 19:43:23] ID="centos"
[2025-12-15 19:43:23] ID_LIKE="rhel fedora"
[2025-12-15 19:43:23] VERSION_ID="7"
[2025-12-15 19:43:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 19:43:23] ANSI_COLOR="0;31"
[2025-12-15 19:43:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 19:43:23] HOME_URL="https://www.centos.org/"
[2025-12-15 19:43:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 19:43:23] 
[2025-12-15 19:43:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 19:43:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 19:43:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 19:43:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 19:43:23] 
[2025-12-15 19:43:23] 2025-12-16 03:42:53,121 | INFO     | ***************************************
[2025-12-15 19:43:23] 2025-12-16 03:42:53,624 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-15 19:43:23] 2025-12-16 03:42:53,635 | INFO     | sufficient remaining disk space (1970558468096 B)
[2025-12-15 19:43:23] 2025-12-16 03:42:53,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 19:43:23] 2025-12-16 03:42:53,635 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 19:43:23] 2025-12-16 03:42:53,635 | INFO     | update_server=False
[2025-12-15 19:43:23] 2025-12-16 03:42:53,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 19:43:23] 2025-12-16 03:42:53,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 19:43:23] 2025-12-16 03:42:53,798 | INFO     | all data control threads have been joined
[2025-12-15 19:43:23] 2025-12-16 03:42:54,108 | INFO     | all job control threads have been joined
[2025-12-15 19:43:23] 2025-12-16 03:42:54,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 19:43:23] 2025-12-16 03:42:54,197 | INFO     | aborting loop
[2025-12-15 19:43:23] 2025-12-16 03:42:54,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 19:43:23] 2025-12-16 03:42:54,639 | INFO     | [job] queue monitor thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:54,640 | INFO     | [job] retrieve thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:54,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:54,782 | INFO     | [payload] validate_post thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:54,799 | INFO     | [data] control thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:54,905 | INFO     | all payload control threads have been joined
[2025-12-15 19:43:23] 2025-12-16 03:42:54,936 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:55,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 19:43:23] 2025-12-16 03:42:55,114 | INFO     | [job] control thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:55,161 | INFO     | [data] copytool_in thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:55,202 | INFO     | [job] job monitor thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:55,341 | INFO     | [payload] failed_post thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:55,910 | INFO     | [payload] control thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:55,938 | INFO     | [job] validate thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:56,014 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:56,137 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:56,280 | INFO     | [data] copytool_out thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:42:59,117 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 19:43:23] 2025-12-16 03:43:13,691 | INFO     | [monitor] cgroup control has ended
[2025-12-15 19:43:23] 2025-12-16 03:43:15,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747877586752)>', '<ExcThread(monitor, started 139747338995456)>']
[2025-12-15 19:43:23] 2025-12-16 03:43:20,514 | INFO     | all workflow threads have been joined
[2025-12-15 19:43:23] 2025-12-16 03:43:20,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 19:43:23] 2025-12-16 03:43:20,515 | INFO     | traces error code: 0
[2025-12-15 19:43:23] 2025-12-16 03:43:20,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 19:43:23] 2025-12-16 03:43:23,735 | INFO     | PID=2939688 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 19:43:23] 2025-12-16 03:43:23,736 | INFO     | .. there are 28 such processes running
[2025-12-15 19:43:23] 2025-12-16 03:43:23,736 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 19:43:23] 2025-12-16 03:43:23,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 19:43:23] 2025-12-16 03:43:23,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 19:43:23] 2025-12-16 03:43:23,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 19:43:23] 2025-12-16 03:43:23,736 | CRITICAL | thread 'MainThread' is not alive
[2025-12-15 19:43:23] 2025-12-16 03:43:23,736 | INFO     | [monitor] control thread has ended
[2025-12-15 19:43:23] 2025-12-16 03:43:23,833 [wrapper] ==== pilot stdout END ====
[2025-12-15 19:43:23] 2025-12-16 03:43:23,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 19:43:23] 2025-12-16 03:43:23,837 [wrapper] pilotpid: 2939688
[2025-12-15 19:43:23] 2025-12-16 03:43:23,838 [wrapper] Pilot exit status: 0
[2025-12-15 19:43:23] 2025-12-16 03:43:23,845 [wrapper] pandaids: 6929807417
[2025-12-15 19:43:23] 2025-12-16 03:43:23,886 [wrapper] cleanup supervisor_pilot 2939694 2939689
[2025-12-15 19:43:23] 2025-12-16 03:43:23,889 [wrapper] Test setup, not cleaning
[2025-12-15 19:43:23] 2025-12-16 03:43:23,891 [wrapper] apfmon messages muted
[2025-12-15 19:43:23] 2025-12-16 03:43:23,892 [wrapper] ==== wrapper stdout END ====
[2025-12-15 19:43:23] 2025-12-16 03:43:23,894 [wrapper] ==== wrapper stderr END ====
[2025-12-15 19:43:23]  *** Error codes and diagnostics ***
[2025-12-15 19:43:23]     "exeErrorCode": 65,
[2025-12-15 19:43:23]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-15 19:43:23]     "pilotErrorCode": 1305,
[2025-12-15 19:43:23]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-15 19:43:23]  *** Listing of results directory ***
[2025-12-15 19:43:23] total 224700
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc    579449 Dec 15 07:52 pilot3.tar.gz
[2025-12-15 19:43:23] -rwx------. 1 boinc boinc     36322 Dec 15 07:52 runpilot2-wrapper.sh
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc      5112 Dec 15 07:53 queuedata.json
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc       100 Dec 15 19:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 19:43:23] -rwxr-xr-x. 1 boinc boinc      7986 Dec 15 19:40 run_atlas
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc       105 Dec 15 19:40 job.xml
[2025-12-15 19:43:23] -rw-r--r--. 2 boinc boinc    592386 Dec 15 19:40 input.tar.gz
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc      6595 Dec 15 19:40 init_data.xml
[2025-12-15 19:43:23] -rw-r--r--. 2 boinc boinc 225972195 Dec 15 19:40 EVNT.47898824._000077.pool.root.1
[2025-12-15 19:43:23] -rw-r--r--. 2 boinc boinc     15847 Dec 15 19:40 start_atlas.sh
[2025-12-15 19:43:23] drwxrwx--x. 2 boinc boinc      4096 Dec 15 19:40 shared
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc         0 Dec 15 19:40 boinc_lockfile
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc      2513 Dec 15 19:40 pandaJob.out
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc    994531 Dec 15 19:40 agis_schedconf.cvmfs.json
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc   1516240 Dec 15 19:40 agis_ddmendpoints.agis.ALL.json
[2025-12-15 19:43:23] drwx------. 5 boinc boinc      4096 Dec 15 19:40 pilot3
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc       960 Dec 15 19:40 memory_monitor_summary.json
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc     20703 Dec 15 19:40 log.47898826._001953.job.log.tgz.1
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc      8379 Dec 15 19:42 heartbeat.json
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc      8192 Dec 15 19:43 boinc_mmap_file
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc        22 Dec 15 19:43 wrapper_checkpoint.txt
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc       523 Dec 15 19:43 boinc_task_state.xml
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc        95 Dec 15 19:43 pilot_heartbeat.json
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc       893 Dec 15 19:43 pilotlog.txt
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc     81986 Dec 15 19:43 log.47898826._001953.job.log.1
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc       188 Dec 15 19:43 output.list
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc       620 Dec 15 19:43 runtime_log
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc    122880 Dec 15 19:43 result.tar.gz
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc      8636 Dec 15 19:43 runtime_log.err
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc       644 Dec 15 19:43 I60LDmf3Pp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKnTKDmIun1am.diag
[2025-12-15 19:43:23] -rw-r--r--. 1 boinc boinc     21614 Dec 15 19:43 stderr.txt
[2025-12-15 19:43:23] No HITS result produced
[2025-12-15 19:43:23]  *** Contents of shared directory: ***
[2025-12-15 19:43:23] total 221396
[2025-12-15 19:43:23] -rw-r--r--. 2 boinc boinc    592386 Dec 15 19:40 input.tar.gz
[2025-12-15 19:43:23] -rw-r--r--. 2 boinc boinc 225972195 Dec 15 19:40 ATLAS.root_0
[2025-12-15 19:43:23] -rw-r--r--. 2 boinc boinc     15847 Dec 15 19:40 start_atlas.sh
[2025-12-15 19:43:23] -rw-------. 1 boinc boinc    122880 Dec 15 19:43 result.tar.gz
19:43:25 (2935992): run_atlas exited; CPU time 20.592216
19:43:25 (2935992): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN