Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:23:03 (6552): wrapper (7.7.26015): starting
20:23:03 (6552): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 20:23:03] Arguments: --nthreads 12
[2025-12-15 20:23:03] Threads: 12
[2025-12-15 20:23:03] Checking for CVMFS
[2025-12-15 20:23:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 20:23:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 20:23:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 20:23:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 20:23:03] 2.11.2.0 2937 315816 96264 154053 2 56 15594603 20275200 1 130560 1 140377474 99.966 18921663 15841 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 20:23:03] CVMFS is ok
[2025-12-15 20:23:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 20:23:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 20:23:03] Further information can be found at the LHC@home message board.
[2025-12-15 20:23:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 20:23:03] Checking for apptainer binary...
[2025-12-15 20:23:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 20:23:03] Running /usr/bin/apptainer --version
[2025-12-15 20:23:03] apptainer version 1.3.2-1.el7
[2025-12-15 20:23:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 20:23:05] c-205-8.aglt2.org
[2025-12-15 20:23:05] apptainer works
[2025-12-15 20:23:05] Set ATHENA_PROC_NUMBER=12
[2025-12-15 20:23:05] Set ATHENA_CORE_NUMBER=12
[2025-12-15 20:23:05] Starting ATLAS job with PandaID=6929807193
[2025-12-15 20:23:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 22:01:40]  *** The last 200 lines of the pilot log: ***
[2025-12-15 22:01:40] 2025-12-16 03:01:11,604 | INFO     | summary of transferred files:
[2025-12-15 22:01:40] 2025-12-16 03:01:11,604 | INFO     |  -- lfn=log.47898826._001752.job.log.tgz.1, status_code=0, status=transferred
[2025-12-15 22:01:40] 2025-12-16 03:01:11,604 | INFO     | stage-out finished correctly
[2025-12-15 22:01:40] 2025-12-16 03:01:11,856 | INFO     | time since job start (5871s) is within the limit (174528.0s)
[2025-12-15 22:01:40] 2025-12-16 03:01:13,607 | WARNING  | process 16611 can no longer be monitored (due to stat problems) - aborting
[2025-12-15 22:01:40] 2025-12-16 03:01:13,607 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929807193/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 22:01:40] 2025-12-16 03:01:13,608 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929807193/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 22:01:40] 2025-12-16 03:01:13,608 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-15 22:01:40] 2025-12-16 03:01:13,609 | WARNING  | maxPSS not found in memory monitor output
[2025-12-15 22:01:40] 2025-12-16 03:01:13,609 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3757739 B
[2025-12-15 22:01:40] 2025-12-16 03:01:13,609 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15685 B
[2025-12-15 22:01:40] 2025-12-16 03:01:13,609 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 22:01:40] 2025-12-16 03:01:13,626 | INFO     | sufficient remaining disk space (29305602048 B)
[2025-12-15 22:01:40] 2025-12-16 03:01:13,627 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-15 22:01:40] 2025-12-16 03:01:13,628 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6929807193: 4064979 B (within 2768240640 B limit)
[2025-12-15 22:01:40] 2025-12-16 03:01:13,628 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6929807193/HITS.47898826._001752.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-15 22:01:40] 2025-12-16 03:01:13,628 | INFO     | total size of present files: 0 B (workdir size: 4064979 B)
[2025-12-15 22:01:40] 2025-12-16 03:01:13,628 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6929807193/HITS.47898826._001752.pool.root.1 since it does not exist
[2025-12-15 22:01:40] 2025-12-16 03:01:13,722 | INFO     | number of running child processes to parent process 16611: 1
[2025-12-15 22:01:40] 2025-12-16 03:01:13,722 | INFO     | maximum number of monitored processes: 6
[2025-12-15 22:01:40] 2025-12-16 03:01:13,860 | INFO     | time since job start (5873s) is within the limit (174528.0s)
[2025-12-15 22:01:40] 2025-12-16 03:01:14,725 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-15 22:01:40] 2025-12-16 03:01:15,068 | INFO     | job 6929807193 has state=finished
[2025-12-15 22:01:40] 2025-12-16 03:01:15,068 | INFO     | preparing for final server update for job 6929807193 in state='finished'
[2025-12-15 22:01:40] 2025-12-16 03:01:15,069 | INFO     | this job has now completed (state=finished)
[2025-12-15 22:01:40] 2025-12-16 03:01:15,069 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-15 22:01:40] 2025-12-16 03:01:15,070 | INFO     | log transfer has been attempted: DONE
[2025-12-15 22:01:40] 2025-12-16 03:01:15,070 | INFO     | job 6929807193 has finished - writing final server update
[2025-12-15 22:01:40] 2025-12-16 03:01:15,070 | INFO     | total number of processed events: 400 (read)
[2025-12-15 22:01:40] 2025-12-16 03:01:15,071 | INFO     | executing command: lscpu
[2025-12-15 22:01:40] 2025-12-16 03:01:15,097 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 22:01:40] 2025-12-16 03:01:15,866 | INFO     | time since job start (5875s) is within the limit (174528.0s)
[2025-12-15 22:01:40] 2025-12-16 03:01:16,225 | INFO     | monitor loop #433: job 0:6929807193 is in state 'finished'
[2025-12-15 22:01:40] 2025-12-16 03:01:16,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 22:01:40] 2025-12-16 03:01:17,871 | INFO     | time since job start (5877s) is within the limit (174528.0s)
[2025-12-15 22:01:40] 2025-12-16 03:01:18,728 | INFO     | monitor loop #434: job 0:6929807193 is in state 'finished'
[2025-12-15 22:01:40] 2025-12-16 03:01:18,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 22:01:40] 2025-12-16 03:01:19,759 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 22:01:40] 2025-12-16 03:01:19,763 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-15 22:01:40] 2025-12-16 03:01:19,766 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929807193/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 22:01:40] 2025-12-16 03:01:19,767 | INFO     | extracted standard info from prmon json
[2025-12-15 22:01:40] 2025-12-16 03:01:19,767 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 22:01:40] 2025-12-16 03:01:19,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 22:01:40] 2025-12-16 03:01:19,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 22:01:40] 2025-12-16 03:01:19,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 22:01:40] 2025-12-16 03:01:19,770 | INFO     | fitting pss+swap vs Time
[2025-12-15 22:01:40] 2025-12-16 03:01:19,770 | INFO     | sum of square deviations: 218571540.0
[2025-12-15 22:01:40] 2025-12-16 03:01:19,771 | INFO     | sum of deviations: -15008855349.0
[2025-12-15 22:01:40] 2025-12-16 03:01:19,771 | INFO     | mean x: 1765851217.0
[2025-12-15 22:01:40] 2025-12-16 03:01:19,771 | INFO     | mean y: 2818107.0786516853
[2025-12-15 22:01:40] 2025-12-16 03:01:19,771 | INFO     | intersect: 121260166999.84213
[2025-12-15 22:01:40] 2025-12-16 03:01:19,771 | INFO     | chi2: 0.08584027369617603
[2025-12-15 22:01:40] 2025-12-16 03:01:19,771 | INFO     | current memory leak: -68.67 B/s (using 89 data points, chi2=0.09)
[2025-12-15 22:01:40] 2025-12-16 03:01:19,772 | INFO     | could have reported an average CPU frequency of 2128 MHz (7 samples)
[2025-12-15 22:01:40] 2025-12-16 03:01:19,772 | INFO     | ..............................
[2025-12-15 22:01:40] 2025-12-16 03:01:19,772 | INFO     | . Timing measurements:
[2025-12-15 22:01:40] 2025-12-16 03:01:19,772 | INFO     | . get job = 0 s
[2025-12-15 22:01:40] 2025-12-16 03:01:19,772 | INFO     | . initial setup = 2 s
[2025-12-15 22:01:40] 2025-12-16 03:01:19,772 | INFO     | . payload setup = 7 s
[2025-12-15 22:01:40] 2025-12-16 03:01:19,772 | INFO     | . stage-in = 0 s
[2025-12-15 22:01:40] 2025-12-16 03:01:19,772 | INFO     | . payload execution = 5844 s
[2025-12-15 22:01:40] 2025-12-16 03:01:19,773 | INFO     | . stage-out = 0 s
[2025-12-15 22:01:40] 2025-12-16 03:01:19,773 | INFO     | . log creation = 0 s
[2025-12-15 22:01:40] 2025-12-16 03:01:19,773 | INFO     | ..............................
[2025-12-15 22:01:40] 2025-12-16 03:01:19,852 | INFO     | 
[2025-12-15 22:01:40] 2025-12-16 03:01:19,852 | INFO     | job summary report
[2025-12-15 22:01:40] 2025-12-16 03:01:19,853 | INFO     | --------------------------------------------------
[2025-12-15 22:01:40] 2025-12-16 03:01:19,853 | INFO     | PanDA job id: 6929807193
[2025-12-15 22:01:40] 2025-12-16 03:01:19,853 | INFO     | task id: 47898826
[2025-12-15 22:01:40] 2025-12-16 03:01:19,853 | INFO     | errors: (none)
[2025-12-15 22:01:40] 2025-12-16 03:01:19,853 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 22:01:40] 2025-12-16 03:01:19,853 | INFO     | pilot state: finished 
[2025-12-15 22:01:40] 2025-12-16 03:01:19,854 | INFO     | transexitcode: 0
[2025-12-15 22:01:40] 2025-12-16 03:01:19,854 | INFO     | exeerrorcode: 0
[2025-12-15 22:01:40] 2025-12-16 03:01:19,854 | INFO     | exeerrordiag: 
[2025-12-15 22:01:40] 2025-12-16 03:01:19,854 | INFO     | exitcode: 0
[2025-12-15 22:01:40] 2025-12-16 03:01:19,854 | INFO     | exitmsg: OK
[2025-12-15 22:01:40] 2025-12-16 03:01:19,854 | INFO     | cpuconsumptiontime: 64763 s
[2025-12-15 22:01:40] 2025-12-16 03:01:19,855 | INFO     | nevents: 400
[2025-12-15 22:01:40] 2025-12-16 03:01:19,855 | INFO     | neventsw: 0
[2025-12-15 22:01:40] 2025-12-16 03:01:19,855 | INFO     | pid: 16611
[2025-12-15 22:01:40] 2025-12-16 03:01:19,855 | INFO     | pgrp: 16611
[2025-12-15 22:01:40] 2025-12-16 03:01:19,855 | INFO     | corecount: 12
[2025-12-15 22:01:40] 2025-12-16 03:01:19,855 | INFO     | event service: False
[2025-12-15 22:01:40] 2025-12-16 03:01:19,856 | INFO     | sizes: {0: 2283787, 1: 2283986, 6: 2284248, 12: 2284276, 5855: 2310938, 5856: 2319936, 5859: 2320148, 5864: 2320342}
[2025-12-15 22:01:40] 2025-12-16 03:01:19,856 | INFO     | --------------------------------------------------
[2025-12-15 22:01:40] 2025-12-16 03:01:19,856 | INFO     | 
[2025-12-15 22:01:40] 2025-12-16 03:01:19,856 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 22:01:40] 2025-12-16 03:01:19,877 | INFO     | time since job start (5879s) is within the limit (174528.0s)
[2025-12-15 22:01:40] 2025-12-16 03:01:19,880 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,883 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 22:01:40] 2025-12-16 03:01:19,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,883 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 22:01:40] 2025-12-16 03:01:19,883 | INFO     | job 6929807193 has completed (purged errors)
[2025-12-15 22:01:40] 2025-12-16 03:01:19,883 | INFO     | overall cleanup function is called
[2025-12-15 22:01:40] 2025-12-16 03:01:20,892 | INFO     | --- collectZombieJob: --- 10, [16611]
[2025-12-15 22:01:40] 2025-12-16 03:01:20,892 | INFO     | zombie collector waiting for pid 16611
[2025-12-15 22:01:40] 2025-12-16 03:01:20,892 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 22:01:40] 2025-12-16 03:01:20,892 | INFO     | collected zombie processes
[2025-12-15 22:01:40] 2025-12-16 03:01:20,893 | INFO     | will attempt to kill all subprocesses of pid=16611
[2025-12-15 22:01:40] 2025-12-16 03:01:20,986 | INFO     | process IDs to be killed: [16611] (in reverse order)
[2025-12-15 22:01:40] 2025-12-16 03:01:21,038 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 22:01:40] 2025-12-16 03:01:21,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 22:01:40] 2025-12-16 03:01:21,041 | INFO     | did not find any defunct processes belonging to 16611
[2025-12-15 22:01:40] 2025-12-16 03:01:21,044 | INFO     | did not find any defunct processes belonging to 16611
[2025-12-15 22:01:40] 2025-12-16 03:01:21,044 | INFO     | ready for new job
[2025-12-15 22:01:40] 2025-12-16 03:01:21,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 22:01:40] 2025-12-16 03:01:21,045 | INFO     | ***************************************
[2025-12-15 22:01:40] 2025-12-16 03:01:21,046 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 22:01:40] 2025-12-16 03:01:21,046 | INFO     | ***************************************
[2025-12-15 22:01:40] 2025-12-16 03:01:21,046 | INFO     | 
[2025-12-15 22:01:40] 2025-12-16 03:01:21,046 | INFO     | architecture information:
[2025-12-15 22:01:40] 2025-12-16 03:01:21,047 | INFO     | executing command: cat /etc/os-release
[2025-12-15 22:01:40] 2025-12-16 03:01:21,061 | INFO     | cat /etc/os-release:
[2025-12-15 22:01:40] NAME="CentOS Linux"
[2025-12-15 22:01:40] VERSION="7 (Core)"
[2025-12-15 22:01:40] ID="centos"
[2025-12-15 22:01:40] ID_LIKE="rhel fedora"
[2025-12-15 22:01:40] VERSION_ID="7"
[2025-12-15 22:01:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 22:01:40] ANSI_COLOR="0;31"
[2025-12-15 22:01:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 22:01:40] HOME_URL="https://www.centos.org/"
[2025-12-15 22:01:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 22:01:40] 
[2025-12-15 22:01:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 22:01:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 22:01:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 22:01:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 22:01:40] 
[2025-12-15 22:01:40] 2025-12-16 03:01:21,061 | INFO     | ***************************************
[2025-12-15 22:01:40] 2025-12-16 03:01:21,564 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 22:01:40] 2025-12-16 03:01:21,582 | INFO     | sufficient remaining disk space (29310844928 B)
[2025-12-15 22:01:40] 2025-12-16 03:01:21,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 22:01:40] 2025-12-16 03:01:21,582 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 22:01:40] 2025-12-16 03:01:21,582 | INFO     | update_server=False
[2025-12-15 22:01:40] 2025-12-16 03:01:21,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 22:01:40] 2025-12-16 03:01:21,583 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-15 22:01:40] 2025-12-16 03:01:21,583 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 22:01:40] 2025-12-16 03:01:21,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 22:01:40] 2025-12-16 03:01:21,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 22:01:40] 2025-12-16 03:01:21,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 22:01:40] 2025-12-16 03:01:21,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 22:01:40] 2025-12-16 03:01:22,200 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 22:01:40] 2025-12-16 03:01:22,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 22:01:40] 2025-12-16 03:01:22,237 | INFO     | aborting loop
[2025-12-15 22:01:40] 2025-12-16 03:01:22,414 | INFO     | all data control threads have been joined
[2025-12-15 22:01:40] 2025-12-16 03:01:22,588 | INFO     | [job] retrieve thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:22,590 | INFO     | [job] queue monitor thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:22,609 | INFO     | all payload control threads have been joined
[2025-12-15 22:01:40] 2025-12-16 03:01:22,614 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:22,621 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:23,028 | INFO     | [payload] validate_post thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:23,195 | INFO     | [data] copytool_in thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:23,237 | INFO     | [job] job monitor thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:23,281 | INFO     | all job control threads have been joined
[2025-12-15 22:01:40] 2025-12-16 03:01:23,416 | INFO     | [data] control thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:23,614 | INFO     | [payload] control thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:23,752 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:23,837 | INFO     | [job] validate thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:23,873 | INFO     | [payload] failed_post thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:24,205 | INFO     | [data] copytool_out thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:24,286 | INFO     | [job] control thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:25,590 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:28,993 | INFO     | [monitor] cgroup control has ended
[2025-12-15 22:01:40] 2025-12-16 03:01:31,857 | INFO     | job.realtimelogging is not enabled
[2025-12-15 22:01:40] 2025-12-16 03:01:32,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 22:01:40] 2025-12-16 03:01:34,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555953215296)>', '<ExcThread(monitor, started 140555220678400)>']
[2025-12-15 22:01:40] 2025-12-16 03:01:35,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 22:01:40] 2025-12-16 03:01:35,653 | INFO     | [monitor] control thread has ended
[2025-12-15 22:01:40] 2025-12-16 03:01:39,886 | INFO     | all workflow threads have been joined
[2025-12-15 22:01:40] 2025-12-16 03:01:39,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 22:01:40] 2025-12-16 03:01:39,892 | INFO     | traces error code: 0
[2025-12-15 22:01:40] 2025-12-16 03:01:39,893 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 22:01:40] 2025-12-16 03:01:39,995 [wrapper] ==== pilot stdout END ====
[2025-12-15 22:01:40] 2025-12-16 03:01:39,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 22:01:40] 2025-12-16 03:01:40,002 [wrapper] pilotpid: 10243
[2025-12-15 22:01:40] 2025-12-16 03:01:40,005 [wrapper] Pilot exit status: 0
[2025-12-15 22:01:40] 2025-12-16 03:01:40,021 [wrapper] pandaids: 6929807193
[2025-12-15 22:01:40] 2025-12-16 03:01:40,059 [wrapper] cleanup supervisor_pilot 17494 10244
[2025-12-15 22:01:40] 2025-12-16 03:01:40,062 [wrapper] Test setup, not cleaning
[2025-12-15 22:01:40] 2025-12-16 03:01:40,066 [wrapper] apfmon messages muted
[2025-12-15 22:01:40] 2025-12-16 03:01:40,070 [wrapper] ==== wrapper stdout END ====
[2025-12-15 22:01:40] 2025-12-16 03:01:40,074 [wrapper] ==== wrapper stderr END ====
[2025-12-15 22:01:40]  *** Error codes and diagnostics ***
[2025-12-15 22:01:40]     "exeErrorCode": 0,
[2025-12-15 22:01:40]     "exeErrorDiag": "",
[2025-12-15 22:01:40]     "pilotErrorCode": 0,
[2025-12-15 22:01:40]     "pilotErrorDiag": "",
[2025-12-15 22:01:40]  *** Listing of results directory ***
[2025-12-15 22:01:40] total 446024
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 10:52 pilot3.tar.gz
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 10:52 queuedata.json
[2025-12-15 22:01:40] -rwx------ 1 boincer umatlas     36322 Dec 15 10:52 runpilot2-wrapper.sh
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas       100 Dec 15 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 22:01:40] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 20:23 run_atlas
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas       105 Dec 15 20:23 job.xml
[2025-12-15 22:01:40] -rw-r--r-- 2 boincer umatlas 225658504 Dec 15 20:23 EVNT.47898824._000069.pool.root.1
[2025-12-15 22:01:40] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 20:23 start_atlas.sh
[2025-12-15 22:01:40] drwxrwx--x 2 boincer umatlas      4096 Dec 15 20:23 shared
[2025-12-15 22:01:40] -rw-r--r-- 2 boincer umatlas    592385 Dec 15 20:23 input.tar.gz
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas         0 Dec 15 20:23 boinc_lockfile
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas      2512 Dec 15 20:23 pandaJob.out
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas        57 Dec 15 20:23 setup.sh.local
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas    994531 Dec 15 20:23 agis_schedconf.cvmfs.json
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas   1516240 Dec 15 20:23 agis_ddmendpoints.agis.ALL.json
[2025-12-15 22:01:40] drwx------ 5 boincer umatlas      4096 Dec 15 20:23 pilot3
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas      5951 Dec 15 21:58 init_data.xml
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas        95 Dec 15 22:00 pilot_heartbeat.json
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas 224696360 Dec 15 22:00 HITS.47898826._001752.pool.root.1
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas       529 Dec 15 22:01 boinc_task_state.xml
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas      1046 Dec 15 22:01 memory_monitor_summary.json
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas    388427 Dec 15 22:01 log.47898826._001752.job.log.tgz.1
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas      7845 Dec 15 22:01 heartbeat.json
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 22:01 boinc_mmap_file
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas        27 Dec 15 22:01 wrapper_checkpoint.txt
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas      4624 Dec 15 22:01 pilotlog.txt
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas    836809 Dec 15 22:01 log.47898826._001752.job.log.1
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas       357 Dec 15 22:01 output.list
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas       620 Dec 15 22:01 runtime_log
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas   1249280 Dec 15 22:01 result.tar.gz
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas      9339 Dec 15 22:01 runtime_log.err
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas       658 Dec 15 22:01 3RXMDmV3Pp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9kTKDmUR5d5n.diag
[2025-12-15 22:01:40] -rw-r--r-- 1 boincer umatlas     22355 Dec 15 22:01 stderr.txt
[2025-12-15 22:01:40] HITS file was successfully produced:
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas 224696360 Dec 15 22:00 shared/HITS.pool.root.1
[2025-12-15 22:01:40]  *** Contents of shared directory: ***
[2025-12-15 22:01:40] total 441624
[2025-12-15 22:01:40] -rw-r--r-- 2 boincer umatlas 225658504 Dec 15 20:23 ATLAS.root_0
[2025-12-15 22:01:40] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 20:23 start_atlas.sh
[2025-12-15 22:01:40] -rw-r--r-- 2 boincer umatlas    592385 Dec 15 20:23 input.tar.gz
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas 224696360 Dec 15 22:00 HITS.pool.root.1
[2025-12-15 22:01:40] -rw------- 1 boincer umatlas   1249280 Dec 15 22:01 result.tar.gz
22:01:41 (6552): run_atlas exited; CPU time 64742.697907
22:01:41 (6552): called boinc_finish(0)

</stderr_txt>
]]>

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