Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:27:15 (1104219): wrapper (7.7.26015): starting
07:27:15 (1104219): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 07:27:15] Arguments: --nthreads 4
[2025-12-17 07:27:15] Threads: 4
[2025-12-17 07:27:15] Checking for CVMFS
[2025-12-17 07:27:15] No cvmfs_config command found, will try listing directly
[2025-12-17 07:27:15] CVMFS is ok
[2025-12-17 07:27:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 07:27:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 07:27:15] Further information can be found at the LHC@home message board.
[2025-12-17 07:27:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 07:27:15] Checking for apptainer binary...
[2025-12-17 07:27:15] which: no apptainer in ((null))
[2025-12-17 07:27:15] apptainer is not installed, using version from CVMFS
[2025-12-17 07:27:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 07:27:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-12-17 07:27:15] apptainer works
[2025-12-17 07:27:15] Set ATHENA_PROC_NUMBER=4
[2025-12-17 07:27:15] Set ATHENA_CORE_NUMBER=4
[2025-12-17 07:27:15] Starting ATLAS job with PandaID=6929962644
[2025-12-17 07:27:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 11:18:20]  *** The last 200 lines of the pilot log: ***
[2025-12-17 11:18:20] 2025-12-17 10:16:57,149 | INFO     | monitor loop #939: job 0:6929962644 is in state 'finished'
[2025-12-17 11:18:20] 2025-12-17 10:16:57,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 11:18:20] 2025-12-17 10:16:57,635 | INFO     | time since job start (13768s) is within the limit (174528.0s)
[2025-12-17 11:18:20] 2025-12-17 10:16:59,642 | INFO     | time since job start (13770s) is within the limit (174528.0s)
[2025-12-17 11:18:20] 2025-12-17 10:16:59,653 | INFO     | monitor loop #940: job 0:6929962644 is in state 'finished'
[2025-12-17 11:18:20] 2025-12-17 10:16:59,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 11:18:20] 2025-12-17 10:17:01,644 | INFO     | time since job start (13772s) is within the limit (174528.0s)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,157 | INFO     | monitor loop #941: job 0:6929962644 is in state 'finished'
[2025-12-17 11:18:20] 2025-12-17 10:17:02,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,297 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 11:18:20] 2025-12-17 10:17:02,319 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2659.6738281250005
[2025-12-17 11:18:20] 2025-12-17 10:17:02,344 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6929962644/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,345 | INFO     | extracted standard info from prmon json
[2025-12-17 11:18:20] 2025-12-17 10:17:02,345 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 11:18:20] 2025-12-17 10:17:02,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 11:18:20] 2025-12-17 10:17:02,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 11:18:20] 2025-12-17 10:17:02,346 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 11:18:20] 2025-12-17 10:17:02,350 | INFO     | fitting pss+swap vs Time
[2025-12-17 11:18:20] 2025-12-17 10:17:02,351 | INFO     | sum of square deviations: 3531973200.0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,352 | INFO     | sum of deviations: -2450614610.0000067
[2025-12-17 11:18:20] 2025-12-17 10:17:02,352 | INFO     | mean x: 1765959716.0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,353 | INFO     | mean y: 2346503.2355555557
[2025-12-17 11:18:20] 2025-12-17 10:17:02,353 | INFO     | intersect: 1227635155.114642
[2025-12-17 11:18:20] 2025-12-17 10:17:02,353 | INFO     | chi2: 1.3516684896475268
[2025-12-17 11:18:20] 2025-12-17 10:17:02,353 | INFO     | sum of square deviations: 3301699115.0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,355 | INFO     | sum of deviations: -2559537887.5000014
[2025-12-17 11:18:20] 2025-12-17 10:17:02,355 | INFO     | mean x: 1765959563.5
[2025-12-17 11:18:20] 2025-12-17 10:17:02,355 | INFO     | mean y: 2346430.4954545456
[2025-12-17 11:18:20] 2025-12-17 10:17:02,355 | INFO     | intersect: 1371350768.3032668
[2025-12-17 11:18:20] 2025-12-17 10:17:02,356 | INFO     | chi2: 1.351198720453304
[2025-12-17 11:18:20] 2025-12-17 10:17:02,356 | INFO     | current chi2=1.351198720453304 (change=0.034754764043165236 %)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,356 | INFO     | right removable region: 219
[2025-12-17 11:18:20] 2025-12-17 10:17:02,356 | INFO     | sum of square deviations: 3301699115.0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,358 | INFO     | sum of deviations: -27965667343.000008
[2025-12-17 11:18:20] 2025-12-17 10:17:02,358 | INFO     | mean x: 1765959868.5
[2025-12-17 11:18:20] 2025-12-17 10:17:02,358 | INFO     | mean y: 2363176.2636363637
[2025-12-17 11:18:20] 2025-12-17 10:17:02,358 | INFO     | intersect: 14960190798.772186
[2025-12-17 11:18:20] 2025-12-17 10:17:02,358 | INFO     | chi2: 0.10693953492506325
[2025-12-17 11:18:20] 2025-12-17 10:17:02,359 | INFO     | current chi2=0.10693953492506325 (change=92.08833114449907 %)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,359 | INFO     | sum of square deviations: 3081657780.0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,361 | INFO     | sum of deviations: -25298525547.0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,361 | INFO     | mean x: 1765960021.0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,361 | INFO     | mean y: 2361314.1209302326
[2025-12-17 11:18:20] 2025-12-17 10:17:02,361 | INFO     | intersect: 14499812976.728697
[2025-12-17 11:18:20] 2025-12-17 10:17:02,361 | INFO     | chi2: 0.10385258551335536
[2025-12-17 11:18:20] 2025-12-17 10:17:02,361 | INFO     | current chi2=0.10385258551335536 (change=2.8866306683220966 %)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,362 | INFO     | left removable region: 20
[2025-12-17 11:18:20] 2025-12-17 10:17:02,362 | INFO     | sum of square deviations: 2443580700.0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,363 | INFO     | sum of deviations: -15469498190.999998
[2025-12-17 11:18:20] 2025-12-17 10:17:02,363 | INFO     | mean x: 1765960143.0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,363 | INFO     | mean y: 2354211.9396984926
[2025-12-17 11:18:20] 2025-12-17 10:17:02,364 | INFO     | intersect: 11182061613.261292
[2025-12-17 11:18:20] 2025-12-17 10:17:02,364 | INFO     | chi2: 0.08337339789371266
[2025-12-17 11:18:20] 2025-12-17 10:17:02,364 | INFO     | current memory leak: -6.33 B/s (using 199 data points, chi2=0.08)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,365 | INFO     | could have reported an average CPU frequency of 2689 MHz (11 samples)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,365 | INFO     | ..............................
[2025-12-17 11:18:20] 2025-12-17 10:17:02,365 | INFO     | . Timing measurements:
[2025-12-17 11:18:20] 2025-12-17 10:17:02,365 | INFO     | . get job = 0 s
[2025-12-17 11:18:20] 2025-12-17 10:17:02,365 | INFO     | . initial setup = 1 s
[2025-12-17 11:18:20] 2025-12-17 10:17:02,365 | INFO     | . payload setup = 8 s
[2025-12-17 11:18:20] 2025-12-17 10:17:02,365 | INFO     | . stage-in = 0 s
[2025-12-17 11:18:20] 2025-12-17 10:17:02,365 | INFO     | . payload execution = 13730 s
[2025-12-17 11:18:20] 2025-12-17 10:17:02,365 | INFO     | . stage-out = 1 s
[2025-12-17 11:18:20] 2025-12-17 10:17:02,365 | INFO     | . log creation = 0 s
[2025-12-17 11:18:20] 2025-12-17 10:17:02,366 | INFO     | ..............................
[2025-12-17 11:18:20] 2025-12-17 10:17:02,462 | INFO     | 
[2025-12-17 11:18:20] 2025-12-17 10:17:02,463 | INFO     | job summary report
[2025-12-17 11:18:20] 2025-12-17 10:17:02,463 | INFO     | --------------------------------------------------
[2025-12-17 11:18:20] 2025-12-17 10:17:02,463 | INFO     | PanDA job id: 6929962644
[2025-12-17 11:18:20] 2025-12-17 10:17:02,463 | INFO     | task id: 47898763
[2025-12-17 11:18:20] 2025-12-17 10:17:02,463 | INFO     | errors: (none)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,463 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 11:18:20] 2025-12-17 10:17:02,463 | INFO     | pilot state: finished 
[2025-12-17 11:18:20] 2025-12-17 10:17:02,463 | INFO     | transexitcode: 0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | exeerrorcode: 0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | exeerrordiag: 
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | exitcode: 0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | exitmsg: OK
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | cpuconsumptiontime: 52835 s
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | nevents: 400
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | neventsw: 0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | pid: 1115552
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | pgrp: 1115552
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | corecount: 4
[2025-12-17 11:18:20] 2025-12-17 10:17:02,464 | INFO     | event service: False
[2025-12-17 11:18:20] 2025-12-17 10:17:02,465 | INFO     | sizes: {0: 2283970, 1: 2283970, 7: 2284260, 11: 2284288, 13742: 2315314, 13745: 2324336, 13747: 2324520, 13755: 2324714}
[2025-12-17 11:18:20] 2025-12-17 10:17:02,465 | INFO     | --------------------------------------------------
[2025-12-17 11:18:20] 2025-12-17 10:17:02,465 | INFO     | 
[2025-12-17 11:18:20] 2025-12-17 10:17:02,465 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-12-17 11:18:20] 2025-12-17 10:17:02,494 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,495 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,495 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,495 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,496 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,497 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,498 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 11:18:20] 2025-12-17 10:17:02,498 | INFO     | job 6929962644 has completed (purged errors)
[2025-12-17 11:18:20] 2025-12-17 10:17:02,498 | INFO     | overall cleanup function is called
[2025-12-17 11:18:20] 2025-12-17 10:17:03,507 | INFO     | --- collectZombieJob: --- 10, [1115552]
[2025-12-17 11:18:20] 2025-12-17 10:17:03,508 | INFO     | zombie collector waiting for pid 1115552
[2025-12-17 11:18:20] 2025-12-17 10:17:03,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 11:18:20] 2025-12-17 10:17:03,508 | INFO     | collected zombie processes
[2025-12-17 11:18:20] 2025-12-17 10:17:03,508 | INFO     | will attempt to kill all subprocesses of pid=1115552
[2025-12-17 11:18:20] 2025-12-17 10:17:04,347 | INFO     | process IDs to be killed: [1115552] (in reverse order)
[2025-12-17 11:18:20] 2025-12-17 10:17:04,597 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 11:18:20] 2025-12-17 10:17:04,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 11:18:20] 2025-12-17 10:17:04,628 | INFO     | did not find any defunct processes belonging to 1115552
[2025-12-17 11:18:20] 2025-12-17 10:17:04,659 | INFO     | did not find any defunct processes belonging to 1115552
[2025-12-17 11:18:20] 2025-12-17 10:17:04,659 | INFO     | ready for new job
[2025-12-17 11:18:20] 2025-12-17 10:17:04,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 11:18:20] 2025-12-17 10:17:04,662 | INFO     | ***************************************
[2025-12-17 11:18:20] 2025-12-17 10:17:04,662 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 11:18:20] 2025-12-17 10:17:04,662 | INFO     | ***************************************
[2025-12-17 11:18:20] 2025-12-17 10:17:04,662 | INFO     | 
[2025-12-17 11:18:20] 2025-12-17 10:17:04,670 | INFO     | architecture information:
[2025-12-17 11:18:20] 2025-12-17 10:17:04,671 | INFO     | executing command: cat /etc/os-release
[2025-12-17 11:18:20] 2025-12-17 10:17:04,690 | INFO     | cat /etc/os-release:
[2025-12-17 11:18:20] NAME="CentOS Linux"
[2025-12-17 11:18:20] VERSION="7 (Core)"
[2025-12-17 11:18:20] ID="centos"
[2025-12-17 11:18:20] ID_LIKE="rhel fedora"
[2025-12-17 11:18:20] VERSION_ID="7"
[2025-12-17 11:18:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 11:18:20] ANSI_COLOR="0;31"
[2025-12-17 11:18:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 11:18:20] HOME_URL="https://www.centos.org/"
[2025-12-17 11:18:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 11:18:20] 
[2025-12-17 11:18:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 11:18:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 11:18:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 11:18:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 11:18:20] 
[2025-12-17 11:18:20] 2025-12-17 10:17:04,691 | INFO     | ***************************************
[2025-12-17 11:18:20] 2025-12-17 10:17:05,194 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-12-17 11:18:20] 2025-12-17 10:17:05,216 | INFO     | sufficient remaining disk space (3338926030848 B)
[2025-12-17 11:18:20] 2025-12-17 10:17:05,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 11:18:20] 2025-12-17 10:17:05,217 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 11:18:20] 2025-12-17 10:17:05,217 | INFO     | update_server=False
[2025-12-17 11:18:20] 2025-12-17 10:17:05,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 11:18:20] 2025-12-17 10:17:05,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 11:18:20] 2025-12-17 10:17:05,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 11:18:20] 2025-12-17 10:17:05,326 | INFO     | all payload control threads have been joined
[2025-12-17 11:18:20] 2025-12-17 10:17:05,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 11:18:20] 2025-12-17 10:17:05,668 | INFO     | aborting loop
[2025-12-17 11:18:20] 2025-12-17 10:17:05,739 | INFO     | all data control threads have been joined
[2025-12-17 11:18:20] 2025-12-17 10:17:06,222 | INFO     | [job] retrieve thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:06,332 | INFO     | [payload] control thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:06,673 | INFO     | [job] job monitor thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:06,712 | INFO     | [data] copytool_in thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:06,745 | INFO     | [data] control thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:06,891 | INFO     | all job control threads have been joined
[2025-12-17 11:18:20] 2025-12-17 10:17:06,907 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:07,072 | INFO     | [job] validate thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:07,077 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:07,083 | INFO     | [payload] validate_post thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:07,244 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:07,303 | INFO     | [data] copytool_out thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:07,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 11:18:20] 2025-12-17 10:17:07,482 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:07,697 | INFO     | [payload] failed_post thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:07,897 | INFO     | [job] control thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:08,478 | INFO     | [job] queue monitor thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:09,263 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 11:18:20] 2025-12-17 10:17:35,746 | INFO     | PID=1108210 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-17 11:18:20] 2025-12-17 10:17:35,746 | INFO     | .. there are 7 such processes running
[2025-12-17 11:18:20] 2025-12-17 10:17:35,746 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 11:18:20] 2025-12-17 10:17:35,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 11:18:20] 2025-12-17 10:17:35,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 11:18:20] 2025-12-17 10:17:51,183 | INFO     | [monitor] cgroup control has ended
[2025-12-17 11:18:20] 2025-12-17 10:17:52,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22578502567744)>', '<ExcThread(monitor, started 22578265556736)>']
[2025-12-17 11:18:20] 2025-12-17 10:17:52,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 11:18:20] 2025-12-17 10:17:52,833 | INFO     | [monitor] control thread has ended
[2025-12-17 11:18:20] 2025-12-17 10:17:57,821 | INFO     | all workflow threads have been joined
[2025-12-17 11:18:20] 2025-12-17 10:17:57,822 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 11:18:20] 2025-12-17 10:17:57,822 | INFO     | traces error code: 0
[2025-12-17 11:18:20] 2025-12-17 10:17:57,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 11:18:20] 2025-12-17 10:17:57,967 [wrapper] ==== pilot stdout END ====
[2025-12-17 11:18:20] 2025-12-17 10:17:57,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 11:18:20] 2025-12-17 10:17:57,975 [wrapper] pilotpid: 1108210
[2025-12-17 11:18:20] 2025-12-17 10:17:57,979 [wrapper] Pilot exit status: 0
[2025-12-17 11:18:20] 2025-12-17 10:17:57,994 [wrapper] pandaids: 6929962644
[2025-12-17 11:18:20] 2025-12-17 10:17:58,172 [wrapper] cleanup supervisor_pilot 1536439 1108211
[2025-12-17 11:18:20] 2025-12-17 10:17:58,177 [wrapper] Test setup, not cleaning
[2025-12-17 11:18:20] 2025-12-17 10:17:58,181 [wrapper] apfmon messages muted
[2025-12-17 11:18:20] 2025-12-17 10:17:58,185 [wrapper] ==== wrapper stdout END ====
[2025-12-17 11:18:20] 2025-12-17 10:17:58,189 [wrapper] ==== wrapper stderr END ====
[2025-12-17 11:18:20]  *** Error codes and diagnostics ***
[2025-12-17 11:18:20]     "exeErrorCode": 0,
[2025-12-17 11:18:20]     "exeErrorDiag": "",
[2025-12-17 11:18:20]     "pilotErrorCode": 0,
[2025-12-17 11:18:20]     "pilotErrorDiag": "",
[2025-12-17 11:18:20]  *** Listing of results directory ***
[2025-12-17 11:18:20] total 445888
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc    579449 Dec 15 19:24 pilot3.tar.gz
[2025-12-17 11:18:20] -rwx------ 1 boinc boinc     36322 Dec 15 19:28 runpilot2-wrapper.sh
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc      5112 Dec 15 19:31 queuedata.json
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc       100 Dec 17 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 11:18:20] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 07:27 run_atlas
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc       105 Dec 17 07:27 job.xml
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc      6691 Dec 17 07:27 init_data.xml
[2025-12-17 11:18:20] -rw-r--r-- 2 boinc boinc 224439288 Dec 17 07:27 EVNT.47898761._000711.pool.root.1
[2025-12-17 11:18:20] -rw-r--r-- 2 boinc boinc     15847 Dec 17 07:27 start_atlas.sh
[2025-12-17 11:18:20] drwxrwx--x 2 boinc boinc      4096 Dec 17 07:27 shared
[2025-12-17 11:18:20] -rw-r--r-- 2 boinc boinc    592399 Dec 17 07:27 input.tar.gz
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc         0 Dec 17 07:27 boinc_lockfile
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc      2508 Dec 17 07:27 pandaJob.out
[2025-12-17 11:18:20] -rw------- 1 boinc boinc    987409 Dec 17 07:27 agis_schedconf.cvmfs.json
[2025-12-17 11:18:20] drwx------ 5 boinc boinc      4096 Dec 17 07:27 pilot3
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc       528 Dec 17 11:16 boinc_task_state.xml
[2025-12-17 11:18:20] -rw------- 1 boinc boinc 223612240 Dec 17 11:16 HITS.47898763._017824.pool.root.1
[2025-12-17 11:18:20] -rw------- 1 boinc boinc      1031 Dec 17 11:16 memory_monitor_summary.json
[2025-12-17 11:18:20] -rw------- 1 boinc boinc   1516240 Dec 17 11:16 agis_ddmendpoints.agis.ALL.json
[2025-12-17 11:18:20] -rw------- 1 boinc boinc    400019 Dec 17 11:16 log.47898763._017824.job.log.tgz.1
[2025-12-17 11:18:20] -rw------- 1 boinc boinc        95 Dec 17 11:16 pilot_heartbeat.json
[2025-12-17 11:18:20] -rw------- 1 boinc boinc      7786 Dec 17 11:17 heartbeat.json
[2025-12-17 11:18:20] -rw------- 1 boinc boinc      4836 Dec 17 11:17 pilotlog.txt
[2025-12-17 11:18:20] -rw------- 1 boinc boinc   1910896 Dec 17 11:17 log.47898763._017824.job.log.1
[2025-12-17 11:18:20] -rw------- 1 boinc boinc       357 Dec 17 11:17 output.list
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc       620 Dec 17 11:17 runtime_log
[2025-12-17 11:18:20] -rw------- 1 boinc boinc   2334720 Dec 17 11:17 result.tar.gz
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc      9223 Dec 17 11:17 runtime_log.err
[2025-12-17 11:18:20] -rw------- 1 boinc boinc       666 Dec 17 11:17 HxyKDmFUSp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCbYKDmSVPpXm.diag
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc        26 Dec 17 11:18 wrapper_checkpoint.txt
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc      8192 Dec 17 11:18 boinc_mmap_file
[2025-12-17 11:18:20] -rw-r--r-- 1 boinc boinc     21154 Dec 17 11:18 stderr.txt
[2025-12-17 11:18:20] HITS file was successfully produced:
[2025-12-17 11:18:20] -rw------- 1 boinc boinc 223612240 Dec 17 11:16 shared/HITS.pool.root.1
[2025-12-17 11:18:20]  *** Contents of shared directory: ***
[2025-12-17 11:18:20] total 440436
[2025-12-17 11:18:20] -rw-r--r-- 2 boinc boinc 224439288 Dec 17 07:27 ATLAS.root_0
[2025-12-17 11:18:20] -rw-r--r-- 2 boinc boinc     15847 Dec 17 07:27 start_atlas.sh
[2025-12-17 11:18:20] -rw-r--r-- 2 boinc boinc    592399 Dec 17 07:27 input.tar.gz
[2025-12-17 11:18:20] -rw------- 1 boinc boinc 223612240 Dec 17 11:16 HITS.pool.root.1
[2025-12-17 11:18:20] -rw------- 1 boinc boinc   2334720 Dec 17 11:17 result.tar.gz
11:18:21 (1104219): run_atlas exited; CPU time 53763.491935
11:18:21 (1104219): called boinc_finish(0)

</stderr_txt>
]]>

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