Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:37:16 (61679): wrapper (7.7.26015): starting
15:37:16 (61679): wrapper: running run_atlas (--nthreads 3)
[2025-12-16 15:37:16] Arguments: --nthreads 3
[2025-12-16 15:37:16] Threads: 3
[2025-12-16 15:37:16] Checking for CVMFS
[2025-12-16 15:37:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 15:37:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 15:37:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 15:37:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 15:37:16] 2.9.2.0 3010767 4754 88608 154073 2 57 23307368 36864000 0 130560 0 3284127 99.990 168438 15441 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 15:37:16] CVMFS is ok
[2025-12-16 15:37:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 15:37:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 15:37:16] Further information can be found at the LHC@home message board.
[2025-12-16 15:37:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 15:37:16] Checking for apptainer binary...
[2025-12-16 15:37:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 15:37:16] Running /usr/bin/apptainer --version
[2025-12-16 15:37:16] apptainer version 1.4.1-1.1
[2025-12-16 15:37:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 15:37:16] thA367a
[2025-12-16 15:37:16] apptainer works
[2025-12-16 15:37:16] Set ATHENA_PROC_NUMBER=3
[2025-12-16 15:37:16] Set ATHENA_CORE_NUMBER=3
[2025-12-16 15:37:16] Starting ATLAS job with PandaID=6929525628
[2025-12-16 15:37:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 17:33:38]  *** The last 200 lines of the pilot log: ***
[2025-12-16 17:33:38] 2025-12-16 16:33:01,582 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 17:33:38] 2025-12-16 16:33:02,605 | INFO     | monitor loop #534: job 0:6929525628 is in state 'finished'
[2025-12-16 17:33:38] 2025-12-16 16:33:02,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 17:33:38] 2025-12-16 16:33:03,233 | INFO     | time since job start (6941s) is within the limit (174528.0s)
[2025-12-16 17:33:38] 2025-12-16 16:33:04,291 | INFO     | PID=65401 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 17:33:38] 2025-12-16 16:33:05,108 | INFO     | monitor loop #535: job 0:6929525628 is in state 'finished'
[2025-12-16 17:33:38] 2025-12-16 16:33:05,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,291 | INFO     | time since job start (6943s) is within the limit (174528.0s)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,744 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 17:33:38] 2025-12-16 16:33:05,745 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3662.1275000000005
[2025-12-16 17:33:38] 2025-12-16 16:33:05,746 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6929525628/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,746 | INFO     | extracted standard info from prmon json
[2025-12-16 17:33:38] 2025-12-16 16:33:05,746 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 17:33:38] 2025-12-16 16:33:05,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 17:33:38] 2025-12-16 16:33:05,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 17:33:38] 2025-12-16 16:33:05,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 17:33:38] 2025-12-16 16:33:05,747 | INFO     | fitting pss+swap vs Time
[2025-12-16 17:33:38] 2025-12-16 16:33:05,747 | INFO     | sum of square deviations: 459366752.5
[2025-12-16 17:33:38] 2025-12-16 16:33:05,747 | INFO     | sum of deviations: -3833623781.5000005
[2025-12-16 17:33:38] 2025-12-16 16:33:05,747 | INFO     | mean x: 1765899308.5
[2025-12-16 17:33:38] 2025-12-16 16:33:05,747 | INFO     | mean y: 2379491.745614035
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | intersect: 14739609706.942795
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | chi2: 1.582904566715465
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | sum of square deviations: 401533110.0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | sum of deviations: -3474465267.000001
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | mean x: 1765899156.0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | mean y: 2380439.4128440367
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | intersect: 15282702608.975939
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | chi2: 1.582002176685543
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | current chi2=1.582002176685543 (change=0.057008492419385666 %)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | right removable region: 108
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | sum of square deviations: 401533110.0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | sum of deviations: -17123644707.0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | mean x: 1765899461.0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | mean y: 2413510.9541284405
[2025-12-16 17:33:38] 2025-12-16 16:33:05,748 | INFO     | intersect: 75310362482.95
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | chi2: 0.14460978671563518
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | current chi2=0.14460978671563518 (change=90.86427635901632 %)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | sum of square deviations: 348769330.0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | sum of deviations: -12131103214.5
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | mean x: 1765899613.5
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | mean y: 2399059.278846154
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | intersect: 61424974484.17116
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | chi2: 0.1191709270827738
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | current chi2=0.1191709270827738 (change=17.59138175266456 %)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | left removable region: 20
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | sum of square deviations: 211285822.0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | sum of deviations: -3488887863.0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | mean x: 1765899735.5
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | mean y: 2372020.4318181816
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | intersect: 29162048217.071552
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | chi2: 0.04694588172925023
[2025-12-16 17:33:38] 2025-12-16 16:33:05,749 | INFO     | current memory leak: -16.51 B/s (using 88 data points, chi2=0.05)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | could have reported an average CPU frequency of 3929 MHz (7 samples)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | ..............................
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | . Timing measurements:
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | . get job = 0 s
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | . initial setup = 1 s
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | . payload setup = 2 s
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | . stage-in = 0 s
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | . payload execution = 6914 s
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | . stage-out = 0 s
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | . log creation = 0 s
[2025-12-16 17:33:38] 2025-12-16 16:33:05,750 | INFO     | ..............................
[2025-12-16 17:33:38] 2025-12-16 16:33:05,779 | INFO     | 
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | job summary report
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | --------------------------------------------------
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | PanDA job id: 6929525628
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | task id: 47898763
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | errors: (none)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | pilot state: finished 
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | transexitcode: 0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | exeerrorcode: 0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | exeerrordiag: 
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | exitcode: 0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | exitmsg: OK
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | cpuconsumptiontime: 20056 s
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | nevents: 400
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | neventsw: 0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | pid: 71864
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | pgrp: 71864
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | corecount: 3
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | event service: False
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | sizes: {0: 2283961, 2: 2284223, 11: 2284251, 6921: 2320604, 6923: 2320604, 6930: 2320798}
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | --------------------------------------------------
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | 
[2025-12-16 17:33:38] 2025-12-16 16:33:05,780 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-16 17:33:38] 2025-12-16 16:33:05,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | job 6929525628 has completed (purged errors)
[2025-12-16 17:33:38] 2025-12-16 16:33:05,792 | INFO     | overall cleanup function is called
[2025-12-16 17:33:38] 2025-12-16 16:33:06,799 | INFO     | --- collectZombieJob: --- 10, [71864]
[2025-12-16 17:33:38] 2025-12-16 16:33:06,799 | INFO     | zombie collector waiting for pid 71864
[2025-12-16 17:33:38] 2025-12-16 16:33:06,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 17:33:38] 2025-12-16 16:33:06,799 | INFO     | collected zombie processes
[2025-12-16 17:33:38] 2025-12-16 16:33:06,799 | INFO     | will attempt to kill all subprocesses of pid=71864
[2025-12-16 17:33:38] 2025-12-16 16:33:06,842 | INFO     | process IDs to be killed: [71864] (in reverse order)
[2025-12-16 17:33:38] 2025-12-16 16:33:06,866 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 17:33:38] 2025-12-16 16:33:06,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 17:33:38] 2025-12-16 16:33:06,868 | INFO     | did not find any defunct processes belonging to 71864
[2025-12-16 17:33:38] 2025-12-16 16:33:06,869 | INFO     | did not find any defunct processes belonging to 71864
[2025-12-16 17:33:38] 2025-12-16 16:33:06,869 | INFO     | ready for new job
[2025-12-16 17:33:38] 2025-12-16 16:33:06,869 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 17:33:38] 2025-12-16 16:33:06,870 | INFO     | ***************************************
[2025-12-16 17:33:38] 2025-12-16 16:33:06,870 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 17:33:38] 2025-12-16 16:33:06,870 | INFO     | ***************************************
[2025-12-16 17:33:38] 2025-12-16 16:33:06,870 | INFO     | 
[2025-12-16 17:33:38] 2025-12-16 16:33:06,870 | INFO     | architecture information:
[2025-12-16 17:33:38] 2025-12-16 16:33:06,871 | INFO     | executing command: cat /etc/os-release
[2025-12-16 17:33:38] 2025-12-16 16:33:06,879 | INFO     | cat /etc/os-release:
[2025-12-16 17:33:38] NAME="CentOS Linux"
[2025-12-16 17:33:38] VERSION="7 (Core)"
[2025-12-16 17:33:38] ID="centos"
[2025-12-16 17:33:38] ID_LIKE="rhel fedora"
[2025-12-16 17:33:38] VERSION_ID="7"
[2025-12-16 17:33:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 17:33:38] ANSI_COLOR="0;31"
[2025-12-16 17:33:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 17:33:38] HOME_URL="https://www.centos.org/"
[2025-12-16 17:33:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 17:33:38] 
[2025-12-16 17:33:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 17:33:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 17:33:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 17:33:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 17:33:38] 
[2025-12-16 17:33:38] 2025-12-16 16:33:06,879 | INFO     | ***************************************
[2025-12-16 17:33:38] 2025-12-16 16:33:07,382 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-16 17:33:38] 2025-12-16 16:33:07,394 | INFO     | sufficient remaining disk space (236609077248 B)
[2025-12-16 17:33:38] 2025-12-16 16:33:07,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 17:33:38] 2025-12-16 16:33:07,394 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 17:33:38] 2025-12-16 16:33:07,394 | INFO     | update_server=False
[2025-12-16 17:33:38] 2025-12-16 16:33:07,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 17:33:38] 2025-12-16 16:33:07,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 17:33:38] 2025-12-16 16:33:07,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 17:33:38] 2025-12-16 16:33:07,612 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 17:33:38] 2025-12-16 16:33:07,612 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 17:33:38] 2025-12-16 16:33:07,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 17:33:38] 2025-12-16 16:33:07,612 | INFO     | will abort loop
[2025-12-16 17:33:38] 2025-12-16 16:33:08,049 | INFO     | all job control threads have been joined
[2025-12-16 17:33:38] 2025-12-16 16:33:08,111 | INFO     | all data control threads have been joined
[2025-12-16 17:33:38] 2025-12-16 16:33:08,400 | INFO     | [job] retrieve thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:08,400 | INFO     | [job] queue monitor thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:08,447 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:08,618 | INFO     | [job] job monitor thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:08,704 | INFO     | all payload control threads have been joined
[2025-12-16 17:33:38] 2025-12-16 16:33:08,947 | INFO     | [payload] failed_post thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:09,054 | INFO     | [job] control thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:09,117 | INFO     | [data] control thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:09,141 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:09,318 | INFO     | [data] copytool_in thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:09,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 17:33:38] 2025-12-16 16:33:09,400 | INFO     | [data] copytool_out thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:09,440 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:09,710 | INFO     | [payload] control thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:09,856 | INFO     | [job] validate thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:09,856 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:09,983 | INFO     | [payload] validate_post thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:13,333 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 17:33:38] 2025-12-16 16:33:30,056 | INFO     | [monitor] cgroup control has ended
[2025-12-16 17:33:38] 2025-12-16 16:33:31,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273400772416)>', '<ExcThread(monitor, started 140272658790144)>']
[2025-12-16 17:33:38] 2025-12-16 16:33:36,265 | INFO     | all workflow threads have been joined
[2025-12-16 17:33:38] 2025-12-16 16:33:36,265 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 17:33:38] 2025-12-16 16:33:36,265 | INFO     | traces error code: 0
[2025-12-16 17:33:38] 2025-12-16 16:33:36,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 17:33:38] 2025-12-16 16:33:38,405 | INFO     | PID=65401 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 17:33:38] 2025-12-16 16:33:38,405 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 17:33:38] 2025-12-16 16:33:38,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 17:33:38] 2025-12-16 16:33:38,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 17:33:38] 2025-12-16 16:33:38,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 17:33:38] 2025-12-16 16:33:38,405 | INFO     | [monitor] control thread has ended
[2025-12-16 17:33:38] 2025-12-16 16:33:38,452 [wrapper] ==== pilot stdout END ====
[2025-12-16 17:33:38] 2025-12-16 16:33:38,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 17:33:38] 2025-12-16 16:33:38,457 [wrapper] pilotpid: 65401
[2025-12-16 17:33:38] 2025-12-16 16:33:38,459 [wrapper] Pilot exit status: 0
[2025-12-16 17:33:38] 2025-12-16 16:33:38,466 [wrapper] pandaids: 6929525628
[2025-12-16 17:33:38] 2025-12-16 16:33:38,482 [wrapper] cleanup supervisor_pilot   86740 65402
[2025-12-16 17:33:38] 2025-12-16 16:33:38,485 [wrapper] Test setup, not cleaning
[2025-12-16 17:33:38] 2025-12-16 16:33:38,487 [wrapper] apfmon messages muted
[2025-12-16 17:33:38] 2025-12-16 16:33:38,489 [wrapper] ==== wrapper stdout END ====
[2025-12-16 17:33:38] 2025-12-16 16:33:38,491 [wrapper] ==== wrapper stderr END ====
[2025-12-16 17:33:38]  *** Error codes and diagnostics ***
[2025-12-16 17:33:38]     "exeErrorCode": 0,
[2025-12-16 17:33:38]     "exeErrorDiag": "",
[2025-12-16 17:33:38]     "pilotErrorCode": 0,
[2025-12-16 17:33:38]     "pilotErrorDiag": "",
[2025-12-16 17:33:38]  *** Listing of results directory ***
[2025-12-16 17:33:38] total 444400
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc    579449 Dec 15 06:25 pilot3.tar.gz
[2025-12-16 17:33:38] -rwx------ 1 boinc boinc     36322 Dec 15 06:26 runpilot2-wrapper.sh
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc      5112 Dec 15 06:27 queuedata.json
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc       100 Dec 16 15:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 17:33:38] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 15:37 run_atlas
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc       105 Dec 16 15:37 job.xml
[2025-12-16 17:33:38] -rw-r--r-- 2 boinc boinc 226431781 Dec 16 15:37 EVNT.47898761._000624.pool.root.1
[2025-12-16 17:33:38] drwxrwx--x 2 boinc boinc      4096 Dec 16 15:37 shared
[2025-12-16 17:33:38] -rw-r--r-- 2 boinc boinc    592399 Dec 16 15:37 input.tar.gz
[2025-12-16 17:33:38] -rw-r--r-- 2 boinc boinc     15847 Dec 16 15:37 start_atlas.sh
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc         0 Dec 16 15:37 boinc_setup_complete
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc      6441 Dec 16 15:37 init_data.xml
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc         0 Dec 16 15:37 boinc_lockfile
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc      2508 Dec 16 15:37 pandaJob.out
[2025-12-16 17:33:38] -rw------- 1 boinc boinc    987355 Dec 16 15:37 agis_schedconf.cvmfs.json
[2025-12-16 17:33:38] -rw------- 1 boinc boinc   1516240 Dec 16 15:37 agis_ddmendpoints.agis.ALL.json
[2025-12-16 17:33:38] drwx------ 5 boinc boinc      4096 Dec 16 15:37 pilot3
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc       529 Dec 16 17:32 boinc_task_state.xml
[2025-12-16 17:33:38] -rw------- 1 boinc boinc 222151719 Dec 16 17:32 HITS.47898763._014349.pool.root.1
[2025-12-16 17:33:38] -rw------- 1 boinc boinc      1023 Dec 16 17:32 memory_monitor_summary.json
[2025-12-16 17:33:38] -rw------- 1 boinc boinc        95 Dec 16 17:32 pilot_heartbeat.json
[2025-12-16 17:33:38] -rw------- 1 boinc boinc    288536 Dec 16 17:32 log.47898763._014349.job.log.tgz.1
[2025-12-16 17:33:38] -rw------- 1 boinc boinc      7760 Dec 16 17:33 heartbeat.json
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc      8192 Dec 16 17:33 boinc_mmap_file
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc        27 Dec 16 17:33 wrapper_checkpoint.txt
[2025-12-16 17:33:38] -rw------- 1 boinc boinc       745 Dec 16 17:33 pilotlog.txt
[2025-12-16 17:33:38] -rw------- 1 boinc boinc    997842 Dec 16 17:33 log.47898763._014349.job.log.1
[2025-12-16 17:33:38] -rw------- 1 boinc boinc       357 Dec 16 17:33 output.list
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc       620 Dec 16 17:33 runtime_log
[2025-12-16 17:33:38] -rw------- 1 boinc boinc   1300480 Dec 16 17:33 result.tar.gz
[2025-12-16 17:33:38] -rw------- 1 boinc boinc       660 Dec 16 17:33 eJhNDmoHGp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIJXKDmLqldwn.diag
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc      8902 Dec 16 17:33 runtime_log.err
[2025-12-16 17:33:38] -rw-r--r-- 1 boinc boinc     21458 Dec 16 17:33 stderr.txt
[2025-12-16 17:33:38] HITS file was successfully produced:
[2025-12-16 17:33:38] -rw------- 1 boinc boinc 222151719 Dec 16 17:32 shared/HITS.pool.root.1
[2025-12-16 17:33:38]  *** Contents of shared directory: ***
[2025-12-16 17:33:38] total 439952
[2025-12-16 17:33:38] -rw-r--r-- 2 boinc boinc 226431781 Dec 16 15:37 ATLAS.root_0
[2025-12-16 17:33:38] -rw-r--r-- 2 boinc boinc    592399 Dec 16 15:37 input.tar.gz
[2025-12-16 17:33:38] -rw-r--r-- 2 boinc boinc     15847 Dec 16 15:37 start_atlas.sh
[2025-12-16 17:33:38] -rw------- 1 boinc boinc 222151719 Dec 16 17:32 HITS.pool.root.1
[2025-12-16 17:33:38] -rw------- 1 boinc boinc   1300480 Dec 16 17:33 result.tar.gz
17:33:40 (61679): run_atlas exited; CPU time 20084.934770
17:33:40 (61679): called boinc_finish(0)

</stderr_txt>
]]>

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