Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:20 (9391): wrapper (7.7.26015): starting
07:46:20 (9391): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 07:46:20] Arguments: --nthreads 8
[2025-12-16 07:46:20] Threads: 8
[2025-12-16 07:46:20] Checking for CVMFS
[2025-12-16 07:46:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 07:46:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 07:46:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 07:46:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 07:46:21] 2.11.2.0 20181 515 69500 154061 1 133 19239851 25165824 94 130560 0 200511 98.249 1727990 2504 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-16 07:46:21] CVMFS is ok
[2025-12-16 07:46:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 07:46:21] Checking for apptainer binary...
[2025-12-16 07:46:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 07:46:21] Running /usr/bin/apptainer --version
[2025-12-16 07:46:21] apptainer version 1.3.2-1.el7
[2025-12-16 07:46:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 07:46:23] cg-vwn427.simple-grid.lan
[2025-12-16 07:46:23] apptainer works
[2025-12-16 07:46:23] Set ATHENA_PROC_NUMBER=8
[2025-12-16 07:46:23] Set ATHENA_CORE_NUMBER=8
[2025-12-16 07:46:23] Starting ATLAS job with PandaID=6929783616
[2025-12-16 07:46:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 13:56:29]  *** The last 200 lines of the pilot log: ***
[2025-12-16 13:56:29] 2025-12-16 12:55:29,538 | INFO     | extracted standard info from prmon json
[2025-12-16 13:56:29] 2025-12-16 12:55:29,538 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 13:56:29] 2025-12-16 12:55:29,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 13:56:29] 2025-12-16 12:55:29,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 13:56:29] 2025-12-16 12:55:29,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 13:56:29] 2025-12-16 12:55:29,550 | INFO     | fitting pss+swap vs Time
[2025-12-16 13:56:29] 2025-12-16 12:55:29,551 | INFO     | sum of square deviations: 14588031660.0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,555 | INFO     | sum of deviations: -66529377574.00001
[2025-12-16 13:56:29] 2025-12-16 12:55:29,555 | INFO     | mean x: 1765878618.0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,555 | INFO     | mean y: 2517922.168975069
[2025-12-16 13:56:29] 2025-12-16 12:55:29,555 | INFO     | intersect: 8055887154.216235
[2025-12-16 13:56:29] 2025-12-16 12:55:29,556 | INFO     | chi2: 2.575779906336303
[2025-12-16 13:56:29] 2025-12-16 12:55:29,557 | INFO     | sum of square deviations: 13990234405.0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,561 | INFO     | sum of deviations: -41822881457.50001
[2025-12-16 13:56:29] 2025-12-16 12:55:29,561 | INFO     | mean x: 1765878465.5
[2025-12-16 13:56:29] 2025-12-16 12:55:29,561 | INFO     | mean y: 2524156.7668539328
[2025-12-16 13:56:29] 2025-12-16 12:55:29,561 | INFO     | intersect: 5281501162.653448
[2025-12-16 13:56:29] 2025-12-16 12:55:29,562 | INFO     | chi2: 1.8058237433871531
[2025-12-16 13:56:29] 2025-12-16 12:55:29,562 | INFO     | current chi2=1.8058237433871531 (change=29.892156587412316 %)
[2025-12-16 13:56:29] 2025-12-16 12:55:29,563 | INFO     | sum of square deviations: 13408995600.0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,567 | INFO     | sum of deviations: -41149486079.00001
[2025-12-16 13:56:29] 2025-12-16 12:55:29,568 | INFO     | mean x: 1765878313.0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,568 | INFO     | mean y: 2524333.407407407
[2025-12-16 13:56:29] 2025-12-16 12:55:29,568 | INFO     | intersect: 5421646482.869633
[2025-12-16 13:56:29] 2025-12-16 12:55:29,569 | INFO     | chi2: 1.804762623471523
[2025-12-16 13:56:29] 2025-12-16 12:55:29,569 | INFO     | current chi2=1.804762623471523 (change=0.05876099035223373 %)
[2025-12-16 13:56:29] 2025-12-16 12:55:29,569 | INFO     | right removable region: 350
[2025-12-16 13:56:29] 2025-12-16 12:55:29,570 | INFO     | sum of square deviations: 13990234405.0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,574 | INFO     | sum of deviations: -121855181974.0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,574 | INFO     | mean x: 1765878770.5
[2025-12-16 13:56:29] 2025-12-16 12:55:29,574 | INFO     | mean y: 2531944.404494382
[2025-12-16 13:56:29] 2025-12-16 12:55:29,575 | INFO     | intersect: 15383366367.47869
[2025-12-16 13:56:29] 2025-12-16 12:55:29,576 | INFO     | chi2: 1.1052864656435046
[2025-12-16 13:56:29] 2025-12-16 12:55:29,576 | INFO     | current chi2=1.1052864656435046 (change=57.08925040821424 %)
[2025-12-16 13:56:29] 2025-12-16 12:55:29,576 | INFO     | sum of square deviations: 13408995600.0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,580 | INFO     | sum of deviations: -122461190866.00005
[2025-12-16 13:56:29] 2025-12-16 12:55:29,581 | INFO     | mean x: 1765878923.0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,581 | INFO     | mean y: 2532090.621082621
[2025-12-16 13:56:29] 2025-12-16 12:55:29,581 | INFO     | intersect: 16129887359.180468
[2025-12-16 13:56:29] 2025-12-16 12:55:29,581 | INFO     | chi2: 1.0865173600622586
[2025-12-16 13:56:29] 2025-12-16 12:55:29,582 | INFO     | current chi2=1.0865173600622586 (change=1.6981213617158077 %)
[2025-12-16 13:56:29] 2025-12-16 12:55:29,582 | INFO     | left removable region: 20
[2025-12-16 13:56:29] 2025-12-16 12:55:29,582 | INFO     | sum of square deviations: 11143362422.5
[2025-12-16 13:56:29] 2025-12-16 12:55:29,586 | INFO     | sum of deviations: -76027078153.50002
[2025-12-16 13:56:29] 2025-12-16 12:55:29,586 | INFO     | mean x: 1765878892.5
[2025-12-16 13:56:29] 2025-12-16 12:55:29,586 | INFO     | mean y: 2533350.7545454544
[2025-12-16 13:56:29] 2025-12-16 12:55:29,587 | INFO     | intersect: 12050477901.012983
[2025-12-16 13:56:29] 2025-12-16 12:55:29,587 | INFO     | chi2: 0.27882645621103025
[2025-12-16 13:56:29] 2025-12-16 12:55:29,587 | INFO     | current memory leak: -6.82 B/s (using 330 data points, chi2=0.28)
[2025-12-16 13:56:29] 2025-12-16 12:55:29,588 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-12-16 13:56:29] 2025-12-16 12:55:29,588 | INFO     | ..............................
[2025-12-16 13:56:29] 2025-12-16 12:55:29,589 | INFO     | . Timing measurements:
[2025-12-16 13:56:29] 2025-12-16 12:55:29,589 | INFO     | . get job = 0 s
[2025-12-16 13:56:29] 2025-12-16 12:55:29,589 | INFO     | . initial setup = 2 s
[2025-12-16 13:56:29] 2025-12-16 12:55:29,589 | INFO     | . payload setup = 9 s
[2025-12-16 13:56:29] 2025-12-16 12:55:29,589 | INFO     | . stage-in = 0 s
[2025-12-16 13:56:29] 2025-12-16 12:55:29,589 | INFO     | . payload execution = 21980 s
[2025-12-16 13:56:29] 2025-12-16 12:55:29,589 | INFO     | . stage-out = 4 s
[2025-12-16 13:56:29] 2025-12-16 12:55:29,589 | INFO     | . log creation = 1 s
[2025-12-16 13:56:29] 2025-12-16 12:55:29,589 | INFO     | ..............................
[2025-12-16 13:56:29] 2025-12-16 12:55:29,717 | INFO     | 
[2025-12-16 13:56:29] 2025-12-16 12:55:29,717 | INFO     | job summary report
[2025-12-16 13:56:29] 2025-12-16 12:55:29,717 | INFO     | --------------------------------------------------
[2025-12-16 13:56:29] 2025-12-16 12:55:29,718 | INFO     | PanDA job id: 6929783616
[2025-12-16 13:56:29] 2025-12-16 12:55:29,718 | INFO     | task id: 47898763
[2025-12-16 13:56:29] 2025-12-16 12:55:29,718 | INFO     | errors: (none)
[2025-12-16 13:56:29] 2025-12-16 12:55:29,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 13:56:29] 2025-12-16 12:55:29,718 | INFO     | pilot state: finished 
[2025-12-16 13:56:29] 2025-12-16 12:55:29,718 | INFO     | transexitcode: 0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,718 | INFO     | exeerrorcode: 0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,718 | INFO     | exeerrordiag: 
[2025-12-16 13:56:29] 2025-12-16 12:55:29,718 | INFO     | exitcode: 0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,719 | INFO     | exitmsg: OK
[2025-12-16 13:56:29] 2025-12-16 12:55:29,719 | INFO     | cpuconsumptiontime: 82502 s
[2025-12-16 13:56:29] 2025-12-16 12:55:29,719 | INFO     | nevents: 400
[2025-12-16 13:56:29] 2025-12-16 12:55:29,719 | INFO     | neventsw: 0
[2025-12-16 13:56:29] 2025-12-16 12:55:29,719 | INFO     | pid: 19571
[2025-12-16 13:56:29] 2025-12-16 12:55:29,719 | INFO     | pgrp: 19571
[2025-12-16 13:56:29] 2025-12-16 12:55:29,719 | INFO     | corecount: 8
[2025-12-16 13:56:29] 2025-12-16 12:55:29,719 | INFO     | event service: False
[2025-12-16 13:56:29] 2025-12-16 12:55:29,719 | INFO     | sizes: {0: 2283959, 7: 2284221, 11: 2284249, 21994: 2317592, 21999: 2326648, 22110: 2326786}
[2025-12-16 13:56:29] 2025-12-16 12:55:29,720 | INFO     | --------------------------------------------------
[2025-12-16 13:56:29] 2025-12-16 12:55:29,720 | INFO     | 
[2025-12-16 13:56:29] 2025-12-16 12:55:29,720 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-12-16 13:56:29] 2025-12-16 12:55:30,165 | INFO     | time since job start (22129s) is within the limit (174528.0s)
[2025-12-16 13:56:29] 2025-12-16 12:55:30,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 13:56:29] 2025-12-16 12:55:30,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 13:56:29] 2025-12-16 12:55:30,305 | INFO     | job 6929783616 has completed (purged errors)
[2025-12-16 13:56:29] 2025-12-16 12:55:30,306 | INFO     | overall cleanup function is called
[2025-12-16 13:56:29] 2025-12-16 12:55:31,319 | INFO     | --- collectZombieJob: --- 10, [19571]
[2025-12-16 13:56:29] 2025-12-16 12:55:31,320 | INFO     | zombie collector waiting for pid 19571
[2025-12-16 13:56:29] 2025-12-16 12:55:31,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 13:56:29] 2025-12-16 12:55:31,320 | INFO     | collected zombie processes
[2025-12-16 13:56:29] 2025-12-16 12:55:31,320 | INFO     | will attempt to kill all subprocesses of pid=19571
[2025-12-16 13:56:29] 2025-12-16 12:55:31,431 | INFO     | process IDs to be killed: [19571] (in reverse order)
[2025-12-16 13:56:29] 2025-12-16 12:55:31,550 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 13:56:29] 2025-12-16 12:55:31,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 13:56:29] 2025-12-16 12:55:31,552 | INFO     | did not find any defunct processes belonging to 19571
[2025-12-16 13:56:29] 2025-12-16 12:55:31,555 | INFO     | did not find any defunct processes belonging to 19571
[2025-12-16 13:56:29] 2025-12-16 12:55:31,555 | INFO     | ready for new job
[2025-12-16 13:56:29] 2025-12-16 12:55:31,555 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 13:56:29] 2025-12-16 12:55:31,558 | INFO     | ***************************************
[2025-12-16 13:56:29] 2025-12-16 12:55:31,558 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 13:56:29] 2025-12-16 12:55:31,558 | INFO     | ***************************************
[2025-12-16 13:56:29] 2025-12-16 12:55:31,558 | INFO     | 
[2025-12-16 13:56:29] 2025-12-16 12:55:31,559 | INFO     | pilot is running in a VM
[2025-12-16 13:56:29] 2025-12-16 12:55:31,559 | INFO     | architecture information:
[2025-12-16 13:56:29] 2025-12-16 12:55:31,560 | INFO     | executing command: cat /etc/os-release
[2025-12-16 13:56:29] 2025-12-16 12:55:31,818 | INFO     | cat /etc/os-release:
[2025-12-16 13:56:29] NAME="CentOS Linux"
[2025-12-16 13:56:29] VERSION="7 (Core)"
[2025-12-16 13:56:29] ID="centos"
[2025-12-16 13:56:29] ID_LIKE="rhel fedora"
[2025-12-16 13:56:29] VERSION_ID="7"
[2025-12-16 13:56:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 13:56:29] ANSI_COLOR="0;31"
[2025-12-16 13:56:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 13:56:29] HOME_URL="https://www.centos.org/"
[2025-12-16 13:56:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 13:56:29] 
[2025-12-16 13:56:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 13:56:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 13:56:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 13:56:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 13:56:29] 
[2025-12-16 13:56:29] 2025-12-16 12:55:31,818 | INFO     | ***************************************
[2025-12-16 13:56:29] 2025-12-16 12:55:32,321 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-12-16 13:56:29] 2025-12-16 12:55:32,654 | INFO     | sufficient remaining disk space (495745761280 B)
[2025-12-16 13:56:29] 2025-12-16 12:55:32,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 13:56:29] 2025-12-16 12:55:32,655 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 13:56:29] 2025-12-16 12:55:32,655 | INFO     | update_server=False
[2025-12-16 13:56:29] 2025-12-16 12:55:32,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 13:56:29] 2025-12-16 12:55:32,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 13:56:29] 2025-12-16 12:55:32,765 | INFO     | all data control threads have been joined
[2025-12-16 13:56:29] 2025-12-16 12:55:32,999 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 13:56:29] 2025-12-16 12:55:33,000 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 13:56:29] 2025-12-16 12:55:33,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 13:56:29] 2025-12-16 12:55:33,000 | INFO     | will abort loop
[2025-12-16 13:56:29] 2025-12-16 12:55:33,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 13:56:29] 2025-12-16 12:55:33,180 | INFO     | all payload control threads have been joined
[2025-12-16 13:56:29] 2025-12-16 12:55:33,661 | INFO     | [job] retrieve thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:33,772 | INFO     | [data] control thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:33,993 | INFO     | all job control threads have been joined
[2025-12-16 13:56:29] 2025-12-16 12:55:34,006 | INFO     | [job] job monitor thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:34,187 | INFO     | [payload] control thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:34,198 | INFO     | [job] validate thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:34,430 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:34,464 | INFO     | [payload] failed_post thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:34,664 | INFO     | [data] copytool_out thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:34,709 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:34,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 13:56:29] 2025-12-16 12:55:34,933 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:35,000 | INFO     | [job] control thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:35,118 | INFO     | [data] copytool_in thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:35,123 | INFO     | [payload] validate_post thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:35,737 | INFO     | [job] queue monitor thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:37,115 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:55:43,551 | INFO     | job.realtimelogging is not enabled
[2025-12-16 13:56:29] 2025-12-16 12:55:44,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 13:56:29] 2025-12-16 12:56:03,303 | INFO     | PID=13134 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 13:56:29] 2025-12-16 12:56:03,304 | INFO     | .. there are 2 such processes running
[2025-12-16 13:56:29] 2025-12-16 12:56:03,304 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 13:56:29] 2025-12-16 12:56:03,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 13:56:29] 2025-12-16 12:56:03,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 13:56:29] 2025-12-16 12:56:18,693 | INFO     | [monitor] cgroup control has ended
[2025-12-16 13:56:29] 2025-12-16 12:56:19,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192213043008)>', '<ExcThread(monitor, started 140191423526656)>']
[2025-12-16 13:56:29] 2025-12-16 12:56:19,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 13:56:29] 2025-12-16 12:56:19,399 | INFO     | [monitor] control thread has ended
[2025-12-16 13:56:29] 2025-12-16 12:56:24,247 | INFO     | all workflow threads have been joined
[2025-12-16 13:56:29] 2025-12-16 12:56:24,248 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 13:56:29] 2025-12-16 12:56:24,248 | INFO     | traces error code: 0
[2025-12-16 13:56:29] 2025-12-16 12:56:24,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 13:56:29] 2025-12-16 12:56:24,685 [wrapper] ==== pilot stdout END ====
[2025-12-16 13:56:29] 2025-12-16 12:56:24,754 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 13:56:29] 2025-12-16 12:56:24,793 [wrapper] pilotpid: 13134
[2025-12-16 13:56:29] 2025-12-16 12:56:24,889 [wrapper] Pilot exit status: 0
[2025-12-16 13:56:29] 2025-12-16 12:56:25,433 [wrapper] pandaids: 6929783616
[2025-12-16 13:56:29] 2025-12-16 12:56:26,418 [wrapper] cleanup supervisor_pilot 28790 13135
[2025-12-16 13:56:29] 2025-12-16 12:56:26,499 [wrapper] Test setup, not cleaning
[2025-12-16 13:56:29] 2025-12-16 12:56:26,585 [wrapper] apfmon messages muted
[2025-12-16 13:56:29] 2025-12-16 12:56:26,678 [wrapper] ==== wrapper stdout END ====
[2025-12-16 13:56:29] 2025-12-16 12:56:26,762 [wrapper] ==== wrapper stderr END ====
[2025-12-16 13:56:29]  *** Error codes and diagnostics ***
[2025-12-16 13:56:29]     "exeErrorCode": 0,
[2025-12-16 13:56:29]     "exeErrorDiag": "",
[2025-12-16 13:56:29]     "pilotErrorCode": 0,
[2025-12-16 13:56:29]     "pilotErrorDiag": "",
[2025-12-16 13:56:29]  *** Listing of results directory ***
[2025-12-16 13:56:29] total 444588
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc    579449 Dec 15 14:27 pilot3.tar.gz
[2025-12-16 13:56:29] -rwx------. 1 boinc boinc     36322 Dec 15 14:30 runpilot2-wrapper.sh
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc      5112 Dec 15 14:33 queuedata.json
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc       100 Dec 16 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 13:56:29] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 07:46 run_atlas
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc       105 Dec 16 07:46 job.xml
[2025-12-16 13:56:29] -rw-r--r--. 2 boinc boinc 225317881 Dec 16 07:46 EVNT.47898761._000662.pool.root.1
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc      6392 Dec 16 07:46 init_data.xml
[2025-12-16 13:56:29] -rw-r--r--. 2 boinc boinc     15847 Dec 16 07:46 start_atlas.sh
[2025-12-16 13:56:29] drwxrwx--x. 2 boinc boinc        68 Dec 16 07:46 shared
[2025-12-16 13:56:29] -rw-r--r--. 2 boinc boinc    592398 Dec 16 07:46 input.tar.gz
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc         0 Dec 16 07:46 boinc_lockfile
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc      2508 Dec 16 07:46 pandaJob.out
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc    994531 Dec 16 07:46 agis_schedconf.cvmfs.json
[2025-12-16 13:56:29] drwx------. 5 boinc boinc      4096 Dec 16 07:46 pilot3
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc 218963557 Dec 16 13:52 HITS.47898763._016579.pool.root.1
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc       531 Dec 16 13:52 boinc_task_state.xml
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc      1019 Dec 16 13:53 memory_monitor_summary.json
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc   1516240 Dec 16 13:53 agis_ddmendpoints.agis.ALL.json
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc    574957 Dec 16 13:53 log.47898763._016579.job.log.tgz.1
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc        95 Dec 16 13:55 pilot_heartbeat.json
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc      7780 Dec 16 13:55 heartbeat.json
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc      5143 Dec 16 13:56 pilotlog.txt
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc      8192 Dec 16 13:56 boinc_mmap_file
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc        28 Dec 16 13:56 wrapper_checkpoint.txt
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc   2962035 Dec 16 13:56 log.47898763._016579.job.log.1
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc       357 Dec 16 13:56 output.list
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc       620 Dec 16 13:56 runtime_log
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc   3553280 Dec 16 13:56 result.tar.gz
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc      8833 Dec 16 13:56 runtime_log.err
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc       657 Dec 16 13:56 G7HKDmlpNp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmueTKDmkmmvFo.diag
[2025-12-16 13:56:29] -rw-r--r--. 1 boinc boinc     20651 Dec 16 13:56 stderr.txt
[2025-12-16 13:56:29] HITS file was successfully produced:
[2025-12-16 13:56:29] -rw-------. 1 boinc boinc 218963557 Dec 16 13:52 shared/HITS.pool.root.1
[2025-12-16 13:56:30]  *** Contents of shared directory: ***
[2025-12-16 13:56:30] total 437940
[2025-12-16 13:56:30] -rw-r--r--. 2 boinc boinc 225317881 Dec 16 07:46 ATLAS.root_0
[2025-12-16 13:56:30] -rw-r--r--. 2 boinc boinc     15847 Dec 16 07:46 start_atlas.sh
[2025-12-16 13:56:30] -rw-r--r--. 2 boinc boinc    592398 Dec 16 07:46 input.tar.gz
[2025-12-16 13:56:30] -rw-------. 1 boinc boinc 218963557 Dec 16 13:52 HITS.pool.root.1
[2025-12-16 13:56:30] -rw-------. 1 boinc boinc   3553280 Dec 16 13:56 result.tar.gz
13:56:31 (9391): run_atlas exited; CPU time 82708.562703
13:56:31 (9391): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN