Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:48:53 (15213): wrapper (7.7.26015): starting
00:48:53 (15213): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 00:48:53] Arguments: --nthreads 8
[2025-12-16 00:48:53] Threads: 8
[2025-12-16 00:48:53] Checking for CVMFS
[2025-12-16 00:48:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 00:48:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 00:48:57] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 00:48:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 00:48:58] 2.11.2.0 22837 96 53548 154051 3 11 24543654 25165825 4712 130560 0 366624 99.729 166341 1179 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-16 00:48:58] CVMFS is ok
[2025-12-16 00:48:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 00:48:58] Checking for apptainer binary...
[2025-12-16 00:48:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 00:48:58] Running /usr/bin/apptainer --version
[2025-12-16 00:48:58] apptainer version 1.3.2-1.el7
[2025-12-16 00:48:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 00:49:05] cg-vwn396.simple-grid.lan
[2025-12-16 00:49:05] apptainer works
[2025-12-16 00:49:05] Set ATHENA_PROC_NUMBER=8
[2025-12-16 00:49:05] Set ATHENA_CORE_NUMBER=8
[2025-12-16 00:49:05] Starting ATLAS job with PandaID=6929962616
[2025-12-16 00:49:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 06:50:13]  *** The last 200 lines of the pilot log: ***
[2025-12-16 06:50:13] 2025-12-16 05:49:17,014 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-16 06:50:13] 2025-12-16 05:49:17,016 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6929962616/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 06:50:13] 2025-12-16 05:49:17,017 | INFO     | extracted standard info from prmon json
[2025-12-16 06:50:13] 2025-12-16 05:49:17,017 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 06:50:13] 2025-12-16 05:49:17,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 06:50:13] 2025-12-16 05:49:17,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 06:50:13] 2025-12-16 05:49:17,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 06:50:13] 2025-12-16 05:49:17,024 | INFO     | fitting pss+swap vs Time
[2025-12-16 06:50:13] 2025-12-16 05:49:17,025 | INFO     | sum of square deviations: 12403750705.5
[2025-12-16 06:50:13] 2025-12-16 05:49:17,029 | INFO     | sum of deviations: 139336140830.0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,029 | INFO     | mean x: 1765853600.5
[2025-12-16 06:50:13] 2025-12-16 05:49:17,029 | INFO     | mean y: 2454738.397660819
[2025-12-16 06:50:13] 2025-12-16 05:49:17,029 | INFO     | intersect: -19834063408.918034
[2025-12-16 06:50:13] 2025-12-16 05:49:17,030 | INFO     | chi2: 5.675399917747318
[2025-12-16 06:50:13] 2025-12-16 05:49:17,031 | INFO     | sum of square deviations: 11867638328.0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,034 | INFO     | sum of deviations: 159960094613.00006
[2025-12-16 06:50:13] 2025-12-16 05:49:17,034 | INFO     | mean x: 1765853448.0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,034 | INFO     | mean y: 2460527.706231454
[2025-12-16 06:50:13] 2025-12-16 05:49:17,035 | INFO     | intersect: -23798912315.644913
[2025-12-16 06:50:13] 2025-12-16 05:49:17,035 | INFO     | chi2: 4.915095490004874
[2025-12-16 06:50:13] 2025-12-16 05:49:17,035 | INFO     | current chi2=4.915095490004874 (change=13.396490798206589 %)
[2025-12-16 06:50:13] 2025-12-16 05:49:17,035 | INFO     | right removable region: 336
[2025-12-16 06:50:13] 2025-12-16 05:49:17,036 | INFO     | sum of square deviations: 11867638328.0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,040 | INFO     | sum of deviations: 25808840994.0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,040 | INFO     | mean x: 1765853753.0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,040 | INFO     | mean y: 2487006.2670623143
[2025-12-16 06:50:13] 2025-12-16 05:49:17,040 | INFO     | intersect: -3837757991.9570827
[2025-12-16 06:50:13] 2025-12-16 05:49:17,041 | INFO     | chi2: 1.5001904826029926
[2025-12-16 06:50:13] 2025-12-16 05:49:17,041 | INFO     | current chi2=1.5001904826029926 (change=73.56678816744162 %)
[2025-12-16 06:50:13] 2025-12-16 05:49:17,041 | INFO     | sum of square deviations: 11347200663.0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,045 | INFO     | sum of deviations: -11394695567.999998
[2025-12-16 06:50:13] 2025-12-16 05:49:17,045 | INFO     | mean x: 1765853905.5
[2025-12-16 06:50:13] 2025-12-16 05:49:17,045 | INFO     | mean y: 2497840.3975903615
[2025-12-16 06:50:13] 2025-12-16 05:49:17,045 | INFO     | intersect: 1775742913.6381128
[2025-12-16 06:50:13] 2025-12-16 05:49:17,046 | INFO     | chi2: 0.8383214723403806
[2025-12-16 06:50:13] 2025-12-16 05:49:17,046 | INFO     | current chi2=0.8383214723403806 (change=44.118998083109936 %)
[2025-12-16 06:50:13] 2025-12-16 05:49:17,046 | INFO     | sum of square deviations: 10842205148.0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,050 | INFO     | sum of deviations: -9902902138.000002
[2025-12-16 06:50:13] 2025-12-16 05:49:17,050 | INFO     | mean x: 1765854058.0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,050 | INFO     | mean y: 2497374.629969419
[2025-12-16 06:50:13] 2025-12-16 05:49:17,050 | INFO     | intersect: 1615368528.3905973
[2025-12-16 06:50:13] 2025-12-16 05:49:17,051 | INFO     | chi2: 0.8234177399397715
[2025-12-16 06:50:13] 2025-12-16 05:49:17,051 | INFO     | current chi2=0.8234177399397715 (change=1.777806353808595 %)
[2025-12-16 06:50:13] 2025-12-16 05:49:17,051 | INFO     | left removable region: 30
[2025-12-16 06:50:13] 2025-12-16 05:49:17,051 | INFO     | sum of square deviations: 8884603792.5
[2025-12-16 06:50:13] 2025-12-16 05:49:17,054 | INFO     | sum of deviations: 8402299575.999999
[2025-12-16 06:50:13] 2025-12-16 05:49:17,055 | INFO     | mean x: 1765854332.5
[2025-12-16 06:50:13] 2025-12-16 05:49:17,055 | INFO     | mean y: 2505283.522875817
[2025-12-16 06:50:13] 2025-12-16 05:49:17,055 | INFO     | intersect: -1667488950.9715726
[2025-12-16 06:50:13] 2025-12-16 05:49:17,055 | INFO     | chi2: 0.0008008441651582264
[2025-12-16 06:50:13] 2025-12-16 05:49:17,056 | INFO     | current memory leak: 0.95 B/s (using 306 data points, chi2=0.00)
[2025-12-16 06:50:13] 2025-12-16 05:49:17,056 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-16 06:50:13] 2025-12-16 05:49:17,057 | INFO     | ..............................
[2025-12-16 06:50:13] 2025-12-16 05:49:17,057 | INFO     | . Timing measurements:
[2025-12-16 06:50:13] 2025-12-16 05:49:17,057 | INFO     | . get job = 0 s
[2025-12-16 06:50:13] 2025-12-16 05:49:17,057 | INFO     | . initial setup = 9 s
[2025-12-16 06:50:13] 2025-12-16 05:49:17,057 | INFO     | . payload setup = 126 s
[2025-12-16 06:50:13] 2025-12-16 05:49:17,057 | INFO     | . stage-in = 0 s
[2025-12-16 06:50:13] 2025-12-16 05:49:17,057 | INFO     | . payload execution = 21011 s
[2025-12-16 06:50:13] 2025-12-16 05:49:17,057 | INFO     | . stage-out = 3 s
[2025-12-16 06:50:13] 2025-12-16 05:49:17,057 | INFO     | . log creation = 1 s
[2025-12-16 06:50:13] 2025-12-16 05:49:17,057 | INFO     | ..............................
[2025-12-16 06:50:13] 2025-12-16 05:49:17,579 | INFO     | 
[2025-12-16 06:50:13] 2025-12-16 05:49:17,579 | INFO     | job summary report
[2025-12-16 06:50:13] 2025-12-16 05:49:17,579 | INFO     | --------------------------------------------------
[2025-12-16 06:50:13] 2025-12-16 05:49:17,579 | INFO     | PanDA job id: 6929962616
[2025-12-16 06:50:13] 2025-12-16 05:49:17,579 | INFO     | task id: 47898763
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | errors: (none)
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | pilot state: finished 
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | transexitcode: 0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | exeerrorcode: 0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | exeerrordiag: 
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | exitcode: 0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | exitmsg: OK
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | cpuconsumptiontime: 79004 s
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | nevents: 400
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | neventsw: 0
[2025-12-16 06:50:13] 2025-12-16 05:49:17,580 | INFO     | pid: 25893
[2025-12-16 06:50:13] 2025-12-16 05:49:17,581 | INFO     | pgrp: 25893
[2025-12-16 06:50:13] 2025-12-16 05:49:17,581 | INFO     | corecount: 8
[2025-12-16 06:50:13] 2025-12-16 05:49:17,581 | INFO     | event service: False
[2025-12-16 06:50:13] 2025-12-16 05:49:17,581 | INFO     | sizes: {0: 2283731, 1: 2283986, 12: 2283986, 23: 2284014, 33: 2284042, 44: 2284098, 55: 2284254, 65: 2284282, 76: 2284310, 86: 2284628, 87: 2284656, 21142: 2318066
[2025-12-16 06:50:13] 2025-12-16 05:49:17,581 | INFO     | --------------------------------------------------
[2025-12-16 06:50:13] 2025-12-16 05:49:17,581 | INFO     | 
[2025-12-16 06:50:13] 2025-12-16 05:49:17,581 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-12-16 06:50:13] 2025-12-16 05:49:18,084 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,085 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,085 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,085 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,085 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,086 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 06:50:13] 2025-12-16 05:49:18,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 06:50:13] 2025-12-16 05:49:18,086 | INFO     | job 6929962616 has completed (purged errors)
[2025-12-16 06:50:13] 2025-12-16 05:49:18,087 | INFO     | overall cleanup function is called
[2025-12-16 06:50:13] 2025-12-16 05:49:18,101 | INFO     | PID=19325 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 06:50:13] 2025-12-16 05:49:18,101 | INFO     | .. there are 9 such processes running
[2025-12-16 06:50:13] 2025-12-16 05:49:19,104 | INFO     | --- collectZombieJob: --- 10, [25893]
[2025-12-16 06:50:13] 2025-12-16 05:49:19,104 | INFO     | zombie collector waiting for pid 25893
[2025-12-16 06:50:13] 2025-12-16 05:49:19,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 06:50:13] 2025-12-16 05:49:19,104 | INFO     | collected zombie processes
[2025-12-16 06:50:13] 2025-12-16 05:49:19,104 | INFO     | will attempt to kill all subprocesses of pid=25893
[2025-12-16 06:50:13] 2025-12-16 05:49:19,237 | INFO     | process IDs to be killed: [25893] (in reverse order)
[2025-12-16 06:50:13] 2025-12-16 05:49:19,942 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 06:50:13] 2025-12-16 05:49:19,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 06:50:13] 2025-12-16 05:49:19,946 | INFO     | did not find any defunct processes belonging to 25893
[2025-12-16 06:50:13] 2025-12-16 05:49:19,949 | INFO     | did not find any defunct processes belonging to 25893
[2025-12-16 06:50:13] 2025-12-16 05:49:19,950 | INFO     | ready for new job
[2025-12-16 06:50:13] 2025-12-16 05:49:19,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 06:50:13] 2025-12-16 05:49:19,952 | INFO     | ***************************************
[2025-12-16 06:50:13] 2025-12-16 05:49:19,952 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 06:50:13] 2025-12-16 05:49:19,953 | INFO     | ***************************************
[2025-12-16 06:50:13] 2025-12-16 05:49:19,953 | INFO     | 
[2025-12-16 06:50:13] 2025-12-16 05:49:19,953 | INFO     | pilot is running in a VM
[2025-12-16 06:50:13] 2025-12-16 05:49:19,953 | INFO     | architecture information:
[2025-12-16 06:50:13] 2025-12-16 05:49:19,962 | INFO     | executing command: cat /etc/os-release
[2025-12-16 06:50:13] 2025-12-16 05:49:20,029 | INFO     | cat /etc/os-release:
[2025-12-16 06:50:13] NAME="CentOS Linux"
[2025-12-16 06:50:13] VERSION="7 (Core)"
[2025-12-16 06:50:13] ID="centos"
[2025-12-16 06:50:13] ID_LIKE="rhel fedora"
[2025-12-16 06:50:13] VERSION_ID="7"
[2025-12-16 06:50:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 06:50:13] ANSI_COLOR="0;31"
[2025-12-16 06:50:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 06:50:13] HOME_URL="https://www.centos.org/"
[2025-12-16 06:50:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 06:50:13] 
[2025-12-16 06:50:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 06:50:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 06:50:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 06:50:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 06:50:13] 
[2025-12-16 06:50:13] 2025-12-16 05:49:20,029 | INFO     | ***************************************
[2025-12-16 06:50:13] 2025-12-16 05:49:20,533 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-12-16 06:50:13] 2025-12-16 05:49:20,585 | INFO     | sufficient remaining disk space (495940796416 B)
[2025-12-16 06:50:13] 2025-12-16 05:49:20,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 06:50:13] 2025-12-16 05:49:20,585 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 06:50:13] 2025-12-16 05:49:20,585 | INFO     | update_server=False
[2025-12-16 06:50:13] 2025-12-16 05:49:20,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 06:50:13] 2025-12-16 05:49:20,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:50:13] 2025-12-16 05:49:20,586 | INFO     | aborting loop
[2025-12-16 06:50:13] 2025-12-16 05:49:21,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 06:50:13] 2025-12-16 05:49:21,243 | INFO     | all job control threads have been joined
[2025-12-16 06:50:13] 2025-12-16 05:49:21,347 | INFO     | all data control threads have been joined
[2025-12-16 06:50:13] 2025-12-16 05:49:21,591 | INFO     | [job] retrieve thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:21,592 | INFO     | [job] job monitor thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:21,655 | INFO     | all payload control threads have been joined
[2025-12-16 06:50:13] 2025-12-16 05:49:21,674 | INFO     | [data] copytool_in thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:21,714 | INFO     | [payload] validate_post thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:22,205 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:22,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:50:13] 2025-12-16 05:49:22,228 | INFO     | [job] validate thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:22,248 | INFO     | [job] control thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:22,308 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:22,316 | INFO     | [payload] failed_post thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:22,353 | INFO     | [data] control thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:22,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 06:50:13] 2025-12-16 05:49:22,661 | INFO     | [payload] control thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:22,975 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:23,030 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:23,137 | INFO     | [data] copytool_out thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:23,226 | INFO     | [job] queue monitor thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:26,439 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 06:50:13] 2025-12-16 05:49:50,295 | INFO     | PID=19325 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 06:50:13] 2025-12-16 05:49:50,295 | INFO     | .. there are 9 such processes running
[2025-12-16 06:50:13] 2025-12-16 05:49:50,296 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 06:50:13] 2025-12-16 05:49:50,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 06:50:13] 2025-12-16 05:49:50,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 06:50:13] 2025-12-16 05:50:04,030 | INFO     | [monitor] cgroup control has ended
[2025-12-16 06:50:13] 2025-12-16 05:50:06,021 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836227729216)>', '<ExcThread(monitor, started 139835788478208)>']
[2025-12-16 06:50:13] 2025-12-16 05:50:06,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 06:50:13] 2025-12-16 05:50:06,394 | INFO     | [monitor] control thread has ended
[2025-12-16 06:50:13] 2025-12-16 05:50:11,047 | INFO     | all workflow threads have been joined
[2025-12-16 06:50:13] 2025-12-16 05:50:11,047 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 06:50:13] 2025-12-16 05:50:11,047 | INFO     | traces error code: 0
[2025-12-16 06:50:13] 2025-12-16 05:50:11,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 06:50:13] 2025-12-16 05:50:11,261 [wrapper] ==== pilot stdout END ====
[2025-12-16 06:50:13] 2025-12-16 05:50:11,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 06:50:13] 2025-12-16 05:50:11,344 [wrapper] pilotpid: 19325
[2025-12-16 06:50:13] 2025-12-16 05:50:11,388 [wrapper] Pilot exit status: 0
[2025-12-16 06:50:13] 2025-12-16 05:50:11,827 [wrapper] pandaids: 6929962616
[2025-12-16 06:50:13] 2025-12-16 05:50:12,446 [wrapper] cleanup supervisor_pilot 26707 19326
[2025-12-16 06:50:13] 2025-12-16 05:50:12,485 [wrapper] Test setup, not cleaning
[2025-12-16 06:50:13] 2025-12-16 05:50:12,491 [wrapper] apfmon messages muted
[2025-12-16 06:50:13] 2025-12-16 05:50:12,547 [wrapper] ==== wrapper stdout END ====
[2025-12-16 06:50:13] 2025-12-16 05:50:12,579 [wrapper] ==== wrapper stderr END ====
[2025-12-16 06:50:13]  *** Error codes and diagnostics ***
[2025-12-16 06:50:13]     "exeErrorCode": 0,
[2025-12-16 06:50:13]     "exeErrorDiag": "",
[2025-12-16 06:50:13]     "pilotErrorCode": 0,
[2025-12-16 06:50:13]     "pilotErrorDiag": "",
[2025-12-16 06:50:13]  *** Listing of results directory ***
[2025-12-16 06:50:13] total 447840
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc    579449 Dec 15 19:24 pilot3.tar.gz
[2025-12-16 06:50:13] -rwx------. 1 boinc boinc     36322 Dec 15 19:28 runpilot2-wrapper.sh
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc      5112 Dec 15 19:31 queuedata.json
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc       100 Dec 16 00:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 06:50:13] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 00:48 run_atlas
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc       105 Dec 16 00:48 job.xml
[2025-12-16 06:50:13] -rw-r--r--. 2 boinc boinc 224302067 Dec 16 00:48 EVNT.47898761._000710.pool.root.1
[2025-12-16 06:50:13] -rw-r--r--. 2 boinc boinc     15847 Dec 16 00:48 start_atlas.sh
[2025-12-16 06:50:13] drwxrwx--x. 2 boinc boinc        68 Dec 16 00:48 shared
[2025-12-16 06:50:13] -rw-r--r--. 2 boinc boinc    592396 Dec 16 00:48 input.tar.gz
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc      6393 Dec 16 00:48 init_data.xml
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc         0 Dec 16 00:48 boinc_lockfile
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc      2508 Dec 16 00:49 pandaJob.out
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc    994555 Dec 16 00:52 agis_schedconf.cvmfs.json
[2025-12-16 06:50:13] drwx------. 5 boinc boinc      4096 Dec 16 00:52 pilot3
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc       531 Dec 16 06:46 boinc_task_state.xml
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc 223536451 Dec 16 06:46 HITS.47898763._017796.pool.root.1
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc      1018 Dec 16 06:47 memory_monitor_summary.json
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc   1516240 Dec 16 06:47 agis_ddmendpoints.agis.ALL.json
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc    550435 Dec 16 06:47 log.47898763._017796.job.log.tgz.1
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc      7777 Dec 16 06:49 heartbeat.json
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc        95 Dec 16 06:49 pilot_heartbeat.json
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc      4884 Dec 16 06:50 pilotlog.txt
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc      8192 Dec 16 06:50 boinc_mmap_file
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc        28 Dec 16 06:50 wrapper_checkpoint.txt
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc   2873574 Dec 16 06:50 log.47898763._017796.job.log.1
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc       357 Dec 16 06:50 output.list
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc       620 Dec 16 06:50 runtime_log
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc   3440640 Dec 16 06:50 result.tar.gz
[2025-12-16 06:50:13] -rw-------. 1 boinc boinc       658 Dec 16 06:50 yj2KDmFUSp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmL9TKDmUijf1n.diag
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc      8817 Dec 16 06:50 runtime_log.err
[2025-12-16 06:50:13] -rw-r--r--. 1 boinc boinc     20882 Dec 16 06:50 stderr.txt
[2025-12-16 06:50:14] HITS file was successfully produced:
[2025-12-16 06:50:14] -rw-------. 1 boinc boinc 223536451 Dec 16 06:46 shared/HITS.pool.root.1
[2025-12-16 06:50:14]  *** Contents of shared directory: ***
[2025-12-16 06:50:14] total 441304
[2025-12-16 06:50:14] -rw-r--r--. 2 boinc boinc 224302067 Dec 16 00:48 ATLAS.root_0
[2025-12-16 06:50:14] -rw-r--r--. 2 boinc boinc     15847 Dec 16 00:48 start_atlas.sh
[2025-12-16 06:50:14] -rw-r--r--. 2 boinc boinc    592396 Dec 16 00:48 input.tar.gz
[2025-12-16 06:50:14] -rw-------. 1 boinc boinc 223536451 Dec 16 06:46 HITS.pool.root.1
[2025-12-16 06:50:14] -rw-------. 1 boinc boinc   3440640 Dec 16 06:50 result.tar.gz
06:50:15 (15213): run_atlas exited; CPU time 79324.474396
06:50:15 (15213): called boinc_finish(0)

</stderr_txt>
]]>

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