Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:57:14 (1831461): wrapper (7.7.26015): starting
22:57:14 (1831461): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 22:57:14] Arguments: --nthreads 4
[2025-12-16 22:57:14] Threads: 4
[2025-12-16 22:57:14] Checking for CVMFS
[2025-12-16 22:57:14] No cvmfs_config command found, will try listing directly
[2025-12-16 22:57:14] CVMFS is ok
[2025-12-16 22:57:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 22:57:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 22:57:14] Further information can be found at the LHC@home message board.
[2025-12-16 22:57:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 22:57:14] Checking for apptainer binary...
[2025-12-16 22:57:14] which: no apptainer in ((null))
[2025-12-16 22:57:14] apptainer is not installed, using version from CVMFS
[2025-12-16 22:57:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 22:57:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-12-16 22:57:15] apptainer works
[2025-12-16 22:57:15] Set ATHENA_PROC_NUMBER=4
[2025-12-16 22:57:15] Set ATHENA_CORE_NUMBER=4
[2025-12-16 22:57:15] Starting ATLAS job with PandaID=6929722337
[2025-12-16 22:57:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 03:10:22]  *** The last 200 lines of the pilot log: ***
[2025-12-17 03:10:22] 2025-12-17 02:07:54,068 | INFO     | number of running child processes to parent process 1843352: 1
[2025-12-17 03:10:22] 2025-12-17 02:07:54,068 | INFO     | maximum number of monitored processes: 6
[2025-12-17 03:10:22] 2025-12-17 02:07:54,849 | INFO     | time since job start (15028s) is within the limit (174528.0s)
[2025-12-17 03:10:22] 2025-12-17 02:07:56,571 | INFO     | monitor loop #1086: job 0:6929722337 is in state 'finished'
[2025-12-17 03:10:22] 2025-12-17 02:07:56,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 03:10:22] 2025-12-17 02:07:56,853 | INFO     | time since job start (15030s) is within the limit (174528.0s)
[2025-12-17 03:10:22] 2025-12-17 02:07:57,180 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 03:10:22] 2025-12-17 02:07:57,191 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2629.7048281250004
[2025-12-17 03:10:22] 2025-12-17 02:07:57,204 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6929722337/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 03:10:22] 2025-12-17 02:07:57,205 | INFO     | extracted standard info from prmon json
[2025-12-17 03:10:22] 2025-12-17 02:07:57,205 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 03:10:22] 2025-12-17 02:07:57,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 03:10:22] 2025-12-17 02:07:57,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 03:10:22] 2025-12-17 02:07:57,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 03:10:22] 2025-12-17 02:07:57,210 | INFO     | fitting pss+swap vs Time
[2025-12-17 03:10:22] 2025-12-17 02:07:57,211 | INFO     | sum of square deviations: 4616114457.5
[2025-12-17 03:10:22] 2025-12-17 02:07:57,213 | INFO     | sum of deviations: -3531416727.4999995
[2025-12-17 03:10:22] 2025-12-17 02:07:57,213 | INFO     | mean x: 1765929746.5
[2025-12-17 03:10:22] 2025-12-17 02:07:57,213 | INFO     | mean y: 2355679.7195121953
[2025-12-17 03:10:22] 2025-12-17 02:07:57,213 | INFO     | intersect: 1353326047.5031047
[2025-12-17 03:10:22] 2025-12-17 02:07:57,213 | INFO     | chi2: 1.42494693716881
[2025-12-17 03:10:22] 2025-12-17 02:07:57,214 | INFO     | sum of square deviations: 4340323240.0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,216 | INFO     | sum of deviations: -3356811455.999999
[2025-12-17 03:10:22] 2025-12-17 02:07:57,216 | INFO     | mean x: 1765929594.0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,216 | INFO     | mean y: 2355776.286307054
[2025-12-17 03:10:22] 2025-12-17 02:07:57,216 | INFO     | intersect: 1368127946.6624074
[2025-12-17 03:10:22] 2025-12-17 02:07:57,216 | INFO     | chi2: 1.4248978358970392
[2025-12-17 03:10:22] 2025-12-17 02:07:57,217 | INFO     | current chi2=1.4248978358970392 (change=0.0034458315948431685 %)
[2025-12-17 03:10:22] 2025-12-17 02:07:57,217 | INFO     | right removable region: 240
[2025-12-17 03:10:22] 2025-12-17 02:07:57,217 | INFO     | sum of square deviations: 4340323240.0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,219 | INFO     | sum of deviations: -27318935216.999996
[2025-12-17 03:10:22] 2025-12-17 02:07:57,219 | INFO     | mean x: 1765929899.0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,219 | INFO     | mean y: 2368631.726141079
[2025-12-17 03:10:22] 2025-12-17 02:07:57,219 | INFO     | intersect: 11117514172.947247
[2025-12-17 03:10:22] 2025-12-17 02:07:57,220 | INFO     | chi2: 0.23941559557054967
[2025-12-17 03:10:22] 2025-12-17 02:07:57,220 | INFO     | current chi2=0.23941559557054967 (change=83.1982799270941 %)
[2025-12-17 03:10:22] 2025-12-17 02:07:57,220 | INFO     | sum of square deviations: 4075741535.0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,222 | INFO     | sum of deviations: -16828326627.000008
[2025-12-17 03:10:22] 2025-12-17 02:07:57,222 | INFO     | mean x: 1765930051.5
[2025-12-17 03:10:22] 2025-12-17 02:07:57,222 | INFO     | mean y: 2362569.3983050846
[2025-12-17 03:10:22] 2025-12-17 02:07:57,222 | INFO     | intersect: 7293710033.87312
[2025-12-17 03:10:22] 2025-12-17 02:07:57,222 | INFO     | chi2: 0.18399765311347363
[2025-12-17 03:10:22] 2025-12-17 02:07:57,223 | INFO     | current chi2=0.18399765311347363 (change=23.147173150942788 %)
[2025-12-17 03:10:22] 2025-12-17 02:07:57,223 | INFO     | left removable region: 20
[2025-12-17 03:10:22] 2025-12-17 02:07:57,223 | INFO     | sum of square deviations: 3301699115.0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,225 | INFO     | sum of deviations: 3495161286.0000014
[2025-12-17 03:10:22] 2025-12-17 02:07:57,225 | INFO     | mean x: 1765930173.5
[2025-12-17 03:10:22] 2025-12-17 02:07:57,225 | INFO     | mean y: 2350155.2363636363
[2025-12-17 03:10:22] 2025-12-17 02:07:57,225 | INFO     | intersect: -1867054221.4845192
[2025-12-17 03:10:22] 2025-12-17 02:07:57,225 | INFO     | chi2: 0.0020215297983824277
[2025-12-17 03:10:22] 2025-12-17 02:07:57,225 | INFO     | current memory leak: 1.06 B/s (using 220 data points, chi2=0.00)
[2025-12-17 03:10:22] 2025-12-17 02:07:57,226 | INFO     | could have reported an average CPU frequency of 2593 MHz (12 samples)
[2025-12-17 03:10:22] 2025-12-17 02:07:57,226 | INFO     | ..............................
[2025-12-17 03:10:22] 2025-12-17 02:07:57,226 | INFO     | . Timing measurements:
[2025-12-17 03:10:22] 2025-12-17 02:07:57,227 | INFO     | . get job = 0 s
[2025-12-17 03:10:22] 2025-12-17 02:07:57,227 | INFO     | . initial setup = 1 s
[2025-12-17 03:10:22] 2025-12-17 02:07:57,227 | INFO     | . payload setup = 6 s
[2025-12-17 03:10:22] 2025-12-17 02:07:57,227 | INFO     | . stage-in = 0 s
[2025-12-17 03:10:22] 2025-12-17 02:07:57,227 | INFO     | . payload execution = 14994 s
[2025-12-17 03:10:22] 2025-12-17 02:07:57,227 | INFO     | . stage-out = 1 s
[2025-12-17 03:10:22] 2025-12-17 02:07:57,227 | INFO     | . log creation = 0 s
[2025-12-17 03:10:22] 2025-12-17 02:07:57,227 | INFO     | ..............................
[2025-12-17 03:10:22] 2025-12-17 02:07:57,532 | INFO     | 
[2025-12-17 03:10:22] 2025-12-17 02:07:57,532 | INFO     | job summary report
[2025-12-17 03:10:22] 2025-12-17 02:07:57,532 | INFO     | --------------------------------------------------
[2025-12-17 03:10:22] 2025-12-17 02:07:57,532 | INFO     | PanDA job id: 6929722337
[2025-12-17 03:10:22] 2025-12-17 02:07:57,532 | INFO     | task id: 47898763
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | errors: (none)
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | pilot state: finished 
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | transexitcode: 0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | exeerrorcode: 0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | exeerrordiag: 
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | exitcode: 0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | exitmsg: OK
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | cpuconsumptiontime: 58042 s
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | nevents: 400
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | neventsw: 0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | pid: 1843352
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | pgrp: 1843352
[2025-12-17 03:10:22] 2025-12-17 02:07:57,533 | INFO     | corecount: 4
[2025-12-17 03:10:22] 2025-12-17 02:07:57,534 | INFO     | event service: False
[2025-12-17 03:10:22] 2025-12-17 02:07:57,534 | INFO     | sizes: {0: 2283969, 5: 2284231, 11: 2284287, 15005: 2315363, 15006: 2324383, 15007: 2324439, 15015: 2324761}
[2025-12-17 03:10:22] 2025-12-17 02:07:57,534 | INFO     | --------------------------------------------------
[2025-12-17 03:10:22] 2025-12-17 02:07:57,534 | INFO     | 
[2025-12-17 03:10:22] 2025-12-17 02:07:57,534 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-12-17 03:10:22] 2025-12-17 02:07:57,554 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,555 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,555 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,555 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 03:10:22] 2025-12-17 02:07:57,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,556 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 03:10:22] 2025-12-17 02:07:57,557 | INFO     | job 6929722337 has completed (purged errors)
[2025-12-17 03:10:22] 2025-12-17 02:07:57,557 | INFO     | overall cleanup function is called
[2025-12-17 03:10:22] 2025-12-17 02:07:58,329 | INFO     | PID=1835263 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-17 03:10:22] 2025-12-17 02:07:58,330 | INFO     | .. there are 4 such processes running
[2025-12-17 03:10:22] 2025-12-17 02:07:58,562 | INFO     | --- collectZombieJob: --- 10, [1843352]
[2025-12-17 03:10:22] 2025-12-17 02:07:58,562 | INFO     | zombie collector waiting for pid 1843352
[2025-12-17 03:10:22] 2025-12-17 02:07:58,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 03:10:22] 2025-12-17 02:07:58,563 | INFO     | collected zombie processes
[2025-12-17 03:10:22] 2025-12-17 02:07:58,563 | INFO     | will attempt to kill all subprocesses of pid=1843352
[2025-12-17 03:10:22] 2025-12-17 02:07:58,908 | INFO     | process IDs to be killed: [1843352] (in reverse order)
[2025-12-17 03:10:22] 2025-12-17 02:07:59,015 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 03:10:22] 2025-12-17 02:07:59,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 03:10:22] 2025-12-17 02:07:59,028 | INFO     | did not find any defunct processes belonging to 1843352
[2025-12-17 03:10:22] 2025-12-17 02:07:59,042 | INFO     | did not find any defunct processes belonging to 1843352
[2025-12-17 03:10:22] 2025-12-17 02:07:59,043 | INFO     | ready for new job
[2025-12-17 03:10:22] 2025-12-17 02:07:59,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 03:10:22] 2025-12-17 02:07:59,046 | INFO     | ***************************************
[2025-12-17 03:10:22] 2025-12-17 02:07:59,046 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 03:10:22] 2025-12-17 02:07:59,046 | INFO     | ***************************************
[2025-12-17 03:10:22] 2025-12-17 02:07:59,046 | INFO     | 
[2025-12-17 03:10:22] 2025-12-17 02:07:59,050 | INFO     | architecture information:
[2025-12-17 03:10:22] 2025-12-17 02:07:59,050 | INFO     | executing command: cat /etc/os-release
[2025-12-17 03:10:22] 2025-12-17 02:07:59,066 | INFO     | cat /etc/os-release:
[2025-12-17 03:10:22] NAME="CentOS Linux"
[2025-12-17 03:10:22] VERSION="7 (Core)"
[2025-12-17 03:10:22] ID="centos"
[2025-12-17 03:10:22] ID_LIKE="rhel fedora"
[2025-12-17 03:10:22] VERSION_ID="7"
[2025-12-17 03:10:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 03:10:22] ANSI_COLOR="0;31"
[2025-12-17 03:10:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 03:10:22] HOME_URL="https://www.centos.org/"
[2025-12-17 03:10:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 03:10:22] 
[2025-12-17 03:10:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 03:10:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 03:10:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 03:10:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 03:10:22] 
[2025-12-17 03:10:22] 2025-12-17 02:07:59,067 | INFO     | ***************************************
[2025-12-17 03:10:22] 2025-12-17 02:07:59,570 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-12-17 03:10:22] 2025-12-17 02:07:59,585 | INFO     | sufficient remaining disk space (624656646144 B)
[2025-12-17 03:10:22] 2025-12-17 02:07:59,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 03:10:22] 2025-12-17 02:07:59,586 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 03:10:22] 2025-12-17 02:07:59,586 | INFO     | update_server=False
[2025-12-17 03:10:22] 2025-12-17 02:07:59,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 03:10:22] 2025-12-17 02:07:59,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 03:10:22] 2025-12-17 02:07:59,638 | INFO     | all job control threads have been joined
[2025-12-17 03:10:22] 2025-12-17 02:07:59,686 | INFO     | all payload control threads have been joined
[2025-12-17 03:10:22] 2025-12-17 02:07:59,978 | INFO     | all data control threads have been joined
[2025-12-17 03:10:22] 2025-12-17 02:08:00,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:10:22] 2025-12-17 02:08:00,075 | INFO     | aborting loop
[2025-12-17 03:10:22] 2025-12-17 02:08:00,587 | INFO     | [job] retrieve thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:00,643 | INFO     | [job] control thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:00,649 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:00,691 | INFO     | [payload] control thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:00,739 | INFO     | [data] copytool_in thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:00,851 | INFO     | [payload] failed_post thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:00,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 03:10:22] 2025-12-17 02:08:00,983 | INFO     | [data] control thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:01,076 | INFO     | [job] job monitor thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:01,147 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:01,973 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:01,991 | INFO     | [job] validate thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:02,139 | INFO     | [payload] validate_post thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:02,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:10:22] 2025-12-17 02:08:02,981 | INFO     | [data] copytool_out thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:03,345 | INFO     | [job] queue monitor thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:03,592 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:10,505 | INFO     | job.realtimelogging is not enabled
[2025-12-17 03:10:22] 2025-12-17 02:08:11,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 03:10:22] 2025-12-17 02:08:30,848 | INFO     | PID=1835263 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 03:10:22] 2025-12-17 02:08:30,849 | INFO     | .. there are 4 such processes running
[2025-12-17 03:10:22] 2025-12-17 02:08:30,850 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 03:10:22] 2025-12-17 02:08:30,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 03:10:22] 2025-12-17 02:08:30,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 03:10:22] 2025-12-17 02:08:50,287 | INFO     | [monitor] cgroup control has ended
[2025-12-17 03:10:22] 2025-12-17 02:08:51,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22464889714496)>', '<ExcThread(monitor, started 22464654448384)>']
[2025-12-17 03:10:22] 2025-12-17 02:08:51,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 03:10:22] 2025-12-17 02:08:51,925 | INFO     | [monitor] control thread has ended
[2025-12-17 03:10:22] 2025-12-17 02:08:56,302 | INFO     | all workflow threads have been joined
[2025-12-17 03:10:22] 2025-12-17 02:08:56,303 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 03:10:22] 2025-12-17 02:08:56,303 | INFO     | traces error code: 0
[2025-12-17 03:10:22] 2025-12-17 02:08:56,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 03:10:22] 2025-12-17 02:08:56,437 [wrapper] ==== pilot stdout END ====
[2025-12-17 03:10:22] 2025-12-17 02:08:56,440 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 03:10:22] 2025-12-17 02:08:56,442 [wrapper] pilotpid: 1835263
[2025-12-17 03:10:22] 2025-12-17 02:08:56,444 [wrapper] Pilot exit status: 0
[2025-12-17 03:10:22] 2025-12-17 02:08:56,453 [wrapper] pandaids: 6929722337
[2025-12-17 03:10:22] 2025-12-17 02:08:56,528 [wrapper] cleanup supervisor_pilot 2053772 1835264
[2025-12-17 03:10:22] 2025-12-17 02:08:56,531 [wrapper] Test setup, not cleaning
[2025-12-17 03:10:22] 2025-12-17 02:08:56,533 [wrapper] apfmon messages muted
[2025-12-17 03:10:22] 2025-12-17 02:08:56,535 [wrapper] ==== wrapper stdout END ====
[2025-12-17 03:10:22] 2025-12-17 02:08:56,538 [wrapper] ==== wrapper stderr END ====
[2025-12-17 03:10:22]  *** Error codes and diagnostics ***
[2025-12-17 03:10:22]     "exeErrorCode": 0,
[2025-12-17 03:10:22]     "exeErrorDiag": "",
[2025-12-17 03:10:22]     "pilotErrorCode": 0,
[2025-12-17 03:10:22]     "pilotErrorDiag": "",
[2025-12-17 03:10:22]  *** Listing of results directory ***
[2025-12-17 03:10:22] total 439176
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc    579449 Dec 15 14:27 pilot3.tar.gz
[2025-12-17 03:10:22] -rwx------ 1 boinc boinc     36322 Dec 15 14:30 runpilot2-wrapper.sh
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc      5112 Dec 15 14:33 queuedata.json
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc       100 Dec 16 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 03:10:22] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 22:57 run_atlas
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc       105 Dec 16 22:57 job.xml
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc      6638 Dec 16 22:57 init_data.xml
[2025-12-17 03:10:22] -rw-r--r-- 2 boinc boinc 222363377 Dec 16 22:57 EVNT.47898761._000655.pool.root.1
[2025-12-17 03:10:22] drwxrwx--x 2 boinc boinc      4096 Dec 16 22:57 shared
[2025-12-17 03:10:22] -rw-r--r-- 2 boinc boinc    592397 Dec 16 22:57 input.tar.gz
[2025-12-17 03:10:22] -rw-r--r-- 2 boinc boinc     15847 Dec 16 22:57 start_atlas.sh
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc         0 Dec 16 22:57 boinc_lockfile
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc      2508 Dec 16 22:57 pandaJob.out
[2025-12-17 03:10:22] -rw------- 1 boinc boinc    987401 Dec 16 22:57 agis_schedconf.cvmfs.json
[2025-12-17 03:10:22] drwx------ 5 boinc boinc      4096 Dec 16 22:57 pilot3
[2025-12-17 03:10:22] -rw------- 1 boinc boinc 218374473 Dec 17 03:07 HITS.47898763._016387.pool.root.1
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc       528 Dec 17 03:07 boinc_task_state.xml
[2025-12-17 03:10:22] -rw------- 1 boinc boinc      1035 Dec 17 03:07 memory_monitor_summary.json
[2025-12-17 03:10:22] -rw------- 1 boinc boinc   1516240 Dec 17 03:07 agis_ddmendpoints.agis.ALL.json
[2025-12-17 03:10:22] -rw------- 1 boinc boinc    412590 Dec 17 03:07 log.47898763._016387.job.log.tgz.1
[2025-12-17 03:10:22] -rw------- 1 boinc boinc      7830 Dec 17 03:07 heartbeat.json
[2025-12-17 03:10:22] -rw------- 1 boinc boinc        95 Dec 17 03:08 pilot_heartbeat.json
[2025-12-17 03:10:22] -rw------- 1 boinc boinc      4905 Dec 17 03:08 pilotlog.txt
[2025-12-17 03:10:22] -rw------- 1 boinc boinc   2120677 Dec 17 03:08 log.47898763._016387.job.log.1
[2025-12-17 03:10:22] -rw------- 1 boinc boinc       357 Dec 17 03:08 output.list
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc       620 Dec 17 03:08 runtime_log
[2025-12-17 03:10:22] -rw------- 1 boinc boinc   2549760 Dec 17 03:08 result.tar.gz
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc      9206 Dec 17 03:08 runtime_log.err
[2025-12-17 03:10:22] -rw------- 1 boinc boinc       665 Dec 17 03:08 SKBLDmbpNp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmk6XKDmu3mO5m.diag
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc        26 Dec 17 03:10 wrapper_checkpoint.txt
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc      8192 Dec 17 03:10 boinc_mmap_file
[2025-12-17 03:10:22] -rw-r--r-- 1 boinc boinc     21140 Dec 17 03:10 stderr.txt
[2025-12-17 03:10:22] HITS file was successfully produced:
[2025-12-17 03:10:22] -rw------- 1 boinc boinc 218374473 Dec 17 03:07 shared/HITS.pool.root.1
[2025-12-17 03:10:22]  *** Contents of shared directory: ***
[2025-12-17 03:10:22] total 433508
[2025-12-17 03:10:22] -rw-r--r-- 2 boinc boinc 222363377 Dec 16 22:57 ATLAS.root_0
[2025-12-17 03:10:22] -rw-r--r-- 2 boinc boinc    592397 Dec 16 22:57 input.tar.gz
[2025-12-17 03:10:22] -rw-r--r-- 2 boinc boinc     15847 Dec 16 22:57 start_atlas.sh
[2025-12-17 03:10:22] -rw------- 1 boinc boinc 218374473 Dec 17 03:07 HITS.pool.root.1
[2025-12-17 03:10:22] -rw------- 1 boinc boinc   2549760 Dec 17 03:08 result.tar.gz
03:10:24 (1831461): run_atlas exited; CPU time 58701.554930
03:10:24 (1831461): called boinc_finish(0)

</stderr_txt>
]]>

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