Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:22:15 (845205): wrapper (7.7.26015): starting
20:22:15 (845205): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 20:22:15] Arguments: --nthreads 8
[2025-12-15 20:22:15] Threads: 8
[2025-12-15 20:22:15] Checking for CVMFS
[2025-12-15 20:22:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 20:22:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 20:22:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 20:22:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 20:22:17] 2.13.3.0 10223 58162 116756 154053 2 146 38330156 40960001 40950 16776704 0 717845900 99.706 551915910 49825 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-15 20:22:17] CVMFS is ok
[2025-12-15 20:22:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 20:22:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 20:22:17] Further information can be found at the LHC@home message board.
[2025-12-15 20:22:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 20:22:17] Checking for apptainer binary...
[2025-12-15 20:22:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 20:22:17] Running /usr/bin/apptainer --version
[2025-12-15 20:22:17] apptainer version 1.4.5-2.el9
[2025-12-15 20:22:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 20:22:17] c8-7-6.aglt2.org
[2025-12-15 20:22:17] apptainer works
[2025-12-15 20:22:17] Set ATHENA_PROC_NUMBER=8
[2025-12-15 20:22:17] Set ATHENA_CORE_NUMBER=8
[2025-12-15 20:22:18] Starting ATLAS job with PandaID=6931593364
[2025-12-15 20:22:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 21:33:38]  *** The last 200 lines of the pilot log: ***
[2025-12-15 21:33:38] 2025-12-16 02:32:14,146 | INFO     | preparing for final server update for job 6931593364 in state='finished'
[2025-12-15 21:33:38] 2025-12-16 02:32:14,146 | INFO     | this job has now completed (state=finished)
[2025-12-15 21:33:38] 2025-12-16 02:32:14,147 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-15 21:33:38] 2025-12-16 02:32:14,147 | INFO     | log transfer has been attempted: DONE
[2025-12-15 21:33:38] 2025-12-16 02:32:14,147 | INFO     | job 6931593364 has finished - writing final server update
[2025-12-15 21:33:38] 2025-12-16 02:32:14,147 | INFO     | total number of processed events: 400 (read)
[2025-12-15 21:33:38] 2025-12-16 02:32:14,149 | INFO     | executing command: lscpu
[2025-12-15 21:33:38] 2025-12-16 02:32:14,201 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 21:33:38] 2025-12-16 02:32:15,679 | INFO     | monitor loop #285: job 0:6931593364 is in state 'finished'
[2025-12-15 21:33:38] 2025-12-16 02:32:15,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 21:33:38] 2025-12-16 02:32:15,814 | INFO     | time since job start (4131s) is within the limit (174528.0s)
[2025-12-15 21:33:38] 2025-12-16 02:32:17,820 | INFO     | time since job start (4133s) is within the limit (174528.0s)
[2025-12-15 21:33:38] 2025-12-16 02:32:18,190 | INFO     | monitor loop #286: job 0:6931593364 is in state 'finished'
[2025-12-15 21:33:38] 2025-12-16 02:32:18,190 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 21:33:38] 2025-12-16 02:32:19,576 | INFO     | PID=865427 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 21:33:38] 2025-12-16 02:32:19,576 | INFO     | .. there are 48 such processes running
[2025-12-15 21:33:38] 2025-12-16 02:32:20,577 | INFO     | time since job start (4136s) is within the limit (174528.0s)
[2025-12-15 21:33:38] 2025-12-16 02:32:20,705 | INFO     | monitor loop #287: job 0:6931593364 is in state 'finished'
[2025-12-15 21:33:38] 2025-12-16 02:32:20,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 21:33:38] 2025-12-16 02:32:22,588 | INFO     | time since job start (4138s) is within the limit (174528.0s)
[2025-12-15 21:33:38] 2025-12-16 02:32:23,211 | INFO     | monitor loop #288: job 0:6931593364 is in state 'finished'
[2025-12-15 21:33:38] 2025-12-16 02:32:23,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 21:33:38] 2025-12-16 02:32:24,595 | INFO     | time since job start (4140s) is within the limit (174528.0s)
[2025-12-15 21:33:38] 2025-12-16 02:32:25,716 | INFO     | monitor loop #289: job 0:6931593364 is in state 'finished'
[2025-12-15 21:33:38] 2025-12-16 02:32:25,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 21:33:38] 2025-12-16 02:32:26,602 | INFO     | time since job start (4142s) is within the limit (174528.0s)
[2025-12-15 21:33:38] 2025-12-16 02:32:28,223 | INFO     | monitor loop #290: job 0:6931593364 is in state 'finished'
[2025-12-15 21:33:38] 2025-12-16 02:32:28,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 21:33:38] 2025-12-16 02:32:28,611 | INFO     | time since job start (4144s) is within the limit (174528.0s)
[2025-12-15 21:33:38] 2025-12-16 02:32:30,618 | INFO     | time since job start (4146s) is within the limit (174528.0s)
[2025-12-15 21:33:38] 2025-12-16 02:32:30,729 | INFO     | monitor loop #291: job 0:6931593364 is in state 'finished'
[2025-12-15 21:33:38] 2025-12-16 02:32:30,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 21:33:38] 2025-12-16 02:32:32,624 | INFO     | time since job start (4148s) is within the limit (174528.0s)
[2025-12-15 21:33:38] 2025-12-16 02:32:33,241 | INFO     | monitor loop #292: job 0:6931593364 is in state 'finished'
[2025-12-15 21:33:38] 2025-12-16 02:32:33,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 21:33:38] 2025-12-16 02:32:34,633 | INFO     | time since job start (4150s) is within the limit (174528.0s)
[2025-12-15 21:33:38] 2025-12-16 02:32:34,633 | INFO     | 4156s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-15 21:33:38] 2025-12-16 02:32:34,668 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-15 21:33:38] 2025-12-16 02:32:34,673 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9971796875016
[2025-12-15 21:33:38] 2025-12-16 02:32:34,690 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6931593364/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 21:33:38] 2025-12-16 02:32:34,691 | INFO     | extracted standard info from prmon json
[2025-12-15 21:33:38] 2025-12-16 02:32:34,691 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 21:33:38] 2025-12-16 02:32:34,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 21:33:38] 2025-12-16 02:32:34,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 21:33:38] 2025-12-16 02:32:34,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 21:33:38] 2025-12-16 02:32:34,692 | INFO     | fitting pss+swap vs Time
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | sum of square deviations: 63666310.0
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | sum of deviations: -962663387.0000001
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | mean x: 1765850396.0
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | mean y: 2607440.881355932
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | intersect: 26703063665.667297
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | chi2: 0.34409226085457084
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | current memory leak: -15.12 B/s (using 59 data points, chi2=0.34)
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | ..............................
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | . Timing measurements:
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | . get job = 0 s
[2025-12-15 21:33:38] 2025-12-16 02:32:34,693 | INFO     | . initial setup = 6 s
[2025-12-15 21:33:38] 2025-12-16 02:32:34,694 | INFO     | . payload setup = 36 s
[2025-12-15 21:33:38] 2025-12-16 02:32:34,694 | INFO     | . stage-in = 0 s
[2025-12-15 21:33:38] 2025-12-16 02:32:34,694 | INFO     | . payload execution = 4031 s
[2025-12-15 21:33:38] 2025-12-16 02:32:34,694 | INFO     | . stage-out = 1 s
[2025-12-15 21:33:38] 2025-12-16 02:32:34,694 | INFO     | . log creation = 0 s
[2025-12-15 21:33:38] 2025-12-16 02:32:34,694 | INFO     | ..............................
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | 
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | job summary report
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | --------------------------------------------------
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | PanDA job id: 6931593364
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | task id: 47899050
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | errors: (none)
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | pilot state: finished 
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | transexitcode: 0
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | exeerrorcode: 0
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | exeerrordiag: 
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | exitcode: 0
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | exitmsg: OK
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | cpuconsumptiontime: 20878 s
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | nevents: 400
[2025-12-15 21:33:38] 2025-12-16 02:32:35,090 | INFO     | neventsw: 0
[2025-12-15 21:33:38] 2025-12-16 02:32:35,091 | INFO     | pid: 880680
[2025-12-15 21:33:38] 2025-12-16 02:32:35,091 | INFO     | pgrp: 880680
[2025-12-15 21:33:38] 2025-12-16 02:32:35,091 | INFO     | corecount: 8
[2025-12-15 21:33:38] 2025-12-16 02:32:35,091 | INFO     | event service: False
[2025-12-15 21:33:38] 2025-12-16 02:32:35,091 | INFO     | sizes: {0: 2283761, 1: 2283960, 12: 2283960, 22: 2283988, 29: 2284278, 33: 2284306, 4068: 2310399, 4069: 2319397, 4071: 2319453, 4092: 2319647}
[2025-12-15 21:33:38] 2025-12-16 02:32:35,091 | INFO     | --------------------------------------------------
[2025-12-15 21:33:38] 2025-12-16 02:32:35,091 | INFO     | 
[2025-12-15 21:33:38] 2025-12-16 02:32:35,091 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 21:33:38] 2025-12-16 02:32:35,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 21:33:38] 2025-12-16 02:32:35,140 | INFO     | job 6931593364 has completed (purged errors)
[2025-12-15 21:33:38] 2025-12-16 02:32:35,140 | INFO     | overall cleanup function is called
[2025-12-15 21:33:38] 2025-12-16 02:32:36,148 | INFO     | --- collectZombieJob: --- 10, [880680]
[2025-12-15 21:33:38] 2025-12-16 02:32:36,148 | INFO     | zombie collector waiting for pid 880680
[2025-12-15 21:33:38] 2025-12-16 02:32:36,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 21:33:38] 2025-12-16 02:32:36,148 | INFO     | collected zombie processes
[2025-12-15 21:33:38] 2025-12-16 02:32:36,148 | INFO     | will attempt to kill all subprocesses of pid=880680
[2025-12-15 21:33:38] 2025-12-16 02:32:36,795 | INFO     | process IDs to be killed: [880680] (in reverse order)
[2025-12-15 21:33:38] 2025-12-16 02:32:37,042 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 21:33:38] 2025-12-16 02:32:37,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 21:33:38] 2025-12-16 02:32:37,077 | INFO     | did not find any defunct processes belonging to 880680
[2025-12-15 21:33:38] 2025-12-16 02:32:37,106 | INFO     | did not find any defunct processes belonging to 880680
[2025-12-15 21:33:38] 2025-12-16 02:32:37,106 | INFO     | ready for new job
[2025-12-15 21:33:38] 2025-12-16 02:32:37,106 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 21:33:38] 2025-12-16 02:32:37,108 | INFO     | ***************************************
[2025-12-15 21:33:38] 2025-12-16 02:32:37,108 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 21:33:38] 2025-12-16 02:32:37,108 | INFO     | ***************************************
[2025-12-15 21:33:38] 2025-12-16 02:32:37,108 | INFO     | 
[2025-12-15 21:33:38] 2025-12-16 02:32:37,112 | INFO     | architecture information:
[2025-12-15 21:33:38] 2025-12-16 02:32:37,113 | INFO     | executing command: cat /etc/os-release
[2025-12-15 21:33:38] 2025-12-16 02:32:37,158 | INFO     | cat /etc/os-release:
[2025-12-15 21:33:38] NAME="CentOS Linux"
[2025-12-15 21:33:38] VERSION="7 (Core)"
[2025-12-15 21:33:38] ID="centos"
[2025-12-15 21:33:38] ID_LIKE="rhel fedora"
[2025-12-15 21:33:38] VERSION_ID="7"
[2025-12-15 21:33:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 21:33:38] ANSI_COLOR="0;31"
[2025-12-15 21:33:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 21:33:38] HOME_URL="https://www.centos.org/"
[2025-12-15 21:33:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 21:33:38] 
[2025-12-15 21:33:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 21:33:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 21:33:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 21:33:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 21:33:38] 
[2025-12-15 21:33:38] 2025-12-16 02:32:37,158 | INFO     | ***************************************
[2025-12-15 21:33:38] 2025-12-16 02:32:37,665 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-12-15 21:33:38] 2025-12-16 02:32:37,684 | INFO     | sufficient remaining disk space (169449881600 B)
[2025-12-15 21:33:38] 2025-12-16 02:32:37,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 21:33:38] 2025-12-16 02:32:37,684 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 21:33:38] 2025-12-16 02:32:37,684 | INFO     | update_server=False
[2025-12-15 21:33:38] 2025-12-16 02:32:37,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 21:33:38] 2025-12-16 02:32:37,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 21:33:38] 2025-12-16 02:32:37,686 | INFO     | aborting loop
[2025-12-15 21:33:38] 2025-12-16 02:32:37,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 21:33:38] 2025-12-16 02:32:38,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 21:33:38] 2025-12-16 02:32:38,246 | INFO     | all data control threads have been joined
[2025-12-15 21:33:38] 2025-12-16 02:32:38,504 | INFO     | all job control threads have been joined
[2025-12-15 21:33:38] 2025-12-16 02:32:38,658 | INFO     | all payload control threads have been joined
[2025-12-15 21:33:38] 2025-12-16 02:32:38,693 | INFO     | [job] retrieve thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:38,693 | INFO     | [job] job monitor thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:38,737 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:38,903 | INFO     | [payload] failed_post thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:38,974 | INFO     | [payload] validate_post thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:39,252 | INFO     | [data] control thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:39,510 | INFO     | [job] control thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:39,664 | INFO     | [payload] control thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:39,693 | INFO     | [data] copytool_out thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:39,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 21:33:38] 2025-12-16 02:32:39,791 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:40,142 | INFO     | [data] copytool_in thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:40,146 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:40,159 | INFO     | [job] validate thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:40,767 | INFO     | [job] queue monitor thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:42,207 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:32:47,788 | INFO     | job.realtimelogging is not enabled
[2025-12-15 21:33:38] 2025-12-16 02:32:48,796 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 21:33:38] 2025-12-16 02:33:08,385 | INFO     | PID=865427 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 21:33:38] 2025-12-16 02:33:08,385 | INFO     | .. there are 48 such processes running
[2025-12-15 21:33:38] 2025-12-16 02:33:08,385 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 21:33:38] 2025-12-16 02:33:08,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 21:33:38] 2025-12-16 02:33:08,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 21:33:38] 2025-12-16 02:33:31,001 | INFO     | [monitor] cgroup control has ended
[2025-12-15 21:33:38] 2025-12-16 02:33:32,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243765425984)>', '<ExcThread(monitor, started 140243416110848)>']
[2025-12-15 21:33:38] 2025-12-16 02:33:32,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 21:33:38] 2025-12-16 02:33:32,520 | INFO     | [monitor] control thread has ended
[2025-12-15 21:33:38] 2025-12-16 02:33:37,484 | INFO     | all workflow threads have been joined
[2025-12-15 21:33:38] 2025-12-16 02:33:37,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 21:33:38] 2025-12-16 02:33:37,486 | INFO     | traces error code: 0
[2025-12-15 21:33:38] 2025-12-16 02:33:37,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 21:33:38] 2025-12-16 02:33:37,666 [wrapper] ==== pilot stdout END ====
[2025-12-15 21:33:38] 2025-12-16 02:33:37,739 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 21:33:38] 2025-12-16 02:33:37,767 [wrapper] pilotpid: 865427
[2025-12-15 21:33:38] 2025-12-16 02:33:37,780 [wrapper] Pilot exit status: 0
[2025-12-15 21:33:38] 2025-12-16 02:33:37,799 [wrapper] pandaids: 6931593364
[2025-12-15 21:33:38] 2025-12-16 02:33:37,998 [wrapper] cleanup supervisor_pilot 1309092 865428
[2025-12-15 21:33:38] 2025-12-16 02:33:38,021 [wrapper] Test setup, not cleaning
[2025-12-15 21:33:38] 2025-12-16 02:33:38,031 [wrapper] apfmon messages muted
[2025-12-15 21:33:38] 2025-12-16 02:33:38,039 [wrapper] ==== wrapper stdout END ====
[2025-12-15 21:33:38] 2025-12-16 02:33:38,049 [wrapper] ==== wrapper stderr END ====
[2025-12-15 21:33:38]  *** Error codes and diagnostics ***
[2025-12-15 21:33:38]     "exeErrorCode": 0,
[2025-12-15 21:33:38]     "exeErrorDiag": "",
[2025-12-15 21:33:38]     "pilotErrorCode": 0,
[2025-12-15 21:33:38]     "pilotErrorDiag": "",
[2025-12-15 21:33:38]  *** Listing of results directory ***
[2025-12-15 21:33:38] total 369424
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 05:33 queuedata.json
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 05:33 pilot3.tar.gz
[2025-12-15 21:33:38] -rwx------. 1 boincer umatlas     36322 Dec 15 05:33 runpilot2-wrapper.sh
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas       100 Dec 15 20:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 21:33:38] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 20:22 run_atlas
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas       105 Dec 15 20:22 job.xml
[2025-12-15 21:33:38] -rw-r--r--. 2 boincer umatlas 195931884 Dec 15 20:22 EVNT.47899048._000052.pool.root.1
[2025-12-15 21:33:38] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 20:22 shared
[2025-12-15 21:33:38] -rw-r--r--. 2 boincer umatlas    592379 Dec 15 20:22 input.tar.gz
[2025-12-15 21:33:38] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 20:22 start_atlas.sh
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas         0 Dec 15 20:22 boinc_lockfile
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas      2489 Dec 15 20:22 pandaJob.out
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas        57 Dec 15 20:22 setup.sh.local
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas    994531 Dec 15 20:23 agis_schedconf.cvmfs.json
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas   1516240 Dec 15 20:23 agis_ddmendpoints.agis.ALL.json
[2025-12-15 21:33:38] drwx------. 5 boincer umatlas      4096 Dec 15 20:23 pilot3
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas      7171 Dec 15 21:28 init_data.xml
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas       529 Dec 15 21:31 boinc_task_state.xml
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas 176646563 Dec 15 21:31 HITS.47899050._001282.pool.root.1
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas      1050 Dec 15 21:32 memory_monitor_summary.json
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas    307491 Dec 15 21:32 log.47899050._001282.job.log.tgz.1
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas      7802 Dec 15 21:32 heartbeat.json
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas        95 Dec 15 21:33 pilot_heartbeat.json
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 21:33 boinc_mmap_file
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas        27 Dec 15 21:33 wrapper_checkpoint.txt
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas      4896 Dec 15 21:33 pilotlog.txt
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas    585763 Dec 15 21:33 log.47899050._001282.job.log.1
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas       357 Dec 15 21:33 output.list
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas       620 Dec 15 21:33 runtime_log
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas    911360 Dec 15 21:33 result.tar.gz
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas      9332 Dec 15 21:33 runtime_log.err
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas       655 Dec 15 21:33 GD2KDms4Kp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXhXKDmeD3xen.diag
[2025-12-15 21:33:38] -rw-r--r--. 1 boincer umatlas     22371 Dec 15 21:33 stderr.txt
[2025-12-15 21:33:38] HITS file was successfully produced:
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas 176646563 Dec 15 21:31 shared/HITS.pool.root.1
[2025-12-15 21:33:38]  *** Contents of shared directory: ***
[2025-12-15 21:33:38] total 365344
[2025-12-15 21:33:38] -rw-r--r--. 2 boincer umatlas 195931884 Dec 15 20:22 ATLAS.root_0
[2025-12-15 21:33:38] -rw-r--r--. 2 boincer umatlas    592379 Dec 15 20:22 input.tar.gz
[2025-12-15 21:33:38] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 20:22 start_atlas.sh
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas 176646563 Dec 15 21:31 HITS.pool.root.1
[2025-12-15 21:33:38] -rw-------. 1 boincer umatlas    911360 Dec 15 21:33 result.tar.gz
21:33:40 (845205): run_atlas exited; CPU time 21015.516485
21:33:40 (845205): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN