Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:51:19 (25643): wrapper (7.7.26015): starting
06:51:19 (25643): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 06:51:19] Arguments: --nthreads 8
[2025-12-16 06:51:19] Threads: 8
[2025-12-16 06:51:19] Checking for CVMFS
[2025-12-16 06:51:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 06:51:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 06:51:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 06:51:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 06:51:21] 2.11.2.0 2518 457 62764 154060 0 268 24599365 25165824 4699 130560 0 531716 99.812 209818 1341 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-16 06:51:21] CVMFS is ok
[2025-12-16 06:51:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 06:51:21] Checking for apptainer binary...
[2025-12-16 06:51:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 06:51:21] Running /usr/bin/apptainer --version
[2025-12-16 06:51:21] apptainer version 1.3.2-1.el7
[2025-12-16 06:51:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 06:51:41] cg-vwn419.simple-grid.lan
[2025-12-16 06:51:41] apptainer works
[2025-12-16 06:51:41] Set ATHENA_PROC_NUMBER=8
[2025-12-16 06:51:41] Set ATHENA_CORE_NUMBER=8
[2025-12-16 06:51:41] Starting ATLAS job with PandaID=6929808764
[2025-12-16 06:51:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 12:49:55]  *** The last 200 lines of the pilot log: ***
[2025-12-16 12:49:55] 2025-12-16 11:49:04,021 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 12:49:55] 2025-12-16 11:49:04,022 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-16 12:49:55] 2025-12-16 11:49:04,024 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6929808764/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 12:49:55] 2025-12-16 11:49:04,024 | INFO     | extracted standard info from prmon json
[2025-12-16 12:49:55] 2025-12-16 11:49:04,025 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 12:49:55] 2025-12-16 11:49:04,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 12:49:55] 2025-12-16 11:49:04,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 12:49:55] 2025-12-16 11:49:04,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 12:49:55] 2025-12-16 11:49:04,035 | INFO     | fitting pss+swap vs Time
[2025-12-16 12:49:55] 2025-12-16 11:49:04,036 | INFO     | sum of square deviations: 12187409905.0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,040 | INFO     | sum of deviations: 118586067899.99991
[2025-12-16 12:49:55] 2025-12-16 11:49:04,040 | INFO     | mean x: 1765875303.5
[2025-12-16 12:49:55] 2025-12-16 11:49:04,040 | INFO     | mean y: 2447045.3529411764
[2025-12-16 12:49:55] 2025-12-16 11:49:04,041 | INFO     | intersect: -17179891964.831024
[2025-12-16 12:49:55] 2025-12-16 11:49:04,041 | INFO     | chi2: 6.487247468870731
[2025-12-16 12:49:55] 2025-12-16 11:49:04,042 | INFO     | sum of square deviations: 11657595320.0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,045 | INFO     | sum of deviations: 165745615152.0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,051 | INFO     | mean x: 1765875151.0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,051 | INFO     | mean y: 2460491.223880597
[2025-12-16 12:49:55] 2025-12-16 11:49:04,051 | INFO     | intersect: -25104438071.465797
[2025-12-16 12:49:55] 2025-12-16 11:49:04,052 | INFO     | chi2: 4.67643864743232
[2025-12-16 12:49:55] 2025-12-16 11:49:04,052 | INFO     | current chi2=4.67643864743232 (change=27.913361254178078 %)
[2025-12-16 12:49:55] 2025-12-16 11:49:04,052 | INFO     | sum of square deviations: 11143362422.5
[2025-12-16 12:49:55] 2025-12-16 11:49:04,056 | INFO     | sum of deviations: 162912488238.5
[2025-12-16 12:49:55] 2025-12-16 11:49:04,056 | INFO     | mean x: 1765874998.5
[2025-12-16 12:49:55] 2025-12-16 11:49:04,056 | INFO     | mean y: 2459650.978787879
[2025-12-16 12:49:55] 2025-12-16 11:49:04,056 | INFO     | intersect: -25814082880.46758
[2025-12-16 12:49:55] 2025-12-16 11:49:04,057 | INFO     | chi2: 4.679014018359297
[2025-12-16 12:49:55] 2025-12-16 11:49:04,057 | INFO     | current chi2=4.679014018359297 (change=-0.055071200995879914 %)
[2025-12-16 12:49:55] 2025-12-16 11:49:04,057 | INFO     | right removable region: 329
[2025-12-16 12:49:55] 2025-12-16 11:49:04,058 | INFO     | sum of square deviations: 11657595320.0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,076 | INFO     | sum of deviations: 5642656891.999996
[2025-12-16 12:49:55] 2025-12-16 11:49:04,076 | INFO     | mean x: 1765875456.0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,076 | INFO     | mean y: 2479518.1611940297
[2025-12-16 12:49:55] 2025-12-16 11:49:04,077 | INFO     | intersect: -852261879.0733804
[2025-12-16 12:49:55] 2025-12-16 11:49:04,077 | INFO     | chi2: 2.2931604992173815
[2025-12-16 12:49:55] 2025-12-16 11:49:04,077 | INFO     | current chi2=2.2931604992173815 (change=64.65125601850112 %)
[2025-12-16 12:49:55] 2025-12-16 11:49:04,078 | INFO     | sum of square deviations: 11143362422.5
[2025-12-16 12:49:55] 2025-12-16 11:49:04,081 | INFO     | sum of deviations: -19856666472.499996
[2025-12-16 12:49:55] 2025-12-16 11:49:04,081 | INFO     | mean x: 1765875608.5
[2025-12-16 12:49:55] 2025-12-16 11:49:04,082 | INFO     | mean y: 2487025.803030303
[2025-12-16 12:49:55] 2025-12-16 11:49:04,082 | INFO     | intersect: 3149149734.9964037
[2025-12-16 12:49:55] 2025-12-16 11:49:04,082 | INFO     | chi2: 1.917088972692204
[2025-12-16 12:49:55] 2025-12-16 11:49:04,082 | INFO     | current chi2=1.917088972692204 (change=16.399703668954903 %)
[2025-12-16 12:49:55] 2025-12-16 11:49:04,083 | INFO     | left removable region: 20
[2025-12-16 12:49:55] 2025-12-16 11:49:04,083 | INFO     | sum of square deviations: 9148487810.0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,086 | INFO     | sum of deviations: 21755341157.0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,087 | INFO     | mean x: 1765875578.0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,087 | INFO     | mean y: 2503009.226537217
[2025-12-16 12:49:55] 2025-12-16 11:49:04,087 | INFO     | intersect: -4196794889.843906
[2025-12-16 12:49:55] 2025-12-16 11:49:04,088 | INFO     | chi2: 0.0021424890526597785
[2025-12-16 12:49:55] 2025-12-16 11:49:04,088 | INFO     | current memory leak: 2.38 B/s (using 309 data points, chi2=0.00)
[2025-12-16 12:49:55] 2025-12-16 11:49:04,088 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-16 12:49:55] 2025-12-16 11:49:04,089 | INFO     | ..............................
[2025-12-16 12:49:55] 2025-12-16 11:49:04,089 | INFO     | . Timing measurements:
[2025-12-16 12:49:55] 2025-12-16 11:49:04,089 | INFO     | . get job = 0 s
[2025-12-16 12:49:55] 2025-12-16 11:49:04,089 | INFO     | . initial setup = 5 s
[2025-12-16 12:49:55] 2025-12-16 11:49:04,089 | INFO     | . payload setup = 128 s
[2025-12-16 12:49:55] 2025-12-16 11:49:04,089 | INFO     | . stage-in = 0 s
[2025-12-16 12:49:55] 2025-12-16 11:49:04,089 | INFO     | . payload execution = 20832 s
[2025-12-16 12:49:55] 2025-12-16 11:49:04,089 | INFO     | . stage-out = 3 s
[2025-12-16 12:49:55] 2025-12-16 11:49:04,090 | INFO     | . log creation = 1 s
[2025-12-16 12:49:55] 2025-12-16 11:49:04,090 | INFO     | ..............................
[2025-12-16 12:49:55] 2025-12-16 11:49:04,602 | INFO     | time since job start (21236s) is within the limit (174528.0s)
[2025-12-16 12:49:55] 2025-12-16 11:49:04,644 | INFO     | 
[2025-12-16 12:49:55] 2025-12-16 11:49:04,644 | INFO     | job summary report
[2025-12-16 12:49:55] 2025-12-16 11:49:04,644 | INFO     | --------------------------------------------------
[2025-12-16 12:49:55] 2025-12-16 11:49:04,644 | INFO     | PanDA job id: 6929808764
[2025-12-16 12:49:55] 2025-12-16 11:49:04,644 | INFO     | task id: 47898826
[2025-12-16 12:49:55] 2025-12-16 11:49:04,644 | INFO     | errors: (none)
[2025-12-16 12:49:55] 2025-12-16 11:49:04,644 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 12:49:55] 2025-12-16 11:49:04,644 | INFO     | pilot state: finished 
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | transexitcode: 0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | exeerrorcode: 0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | exeerrordiag: 
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | exitcode: 0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | exitmsg: OK
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | cpuconsumptiontime: 80187 s
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | nevents: 400
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | neventsw: 0
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | pid: 3992
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | pgrp: 3992
[2025-12-16 12:49:55] 2025-12-16 11:49:04,645 | INFO     | corecount: 8
[2025-12-16 12:49:55] 2025-12-16 11:49:04,646 | INFO     | event service: False
[2025-12-16 12:49:55] 2025-12-16 11:49:04,646 | INFO     | sizes: {0: 2283735, 1: 2283990, 2: 2283990, 12: 2284018, 23: 2284046, 34: 2284074, 44: 2284230, 55: 2284258, 66: 2284286, 77: 2284314, 79: 2284632, 87: 2284968, 20
[2025-12-16 12:49:55] 2025-12-16 11:49:04,646 | INFO     | --------------------------------------------------
[2025-12-16 12:49:55] 2025-12-16 11:49:04,646 | INFO     | 
[2025-12-16 12:49:55] 2025-12-16 11:49:04,646 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-12-16 12:49:55] 2025-12-16 11:49:05,031 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,031 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,032 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,032 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,032 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,032 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,032 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,032 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,032 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,032 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,032 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,032 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,033 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 12:49:55] 2025-12-16 11:49:05,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,033 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 12:49:55] 2025-12-16 11:49:05,033 | INFO     | job 6929808764 has completed (purged errors)
[2025-12-16 12:49:55] 2025-12-16 11:49:05,034 | INFO     | overall cleanup function is called
[2025-12-16 12:49:55] 2025-12-16 11:49:06,046 | INFO     | --- collectZombieJob: --- 10, [3992]
[2025-12-16 12:49:55] 2025-12-16 11:49:06,046 | INFO     | zombie collector waiting for pid 3992
[2025-12-16 12:49:55] 2025-12-16 11:49:06,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 12:49:55] 2025-12-16 11:49:06,046 | INFO     | collected zombie processes
[2025-12-16 12:49:55] 2025-12-16 11:49:06,046 | INFO     | will attempt to kill all subprocesses of pid=3992
[2025-12-16 12:49:55] 2025-12-16 11:49:06,178 | INFO     | process IDs to be killed: [3992] (in reverse order)
[2025-12-16 12:49:55] 2025-12-16 11:49:06,850 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 12:49:55] 2025-12-16 11:49:06,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 12:49:55] 2025-12-16 11:49:06,859 | INFO     | did not find any defunct processes belonging to 3992
[2025-12-16 12:49:55] 2025-12-16 11:49:06,862 | INFO     | did not find any defunct processes belonging to 3992
[2025-12-16 12:49:55] 2025-12-16 11:49:06,863 | INFO     | ready for new job
[2025-12-16 12:49:55] 2025-12-16 11:49:06,863 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 12:49:55] 2025-12-16 11:49:06,865 | INFO     | ***************************************
[2025-12-16 12:49:55] 2025-12-16 11:49:06,865 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 12:49:55] 2025-12-16 11:49:06,865 | INFO     | ***************************************
[2025-12-16 12:49:55] 2025-12-16 11:49:06,865 | INFO     | 
[2025-12-16 12:49:55] 2025-12-16 11:49:06,866 | INFO     | pilot is running in a VM
[2025-12-16 12:49:55] 2025-12-16 11:49:06,866 | INFO     | architecture information:
[2025-12-16 12:49:55] 2025-12-16 11:49:06,882 | INFO     | executing command: cat /etc/os-release
[2025-12-16 12:49:55] 2025-12-16 11:49:07,105 | INFO     | cat /etc/os-release:
[2025-12-16 12:49:55] NAME="CentOS Linux"
[2025-12-16 12:49:55] VERSION="7 (Core)"
[2025-12-16 12:49:55] ID="centos"
[2025-12-16 12:49:55] ID_LIKE="rhel fedora"
[2025-12-16 12:49:55] VERSION_ID="7"
[2025-12-16 12:49:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 12:49:55] ANSI_COLOR="0;31"
[2025-12-16 12:49:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 12:49:55] HOME_URL="https://www.centos.org/"
[2025-12-16 12:49:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 12:49:55] 
[2025-12-16 12:49:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 12:49:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 12:49:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 12:49:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 12:49:55] 
[2025-12-16 12:49:55] 2025-12-16 11:49:07,106 | INFO     | ***************************************
[2025-12-16 12:49:55] 2025-12-16 11:49:07,612 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-12-16 12:49:55] 2025-12-16 11:49:07,825 | INFO     | sufficient remaining disk space (494745419776 B)
[2025-12-16 12:49:55] 2025-12-16 11:49:07,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 12:49:55] 2025-12-16 11:49:07,826 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 12:49:55] 2025-12-16 11:49:07,826 | INFO     | update_server=False
[2025-12-16 12:49:55] 2025-12-16 11:49:07,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 12:49:55] 2025-12-16 11:49:07,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 12:49:55] 2025-12-16 11:49:07,827 | INFO     | aborting loop
[2025-12-16 12:49:55] 2025-12-16 11:49:08,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 12:49:55] 2025-12-16 11:49:08,567 | INFO     | all data control threads have been joined
[2025-12-16 12:49:55] 2025-12-16 11:49:08,593 | INFO     | all payload control threads have been joined
[2025-12-16 12:49:55] 2025-12-16 11:49:08,832 | INFO     | [job] retrieve thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:08,833 | INFO     | [job] job monitor thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:08,930 | INFO     | [data] copytool_in thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:09,056 | INFO     | [payload] failed_post thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:09,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 12:49:55] 2025-12-16 11:49:09,149 | INFO     | [payload] validate_post thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:09,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 12:49:55] 2025-12-16 11:49:09,255 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:09,259 | INFO     | [job] validate thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:09,384 | INFO     | all job control threads have been joined
[2025-12-16 12:49:55] 2025-12-16 11:49:09,573 | INFO     | [data] control thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:09,599 | INFO     | [payload] control thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:10,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:10,146 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:10,159 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:10,255 | INFO     | [job] queue monitor thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:10,390 | INFO     | [job] control thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:10,549 | INFO     | [data] copytool_out thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:13,089 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 12:49:55] 2025-12-16 11:49:37,842 | INFO     | PID=29733 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 12:49:55] 2025-12-16 11:49:37,842 | INFO     | .. there are 9 such processes running
[2025-12-16 12:49:55] 2025-12-16 11:49:37,843 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 12:49:55] 2025-12-16 11:49:37,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 12:49:55] 2025-12-16 11:49:37,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 12:49:55] 2025-12-16 11:49:44,227 | INFO     | [monitor] cgroup control has ended
[2025-12-16 12:49:55] 2025-12-16 11:49:45,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140598102525760)>', '<ExcThread(monitor, started 140597792843520)>']
[2025-12-16 12:49:55] 2025-12-16 11:49:45,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 12:49:55] 2025-12-16 11:49:45,893 | INFO     | [monitor] control thread has ended
[2025-12-16 12:49:55] 2025-12-16 11:49:50,133 | INFO     | all workflow threads have been joined
[2025-12-16 12:49:55] 2025-12-16 11:49:50,133 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 12:49:55] 2025-12-16 11:49:50,133 | INFO     | traces error code: 0
[2025-12-16 12:49:55] 2025-12-16 11:49:50,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 12:49:55] 2025-12-16 11:49:50,498 [wrapper] ==== pilot stdout END ====
[2025-12-16 12:49:55] 2025-12-16 11:49:50,602 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 12:49:55] 2025-12-16 11:49:50,707 [wrapper] pilotpid: 29733
[2025-12-16 12:49:55] 2025-12-16 11:49:50,787 [wrapper] Pilot exit status: 0
[2025-12-16 12:49:55] 2025-12-16 11:49:51,156 [wrapper] pandaids: 6929808764
[2025-12-16 12:49:55] 2025-12-16 11:49:52,001 [wrapper] cleanup supervisor_pilot  6671 29734
[2025-12-16 12:49:55] 2025-12-16 11:49:52,070 [wrapper] Test setup, not cleaning
[2025-12-16 12:49:55] 2025-12-16 11:49:52,142 [wrapper] apfmon messages muted
[2025-12-16 12:49:55] 2025-12-16 11:49:52,239 [wrapper] ==== wrapper stdout END ====
[2025-12-16 12:49:55] 2025-12-16 11:49:52,338 [wrapper] ==== wrapper stderr END ====
[2025-12-16 12:49:55]  *** Error codes and diagnostics ***
[2025-12-16 12:49:55]     "exeErrorCode": 0,
[2025-12-16 12:49:55]     "exeErrorDiag": "",
[2025-12-16 12:49:55]     "pilotErrorCode": 0,
[2025-12-16 12:49:55]     "pilotErrorDiag": "",
[2025-12-16 12:49:55]  *** Listing of results directory ***
[2025-12-16 12:49:55] total 442168
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc    579449 Dec 15 19:24 pilot3.tar.gz
[2025-12-16 12:49:55] -rwx------. 1 boinc boinc     36322 Dec 15 19:28 runpilot2-wrapper.sh
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc      5112 Dec 15 19:31 queuedata.json
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc       100 Dec 16 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 12:49:55] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 06:51 run_atlas
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc       105 Dec 16 06:51 job.xml
[2025-12-16 12:49:55] -rw-r--r--. 2 boinc boinc 224488334 Dec 16 06:51 EVNT.47898824._000100.pool.root.1
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc      6392 Dec 16 06:51 init_data.xml
[2025-12-16 12:49:55] -rw-r--r--. 2 boinc boinc     15847 Dec 16 06:51 start_atlas.sh
[2025-12-16 12:49:55] drwxrwx--x. 2 boinc boinc        68 Dec 16 06:51 shared
[2025-12-16 12:49:55] -rw-r--r--. 2 boinc boinc    592385 Dec 16 06:51 input.tar.gz
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc         0 Dec 16 06:51 boinc_lockfile
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc      2514 Dec 16 06:51 pandaJob.out
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc    994531 Dec 16 06:55 agis_schedconf.cvmfs.json
[2025-12-16 12:49:55] drwx------. 5 boinc boinc      4096 Dec 16 06:55 pilot3
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc 217605933 Dec 16 12:46 HITS.47898826._002548.pool.root.1
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc       531 Dec 16 12:46 boinc_task_state.xml
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc      1014 Dec 16 12:47 memory_monitor_summary.json
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc   1516240 Dec 16 12:47 agis_ddmendpoints.agis.ALL.json
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc    559128 Dec 16 12:47 log.47898826._002548.job.log.tgz.1
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc      7774 Dec 16 12:49 heartbeat.json
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc        95 Dec 16 12:49 pilot_heartbeat.json
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc      8192 Dec 16 12:49 boinc_mmap_file
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc        28 Dec 16 12:49 wrapper_checkpoint.txt
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc      4885 Dec 16 12:49 pilotlog.txt
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc   2830337 Dec 16 12:49 log.47898826._002548.job.log.1
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc       357 Dec 16 12:49 output.list
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc       620 Dec 16 12:49 runtime_log
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc   3409920 Dec 16 12:49 result.tar.gz
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc      8833 Dec 16 12:49 runtime_log.err
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc       658 Dec 16 12:49 dG7LDmFUSp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmubYKDmDQkdZn.diag
[2025-12-16 12:49:55] -rw-r--r--. 1 boinc boinc     20767 Dec 16 12:49 stderr.txt
[2025-12-16 12:49:55] HITS file was successfully produced:
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc 217605933 Dec 16 12:46 shared/HITS.pool.root.1
[2025-12-16 12:49:55]  *** Contents of shared directory: ***
[2025-12-16 12:49:55] total 435664
[2025-12-16 12:49:55] -rw-r--r--. 2 boinc boinc 224488334 Dec 16 06:51 ATLAS.root_0
[2025-12-16 12:49:55] -rw-r--r--. 2 boinc boinc     15847 Dec 16 06:51 start_atlas.sh
[2025-12-16 12:49:55] -rw-r--r--. 2 boinc boinc    592385 Dec 16 06:51 input.tar.gz
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc 217605933 Dec 16 12:46 HITS.pool.root.1
[2025-12-16 12:49:55] -rw-------. 1 boinc boinc   3409920 Dec 16 12:49 result.tar.gz
12:49:57 (25643): run_atlas exited; CPU time 80505.692690
12:49:57 (25643): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN