Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:00 (662244): wrapper (7.7.26015): starting
18:33:00 (662244): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 18:33:00] Arguments: --nthreads 8
[2025-12-15 18:33:00] Threads: 8
[2025-12-15 18:33:00] Checking for CVMFS
[2025-12-15 18:33:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 18:33:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 18:33:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 18:33:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 18:33:02] 2.11.3.0 767685 21514 218564 154054 1 494 26564558 45568000 11625 130560 0 90480986 99.785 55280586 19170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-15 18:33:02] CVMFS is ok
[2025-12-15 18:33:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 18:33:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 18:33:02] Further information can be found at the LHC@home message board.
[2025-12-15 18:33:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 18:33:02] Checking for apptainer binary...
[2025-12-15 18:33:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 18:33:02] Running /usr/bin/apptainer --version
[2025-12-15 18:33:02] apptainer version 1.4.1-1.el9
[2025-12-15 18:33:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 18:33:03] wns0005.triumf.lcg
[2025-12-15 18:33:03] apptainer works
[2025-12-15 18:33:03] Set ATHENA_PROC_NUMBER=8
[2025-12-15 18:33:03] Set ATHENA_CORE_NUMBER=8
[2025-12-15 18:33:03] Starting ATLAS job with PandaID=6930225514
[2025-12-15 18:33:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 18:39:49]  *** The last 200 lines of the pilot log: ***
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 18:39:49] 2025-12-16 02:38:46,380 | WARNING  | wrong length of table data, x=[1765852517.0, 1765852578.0], y=[1080.0, 469469.0] (must be same and length>=4)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | ..............................
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . Timing measurements:
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . get job = 0 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . initial setup = 4 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . payload setup = 23 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . stage-in = 0 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,390 | INFO     | . payload execution = 93 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,390 | INFO     | . stage-out = 1 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,390 | INFO     | . log creation = 0 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,408 | INFO     | ..............................
[2025-12-15 18:39:49] 2025-12-16 02:38:46,408 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 18:39:49] 2025-12-16 02:38:46,408 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930225514/pilotlog.txt
[2025-12-15 18:39:49] 2025-12-16 02:38:46,426 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-15 18:39:49] - Log from pilotlog.txt -
[2025-12-15 18:39:49] 2025-12-16 02:38:46,378 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6930225514/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,378 | INFO     | extracted standard info from prmon json
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 18:39:49] 2025-12-16 02:38:46,380 | WARNING  | wrong length of table data, x=[1765852517.0, 1765852578.0], y=[1080.0, 469469.0] (must be same and length>=4)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | ..............................
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . Timing measurements:
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . get job = 0 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . initial setup = 4 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . payload setup = 23 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . stage-in = 0 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,390 | INFO     | . payload execution = 93 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,390 | INFO     | . stage-out = 1 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,390 | INFO     | . log creation = 0 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,408 | INFO     | ..............................
[2025-12-15 18:39:49] 2025-12-16 02:38:46,408 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 18:39:49] 2025-12-16 02:38:46,408 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930225514/pilotlog.txt
[2025-12-15 18:39:49] 2025-12-16 02:38:46,427 | WARNING  | 
[2025-12-15 18:39:49] [begin log extracts]
[2025-12-15 18:39:49] - Log from pilotlog.txt -
[2025-12-15 18:39:49] 2025-12-16 02:38:46,378 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6930225514/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,378 | INFO     | extracted standard info from prmon json
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 18:39:49] 2025-12-16 02:38:46,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 18:39:49] 2025-12-16 02:38:46,380 | WARNING  | wrong length of table data, x=[1765852517.0, 1765852578.0], y=[1080.0, 469469.0] (must be same and length>=4)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | ..............................
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . Timing measurements:
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . get job = 0 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . initial setup = 4 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . payload setup = 23 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,389 | INFO     | . stage-in = 0 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,390 | INFO     | . payload execution = 93 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,390 | INFO     | . stage-out = 1 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,390 | INFO     | . log creation = 0 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,408 | INFO     | ..............................
[2025-12-15 18:39:49] 2025-12-16 02:38:46,408 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 18:39:49] 2025-12-16 02:38:46,408 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930225514/pilotlog.txt
[2025-12-15 18:39:49] [end log extracts]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,427 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,428 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-15 18:39:49] 2025-12-16 02:38:46,555 | INFO     | 
[2025-12-15 18:39:49] 2025-12-16 02:38:46,555 | INFO     | job summary report
[2025-12-15 18:39:49] 2025-12-16 02:38:46,555 | INFO     | --------------------------------------------------
[2025-12-15 18:39:49] 2025-12-16 02:38:46,555 | INFO     | PanDA job id: 6930225514
[2025-12-15 18:39:49] 2025-12-16 02:38:46,555 | INFO     | task id: 47886831
[2025-12-15 18:39:49] 2025-12-16 02:38:46,555 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-15 18:36:16,234 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | pilot state: failed 
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | transexitcode: 65
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | exeerrorcode: 65
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | exitcode: 65
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | cpuconsumptiontime: 20 s
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | nevents: 0
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | neventsw: 0
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | pid: 685986
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | pgrp: 685986
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | corecount: 8
[2025-12-15 18:39:49] 2025-12-16 02:38:46,556 | INFO     | event service: False
[2025-12-15 18:39:49] 2025-12-16 02:38:46,557 | INFO     | sizes: {0: 2283165, 1: 2284018, 2: 2284018, 13: 2284046, 15: 2284364, 24: 2284392, 121: 2307681, 124: 2311973, 127: 2312029, 260: 2312195}
[2025-12-15 18:39:49] 2025-12-16 02:38:46,557 | INFO     | --------------------------------------------------
[2025-12-15 18:39:49] 2025-12-16 02:38:46,557 | INFO     | 
[2025-12-15 18:39:49] 2025-12-16 02:38:46,557 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-15 18:39:49] 2025-12-16 02:38:46,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 18:39:49] 2025-12-16 02:38:46,630 | INFO     | job 6930225514 has completed (purged errors)
[2025-12-15 18:39:49] 2025-12-16 02:38:46,630 | INFO     | overall cleanup function is called
[2025-12-15 18:39:49] 2025-12-16 02:38:47,637 | INFO     | --- collectZombieJob: --- 10, [685986]
[2025-12-15 18:39:49] 2025-12-16 02:38:47,637 | INFO     | zombie collector waiting for pid 685986
[2025-12-15 18:39:49] 2025-12-16 02:38:47,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 18:39:49] 2025-12-16 02:38:47,637 | INFO     | collected zombie processes
[2025-12-15 18:39:49] 2025-12-16 02:38:47,637 | INFO     | will attempt to kill all subprocesses of pid=685986
[2025-12-15 18:39:49] 2025-12-16 02:38:48,946 | INFO     | process IDs to be killed: [685986] (in reverse order)
[2025-12-15 18:39:49] 2025-12-16 02:38:49,143 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 18:39:49] 2025-12-16 02:38:49,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 18:39:49] 2025-12-16 02:38:49,236 | INFO     | did not find any defunct processes belonging to 685986
[2025-12-15 18:39:49] 2025-12-16 02:38:49,261 | INFO     | did not find any defunct processes belonging to 685986
[2025-12-15 18:39:49] 2025-12-16 02:38:49,262 | INFO     | ready for new job
[2025-12-15 18:39:49] 2025-12-16 02:38:49,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 18:39:49] 2025-12-16 02:38:49,263 | INFO     | ***************************************
[2025-12-15 18:39:49] 2025-12-16 02:38:49,263 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 18:39:49] 2025-12-16 02:38:49,263 | INFO     | ***************************************
[2025-12-15 18:39:49] 2025-12-16 02:38:49,263 | INFO     | 
[2025-12-15 18:39:49] 2025-12-16 02:38:49,272 | INFO     | architecture information:
[2025-12-15 18:39:49] 2025-12-16 02:38:49,276 | INFO     | executing command: cat /etc/os-release
[2025-12-15 18:39:49] 2025-12-16 02:38:49,305 | INFO     | cat /etc/os-release:
[2025-12-15 18:39:49] NAME="CentOS Linux"
[2025-12-15 18:39:49] VERSION="7 (Core)"
[2025-12-15 18:39:49] ID="centos"
[2025-12-15 18:39:49] ID_LIKE="rhel fedora"
[2025-12-15 18:39:49] VERSION_ID="7"
[2025-12-15 18:39:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 18:39:49] ANSI_COLOR="0;31"
[2025-12-15 18:39:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 18:39:49] HOME_URL="https://www.centos.org/"
[2025-12-15 18:39:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 18:39:49] 
[2025-12-15 18:39:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 18:39:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 18:39:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 18:39:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 18:39:49] 
[2025-12-15 18:39:49] 2025-12-16 02:38:49,305 | INFO     | ***************************************
[2025-12-15 18:39:49] 2025-12-16 02:38:49,809 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-15 18:39:49] 2025-12-16 02:38:49,949 | INFO     | sufficient remaining disk space (1306786791424 B)
[2025-12-15 18:39:49] 2025-12-16 02:38:49,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 18:39:49] 2025-12-16 02:38:49,950 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 18:39:49] 2025-12-16 02:38:49,950 | INFO     | update_server=False
[2025-12-15 18:39:49] 2025-12-16 02:38:49,950 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 18:39:49] 2025-12-16 02:38:49,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 18:39:49] 2025-12-16 02:38:49,960 | INFO     | aborting loop
[2025-12-15 18:39:49] 2025-12-16 02:38:49,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 18:39:49] 2025-12-16 02:38:50,192 | INFO     | all job control threads have been joined
[2025-12-15 18:39:49] 2025-12-16 02:38:50,366 | INFO     | all data control threads have been joined
[2025-12-15 18:39:49] 2025-12-16 02:38:50,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 18:39:49] 2025-12-16 02:38:50,957 | INFO     | [job] retrieve thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:50,962 | INFO     | [data] copytool_in thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:50,966 | INFO     | [job] job monitor thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:51,122 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:51,198 | INFO     | [job] control thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:51,218 | INFO     | all payload control threads have been joined
[2025-12-15 18:39:49] 2025-12-16 02:38:51,349 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:51,372 | INFO     | [data] control thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:51,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 18:39:49] 2025-12-16 02:38:51,651 | INFO     | [payload] validate_post thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:51,734 | INFO     | [payload] failed_post thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:51,864 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:51,922 | INFO     | [job] validate thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:51,971 | INFO     | [data] copytool_out thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:52,198 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:52,224 | INFO     | [payload] control thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:52,561 | INFO     | [job] queue monitor thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:38:54,432 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 18:39:49] 2025-12-16 02:39:21,023 | INFO     | PID=669849 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 18:39:49] 2025-12-16 02:39:21,024 | INFO     | .. there are 33 such processes running
[2025-12-15 18:39:49] 2025-12-16 02:39:21,024 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 18:39:49] 2025-12-16 02:39:21,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 18:39:49] 2025-12-16 02:39:21,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 18:39:49] 2025-12-16 02:39:43,322 | INFO     | [monitor] cgroup control has ended
[2025-12-15 18:39:49] 2025-12-16 02:39:43,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140613479978816)>', '<ExcThread(monitor, started 140612791691008)>']
[2025-12-15 18:39:49] 2025-12-16 02:39:44,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 18:39:49] 2025-12-16 02:39:44,189 | INFO     | [monitor] control thread has ended
[2025-12-15 18:39:49] 2025-12-16 02:39:48,350 | INFO     | all workflow threads have been joined
[2025-12-15 18:39:49] 2025-12-16 02:39:48,350 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 18:39:49] 2025-12-16 02:39:48,350 | INFO     | traces error code: 0
[2025-12-15 18:39:49] 2025-12-16 02:39:48,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 18:39:49] 2025-12-16 02:39:49,060 [wrapper] ==== pilot stdout END ====
[2025-12-15 18:39:49] 2025-12-16 02:39:49,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 18:39:49] 2025-12-16 02:39:49,128 [wrapper] pilotpid: 669849
[2025-12-15 18:39:49] 2025-12-16 02:39:49,171 [wrapper] Pilot exit status: 0
[2025-12-15 18:39:49] 2025-12-16 02:39:49,255 [wrapper] pandaids: 6930225514
[2025-12-15 18:39:49] 2025-12-16 02:39:49,298 [wrapper] cleanup supervisor_pilot  669855 669850
[2025-12-15 18:39:49] 2025-12-16 02:39:49,300 [wrapper] Test setup, not cleaning
[2025-12-15 18:39:49] 2025-12-16 02:39:49,302 [wrapper] apfmon messages muted
[2025-12-15 18:39:49] 2025-12-16 02:39:49,304 [wrapper] ==== wrapper stdout END ====
[2025-12-15 18:39:49] 2025-12-16 02:39:49,306 [wrapper] ==== wrapper stderr END ====
[2025-12-15 18:39:49]  *** Error codes and diagnostics ***
[2025-12-15 18:39:49]     "exeErrorCode": 65,
[2025-12-15 18:39:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-15 18:39:49]     "pilotErrorCode": 1305,
[2025-12-15 18:39:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-15 18:39:49]  *** Listing of results directory ***
[2025-12-15 18:39:49] total 192624
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc    579449 Dec 15 12:57 pilot3.tar.gz
[2025-12-15 18:39:49] -rwx------. 1 boinc boinc     36322 Dec 15 13:01 runpilot2-wrapper.sh
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc      5112 Dec 15 13:03 queuedata.json
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc       100 Dec 15 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 18:39:49] -rwxr-xr-x. 1 boinc boinc      7986 Dec 15 18:33 run_atlas
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc       105 Dec 15 18:33 job.xml
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc      6446 Dec 15 18:33 init_data.xml
[2025-12-15 18:39:49] -rw-r--r--. 2 boinc boinc 193087609 Dec 15 18:33 EVNT.47886829._000406.pool.root.1
[2025-12-15 18:39:49] -rw-r--r--. 2 boinc boinc     15847 Dec 15 18:33 start_atlas.sh
[2025-12-15 18:39:49] drwxrwx--x. 2 boinc boinc      4096 Dec 15 18:33 shared
[2025-12-15 18:39:49] -rw-r--r--. 2 boinc boinc    592415 Dec 15 18:33 input.tar.gz
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc         0 Dec 15 18:33 boinc_lockfile
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc      2539 Dec 15 18:33 pandaJob.out
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc    994523 Dec 15 18:33 agis_schedconf.cvmfs.json
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc   1516240 Dec 15 18:33 agis_ddmendpoints.agis.ALL.json
[2025-12-15 18:39:49] drwx------. 5 boinc boinc      4096 Dec 15 18:33 pilot3
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc       524 Dec 15 18:36 boinc_task_state.xml
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc       983 Dec 15 18:36 memory_monitor_summary.json
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc     22484 Dec 15 18:36 log.47886831._010293.job.log.tgz.1
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc        95 Dec 15 18:38 pilot_heartbeat.json
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc      8386 Dec 15 18:38 heartbeat.json
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc      8192 Dec 15 18:39 boinc_mmap_file
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc        23 Dec 15 18:39 wrapper_checkpoint.txt
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc      4822 Dec 15 18:39 pilotlog.txt
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc     97090 Dec 15 18:39 log.47886831._010293.job.log.1
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc       188 Dec 15 18:39 output.list
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc       620 Dec 15 18:39 runtime_log
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc    143360 Dec 15 18:39 result.tar.gz
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc       644 Dec 15 18:39 ZJhKDmsrUp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkpYKDmIbkW1m.diag
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc      8634 Dec 15 18:39 runtime_log.err
[2025-12-15 18:39:49] -rw-r--r--. 1 boinc boinc     21873 Dec 15 18:39 stderr.txt
[2025-12-15 18:39:49] No HITS result produced
[2025-12-15 18:39:49]  *** Contents of shared directory: ***
[2025-12-15 18:39:49] total 189304
[2025-12-15 18:39:49] -rw-r--r--. 2 boinc boinc 193087609 Dec 15 18:33 ATLAS.root_0
[2025-12-15 18:39:49] -rw-r--r--. 2 boinc boinc     15847 Dec 15 18:33 start_atlas.sh
[2025-12-15 18:39:49] -rw-r--r--. 2 boinc boinc    592415 Dec 15 18:33 input.tar.gz
[2025-12-15 18:39:49] -rw-------. 1 boinc boinc    143360 Dec 15 18:39 result.tar.gz
18:39:50 (662244): run_atlas exited; CPU time 32.909235
18:39:50 (662244): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN