Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:00 (131232): wrapper (7.7.26015): starting
00:04:00 (131232): wrapper: running run_atlas (--nthreads 9)
[2025-12-16 00:04:00] Arguments: --nthreads 9
[2025-12-16 00:04:00] Threads: 9
[2025-12-16 00:04:00] Checking for CVMFS
[2025-12-16 00:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 00:04:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 00:04:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 00:04:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 00:04:02] 2.13.3.0 5641 19066 201776 154058 2 216 30639968 32935936 14544 16776704 0 47799125 99.211 91412507 36252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 00:04:02] CVMFS is ok
[2025-12-16 00:04:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 00:04:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 00:04:02] Further information can be found at the LHC@home message board.
[2025-12-16 00:04:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 00:04:02] Checking for apptainer binary...
[2025-12-16 00:04:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 00:04:02] Running /usr/bin/apptainer --version
[2025-12-16 00:04:02] apptainer version 1.4.5-2.el9
[2025-12-16 00:04:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 00:04:03] c6-1-26-1.aglt2.org
[2025-12-16 00:04:03] apptainer works
[2025-12-16 00:04:03] Set ATHENA_PROC_NUMBER=9
[2025-12-16 00:04:03] Set ATHENA_CORE_NUMBER=9
[2025-12-16 00:04:03] Starting ATLAS job with PandaID=6929962860
[2025-12-16 00:04:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 09:06:37]  *** The last 200 lines of the pilot log: ***
[2025-12-16 09:06:37] 2025-12-16 14:05:23,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 09:06:37] 2025-12-16 14:05:24,728 | INFO     | time since job start (32399s) is within the limit (174528.0s)
[2025-12-16 09:06:37] 2025-12-16 14:05:25,296 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 09:06:37] 2025-12-16 14:05:25,311 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2936.045589285714
[2025-12-16 09:06:37] 2025-12-16 14:05:25,365 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929962860/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 09:06:37] 2025-12-16 14:05:25,366 | INFO     | extracted standard info from prmon json
[2025-12-16 09:06:37] 2025-12-16 14:05:25,366 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 09:06:37] 2025-12-16 14:05:25,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 09:06:37] 2025-12-16 14:05:25,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 09:06:37] 2025-12-16 14:05:25,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 09:06:37] 2025-12-16 14:05:25,408 | INFO     | fitting pss+swap vs Time
[2025-12-16 09:06:37] 2025-12-16 14:05:25,413 | INFO     | sum of square deviations: 45643630129.179855
[2025-12-16 09:06:37] 2025-12-16 14:05:25,423 | INFO     | sum of deviations: 283355809406.20856
[2025-12-16 09:06:37] 2025-12-16 14:05:25,424 | INFO     | mean x: 1765877767.8503788
[2025-12-16 09:06:37] 2025-12-16 14:05:25,424 | INFO     | mean y: 2478969.4583333335
[2025-12-16 09:06:37] 2025-12-16 14:05:25,424 | INFO     | intersect: -10960096154.508121
[2025-12-16 09:06:37] 2025-12-16 14:05:25,425 | INFO     | chi2: 6.174099790384777
[2025-12-16 09:06:37] 2025-12-16 14:05:25,462 | INFO     | sum of square deviations: 44359202599.26576
[2025-12-16 09:06:37] 2025-12-16 14:05:25,486 | INFO     | sum of deviations: 353341363978.32825
[2025-12-16 09:06:37] 2025-12-16 14:05:25,486 | INFO     | mean x: 1765877615.3518164
[2025-12-16 09:06:37] 2025-12-16 14:05:25,486 | INFO     | mean y: 2487228.759082218
[2025-12-16 09:06:37] 2025-12-16 14:05:25,486 | INFO     | intersect: -14063536700.118671
[2025-12-16 09:06:37] 2025-12-16 14:05:25,487 | INFO     | chi2: 4.5238926086141475
[2025-12-16 09:06:37] 2025-12-16 14:05:25,487 | INFO     | current chi2=4.5238926086141475 (change=26.727899415240692 %)
[2025-12-16 09:06:37] 2025-12-16 14:05:25,506 | INFO     | sum of square deviations: 43099037178.254944
[2025-12-16 09:06:37] 2025-12-16 14:05:25,525 | INFO     | sum of deviations: 348553825620.4595
[2025-12-16 09:06:37] 2025-12-16 14:05:25,525 | INFO     | mean x: 1765877462.8494208
[2025-12-16 09:06:37] 2025-12-16 14:05:25,525 | INFO     | mean y: 2486649.364864865
[2025-12-16 09:06:37] 2025-12-16 14:05:25,525 | INFO     | intersect: -14278652456.073448
[2025-12-16 09:06:37] 2025-12-16 14:05:25,526 | INFO     | chi2: 4.524327547498936
[2025-12-16 09:06:37] 2025-12-16 14:05:25,526 | INFO     | current chi2=4.524327547498936 (change=-0.00961426192922136 %)
[2025-12-16 09:06:37] 2025-12-16 14:05:25,526 | INFO     | right removable region: 517
[2025-12-16 09:06:37] 2025-12-16 14:05:25,527 | INFO     | sum of square deviations: 44359185882.967476
[2025-12-16 09:06:37] 2025-12-16 14:05:25,561 | INFO     | sum of deviations: 115792118311.68837
[2025-12-16 09:06:37] 2025-12-16 14:05:25,561 | INFO     | mean x: 1765877920.3499043
[2025-12-16 09:06:37] 2025-12-16 14:05:25,561 | INFO     | mean y: 2498849.7667304017
[2025-12-16 09:06:37] 2025-12-16 14:05:25,561 | INFO     | intersect: -4607025446.207019
[2025-12-16 09:06:37] 2025-12-16 14:05:25,562 | INFO     | chi2: 2.518976601854313
[2025-12-16 09:06:37] 2025-12-16 14:05:25,562 | INFO     | current chi2=2.518976601854313 (change=59.20090883893331 %)
[2025-12-16 09:06:37] 2025-12-16 14:05:25,563 | INFO     | sum of square deviations: 43099004114.849365
[2025-12-16 09:06:37] 2025-12-16 14:05:25,603 | INFO     | sum of deviations: 53650182697.98444
[2025-12-16 09:06:37] 2025-12-16 14:05:25,604 | INFO     | mean x: 1765878072.8532817
[2025-12-16 09:06:37] 2025-12-16 14:05:25,604 | INFO     | mean y: 2506356.920849421
[2025-12-16 09:06:37] 2025-12-16 14:05:25,604 | INFO     | intersect: -2195680890.712132
[2025-12-16 09:06:37] 2025-12-16 14:05:25,605 | INFO     | chi2: 1.9899726698433111
[2025-12-16 09:06:37] 2025-12-16 14:05:25,605 | INFO     | current chi2=1.9899726698433111 (change=21.000748145956667 %)
[2025-12-16 09:06:37] 2025-12-16 14:05:25,605 | INFO     | left removable region: 20
[2025-12-16 09:06:37] 2025-12-16 14:05:25,606 | INFO     | sum of square deviations: 38066817983.380585
[2025-12-16 09:06:37] 2025-12-16 14:05:25,634 | INFO     | sum of deviations: 63745441943.22536
[2025-12-16 09:06:37] 2025-12-16 14:05:25,634 | INFO     | mean x: 1765878042.3521128
[2025-12-16 09:06:37] 2025-12-16 14:05:25,635 | INFO     | mean y: 2522160.4044265593
[2025-12-16 09:06:37] 2025-12-16 14:05:25,635 | INFO     | intersect: -2954559155.841077
[2025-12-16 09:06:37] 2025-12-16 14:05:25,635 | INFO     | chi2: 0.09472581293965922
[2025-12-16 09:06:37] 2025-12-16 14:05:25,636 | INFO     | current memory leak: 1.67 B/s (using 497 data points, chi2=0.09)
[2025-12-16 09:06:37] 2025-12-16 14:05:25,637 | INFO     | could have reported an average CPU frequency of 2811 MHz (21 samples)
[2025-12-16 09:06:37] 2025-12-16 14:05:25,637 | INFO     | ..............................
[2025-12-16 09:06:37] 2025-12-16 14:05:25,637 | INFO     | . Timing measurements:
[2025-12-16 09:06:37] 2025-12-16 14:05:25,637 | INFO     | . get job = 0 s
[2025-12-16 09:06:37] 2025-12-16 14:05:25,637 | INFO     | . initial setup = 9 s
[2025-12-16 09:06:37] 2025-12-16 14:05:25,637 | INFO     | . payload setup = 53 s
[2025-12-16 09:06:37] 2025-12-16 14:05:25,637 | INFO     | . stage-in = 0 s
[2025-12-16 09:06:37] 2025-12-16 14:05:25,638 | INFO     | . payload execution = 32207 s
[2025-12-16 09:06:37] 2025-12-16 14:05:25,638 | INFO     | . stage-out = 7 s
[2025-12-16 09:06:37] 2025-12-16 14:05:25,638 | INFO     | . log creation = 1 s
[2025-12-16 09:06:37] 2025-12-16 14:05:25,638 | INFO     | ..............................
[2025-12-16 09:06:37] 2025-12-16 14:05:25,994 | INFO     | 
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | job summary report
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | --------------------------------------------------
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | PanDA job id: 6929962860
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | task id: 47886831
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | errors: (none)
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | pilot state: finished 
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | transexitcode: 0
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | exeerrorcode: 0
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | exeerrordiag: 
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | exitcode: 0
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | exitmsg: OK
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | cpuconsumptiontime: 42654 s
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | nevents: 400
[2025-12-16 09:06:37] 2025-12-16 14:05:25,996 | INFO     | neventsw: 0
[2025-12-16 09:06:37] 2025-12-16 14:05:25,997 | INFO     | pid: 171579
[2025-12-16 09:06:37] 2025-12-16 14:05:25,997 | INFO     | pgrp: 171579
[2025-12-16 09:06:37] 2025-12-16 14:05:25,997 | INFO     | corecount: 9
[2025-12-16 09:06:37] 2025-12-16 14:05:25,997 | INFO     | event service: False
[2025-12-16 09:06:37] 2025-12-16 14:05:25,997 | INFO     | sizes: {0: 2283162, 1: 2283847, 2: 2284046, 3: 2284074, 14: 2284074, 25: 2284102, 36: 2284258, 40: 2284548, 48: 2284576, 32266: 2323168, 32274: 2332166, 32276: 233
[2025-12-16 09:06:37] 2025-12-16 14:05:25,997 | INFO     | --------------------------------------------------
[2025-12-16 09:06:37] 2025-12-16 14:05:25,997 | INFO     | 
[2025-12-16 09:06:37] 2025-12-16 14:05:25,997 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-16 09:06:37] 2025-12-16 14:05:26,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 09:06:37] 2025-12-16 14:05:26,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 09:06:37] 2025-12-16 14:05:26,043 | INFO     | job 6929962860 has completed (purged errors)
[2025-12-16 09:06:37] 2025-12-16 14:05:26,043 | INFO     | overall cleanup function is called
[2025-12-16 09:06:37] 2025-12-16 14:05:27,056 | INFO     | --- collectZombieJob: --- 10, [171579]
[2025-12-16 09:06:37] 2025-12-16 14:05:27,056 | INFO     | zombie collector waiting for pid 171579
[2025-12-16 09:06:37] 2025-12-16 14:05:27,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 09:06:37] 2025-12-16 14:05:27,056 | INFO     | collected zombie processes
[2025-12-16 09:06:37] 2025-12-16 14:05:27,056 | INFO     | will attempt to kill all subprocesses of pid=171579
[2025-12-16 09:06:37] 2025-12-16 14:05:28,243 | INFO     | process IDs to be killed: [171579] (in reverse order)
[2025-12-16 09:06:37] 2025-12-16 14:05:28,370 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 09:06:37] 2025-12-16 14:05:28,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 09:06:37] 2025-12-16 14:05:28,396 | INFO     | did not find any defunct processes belonging to 171579
[2025-12-16 09:06:37] 2025-12-16 14:05:28,419 | INFO     | did not find any defunct processes belonging to 171579
[2025-12-16 09:06:37] 2025-12-16 14:05:28,419 | INFO     | ready for new job
[2025-12-16 09:06:37] 2025-12-16 14:05:28,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 09:06:37] 2025-12-16 14:05:28,427 | INFO     | ***************************************
[2025-12-16 09:06:37] 2025-12-16 14:05:28,427 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 09:06:37] 2025-12-16 14:05:28,427 | INFO     | ***************************************
[2025-12-16 09:06:37] 2025-12-16 14:05:28,427 | INFO     | 
[2025-12-16 09:06:37] 2025-12-16 14:05:28,434 | INFO     | architecture information:
[2025-12-16 09:06:37] 2025-12-16 14:05:28,434 | INFO     | executing command: cat /etc/os-release
[2025-12-16 09:06:37] 2025-12-16 14:05:28,486 | INFO     | cat /etc/os-release:
[2025-12-16 09:06:37] NAME="CentOS Linux"
[2025-12-16 09:06:37] VERSION="7 (Core)"
[2025-12-16 09:06:37] ID="centos"
[2025-12-16 09:06:37] ID_LIKE="rhel fedora"
[2025-12-16 09:06:37] VERSION_ID="7"
[2025-12-16 09:06:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 09:06:37] ANSI_COLOR="0;31"
[2025-12-16 09:06:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 09:06:37] HOME_URL="https://www.centos.org/"
[2025-12-16 09:06:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 09:06:37] 
[2025-12-16 09:06:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 09:06:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 09:06:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 09:06:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 09:06:37] 
[2025-12-16 09:06:37] 2025-12-16 14:05:28,487 | INFO     | ***************************************
[2025-12-16 09:06:37] 2025-12-16 14:05:28,990 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-16 09:06:37] 2025-12-16 14:05:29,068 | INFO     | sufficient remaining disk space (75420925952 B)
[2025-12-16 09:06:37] 2025-12-16 14:05:29,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 09:06:37] 2025-12-16 14:05:29,069 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 09:06:37] 2025-12-16 14:05:29,069 | INFO     | update_server=False
[2025-12-16 09:06:37] 2025-12-16 14:05:29,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 09:06:37] 2025-12-16 14:05:29,069 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 09:06:37] 2025-12-16 14:05:29,303 | INFO     | all data control threads have been joined
[2025-12-16 09:06:37] 2025-12-16 14:05:29,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:06:37] 2025-12-16 14:05:29,343 | INFO     | aborting loop
[2025-12-16 09:06:37] 2025-12-16 14:05:29,557 | INFO     | all job control threads have been joined
[2025-12-16 09:06:37] 2025-12-16 14:05:29,726 | INFO     | all payload control threads have been joined
[2025-12-16 09:06:37] 2025-12-16 14:05:30,104 | INFO     | [job] retrieve thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:30,242 | INFO     | [data] copytool_in thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:30,268 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:30,309 | INFO     | [data] control thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:30,349 | INFO     | [job] validate thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:30,350 | INFO     | [job] job monitor thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:30,520 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:30,563 | INFO     | [job] control thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:30,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 09:06:37] 2025-12-16 14:05:30,760 | INFO     | [payload] control thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:31,039 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:31,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:06:37] 2025-12-16 14:05:31,109 | INFO     | [data] copytool_out thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:31,354 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:31,450 | INFO     | [payload] validate_post thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:31,451 | INFO     | [payload] failed_post thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:32,089 | INFO     | [job] queue monitor thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:05:34,810 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 09:06:37] 2025-12-16 14:06:00,445 | INFO     | PID=140196 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 09:06:37] 2025-12-16 14:06:00,445 | INFO     | .. there are 17 such processes running
[2025-12-16 09:06:37] 2025-12-16 14:06:00,446 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 09:06:37] 2025-12-16 14:06:00,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 09:06:37] 2025-12-16 14:06:00,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 09:06:37] 2025-12-16 14:06:27,437 | INFO     | [monitor] cgroup control has ended
[2025-12-16 09:06:37] 2025-12-16 14:06:28,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139783750350656)>', '<ExcThread(monitor, started 139782730544896)>']
[2025-12-16 09:06:37] 2025-12-16 14:06:28,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 09:06:37] 2025-12-16 14:06:28,790 | INFO     | [monitor] control thread has ended
[2025-12-16 09:06:37] 2025-12-16 14:06:33,182 | INFO     | all workflow threads have been joined
[2025-12-16 09:06:37] 2025-12-16 14:06:33,182 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 09:06:37] 2025-12-16 14:06:33,183 | INFO     | traces error code: 0
[2025-12-16 09:06:37] 2025-12-16 14:06:33,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 09:06:37] 2025-12-16 14:06:35,892 [wrapper] ==== pilot stdout END ====
[2025-12-16 09:06:37] 2025-12-16 14:06:35,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 09:06:37] 2025-12-16 14:06:35,983 [wrapper] pilotpid: 140196
[2025-12-16 09:06:37] 2025-12-16 14:06:36,036 [wrapper] Pilot exit status: 0
[2025-12-16 09:06:37] 2025-12-16 14:06:36,166 [wrapper] pandaids: 6929962860
[2025-12-16 09:06:37] 2025-12-16 14:06:36,505 [wrapper] cleanup supervisor_pilot 1998766 140197
[2025-12-16 09:06:37] 2025-12-16 14:06:36,522 [wrapper] Test setup, not cleaning
[2025-12-16 09:06:37] 2025-12-16 14:06:36,534 [wrapper] apfmon messages muted
[2025-12-16 09:06:37] 2025-12-16 14:06:36,572 [wrapper] ==== wrapper stdout END ====
[2025-12-16 09:06:37] 2025-12-16 14:06:36,605 [wrapper] ==== wrapper stderr END ====
[2025-12-16 09:06:37]  *** Error codes and diagnostics ***
[2025-12-16 09:06:37]     "exeErrorCode": 0,
[2025-12-16 09:06:37]     "exeErrorDiag": "",
[2025-12-16 09:06:37]     "pilotErrorCode": 0,
[2025-12-16 09:06:37]     "pilotErrorDiag": "",
[2025-12-16 09:06:37]  *** Listing of results directory ***
[2025-12-16 09:06:37] total 333760
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 15:57 pilot3.tar.gz
[2025-12-16 09:06:37] -rwx------. 1 boincer umatlas     36322 Dec 15 16:00 runpilot2-wrapper.sh
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 16:03 queuedata.json
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas       100 Dec 16 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 09:06:37] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 00:04 run_atlas
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas       105 Dec 16 00:04 job.xml
[2025-12-16 09:06:37] -rw-r--r--. 2 boincer umatlas 189408708 Dec 16 00:04 EVNT.47886829._000374.pool.root.1
[2025-12-16 09:06:37] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:04 start_atlas.sh
[2025-12-16 09:06:37] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 00:04 shared
[2025-12-16 09:06:37] -rw-r--r--. 2 boincer umatlas    592419 Dec 16 00:04 input.tar.gz
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas         0 Dec 16 00:04 boinc_lockfile
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas      2538 Dec 16 00:04 pandaJob.out
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas        57 Dec 16 00:04 setup.sh.local
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas    994531 Dec 16 00:05 agis_schedconf.cvmfs.json
[2025-12-16 09:06:37] drwx------. 5 boincer umatlas      4096 Dec 16 00:05 pilot3
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas 139303502 Dec 16 09:02 HITS.47886831._009476.pool.root.1
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas       531 Dec 16 09:02 boinc_task_state.xml
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas      1041 Dec 16 09:04 memory_monitor_summary.json
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas   1516240 Dec 16 09:04 agis_ddmendpoints.agis.ALL.json
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas      6842 Dec 16 09:04 init_data.xml
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas    693128 Dec 16 09:04 log.47886831._009476.job.log.tgz.1
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas      7824 Dec 16 09:05 heartbeat.json
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas        95 Dec 16 09:06 pilot_heartbeat.json
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas      4823 Dec 16 09:06 pilotlog.txt
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 09:06 boinc_mmap_file
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas   3876906 Dec 16 09:06 log.47886831._009476.job.log.1
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas       357 Dec 16 09:06 output.list
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas       620 Dec 16 09:06 runtime_log
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas   4587520 Dec 16 09:06 result.tar.gz
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas        28 Dec 16 09:06 wrapper_checkpoint.txt
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas       658 Dec 16 09:06 TU3NDmgrUp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKMUKDmn9CF2n.diag
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas      9348 Dec 16 09:06 runtime_log.err
[2025-12-16 09:06:37] -rw-r--r--. 1 boincer umatlas     21239 Dec 16 09:06 stderr.txt
[2025-12-16 09:06:37] HITS file was successfully produced:
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas 139303502 Dec 16 09:02 shared/HITS.pool.root.1
[2025-12-16 09:06:37]  *** Contents of shared directory: ***
[2025-12-16 09:06:37] total 326092
[2025-12-16 09:06:37] -rw-r--r--. 2 boincer umatlas 189408708 Dec 16 00:04 ATLAS.root_0
[2025-12-16 09:06:37] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:04 start_atlas.sh
[2025-12-16 09:06:37] -rw-r--r--. 2 boincer umatlas    592419 Dec 16 00:04 input.tar.gz
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas 139303502 Dec 16 09:02 HITS.pool.root.1
[2025-12-16 09:06:37] -rw-------. 1 boincer umatlas   4587520 Dec 16 09:06 result.tar.gz
09:06:39 (131232): run_atlas exited; CPU time 43815.945901
09:06:39 (131232): called boinc_finish(0)

</stderr_txt>
]]>

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