Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:57:31 (740833): wrapper (7.7.26015): starting
18:57:31 (740833): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 18:57:31] Arguments: --nthreads 12
[2025-12-15 18:57:31] Threads: 12
[2025-12-15 18:57:31] Checking for CVMFS
[2025-12-15 18:57:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 18:57:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 18:57:32] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 18:57:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 18:57:32] 2.11.5.0 3590583 56571 396868 154054 3 550 29680597 45568001 12040 130560 0 474601015 99.788 292635405 24314 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-12-15 18:57:32] CVMFS is ok
[2025-12-15 18:57:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 18:57:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 18:57:32] Further information can be found at the LHC@home message board.
[2025-12-15 18:57:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 18:57:32] Checking for apptainer binary...
[2025-12-15 18:57:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 18:57:32] Running /usr/bin/apptainer --version
[2025-12-15 18:57:32] apptainer version 1.4.1-1.el9
[2025-12-15 18:57:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 18:57:32] wns0047.triumf.lcg
[2025-12-15 18:57:32] apptainer works
[2025-12-15 18:57:32] Set ATHENA_PROC_NUMBER=12
[2025-12-15 18:57:32] Set ATHENA_CORE_NUMBER=12
[2025-12-15 18:57:32] Starting ATLAS job with PandaID=6930225108
[2025-12-15 18:57:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 19:02:00]  *** The last 200 lines of the pilot log: ***
[2025-12-15 19:02:00] 2025-12-16 03:01:17,623 | INFO     | will not add max space = 0 B to job metrics
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | WARNING  | wrong length of table data, x=[1765853927.0], y=[933.0] (must be same and length>=4)
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | could have reported an average CPU frequency of 2689 MHz (4 samples)
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | ..............................
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . Timing measurements:
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . get job = 0 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . initial setup = 3 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . payload setup = 11 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . stage-in = 0 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . payload execution = 39 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . stage-out = 1 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . log creation = 0 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | ..............................
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 19:02:00] 2025-12-16 03:01:17,625 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930225108/pilotlog.txt
[2025-12-15 19:02:00] 2025-12-16 03:01:17,657 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-15 19:02:00] - Log from pilotlog.txt -
[2025-12-15 19:02:00] 2025-12-16 03:01:17,622 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 19:02:00] 2025-12-16 03:01:17,622 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 19:02:00] 2025-12-16 03:01:17,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 19:02:00] 2025-12-16 03:01:17,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 19:02:00] 2025-12-16 03:01:17,623 | WARNING  | found no stored workdir sizes
[2025-12-15 19:02:00] 2025-12-16 03:01:17,623 | INFO     | will not add max space = 0 B to job metrics
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | WARNING  | wrong length of table data, x=[1765853927.0], y=[933.0] (must be same and length>=4)
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | could have reported an average CPU frequency of 2689 MHz (4 samples)
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | ..............................
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . Timing measurements:
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . get job = 0 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . initial setup = 3 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . payload setup = 11 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . stage-in = 0 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . payload execution = 39 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . stage-out = 1 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . log creation = 0 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | ..............................
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 19:02:00] 2025-12-16 03:01:17,625 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930225108/pilotlog.txt
[2025-12-15 19:02:00] 2025-12-16 03:01:17,657 | WARNING  | 
[2025-12-15 19:02:00] [begin log extracts]
[2025-12-15 19:02:00] - Log from pilotlog.txt -
[2025-12-15 19:02:00] 2025-12-16 03:01:17,622 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 19:02:00] 2025-12-16 03:01:17,622 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 19:02:00] 2025-12-16 03:01:17,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 19:02:00] 2025-12-16 03:01:17,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 19:02:00] 2025-12-16 03:01:17,623 | WARNING  | found no stored workdir sizes
[2025-12-15 19:02:00] 2025-12-16 03:01:17,623 | INFO     | will not add max space = 0 B to job metrics
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | WARNING  | wrong length of table data, x=[1765853927.0], y=[933.0] (must be same and length>=4)
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | could have reported an average CPU frequency of 2689 MHz (4 samples)
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | ..............................
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . Timing measurements:
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . get job = 0 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . initial setup = 3 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . payload setup = 11 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . stage-in = 0 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . payload execution = 39 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . stage-out = 1 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | . log creation = 0 s
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | ..............................
[2025-12-15 19:02:00] 2025-12-16 03:01:17,624 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 19:02:00] 2025-12-16 03:01:17,625 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930225108/pilotlog.txt
[2025-12-15 19:02:00] [end log extracts]
[2025-12-15 19:02:00] 2025-12-16 03:01:17,657 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-15 19:02:00] 2025-12-16 03:01:17,658 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-15 19:02:00] 2025-12-16 03:01:17,873 | INFO     | PID=744508 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 19:02:00] 2025-12-16 03:01:17,873 | INFO     | .. there are 27 such processes running
[2025-12-15 19:02:00] 2025-12-16 03:01:18,187 | INFO     | 
[2025-12-15 19:02:00] 2025-12-16 03:01:18,187 | INFO     | job summary report
[2025-12-15 19:02:00] 2025-12-16 03:01:18,187 | INFO     | --------------------------------------------------
[2025-12-15 19:02:00] 2025-12-16 03:01:18,187 | INFO     | PanDA job id: 6930225108
[2025-12-15 19:02:00] 2025-12-16 03:01:18,187 | INFO     | task id: 47886831
[2025-12-15 19:02:00] 2025-12-16 03:01:18,187 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-15 18:58:58,937 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-15 19:02:00] 2025-12-16 03:01:18,187 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 19:02:00] 2025-12-16 03:01:18,187 | INFO     | pilot state: failed 
[2025-12-15 19:02:00] 2025-12-16 03:01:18,187 | INFO     | transexitcode: 65
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | exeerrorcode: 65
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | exitcode: 65
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | cpuconsumptiontime: 16 s
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | nevents: 0
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | neventsw: 0
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | pid: 751106
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | pgrp: 751106
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | corecount: 12
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | event service: False
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | sizes: {0: 2283987, 1: 2283987, 11: 2284305, 55: 2307468, 56: 2311760, 60: 2311788, 186: 2312082}
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | --------------------------------------------------
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | 
[2025-12-15 19:02:00] 2025-12-16 03:01:18,188 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-15 19:02:00] 2025-12-16 03:01:18,230 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 19:02:00] 2025-12-16 03:01:18,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,232 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 19:02:00] 2025-12-16 03:01:18,232 | INFO     | job 6930225108 has completed (purged errors)
[2025-12-15 19:02:00] 2025-12-16 03:01:18,232 | INFO     | overall cleanup function is called
[2025-12-15 19:02:00] 2025-12-16 03:01:19,239 | INFO     | --- collectZombieJob: --- 10, [751106]
[2025-12-15 19:02:00] 2025-12-16 03:01:19,239 | INFO     | zombie collector waiting for pid 751106
[2025-12-15 19:02:00] 2025-12-16 03:01:19,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 19:02:00] 2025-12-16 03:01:19,239 | INFO     | collected zombie processes
[2025-12-15 19:02:00] 2025-12-16 03:01:19,239 | INFO     | will attempt to kill all subprocesses of pid=751106
[2025-12-15 19:02:00] 2025-12-16 03:01:19,416 | INFO     | process IDs to be killed: [751106] (in reverse order)
[2025-12-15 19:02:00] 2025-12-16 03:01:19,484 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 19:02:00] 2025-12-16 03:01:19,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 19:02:00] 2025-12-16 03:01:19,492 | INFO     | did not find any defunct processes belonging to 751106
[2025-12-15 19:02:00] 2025-12-16 03:01:19,498 | INFO     | did not find any defunct processes belonging to 751106
[2025-12-15 19:02:00] 2025-12-16 03:01:19,498 | INFO     | ready for new job
[2025-12-15 19:02:00] 2025-12-16 03:01:19,498 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 19:02:00] 2025-12-16 03:01:19,500 | INFO     | ***************************************
[2025-12-15 19:02:00] 2025-12-16 03:01:19,500 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 19:02:00] 2025-12-16 03:01:19,500 | INFO     | ***************************************
[2025-12-15 19:02:00] 2025-12-16 03:01:19,500 | INFO     | 
[2025-12-15 19:02:00] 2025-12-16 03:01:19,502 | INFO     | architecture information:
[2025-12-15 19:02:00] 2025-12-16 03:01:19,502 | INFO     | executing command: cat /etc/os-release
[2025-12-15 19:02:00] 2025-12-16 03:01:19,513 | INFO     | cat /etc/os-release:
[2025-12-15 19:02:00] NAME="CentOS Linux"
[2025-12-15 19:02:00] VERSION="7 (Core)"
[2025-12-15 19:02:00] ID="centos"
[2025-12-15 19:02:00] ID_LIKE="rhel fedora"
[2025-12-15 19:02:00] VERSION_ID="7"
[2025-12-15 19:02:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 19:02:00] ANSI_COLOR="0;31"
[2025-12-15 19:02:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 19:02:00] HOME_URL="https://www.centos.org/"
[2025-12-15 19:02:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 19:02:00] 
[2025-12-15 19:02:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 19:02:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 19:02:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 19:02:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 19:02:00] 
[2025-12-15 19:02:00] 2025-12-16 03:01:19,514 | INFO     | ***************************************
[2025-12-15 19:02:00] 2025-12-16 03:01:20,017 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-15 19:02:00] 2025-12-16 03:01:20,095 | INFO     | sufficient remaining disk space (2147150200832 B)
[2025-12-15 19:02:00] 2025-12-16 03:01:20,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 19:02:00] 2025-12-16 03:01:20,096 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 19:02:00] 2025-12-16 03:01:20,096 | INFO     | update_server=False
[2025-12-15 19:02:00] 2025-12-16 03:01:20,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 19:02:00] 2025-12-16 03:01:20,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 19:02:00] 2025-12-16 03:01:20,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 19:02:00] 2025-12-16 03:01:20,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 19:02:00] 2025-12-16 03:01:20,167 | INFO     | aborting loop
[2025-12-15 19:02:00] 2025-12-16 03:01:20,909 | INFO     | all job control threads have been joined
[2025-12-15 19:02:00] 2025-12-16 03:01:20,945 | INFO     | all payload control threads have been joined
[2025-12-15 19:02:00] 2025-12-16 03:01:21,102 | INFO     | [job] retrieve thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:21,173 | INFO     | [job] job monitor thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:21,177 | INFO     | all data control threads have been joined
[2025-12-15 19:02:00] 2025-12-16 03:01:21,186 | INFO     | [payload] validate_post thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:21,209 | INFO     | [data] copytool_in thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:21,249 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:21,297 | INFO     | [payload] failed_post thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:21,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:21,768 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:21,915 | INFO     | [job] control thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:21,953 | INFO     | [payload] control thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:22,104 | INFO     | [data] copytool_out thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:22,121 | INFO     | [job] validate thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:22,192 | INFO     | [data] control thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:22,447 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:22,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 19:02:00] 2025-12-16 03:01:23,795 | INFO     | [job] queue monitor thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:24,106 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 19:02:00] 2025-12-16 03:01:50,323 | INFO     | PID=744508 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 19:02:00] 2025-12-16 03:01:50,324 | INFO     | .. there are 27 such processes running
[2025-12-15 19:02:00] 2025-12-16 03:01:50,324 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 19:02:00] 2025-12-16 03:01:50,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 19:02:00] 2025-12-16 03:01:50,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 19:02:00] 2025-12-16 03:01:52,834 | INFO     | [monitor] cgroup control has ended
[2025-12-15 19:02:00] 2025-12-16 03:01:54,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857557731136)>', '<ExcThread(monitor, started 139856885839616)>']
[2025-12-15 19:02:00] 2025-12-16 03:01:54,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 19:02:00] 2025-12-16 03:01:54,347 | INFO     | [monitor] control thread has ended
[2025-12-15 19:02:00] 2025-12-16 03:01:59,337 | INFO     | all workflow threads have been joined
[2025-12-15 19:02:00] 2025-12-16 03:01:59,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 19:02:00] 2025-12-16 03:01:59,337 | INFO     | traces error code: 0
[2025-12-15 19:02:00] 2025-12-16 03:01:59,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 19:02:00] 2025-12-16 03:01:59,479 [wrapper] ==== pilot stdout END ====
[2025-12-15 19:02:00] 2025-12-16 03:01:59,481 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 19:02:00] 2025-12-16 03:01:59,482 [wrapper] pilotpid: 744508
[2025-12-15 19:02:00] 2025-12-16 03:01:59,484 [wrapper] Pilot exit status: 0
[2025-12-15 19:02:00] 2025-12-16 03:01:59,492 [wrapper] pandaids: 6930225108
[2025-12-15 19:02:00] 2025-12-16 03:01:59,658 [wrapper] cleanup supervisor_pilot  744514 744509
[2025-12-15 19:02:00] 2025-12-16 03:01:59,678 [wrapper] Test setup, not cleaning
[2025-12-15 19:02:00] 2025-12-16 03:01:59,710 [wrapper] apfmon messages muted
[2025-12-15 19:02:00] 2025-12-16 03:01:59,738 [wrapper] ==== wrapper stdout END ====
[2025-12-15 19:02:00] 2025-12-16 03:01:59,765 [wrapper] ==== wrapper stderr END ====
[2025-12-15 19:02:00]  *** Error codes and diagnostics ***
[2025-12-15 19:02:00]     "exeErrorCode": 65,
[2025-12-15 19:02:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-15 19:02:00]     "pilotErrorCode": 1305,
[2025-12-15 19:02:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-15 19:02:00]  *** Listing of results directory ***
[2025-12-15 19:02:00] total 191988
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc    579449 Dec 15 12:57 pilot3.tar.gz
[2025-12-15 19:02:00] -rwx------. 1 boinc boinc     36322 Dec 15 13:00 runpilot2-wrapper.sh
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc      5112 Dec 15 13:03 queuedata.json
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc       100 Dec 15 18:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 19:02:00] -rwxr-xr-x. 1 boinc boinc      7986 Dec 15 18:57 run_atlas
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc       105 Dec 15 18:57 job.xml
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc      6596 Dec 15 18:57 init_data.xml
[2025-12-15 19:02:00] -rw-r--r--. 2 boinc boinc 192465036 Dec 15 18:57 EVNT.47886829._000391.pool.root.1
[2025-12-15 19:02:00] -rw-r--r--. 2 boinc boinc     15847 Dec 15 18:57 start_atlas.sh
[2025-12-15 19:02:00] drwxrwx--x. 2 boinc boinc      4096 Dec 15 18:57 shared
[2025-12-15 19:02:00] -rw-r--r--. 2 boinc boinc    592406 Dec 15 18:57 input.tar.gz
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc         0 Dec 15 18:57 boinc_lockfile
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc      2538 Dec 15 18:57 pandaJob.out
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc    994523 Dec 15 18:57 agis_schedconf.cvmfs.json
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc   1516240 Dec 15 18:57 agis_ddmendpoints.agis.ALL.json
[2025-12-15 19:02:00] drwx------. 5 boinc boinc      4096 Dec 15 18:57 pilot3
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc       956 Dec 15 18:59 memory_monitor_summary.json
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc     21165 Dec 15 18:59 log.47886831._009914.job.log.tgz.1
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc        95 Dec 15 19:00 pilot_heartbeat.json
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc      8373 Dec 15 19:01 heartbeat.json
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc       524 Dec 15 19:01 boinc_task_state.xml
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc      4822 Dec 15 19:01 pilotlog.txt
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc     86552 Dec 15 19:01 log.47886831._009914.job.log.1
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc      8192 Dec 15 19:02 boinc_mmap_file
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc       188 Dec 15 19:02 output.list
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc       620 Dec 15 19:02 runtime_log
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc    122880 Dec 15 19:02 result.tar.gz
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc       644 Dec 15 19:02 UtrLDmirUp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjoYKDmwTY7Ro.diag
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc      8636 Dec 15 19:02 runtime_log.err
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc        22 Dec 15 19:02 wrapper_checkpoint.txt
[2025-12-15 19:02:00] -rw-r--r--. 1 boinc boinc     21756 Dec 15 19:02 stderr.txt
[2025-12-15 19:02:00] No HITS result produced
[2025-12-15 19:02:00]  *** Contents of shared directory: ***
[2025-12-15 19:02:00] total 188676
[2025-12-15 19:02:00] -rw-r--r--. 2 boinc boinc 192465036 Dec 15 18:57 ATLAS.root_0
[2025-12-15 19:02:00] -rw-r--r--. 2 boinc boinc     15847 Dec 15 18:57 start_atlas.sh
[2025-12-15 19:02:00] -rw-r--r--. 2 boinc boinc    592406 Dec 15 18:57 input.tar.gz
[2025-12-15 19:02:00] -rw-------. 1 boinc boinc    122880 Dec 15 19:02 result.tar.gz
19:02:02 (740833): run_atlas exited; CPU time 24.861690
19:02:02 (740833): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN