Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-16 02:59:53 (7428): vboxwrapper version 26210
2025-12-16 02:59:53 (7428): BOINC client version: 8.2.4
2025-12-16 02:59:55 (7428): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-12-16 02:59:55 (7428): Successfully copied 'init_data.xml' to the shared directory.
2025-12-16 02:59:56 (7428): Create VM. (boinc_265dc4abc2465168, slot#0)
2025-12-16 02:59:57 (7428): Setting Memory Size for VM. (4400MB)
2025-12-16 02:59:58 (7428): Setting CPU Count for VM. (4)
2025-12-16 02:59:58 (7428): Setting Chipset Options for VM.
2025-12-16 02:59:59 (7428): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-16 02:59:59 (7428): Setting Boot Options for VM.
2025-12-16 03:00:00 (7428): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-16 03:00:01 (7428): Enabling VM Network Access.
2025-12-16 03:00:01 (7428): Disabling USB Support for VM.
2025-12-16 03:00:02 (7428): Disabling COM Port Support for VM.
2025-12-16 03:00:02 (7428): Disabling LPT Port Support for VM.
2025-12-16 03:00:03 (7428): Disabling Audio Support for VM.
2025-12-16 03:00:04 (7428): Disabling Clipboard Support for VM.
2025-12-16 03:00:04 (7428): Disabling Drag and Drop Support for VM.
2025-12-16 03:00:04 (7428): Adding storage controller(s) to VM.
2025-12-16 03:00:05 (7428): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-16 03:00:06 (7428): Adding VirtualBox Guest Additions to VM.
2025-12-16 03:00:07 (7428): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-16 03:00:07 (7428): forwarding host port 53084 to guest port 80
2025-12-16 03:00:07 (7428): Enabling remote desktop for VM.
2025-12-16 03:00:07 (7428): Required extension pack not installed, remote desktop not enabled.
2025-12-16 03:00:07 (7428): Enabling shared directory for VM.
2025-12-16 03:00:08 (7428): Starting VM using VBoxManage interface. (boinc_265dc4abc2465168, slot#0)
2025-12-16 03:00:16 (7428): Successfully started VM. (PID = '6104')
2025-12-16 03:00:16 (7428): Reporting VM Process ID to BOINC.
2025-12-16 03:00:16 (7428): Guest Log: BIOS: VirtualBox 6.1.12
2025-12-16 03:00:16 (7428): Guest Log: CPUID EDX: 0x178bfbff
2025-12-16 03:00:16 (7428): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-16 03:00:16 (7428): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-16 03:00:16 (7428): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-16 03:00:16 (7428): Detected: Web Application Enabled (http://localhost:53084)
2025-12-16 03:00:16 (7428): Preference change detected
2025-12-16 03:00:16 (7428): Setting CPU throttle for VM. (100%)
2025-12-16 03:00:17 (7428): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-16 03:00:18 (7428): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-16 03:00:18 (7428): Guest Log: BIOS: Booting from Hard Disk...
2025-12-16 03:00:23 (7428): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-16 03:00:23 (7428): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-16 03:00:23 (7428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-16 03:00:43 (7428): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-16 03:00:43 (7428): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-12-16 03:01:29 (7428): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-16 03:01:29 (7428): Guest Log: 00:00:00.000516 main     Log opened 2025-12-16T03:01:27.797129000Z
2025-12-16 03:01:29 (7428): Guest Log: 00:00:00.000992 main     OS Product: Linux
2025-12-16 03:01:29 (7428): Guest Log: 00:00:00.001169 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-16 03:01:29 (7428): Guest Log: 00:00:00.001292 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-16 03:01:29 (7428): Guest Log: 00:00:00.001414 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-16 03:01:29 (7428): Guest Log: 00:00:00.001418 main     Process ID: 1327
2025-12-16 03:01:29 (7428): Guest Log: 00:00:00.001421 main     Package type: LINUX_64BITS_GENERIC
2025-12-16 03:01:29 (7428): Guest Log: 00:00:00.006601 main     5.2.32 r132073 started. Verbose level = 0
2025-12-16 03:01:30 (7428): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-16 03:01:30 (7428): Guest Log: [INFO] Mounting shared directory
2025-12-16 03:01:30 (7428): Guest Log: [INFO] Checking for init_data.xml
2025-12-16 03:01:39 (7428): Guest Log: 00:00:10.032413 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 164 546 000ns (GuestNow=1 765 872 098 974 639 000 ns GuestLast=1 765 854 087 810 093 000 ns fSetTimeLastLoop=true )
2025-12-16 03:03:01 (7428): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-16 03:03:01 (7428): Guest Log: [INFO] Detected branch: prod
2025-12-16 03:03:01 (7428): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-16 03:03:01 (7428): Guest Log: Copying input files
2025-12-16 03:03:09 (7428): Guest Log: Copied input files into RunAtlas.
2025-12-16 03:03:09 (7428): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-16 03:03:09 (7428): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-16 03:03:09 (7428): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-16 03:03:09 (7428): Guest Log: Further information can be found at the LHC@home message board.
2025-12-16 03:03:19 (7428): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-16 03:03:20 (7428): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-16 03:03:20 (7428): Guest Log: 2.6.3.0 1623 0 30172 154063 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-16 03:03:25 (7428): Guest Log: copied the webapp to /var/www
2025-12-16 03:03:25 (7428): Guest Log: ATHENA_PROC_NUMBER=4
2025-12-16 03:03:25 (7428): Guest Log: ATHENA_CORE_NUMBER=4
2025-12-16 03:03:26 (7428): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-16 03:03:26 (7428): Guest Log:  *** Starting ATLAS job. (PandaID=6929808548 taskID=47898826) ***
2025-12-16 04:43:41 (7428): Status Report: Elapsed Time: '6000.932806'
2025-12-16 04:43:41 (7428): Status Report: CPU Time: '17627.031250'
2025-12-16 06:30:35 (7428): Status Report: Elapsed Time: '12001.037102'
2025-12-16 06:30:35 (7428): Status Report: CPU Time: '42947.812500'
2025-12-16 08:16:17 (7428): Status Report: Elapsed Time: '18001.989090'
2025-12-16 08:16:17 (7428): Status Report: CPU Time: '68131.093750'
2025-12-16 09:37:22 (7428): Guest Log:  *** Job finished ***
2025-12-16 09:37:22 (7428): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:36:46,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:36:46,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:14,330 | INFO     | [monitor] cgroup control has ended
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:15,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920622528320)>', '<ExcThread(monitor, started 139919934600960)>']
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:16,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:16,279 | INFO     | [monitor] control thread has ended
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:20,469 | INFO     | all workflow threads have been joined
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:20,476 | INFO     | end of generic workflow (traces error code: 0)
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:20,484 | INFO     | traces error code: 0
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:20,490 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:21,040 [wrapper] ==== pilot stdout END ====
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:21,091 [wrapper] ==== wrapper stdout RESUME ====
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:21,105 [wrapper] pilotpid: 6013
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:21,120 [wrapper] Pilot exit status: 0
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:21,216 [wrapper] pandaids: 6929808548
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:21,456 [wrapper] cleanup supervisor_pilot 29579 6014
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:21,478 [wrapper] Test setup, not cleaning
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:21,487 [wrapper] apfmon messages muted
2025-12-16 09:37:22 (7428): Guest Log: 2025-12-16 14:37:21,497 [wrapper] ==== wrapper stdout END ====
2025-12-16 09:37:23 (7428): Guest Log: 2025-12-16 14:37:21,537 [wrapper] ==== wrapper stderr END ====
2025-12-16 09:37:23 (7428): Guest Log:  *** Error codes and diagnostics ***
2025-12-16 09:37:23 (7428): Guest Log:     "exeErrorCode": 0,
2025-12-16 09:37:23 (7428): Guest Log:     "exeErrorDiag": "",
2025-12-16 09:37:23 (7428): Guest Log:     "pilotErrorCode": 0,
2025-12-16 09:37:23 (7428): Guest Log:     "pilotErrorDiag": "",
2025-12-16 09:37:23 (7428): Guest Log:  *** Listing of results directory ***
2025-12-16 09:37:23 (7428): Guest Log: total 227304
2025-12-16 09:37:23 (7428): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 15 15:55 runpilot2-wrapper.sh
2025-12-16 09:37:23 (7428): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 15 15:57 queuedata.json
2025-12-16 09:37:23 (7428): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 15 15:57 pilot3.tar.gz
2025-12-16 09:37:23 (7428): Guest Log: -rwxr-xr-x. 1 atlas atlas      7947 Dec 16 08:03 init_data.xml
2025-12-16 09:37:23 (7428): Guest Log: -rwxr-xr-x. 1 atlas atlas    592394 Dec 16 08:03 input.tar.gz
2025-12-16 09:37:23 (7428): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 16 08:03 start_atlas.sh
2025-12-16 09:37:23 (7428): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 16 08:03 EVNT.47898824._000096.pool.root.1 -> /data/./ATLAS.root_0
2025-12-16 09:37:23 (7428): Guest Log: -rw-r--r--. 1 atlas atlas      2513 Dec 16 08:03 pandaJob.out
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas    994531 Dec 16 08:05 agis_schedconf.cvmfs.json
2025-12-16 09:37:23 (7428): Guest Log: drwx------. 5 atlas atlas      4096 Dec 16 08:05 pilot3
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas 221746273 Dec 16 14:34 HITS.47898826._002430.pool.root.1
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas      1029 Dec 16 14:35 memory_monitor_summary.json
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 16 14:35 agis_ddmendpoints.agis.ALL.json
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas    508731 Dec 16 14:35 log.47898826._002430.job.log.tgz.1
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas      7817 Dec 16 14:36 heartbeat.json
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas        95 Dec 16 14:36 pilot_heartbeat.json
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas      4805 Dec 16 14:37 pilotlog.txt
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas   3075578 Dec 16 14:37 log.47898826._002430.job.log.1
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas       357 Dec 16 14:37 output.list
2025-12-16 09:37:23 (7428): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 16 14:37 runtime_log
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas   3604480 Dec 16 14:37 result.tar.gz
2025-12-16 09:37:23 (7428): Guest Log: -rw-r--r--. 1 atlas atlas      8774 Dec 16 14:37 runtime_log.err
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas       667 Dec 16 14:37 6pDMDmZ6Pp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSuTKDmJYMPGn.diag
2025-12-16 09:37:23 (7428): Guest Log: Looking for outputfile HITS.47898826._002430.pool.root.1
2025-12-16 09:37:23 (7428): Guest Log: HITS file was successfully produced
2025-12-16 09:37:23 (7428): Guest Log: -rw-------. 1 atlas atlas 221746273 Dec 16 14:34 /home/atlas/RunAtlas/HITS.47898826._002430.pool.root.1
2025-12-16 09:37:28 (7428): Guest Log: Successfully finished the ATLAS job!
2025-12-16 09:37:28 (7428): Guest Log: Copying the results back to the shared directory!
2025-12-16 09:37:28 (7428): Guest Log:  *** Contents of shared directory: ***
2025-12-16 09:37:28 (7428): Guest Log: total 441096
2025-12-16 09:37:28 (7428): Guest Log: -rwxrwxrwx. 1 root root 225708090 Dec 16 07:59 ATLAS.root_0
2025-12-16 09:37:28 (7428): Guest Log: -rwxrwxrwx. 1 root root 221746273 Dec 16 14:37 HITS.pool.root.1
2025-12-16 09:37:28 (7428): Guest Log: -rwxrwxrwx. 1 root root      7947 Dec 16 07:59 init_data.xml
2025-12-16 09:37:28 (7428): Guest Log: -rwxrwxrwx. 1 root root    592394 Dec 16 03:13 input.tar.gz
2025-12-16 09:37:28 (7428): Guest Log: -rwxrwxrwx. 1 root root   3604480 Dec 16 14:37 result.tar.gz
2025-12-16 09:37:28 (7428): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 16 03:13 start_atlas.sh
2025-12-16 09:37:28 (7428): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-16 09:37:28 (7428): VM Completion File Detected.
2025-12-16 09:37:28 (7428): Powering off VM.
2025-12-16 09:37:33 (7428): Successfully stopped VM.
2025-12-16 09:37:33 (7428): Deregistering VM. (boinc_265dc4abc2465168, slot#0)
2025-12-16 09:37:33 (7428): Removing network bandwidth throttle group from VM.
2025-12-16 09:37:34 (7428): Removing VM from VirtualBox.
2025-12-16 09:37:40 (7428): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN