Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:20:54 (2355843): wrapper (7.7.26015): starting
20:20:54 (2355843): wrapper: running run_atlas (--nthreads 9)
[2025-12-15 20:20:54] Arguments: --nthreads 9
[2025-12-15 20:20:54] Threads: 9
[2025-12-15 20:20:54] Checking for CVMFS
[2025-12-15 20:20:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 20:20:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 20:20:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 20:20:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 20:20:54] 2.13.3.0 11285 58137 228920 154053 3 370 17749959 32935936 28895 16776704 0 420436316 99.538 511848380 36212 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-15 20:20:54] CVMFS is ok
[2025-12-15 20:20:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 20:20:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 20:20:54] Further information can be found at the LHC@home message board.
[2025-12-15 20:20:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 20:20:54] Checking for apptainer binary...
[2025-12-15 20:20:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 20:20:55] Running /usr/bin/apptainer --version
[2025-12-15 20:20:55] apptainer version 1.4.5-2.el9
[2025-12-15 20:20:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 20:20:55] c7-3-29.aglt2.org
[2025-12-15 20:20:55] apptainer works
[2025-12-15 20:20:55] Set ATHENA_PROC_NUMBER=9
[2025-12-15 20:20:55] Set ATHENA_CORE_NUMBER=9
[2025-12-15 20:20:55] Starting ATLAS job with PandaID=6929571780
[2025-12-15 20:20:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 23:47:43]  *** The last 200 lines of the pilot log: ***
[2025-12-15 23:47:43] 2025-12-16 04:46:32,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 23:47:43] 2025-12-16 04:46:32,863 | INFO     | time since job start (12318s) is within the limit (174528.0s)
[2025-12-15 23:47:43] 2025-12-16 04:46:34,874 | INFO     | time since job start (12320s) is within the limit (174528.0s)
[2025-12-15 23:47:43] 2025-12-16 04:46:35,272 | INFO     | monitor loop #760: job 0:6929571780 is in state 'finished'
[2025-12-15 23:47:43] 2025-12-16 04:46:35,272 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 23:47:43] 2025-12-16 04:46:36,881 | INFO     | time since job start (12322s) is within the limit (174528.0s)
[2025-12-15 23:47:43] 2025-12-16 04:46:37,776 | INFO     | monitor loop #761: job 0:6929571780 is in state 'finished'
[2025-12-15 23:47:43] 2025-12-16 04:46:37,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 23:47:43] 2025-12-16 04:46:38,544 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 23:47:43] 2025-12-16 04:46:38,550 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3000.527625000001
[2025-12-15 23:47:43] 2025-12-16 04:46:38,569 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929571780/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 23:47:43] 2025-12-16 04:46:38,570 | INFO     | extracted standard info from prmon json
[2025-12-15 23:47:43] 2025-12-16 04:46:38,570 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 23:47:43] 2025-12-16 04:46:38,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 23:47:43] 2025-12-16 04:46:38,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 23:47:43] 2025-12-16 04:46:38,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 23:47:43] 2025-12-16 04:46:38,597 | INFO     | fitting pss+swap vs Time
[2025-12-15 23:47:43] 2025-12-16 04:46:38,597 | INFO     | sum of square deviations: 2518096622.189047
[2025-12-15 23:47:43] 2025-12-16 04:46:38,598 | INFO     | sum of deviations: -21948212729.567154
[2025-12-15 23:47:43] 2025-12-16 04:46:38,604 | INFO     | mean x: 1765854215.1840796
[2025-12-15 23:47:43] 2025-12-16 04:46:38,604 | INFO     | mean y: 2589175.447761194
[2025-12-15 23:47:43] 2025-12-16 04:46:38,605 | INFO     | intersect: 15394112925.068722
[2025-12-15 23:47:43] 2025-12-16 04:46:38,605 | INFO     | chi2: 2.212280819924233
[2025-12-15 23:47:43] 2025-12-16 04:46:38,605 | INFO     | sum of square deviations: 2334830052.015304
[2025-12-15 23:47:43] 2025-12-16 04:46:38,630 | INFO     | sum of deviations: -20946732972.04592
[2025-12-15 23:47:43] 2025-12-16 04:46:38,631 | INFO     | mean x: 1765854062.6887755
[2025-12-15 23:47:43] 2025-12-16 04:46:38,631 | INFO     | mean y: 2590008.9336734693
[2025-12-15 23:47:43] 2025-12-16 04:46:38,631 | INFO     | intersect: 15844802373.305695
[2025-12-15 23:47:43] 2025-12-16 04:46:38,631 | INFO     | chi2: 2.2103686259282664
[2025-12-15 23:47:43] 2025-12-16 04:46:38,631 | INFO     | current chi2=2.2103686259282664 (change=0.0864354099509053 %)
[2025-12-15 23:47:43] 2025-12-16 04:46:38,631 | INFO     | right removable region: 195
[2025-12-15 23:47:43] 2025-12-16 04:46:38,631 | INFO     | sum of square deviations: 2334807482.015304
[2025-12-15 23:47:43] 2025-12-16 04:46:38,632 | INFO     | sum of deviations: -61073498489.209206
[2025-12-15 23:47:43] 2025-12-16 04:46:38,632 | INFO     | mean x: 1765854367.6887755
[2025-12-15 23:47:43] 2025-12-16 04:46:38,633 | INFO     | mean y: 2621417.586734694
[2025-12-15 23:47:43] 2025-12-16 04:46:38,633 | INFO     | intersect: 46193540749.4518
[2025-12-15 23:47:43] 2025-12-16 04:46:38,633 | INFO     | chi2: 0.2529784811944831
[2025-12-15 23:47:43] 2025-12-16 04:46:38,633 | INFO     | current chi2=0.2529784811944831 (change=88.56481153223815 %)
[2025-12-15 23:47:43] 2025-12-16 04:46:38,633 | INFO     | sum of square deviations: 2160634791.8324604
[2025-12-15 23:47:43] 2025-12-16 04:46:38,638 | INFO     | sum of deviations: -59214601943.7958
[2025-12-15 23:47:43] 2025-12-16 04:46:38,638 | INFO     | mean x: 1765854520.1937172
[2025-12-15 23:47:43] 2025-12-16 04:46:38,638 | INFO     | mean y: 2619738.670157068
[2025-12-15 23:47:43] 2025-12-16 04:46:38,638 | INFO     | intersect: 48397828822.21971
[2025-12-15 23:47:43] 2025-12-16 04:46:38,639 | INFO     | chi2: 0.23180446258145873
[2025-12-15 23:47:43] 2025-12-16 04:46:38,639 | INFO     | current chi2=0.23180446258145873 (change=8.3698892147061 %)
[2025-12-15 23:47:43] 2025-12-16 04:46:38,639 | INFO     | left removable region: 20
[2025-12-15 23:47:43] 2025-12-16 04:46:38,639 | INFO     | sum of square deviations: 1661874146.594286
[2025-12-15 23:47:43] 2025-12-16 04:46:38,640 | INFO     | sum of deviations: -39732987236.451416
[2025-12-15 23:47:43] 2025-12-16 04:46:38,640 | INFO     | mean x: 1765854642.2057142
[2025-12-15 23:47:43] 2025-12-16 04:46:38,640 | INFO     | mean y: 2604271.6514285714
[2025-12-15 23:47:43] 2025-12-16 04:46:38,640 | INFO     | intersect: 42221613517.31181
[2025-12-15 23:47:43] 2025-12-16 04:46:38,640 | INFO     | chi2: 0.18536137143334067
[2025-12-15 23:47:43] 2025-12-16 04:46:38,641 | INFO     | current memory leak: -23.91 B/s (using 175 data points, chi2=0.19)
[2025-12-15 23:47:43] 2025-12-16 04:46:38,641 | INFO     | could have reported an average CPU frequency of 3021 MHz (10 samples)
[2025-12-15 23:47:43] 2025-12-16 04:46:38,641 | INFO     | ..............................
[2025-12-15 23:47:43] 2025-12-16 04:46:38,641 | INFO     | . Timing measurements:
[2025-12-15 23:47:43] 2025-12-16 04:46:38,641 | INFO     | . get job = 0 s
[2025-12-15 23:47:43] 2025-12-16 04:46:38,641 | INFO     | . initial setup = 3 s
[2025-12-15 23:47:43] 2025-12-16 04:46:38,641 | INFO     | . payload setup = 12 s
[2025-12-15 23:47:43] 2025-12-16 04:46:38,641 | INFO     | . stage-in = 0 s
[2025-12-15 23:47:43] 2025-12-16 04:46:38,642 | INFO     | . payload execution = 12260 s
[2025-12-15 23:47:43] 2025-12-16 04:46:38,642 | INFO     | . stage-out = 5 s
[2025-12-15 23:47:43] 2025-12-16 04:46:38,642 | INFO     | . log creation = 0 s
[2025-12-15 23:47:43] 2025-12-16 04:46:38,642 | INFO     | ..............................
[2025-12-15 23:47:43] 2025-12-16 04:46:38,900 | INFO     | time since job start (12324s) is within the limit (174528.0s)
[2025-12-15 23:47:43] 2025-12-16 04:46:39,054 | INFO     | 
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | job summary report
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | --------------------------------------------------
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | PanDA job id: 6929571780
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | task id: 47898763
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | errors: (none)
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | pilot state: finished 
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | transexitcode: 0
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | exeerrorcode: 0
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | exeerrordiag: 
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | exitcode: 0
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | exitmsg: OK
[2025-12-15 23:47:43] 2025-12-16 04:46:39,055 | INFO     | cpuconsumptiontime: 49245 s
[2025-12-15 23:47:43] 2025-12-16 04:46:39,056 | INFO     | nevents: 400
[2025-12-15 23:47:43] 2025-12-16 04:46:39,056 | INFO     | neventsw: 0
[2025-12-15 23:47:43] 2025-12-16 04:46:39,056 | INFO     | pid: 2366201
[2025-12-15 23:47:43] 2025-12-16 04:46:39,056 | INFO     | pgrp: 2366201
[2025-12-15 23:47:43] 2025-12-16 04:46:39,056 | INFO     | corecount: 9
[2025-12-15 23:47:43] 2025-12-16 04:46:39,056 | INFO     | event service: False
[2025-12-15 23:47:43] 2025-12-16 04:46:39,056 | INFO     | sizes: {0: 2283959, 8: 2284221, 11: 2284249, 12278: 2314035, 12279: 2314034, 12286: 2323088, 12287: 2323272, 12306: 2323466}
[2025-12-15 23:47:43] 2025-12-16 04:46:39,056 | INFO     | --------------------------------------------------
[2025-12-15 23:47:43] 2025-12-16 04:46:39,056 | INFO     | 
[2025-12-15 23:47:43] 2025-12-16 04:46:39,056 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 23:47:43] 2025-12-16 04:46:39,122 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,124 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 23:47:43] 2025-12-16 04:46:39,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,124 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 23:47:43] 2025-12-16 04:46:39,125 | INFO     | job 6929571780 has completed (purged errors)
[2025-12-15 23:47:43] 2025-12-16 04:46:39,125 | INFO     | overall cleanup function is called
[2025-12-15 23:47:43] 2025-12-16 04:46:40,143 | INFO     | --- collectZombieJob: --- 10, [2366201]
[2025-12-15 23:47:43] 2025-12-16 04:46:40,143 | INFO     | zombie collector waiting for pid 2366201
[2025-12-15 23:47:43] 2025-12-16 04:46:40,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 23:47:43] 2025-12-16 04:46:40,144 | INFO     | collected zombie processes
[2025-12-15 23:47:43] 2025-12-16 04:46:40,144 | INFO     | will attempt to kill all subprocesses of pid=2366201
[2025-12-15 23:47:43] 2025-12-16 04:46:42,305 | INFO     | process IDs to be killed: [2366201] (in reverse order)
[2025-12-15 23:47:43] 2025-12-16 04:46:42,592 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 23:47:43] 2025-12-16 04:46:42,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 23:47:43] 2025-12-16 04:46:42,621 | INFO     | did not find any defunct processes belonging to 2366201
[2025-12-15 23:47:43] 2025-12-16 04:46:42,647 | INFO     | did not find any defunct processes belonging to 2366201
[2025-12-15 23:47:43] 2025-12-16 04:46:42,647 | INFO     | ready for new job
[2025-12-15 23:47:43] 2025-12-16 04:46:42,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 23:47:43] 2025-12-16 04:46:42,650 | INFO     | ***************************************
[2025-12-15 23:47:43] 2025-12-16 04:46:42,675 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 23:47:43] 2025-12-16 04:46:42,675 | INFO     | ***************************************
[2025-12-15 23:47:43] 2025-12-16 04:46:42,676 | INFO     | 
[2025-12-15 23:47:43] 2025-12-16 04:46:42,700 | INFO     | architecture information:
[2025-12-15 23:47:43] 2025-12-16 04:46:42,725 | INFO     | executing command: cat /etc/os-release
[2025-12-15 23:47:43] 2025-12-16 04:46:42,820 | INFO     | cat /etc/os-release:
[2025-12-15 23:47:43] NAME="CentOS Linux"
[2025-12-15 23:47:43] VERSION="7 (Core)"
[2025-12-15 23:47:43] ID="centos"
[2025-12-15 23:47:43] ID_LIKE="rhel fedora"
[2025-12-15 23:47:43] VERSION_ID="7"
[2025-12-15 23:47:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 23:47:43] ANSI_COLOR="0;31"
[2025-12-15 23:47:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 23:47:43] HOME_URL="https://www.centos.org/"
[2025-12-15 23:47:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 23:47:43] 
[2025-12-15 23:47:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 23:47:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 23:47:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 23:47:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 23:47:43] 
[2025-12-15 23:47:43] 2025-12-16 04:46:42,821 | INFO     | ***************************************
[2025-12-15 23:47:43] 2025-12-16 04:46:43,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 23:47:43] 2025-12-16 04:46:43,382 | INFO     | sufficient remaining disk space (74493984768 B)
[2025-12-15 23:47:43] 2025-12-16 04:46:43,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 23:47:43] 2025-12-16 04:46:43,384 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 23:47:43] 2025-12-16 04:46:43,385 | INFO     | update_server=False
[2025-12-15 23:47:43] 2025-12-16 04:46:43,385 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 23:47:43] 2025-12-16 04:46:43,500 | INFO     | all payload control threads have been joined
[2025-12-15 23:47:43] 2025-12-16 04:46:43,800 | INFO     | all data control threads have been joined
[2025-12-15 23:47:43] 2025-12-16 04:46:43,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 23:47:43] 2025-12-16 04:46:43,840 | INFO     | aborting loop
[2025-12-15 23:47:43] 2025-12-16 04:46:43,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 23:47:43] 2025-12-16 04:46:44,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 23:47:43] 2025-12-16 04:46:44,391 | INFO     | [job] retrieve thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:44,506 | INFO     | [payload] control thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:44,587 | INFO     | [data] copytool_in thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:44,591 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:44,608 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:44,622 | INFO     | all job control threads have been joined
[2025-12-15 23:47:43] 2025-12-16 04:46:44,806 | INFO     | [data] control thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:44,856 | INFO     | [job] job monitor thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:44,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 23:47:43] 2025-12-16 04:46:44,960 | INFO     | [payload] failed_post thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:45,098 | INFO     | [job] queue monitor thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:45,265 | INFO     | [payload] validate_post thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:45,369 | INFO     | [job] validate thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:45,612 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:45,630 | INFO     | [job] control thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:45,636 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:46,889 | INFO     | [data] copytool_out thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:46:47,851 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 23:47:43] 2025-12-16 04:47:15,039 | INFO     | PID=2359615 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 23:47:43] 2025-12-16 04:47:15,039 | INFO     | .. there are 31 such processes running
[2025-12-15 23:47:43] 2025-12-16 04:47:15,039 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 23:47:43] 2025-12-16 04:47:15,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 23:47:43] 2025-12-16 04:47:15,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 23:47:43] 2025-12-16 04:47:35,376 | INFO     | [monitor] cgroup control has ended
[2025-12-15 23:47:43] 2025-12-16 04:47:37,206 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175846713152)>', '<ExcThread(monitor, started 140175334151936)>']
[2025-12-15 23:47:43] 2025-12-16 04:47:37,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 23:47:43] 2025-12-16 04:47:37,267 | INFO     | [monitor] control thread has ended
[2025-12-15 23:47:43] 2025-12-16 04:47:42,235 | INFO     | all workflow threads have been joined
[2025-12-15 23:47:43] 2025-12-16 04:47:42,235 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 23:47:43] 2025-12-16 04:47:42,236 | INFO     | traces error code: 0
[2025-12-15 23:47:43] 2025-12-16 04:47:42,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 23:47:43] 2025-12-16 04:47:43,065 [wrapper] ==== pilot stdout END ====
[2025-12-15 23:47:43] 2025-12-16 04:47:43,122 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 23:47:43] 2025-12-16 04:47:43,154 [wrapper] pilotpid: 2359615
[2025-12-15 23:47:43] 2025-12-16 04:47:43,183 [wrapper] Pilot exit status: 0
[2025-12-15 23:47:43] 2025-12-16 04:47:43,259 [wrapper] pandaids: 6929571780
[2025-12-15 23:47:43] 2025-12-16 04:47:43,371 [wrapper] cleanup supervisor_pilot 2985028 2359616
[2025-12-15 23:47:43] 2025-12-16 04:47:43,374 [wrapper] Test setup, not cleaning
[2025-12-15 23:47:43] 2025-12-16 04:47:43,376 [wrapper] apfmon messages muted
[2025-12-15 23:47:43] 2025-12-16 04:47:43,378 [wrapper] ==== wrapper stdout END ====
[2025-12-15 23:47:43] 2025-12-16 04:47:43,380 [wrapper] ==== wrapper stderr END ====
[2025-12-15 23:47:43]  *** Error codes and diagnostics ***
[2025-12-15 23:47:43]     "exeErrorCode": 0,
[2025-12-15 23:47:43]     "exeErrorDiag": "",
[2025-12-15 23:47:43]     "pilotErrorCode": 0,
[2025-12-15 23:47:43]     "pilotErrorDiag": "",
[2025-12-15 23:47:43]  *** Listing of results directory ***
[2025-12-15 23:47:43] total 442744
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 03:08 pilot3.tar.gz
[2025-12-15 23:47:43] -rwx------. 1 boincer umatlas     36322 Dec 15 03:10 runpilot2-wrapper.sh
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 03:11 queuedata.json
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas       100 Dec 15 20:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 23:47:43] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 20:20 run_atlas
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas       105 Dec 15 20:20 job.xml
[2025-12-15 23:47:43] -rw-r--r--. 2 boincer umatlas 222115384 Dec 15 20:20 EVNT.47898761._000571.pool.root.1
[2025-12-15 23:47:43] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 20:20 start_atlas.sh
[2025-12-15 23:47:43] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 20:20 shared
[2025-12-15 23:47:43] -rw-r--r--. 2 boincer umatlas    592399 Dec 15 20:20 input.tar.gz
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas         0 Dec 15 20:20 boinc_lockfile
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas      2509 Dec 15 20:20 pandaJob.out
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas        57 Dec 15 20:20 setup.sh.local
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas    994531 Dec 15 20:21 agis_schedconf.cvmfs.json
[2025-12-15 23:47:43] drwx------. 5 boincer umatlas      4096 Dec 15 20:21 pilot3
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas      6946 Dec 15 23:40 init_data.xml
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas 223290219 Dec 15 23:45 HITS.47898763._015150.pool.root.1
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas       531 Dec 15 23:45 boinc_task_state.xml
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas      1034 Dec 15 23:46 memory_monitor_summary.json
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas   1516240 Dec 15 23:46 agis_ddmendpoints.agis.ALL.json
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas    435724 Dec 15 23:46 log.47898763._015150.job.log.tgz.1
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas        95 Dec 15 23:46 pilot_heartbeat.json
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas      7782 Dec 15 23:46 heartbeat.json
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas      4824 Dec 15 23:47 pilotlog.txt
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas        28 Dec 15 23:47 wrapper_checkpoint.txt
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 23:47 boinc_mmap_file
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas   1583566 Dec 15 23:47 log.47898763._015150.job.log.1
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas       357 Dec 15 23:47 output.list
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas       620 Dec 15 23:47 runtime_log
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas   2037760 Dec 15 23:47 result.tar.gz
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas       656 Dec 15 23:47 SB5LDm4pIp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmW8SKDmNPdiIm.diag
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas      9338 Dec 15 23:47 runtime_log.err
[2025-12-15 23:47:43] -rw-r--r--. 1 boincer umatlas     21421 Dec 15 23:47 stderr.txt
[2025-12-15 23:47:43] HITS file was successfully produced:
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas 223290219 Dec 15 23:45 shared/HITS.pool.root.1
[2025-12-15 23:47:43]  *** Contents of shared directory: ***
[2025-12-15 23:47:43] total 437568
[2025-12-15 23:47:43] -rw-r--r--. 2 boincer umatlas 222115384 Dec 15 20:20 ATLAS.root_0
[2025-12-15 23:47:43] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 20:20 start_atlas.sh
[2025-12-15 23:47:43] -rw-r--r--. 2 boincer umatlas    592399 Dec 15 20:20 input.tar.gz
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas 223290219 Dec 15 23:45 HITS.pool.root.1
[2025-12-15 23:47:43] -rw-------. 1 boincer umatlas   2037760 Dec 15 23:47 result.tar.gz
23:47:45 (2355843): run_atlas exited; CPU time 49757.967914
23:47:45 (2355843): called boinc_finish(0)

</stderr_txt>
]]>

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