Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:07:18 (2962990): wrapper (7.7.26015): starting
21:07:18 (2962990): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 21:07:18] Arguments: --nthreads 8
[2025-12-15 21:07:18] Threads: 8
[2025-12-15 21:07:18] Checking for CVMFS
[2025-12-15 21:07:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 21:07:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 21:07:18] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 21:07:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 21:07:19] 2.13.2.0 9825 64906 383696 154053 0 272 25880566 40960001 25919 16776704 0 167773661 99.579 181649408 32650 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 21:07:19] CVMFS is ok
[2025-12-15 21:07:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 21:07:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 21:07:19] Further information can be found at the LHC@home message board.
[2025-12-15 21:07:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 21:07:19] Checking for apptainer binary...
[2025-12-15 21:07:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 21:07:19] Running /usr/bin/apptainer --version
[2025-12-15 21:07:19] apptainer version 1.4.4-1.el9
[2025-12-15 21:07:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 21:07:20] c-211-35-1.aglt2.org
[2025-12-15 21:07:20] apptainer works
[2025-12-15 21:07:20] Set ATHENA_PROC_NUMBER=8
[2025-12-15 21:07:20] Set ATHENA_CORE_NUMBER=8
[2025-12-15 21:07:20] Starting ATLAS job with PandaID=6929525706
[2025-12-15 21:07:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 03:02:37]  *** The last 200 lines of the pilot log: ***
[2025-12-16 03:02:37] 2025-12-16 05:20:12,447 | INFO     | monitor loop #777: job 0:6929525706 is in state 'finished'
[2025-12-16 03:02:37] 2025-12-16 05:20:12,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,079 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 03:02:37] 2025-12-16 05:20:13,093 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2415.203270833333
[2025-12-16 03:02:37] 2025-12-16 05:20:13,112 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6929525706/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,112 | INFO     | extracted standard info from prmon json
[2025-12-16 03:02:37] 2025-12-16 05:20:13,112 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 03:02:37] 2025-12-16 05:20:13,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 03:02:37] 2025-12-16 05:20:13,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 03:02:37] 2025-12-16 05:20:13,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 03:02:37] 2025-12-16 05:20:13,116 | INFO     | fitting pss+swap vs Time
[2025-12-16 03:02:37] 2025-12-16 05:20:13,117 | INFO     | sum of square deviations: 2060637958.8297827
[2025-12-16 03:02:37] 2025-12-16 05:20:13,118 | INFO     | sum of deviations: 10158697908.031918
[2025-12-16 03:02:37] 2025-12-16 05:20:13,118 | INFO     | mean x: 1765856663.3510637
[2025-12-16 03:02:37] 2025-12-16 05:20:13,118 | INFO     | mean y: 2483563.090425532
[2025-12-16 03:02:37] 2025-12-16 05:20:13,118 | INFO     | intersect: -8702977925.183796
[2025-12-16 03:02:37] 2025-12-16 05:20:13,118 | INFO     | chi2: 2.3144608043447175
[2025-12-16 03:02:37] 2025-12-16 05:20:13,119 | INFO     | sum of square deviations: 1900627940.109282
[2025-12-16 03:02:37] 2025-12-16 05:20:13,120 | INFO     | sum of deviations: 21970805935.754097
[2025-12-16 03:02:37] 2025-12-16 05:20:13,120 | INFO     | mean x: 1765856510.874317
[2025-12-16 03:02:37] 2025-12-16 05:20:13,120 | INFO     | mean y: 2494571.0327868853
[2025-12-16 03:02:37] 2025-12-16 05:20:13,120 | INFO     | intersect: -20410385768.175896
[2025-12-16 03:02:37] 2025-12-16 05:20:13,120 | INFO     | chi2: 1.590147999039907
[2025-12-16 03:02:37] 2025-12-16 05:20:13,120 | INFO     | current chi2=1.590147999039907 (change=31.295099227652802 %)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,121 | INFO     | sum of square deviations: 1749129708.6797802
[2025-12-16 03:02:37] 2025-12-16 05:20:13,122 | INFO     | sum of deviations: 21457743787.117985
[2025-12-16 03:02:37] 2025-12-16 05:20:13,122 | INFO     | mean x: 1765856358.3988764
[2025-12-16 03:02:37] 2025-12-16 05:20:13,122 | INFO     | mean y: 2494054.5898876404
[2025-12-16 03:02:37] 2025-12-16 05:20:13,122 | INFO     | intersect: -21660446729.816616
[2025-12-16 03:02:37] 2025-12-16 05:20:13,122 | INFO     | chi2: 1.5913835449453861
[2025-12-16 03:02:37] 2025-12-16 05:20:13,122 | INFO     | current chi2=1.5913835449453861 (change=-0.0777000572415356 %)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,122 | INFO     | right removable region: 177
[2025-12-16 03:02:37] 2025-12-16 05:20:13,123 | INFO     | sum of square deviations: 1900530340.109282
[2025-12-16 03:02:37] 2025-12-16 05:20:13,124 | INFO     | sum of deviations: -20194343138.28962
[2025-12-16 03:02:37] 2025-12-16 05:20:13,124 | INFO     | mean x: 1765856815.874317
[2025-12-16 03:02:37] 2025-12-16 05:20:13,124 | INFO     | mean y: 2512162.683060109
[2025-12-16 03:02:37] 2025-12-16 05:20:13,124 | INFO     | intersect: 18765863486.399876
[2025-12-16 03:02:37] 2025-12-16 05:20:13,124 | INFO     | chi2: 0.7975242130250543
[2025-12-16 03:02:37] 2025-12-16 05:20:13,124 | INFO     | current chi2=0.7975242130250543 (change=65.54168420014122 %)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,125 | INFO     | sum of square deviations: 1748934508.6797802
[2025-12-16 03:02:37] 2025-12-16 05:20:13,126 | INFO     | sum of deviations: -23507769486.28091
[2025-12-16 03:02:37] 2025-12-16 05:20:13,126 | INFO     | mean x: 1765856968.3988764
[2025-12-16 03:02:37] 2025-12-16 05:20:13,126 | INFO     | mean y: 2515480.595505618
[2025-12-16 03:02:37] 2025-12-16 05:20:13,126 | INFO     | intersect: 23737743045.062363
[2025-12-16 03:02:37] 2025-12-16 05:20:13,126 | INFO     | chi2: 0.7616824424128255
[2025-12-16 03:02:37] 2025-12-16 05:20:13,126 | INFO     | current chi2=0.7616824424128255 (change=4.494129460506153 %)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,126 | INFO     | left removable region: 20
[2025-12-16 03:02:37] 2025-12-16 05:20:13,127 | INFO     | sum of square deviations: 1200146982.942676
[2025-12-16 03:02:37] 2025-12-16 05:20:13,128 | INFO     | sum of deviations: -9753781719.101904
[2025-12-16 03:02:37] 2025-12-16 05:20:13,128 | INFO     | mean x: 1765856938.0191083
[2025-12-16 03:02:37] 2025-12-16 05:20:13,128 | INFO     | mean y: 2527045.700636943
[2025-12-16 03:02:37] 2025-12-16 05:20:13,128 | INFO     | intersect: 14353921804.339731
[2025-12-16 03:02:37] 2025-12-16 05:20:13,128 | INFO     | chi2: 0.014437614829569196
[2025-12-16 03:02:37] 2025-12-16 05:20:13,128 | INFO     | current memory leak: -8.13 B/s (using 157 data points, chi2=0.01)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,129 | INFO     | could have reported an average CPU frequency of 2368 MHz (10 samples)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,129 | INFO     | ..............................
[2025-12-16 03:02:37] 2025-12-16 05:20:13,129 | INFO     | . Timing measurements:
[2025-12-16 03:02:37] 2025-12-16 05:20:13,129 | INFO     | . get job = 0 s
[2025-12-16 03:02:37] 2025-12-16 05:20:13,129 | INFO     | . initial setup = 3 s
[2025-12-16 03:02:37] 2025-12-16 05:20:13,129 | INFO     | . payload setup = 21 s
[2025-12-16 03:02:37] 2025-12-16 05:20:13,129 | INFO     | . stage-in = 0 s
[2025-12-16 03:02:37] 2025-12-16 05:20:13,129 | INFO     | . payload execution = 11449 s
[2025-12-16 03:02:37] 2025-12-16 05:20:13,130 | INFO     | . stage-out = 4 s
[2025-12-16 03:02:37] 2025-12-16 05:20:13,130 | INFO     | . log creation = 0 s
[2025-12-16 03:02:37] 2025-12-16 05:20:13,130 | INFO     | ..............................
[2025-12-16 03:02:37] 2025-12-16 05:20:13,450 | INFO     | 
[2025-12-16 03:02:37] 2025-12-16 05:20:13,450 | INFO     | job summary report
[2025-12-16 03:02:37] 2025-12-16 05:20:13,450 | INFO     | --------------------------------------------------
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | PanDA job id: 6929525706
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | task id: 47898763
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | errors: (none)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | pilot state: finished 
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | transexitcode: 0
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | exeerrorcode: 0
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | exeerrordiag: 
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | exitcode: 0
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | exitmsg: OK
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | cpuconsumptiontime: 69264 s
[2025-12-16 03:02:37] 2025-12-16 05:20:13,451 | INFO     | nevents: 400
[2025-12-16 03:02:37] 2025-12-16 05:20:13,452 | INFO     | neventsw: 0
[2025-12-16 03:02:37] 2025-12-16 05:20:13,452 | INFO     | pid: 2974779
[2025-12-16 03:02:37] 2025-12-16 05:20:13,452 | INFO     | pgrp: 2974779
[2025-12-16 03:02:37] 2025-12-16 05:20:13,452 | INFO     | corecount: 8
[2025-12-16 03:02:37] 2025-12-16 05:20:13,452 | INFO     | event service: False
[2025-12-16 03:02:37] 2025-12-16 05:20:13,452 | INFO     | sizes: {0: 2283787, 1: 2283986, 12: 2283986, 19: 2284276, 23: 2284304, 11475: 2314300, 11481: 2323354, 11497: 2323492}
[2025-12-16 03:02:37] 2025-12-16 05:20:13,452 | INFO     | --------------------------------------------------
[2025-12-16 03:02:37] 2025-12-16 05:20:13,452 | INFO     | 
[2025-12-16 03:02:37] 2025-12-16 05:20:13,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-16 03:02:37] 2025-12-16 05:20:13,476 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,476 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,476 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,476 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,478 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,478 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 03:02:37] 2025-12-16 05:20:13,478 | INFO     | job 6929525706 has completed (purged errors)
[2025-12-16 03:02:37] 2025-12-16 05:20:13,478 | INFO     | overall cleanup function is called
[2025-12-16 03:02:37] 2025-12-16 05:20:14,492 | INFO     | --- collectZombieJob: --- 10, [2974779]
[2025-12-16 03:02:37] 2025-12-16 05:20:14,493 | INFO     | zombie collector waiting for pid 2974779
[2025-12-16 03:02:37] 2025-12-16 05:20:14,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 03:02:37] 2025-12-16 05:20:14,493 | INFO     | collected zombie processes
[2025-12-16 03:02:37] 2025-12-16 05:20:14,493 | INFO     | will attempt to kill all subprocesses of pid=2974779
[2025-12-16 03:02:37] 2025-12-16 05:20:15,410 | INFO     | process IDs to be killed: [2974779] (in reverse order)
[2025-12-16 03:02:37] 2025-12-16 05:20:15,701 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 03:02:37] 2025-12-16 05:20:15,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 03:02:37] 2025-12-16 05:20:15,717 | INFO     | did not find any defunct processes belonging to 2974779
[2025-12-16 03:02:37] 2025-12-16 05:20:15,758 | INFO     | did not find any defunct processes belonging to 2974779
[2025-12-16 03:02:37] 2025-12-16 05:20:15,759 | INFO     | ready for new job
[2025-12-16 03:02:37] 2025-12-16 05:20:15,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 03:02:37] 2025-12-16 05:20:15,761 | INFO     | ***************************************
[2025-12-16 03:02:37] 2025-12-16 05:20:15,761 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 03:02:37] 2025-12-16 05:20:15,761 | INFO     | ***************************************
[2025-12-16 03:02:37] 2025-12-16 05:20:15,761 | INFO     | 
[2025-12-16 03:02:37] 2025-12-16 05:20:15,796 | INFO     | architecture information:
[2025-12-16 03:02:37] 2025-12-16 05:20:15,797 | INFO     | executing command: cat /etc/os-release
[2025-12-16 03:02:37] 2025-12-16 05:20:15,897 | INFO     | cat /etc/os-release:
[2025-12-16 03:02:37] NAME="CentOS Linux"
[2025-12-16 03:02:37] VERSION="7 (Core)"
[2025-12-16 03:02:37] ID="centos"
[2025-12-16 03:02:37] ID_LIKE="rhel fedora"
[2025-12-16 03:02:37] VERSION_ID="7"
[2025-12-16 03:02:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 03:02:37] ANSI_COLOR="0;31"
[2025-12-16 03:02:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 03:02:37] HOME_URL="https://www.centos.org/"
[2025-12-16 03:02:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 03:02:37] 
[2025-12-16 03:02:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 03:02:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 03:02:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 03:02:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 03:02:37] 
[2025-12-16 03:02:37] 2025-12-16 05:20:15,897 | INFO     | ***************************************
[2025-12-16 03:02:37] 2025-12-16 05:20:16,401 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-16 03:02:37] 2025-12-16 05:20:16,478 | INFO     | sufficient remaining disk space (126533763072 B)
[2025-12-16 03:02:37] 2025-12-16 05:20:16,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 03:02:37] 2025-12-16 05:20:16,478 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 03:02:37] 2025-12-16 05:20:16,478 | INFO     | update_server=False
[2025-12-16 03:02:37] 2025-12-16 05:20:16,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 03:02:37] 2025-12-16 05:20:16,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:02:37] 2025-12-16 05:20:16,485 | INFO     | aborting loop
[2025-12-16 03:02:37] 2025-12-16 05:20:16,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 03:02:37] 2025-12-16 05:20:16,581 | INFO     | all job control threads have been joined
[2025-12-16 03:02:37] 2025-12-16 05:20:17,187 | INFO     | all data control threads have been joined
[2025-12-16 03:02:37] 2025-12-16 05:20:17,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 03:02:37] 2025-12-16 05:20:17,485 | INFO     | [job] retrieve thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:17,493 | INFO     | [job] job monitor thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:17,581 | INFO     | [payload] failed_post thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:17,588 | INFO     | [job] control thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:17,638 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:17,646 | INFO     | [payload] validate_post thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:17,694 | INFO     | all payload control threads have been joined
[2025-12-16 03:02:37] 2025-12-16 05:20:17,801 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:17,848 | INFO     | [data] copytool_in thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:18,069 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:18,193 | INFO     | [data] control thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:18,398 | INFO     | [job] validate thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:18,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:02:37] 2025-12-16 05:20:18,700 | INFO     | [payload] control thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:18,809 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:19,304 | INFO     | [data] copytool_out thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:19,470 | INFO     | [job] queue monitor thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:20,496 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 03:02:37] 2025-12-16 05:20:45,988 | INFO     | PID=2968095 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 03:02:37] 2025-12-16 05:20:45,988 | INFO     | .. there are 27 such processes running
[2025-12-16 03:02:37] 2025-12-16 05:20:45,989 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 03:02:37] 2025-12-16 05:20:45,989 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 03:02:37] 2025-12-16 05:20:45,989 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 03:02:37] 2025-12-16 05:21:14,702 | INFO     | [monitor] cgroup control has ended
[2025-12-16 03:02:37] 2025-12-16 05:21:15,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530416219968)>', '<ExcThread(monitor, started 140529601844992)>']
[2025-12-16 03:02:37] 2025-12-16 05:21:16,167 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 03:02:37] 2025-12-16 05:21:16,168 | INFO     | [monitor] control thread has ended
[2025-12-16 03:02:37] 2025-12-16 05:21:20,521 | INFO     | all workflow threads have been joined
[2025-12-16 03:02:37] 2025-12-16 05:21:20,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 03:02:37] 2025-12-16 05:21:20,522 | INFO     | traces error code: 0
[2025-12-16 03:02:37] 2025-12-16 05:21:20,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 03:02:37] 2025-12-16 05:21:20,965 [wrapper] ==== pilot stdout END ====
[2025-12-16 03:02:37] 2025-12-16 05:21:20,991 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 03:02:37] 2025-12-16 05:21:21,001 [wrapper] pilotpid: 2968095
[2025-12-16 03:02:37] 2025-12-16 05:21:21,028 [wrapper] Pilot exit status: 0
[2025-12-16 03:02:37] 2025-12-16 05:21:21,096 [wrapper] pandaids: 6929525706
[2025-12-16 03:02:37] 2025-12-16 05:21:21,299 [wrapper] cleanup supervisor_pilot 3412987 2968096
[2025-12-16 03:02:37] 2025-12-16 05:21:21,302 [wrapper] Test setup, not cleaning
[2025-12-16 03:02:37] 2025-12-16 05:21:21,305 [wrapper] apfmon messages muted
[2025-12-16 03:02:37] 2025-12-16 05:21:21,316 [wrapper] ==== wrapper stdout END ====
[2025-12-16 03:02:37] 2025-12-16 05:21:21,348 [wrapper] ==== wrapper stderr END ====
[2025-12-16 03:02:37]  *** Error codes and diagnostics ***
[2025-12-16 03:02:37]     "exeErrorCode": 0,
[2025-12-16 03:02:37]     "exeErrorDiag": "",
[2025-12-16 03:02:37]     "pilotErrorCode": 0,
[2025-12-16 03:02:37]     "pilotErrorDiag": "",
[2025-12-16 03:02:37]  *** Listing of results directory ***
[2025-12-16 03:02:37] total 447808
[2025-12-16 03:02:37] -rwx------. 1 boincer umatlas     36322 Dec 15 00:28 runpilot2-wrapper.sh
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 00:30 queuedata.json
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 00:30 pilot3.tar.gz
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas       100 Dec 15 21:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 03:02:37] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 21:07 run_atlas
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas       105 Dec 15 21:07 job.xml
[2025-12-16 03:02:37] -rw-r--r--. 2 boincer umatlas 224383789 Dec 15 21:07 EVNT.47898761._000627.pool.root.1
[2025-12-16 03:02:37] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 21:07 start_atlas.sh
[2025-12-16 03:02:37] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 21:07 shared
[2025-12-16 03:02:37] -rw-r--r--. 2 boincer umatlas    592392 Dec 15 21:07 input.tar.gz
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas         0 Dec 15 21:07 boinc_lockfile
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas      2508 Dec 15 21:07 pandaJob.out
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas        57 Dec 15 21:07 setup.sh.local
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas    994531 Dec 15 21:07 agis_schedconf.cvmfs.json
[2025-12-16 03:02:37] drwx------. 5 boincer umatlas      4096 Dec 15 21:07 pilot3
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas 226250121 Dec 16 00:19 HITS.47898763._014427.pool.root.1
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas       530 Dec 16 00:19 boinc_task_state.xml
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas      1045 Dec 16 00:19 memory_monitor_summary.json
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas   1516240 Dec 16 00:19 agis_ddmendpoints.agis.ALL.json
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas    435948 Dec 16 00:19 log.47898763._014427.job.log.tgz.1
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas      7834 Dec 16 00:20 heartbeat.json
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas        95 Dec 16 00:20 pilot_heartbeat.json
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas      4825 Dec 16 00:21 pilotlog.txt
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas   1563920 Dec 16 00:21 log.47898763._014427.job.log.1
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas       357 Dec 16 00:21 output.list
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas       620 Dec 16 00:21 runtime_log
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas   2017280 Dec 16 00:21 result.tar.gz
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas       656 Dec 16 00:21 VIILDmrJGp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmt1SKDmkcQd2n.diag
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas      9353 Dec 16 00:21 runtime_log.err
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas      6880 Dec 16 02:55 init_data.xml
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 03:02 boinc_mmap_file
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas        28 Dec 16 03:02 wrapper_checkpoint.txt
[2025-12-16 03:02:37] -rw-r--r--. 1 boincer umatlas     21207 Dec 16 03:02 stderr.txt
[2025-12-16 03:02:37] HITS file was successfully produced:
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas 226250121 Dec 16 00:19 shared/HITS.pool.root.1
[2025-12-16 03:02:37]  *** Contents of shared directory: ***
[2025-12-16 03:02:37] total 442652
[2025-12-16 03:02:37] -rw-r--r--. 2 boincer umatlas 224383789 Dec 15 21:07 ATLAS.root_0
[2025-12-16 03:02:37] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 21:07 start_atlas.sh
[2025-12-16 03:02:37] -rw-r--r--. 2 boincer umatlas    592392 Dec 15 21:07 input.tar.gz
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas 226250121 Dec 16 00:19 HITS.pool.root.1
[2025-12-16 03:02:37] -rw-------. 1 boincer umatlas   2017280 Dec 16 00:21 result.tar.gz
03:02:39 (2962990): run_atlas exited; CPU time 69721.216471
03:02:39 (2962990): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN