Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:15 (1317947): wrapper (7.7.26015): starting
09:35:15 (1317947): wrapper: running run_atlas (--nthreads 3)
[2025-12-16 09:35:15] Arguments: --nthreads 3
[2025-12-16 09:35:15] Threads: 3
[2025-12-16 09:35:15] Checking for CVMFS
[2025-12-16 09:35:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 09:35:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 09:35:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 09:35:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 09:35:15] 2.9.2.0 256385 4149 83148 154064 2 57 32375469 36864001 0 130560 0 2783390 99.990 147950 20477 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 09:35:15] CVMFS is ok
[2025-12-16 09:35:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 09:35:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 09:35:15] Further information can be found at the LHC@home message board.
[2025-12-16 09:35:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 09:35:15] Checking for apptainer binary...
[2025-12-16 09:35:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 09:35:15] Running /usr/bin/apptainer --version
[2025-12-16 09:35:15] apptainer version 1.4.1-1.1
[2025-12-16 09:35:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 09:35:15] thA305
[2025-12-16 09:35:15] apptainer works
[2025-12-16 09:35:15] Set ATHENA_PROC_NUMBER=3
[2025-12-16 09:35:15] Set ATHENA_CORE_NUMBER=3
[2025-12-16 09:35:15] Starting ATLAS job with PandaID=6929962776
[2025-12-16 09:35:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 11:04:51]  *** The last 200 lines of the pilot log: ***
[2025-12-16 11:04:51] 2025-12-16 10:04:20,129 | INFO     | ***************************************
[2025-12-16 11:04:51] 2025-12-16 10:04:20,129 | INFO     | 
[2025-12-16 11:04:51] 2025-12-16 10:04:20,129 | INFO     | architecture information:
[2025-12-16 11:04:51] 2025-12-16 10:04:20,130 | INFO     | executing command: cat /etc/os-release
[2025-12-16 11:04:51] 2025-12-16 10:04:20,138 | INFO     | cat /etc/os-release:
[2025-12-16 11:04:51] NAME="CentOS Linux"
[2025-12-16 11:04:51] VERSION="7 (Core)"
[2025-12-16 11:04:51] ID="centos"
[2025-12-16 11:04:51] ID_LIKE="rhel fedora"
[2025-12-16 11:04:51] VERSION_ID="7"
[2025-12-16 11:04:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 11:04:51] ANSI_COLOR="0;31"
[2025-12-16 11:04:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 11:04:51] HOME_URL="https://www.centos.org/"
[2025-12-16 11:04:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 11:04:51] 
[2025-12-16 11:04:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 11:04:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 11:04:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 11:04:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 11:04:51] 
[2025-12-16 11:04:51] 2025-12-16 10:04:20,138 | INFO     | ***************************************
[2025-12-16 11:04:51] 2025-12-16 10:04:20,641 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-16 11:04:51] 2025-12-16 10:04:20,654 | INFO     | sufficient remaining disk space (227475980288 B)
[2025-12-16 11:04:51] 2025-12-16 10:04:20,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 11:04:51] 2025-12-16 10:04:20,654 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 11:04:51] 2025-12-16 10:04:20,654 | INFO     | update_server=False
[2025-12-16 11:04:51] 2025-12-16 10:04:20,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 11:04:51] 2025-12-16 10:04:20,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 11:04:51] 2025-12-16 10:04:20,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 11:04:51] 2025-12-16 10:04:21,148 | INFO     | all job control threads have been joined
[2025-12-16 11:04:51] 2025-12-16 10:04:21,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 11:04:51] 2025-12-16 10:04:21,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 11:04:51] 2025-12-16 10:04:21,374 | INFO     | aborting loop
[2025-12-16 11:04:51] 2025-12-16 10:04:21,430 | INFO     | all payload control threads have been joined
[2025-12-16 11:04:51] 2025-12-16 10:04:21,443 | INFO     | all data control threads have been joined
[2025-12-16 11:04:51] 2025-12-16 10:04:21,660 | INFO     | [job] queue monitor thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:21,660 | INFO     | [job] retrieve thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:21,763 | INFO     | [payload] failed_post thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:22,077 | INFO     | [data] copytool_in thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:22,154 | INFO     | [job] control thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:22,311 | INFO     | [payload] validate_post thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:22,379 | INFO     | [job] job monitor thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:22,436 | INFO     | [payload] control thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:22,449 | INFO     | [data] control thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:22,627 | INFO     | [job] validate thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:22,710 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:22,788 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:22,934 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:23,362 | INFO     | [data] copytool_out thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:24,830 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:26,805 | INFO     | [monitor] cgroup control has ended
[2025-12-16 11:04:51] 2025-12-16 10:04:31,204 | INFO     | job.realtimelogging is not enabled
[2025-12-16 11:04:51] 2025-12-16 10:04:32,210 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 11:04:51] 2025-12-16 10:04:32,580 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140124577077056)>', '<ExcThread(monitor, started 140123500963584)>']
[2025-12-16 11:04:51] 2025-12-16 10:04:37,582 | INFO     | all workflow threads have been joined
[2025-12-16 11:04:51] 2025-12-16 10:04:37,582 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 11:04:51] 2025-12-16 10:04:37,583 | INFO     | traces error code: 0
[2025-12-16 11:04:51] 2025-12-16 10:04:37,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 11:04:51] 2025-12-16 10:04:51,302 | INFO     | PID=1321675 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 11:04:51] 2025-12-16 10:04:51,303 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 11:04:51] 2025-12-16 10:04:51,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 11:04:51] 2025-12-16 10:04:51,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 11:04:51] 2025-12-16 10:04:51,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 11:04:51] 2025-12-16 10:04:51,303 | CRITICAL | thread 'MainThread' is not alive
[2025-12-16 11:04:51] 2025-12-16 10:04:51,303 | INFO     | [monitor] control thread has ended
[2025-12-16 11:04:51] 2025-12-16 10:04:51,349 [wrapper] ==== pilot stdout END ====
[2025-12-16 11:04:51] 2025-12-16 10:04:51,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 11:04:51] 2025-12-16 10:04:51,354 [wrapper] pilotpid: 1321675
[2025-12-16 11:04:51] 2025-12-16 10:04:51,356 [wrapper] Pilot exit status: 0
[2025-12-16 11:04:51] 2025-12-16 10:04:51,364 [wrapper] pandaids: 6929962776
[2025-12-16 11:04:51] 2025-12-16 10:04:51,379 [wrapper] cleanup supervisor_pilot 1339859 1321676
[2025-12-16 11:04:51] 2025-12-16 10:04:51,381 [wrapper] Test setup, not cleaning
[2025-12-16 11:04:51] 2025-12-16 10:04:51,383 [wrapper] apfmon messages muted
[2025-12-16 11:04:51] 2025-12-16 10:04:51,386 [wrapper] ==== wrapper stdout END ====
[2025-12-16 11:04:51] 2025-12-16 10:04:51,388 [wrapper] ==== wrapper stderr END ====
[2025-12-16 11:04:51]  *** Error codes and diagnostics ***
[2025-12-16 11:04:51]     "exeErrorCode": 0,
[2025-12-16 11:04:51]     "exeErrorDiag": "",
[2025-12-16 11:04:51]     "pilotErrorCode": 0,
[2025-12-16 11:04:51]     "pilotErrorDiag": "",
[2025-12-16 11:04:51]  *** Listing of results directory ***
[2025-12-16 11:04:51] total 339528
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc    579449 Dec 15 19:24 pilot3.tar.gz
[2025-12-16 11:04:51] -rwx------ 1 boinc boinc     36322 Dec 15 19:28 runpilot2-wrapper.sh
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc      5112 Dec 15 19:30 queuedata.json
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc       100 Dec 16 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 11:04:51] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 09:35 run_atlas
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc       105 Dec 16 09:35 job.xml
[2025-12-16 11:04:51] -rw-r--r-- 2 boinc boinc 193266933 Dec 16 09:35 EVNT.47886829._000371.pool.root.1
[2025-12-16 11:04:51] -rw-r--r-- 2 boinc boinc    592415 Dec 16 09:35 input.tar.gz
[2025-12-16 11:04:51] -rw-r--r-- 2 boinc boinc     15847 Dec 16 09:35 start_atlas.sh
[2025-12-16 11:04:51] drwxrwx--x 2 boinc boinc      4096 Dec 16 09:35 shared
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc         0 Dec 16 09:35 boinc_setup_complete
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc      6439 Dec 16 09:35 init_data.xml
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc         0 Dec 16 09:35 boinc_lockfile
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc      2537 Dec 16 09:35 pandaJob.out
[2025-12-16 11:04:51] -rw------- 1 boinc boinc    994528 Dec 16 09:35 agis_schedconf.cvmfs.json
[2025-12-16 11:04:51] -rw------- 1 boinc boinc   1516240 Dec 16 09:35 agis_ddmendpoints.agis.ALL.json
[2025-12-16 11:04:51] drwx------ 5 boinc boinc      4096 Dec 16 09:35 pilot3
[2025-12-16 11:04:51] -rw------- 1 boinc boinc 148459304 Dec 16 11:03 HITS.47886831._009392.pool.root.1
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc       529 Dec 16 11:04 boinc_task_state.xml
[2025-12-16 11:04:51] -rw------- 1 boinc boinc      1018 Dec 16 11:04 memory_monitor_summary.json
[2025-12-16 11:04:51] -rw------- 1 boinc boinc    245641 Dec 16 11:04 log.47886831._009392.job.log.tgz.1
[2025-12-16 11:04:51] -rw------- 1 boinc boinc      7757 Dec 16 11:04 heartbeat.json
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc      8192 Dec 16 11:04 boinc_mmap_file
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc        27 Dec 16 11:04 wrapper_checkpoint.txt
[2025-12-16 11:04:51] -rw------- 1 boinc boinc       817 Dec 16 11:04 pilotlog.txt
[2025-12-16 11:04:51] -rw------- 1 boinc boinc        95 Dec 16 11:04 pilot_heartbeat.json
[2025-12-16 11:04:51] -rw------- 1 boinc boinc    778954 Dec 16 11:04 log.47886831._009392.job.log.1
[2025-12-16 11:04:51] -rw------- 1 boinc boinc       357 Dec 16 11:04 output.list
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc       620 Dec 16 11:04 runtime_log
[2025-12-16 11:04:51] -rw------- 1 boinc boinc   1044480 Dec 16 11:04 result.tar.gz
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc      8897 Dec 16 11:04 runtime_log.err
[2025-12-16 11:04:51] -rw------- 1 boinc boinc       658 Dec 16 11:04 h8oNDm3TSp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmD7TKDmt1oqkm.diag
[2025-12-16 11:04:51] -rw-r--r-- 1 boinc boinc      9315 Dec 16 11:04 stderr.txt
[2025-12-16 11:04:51] HITS file was successfully produced:
[2025-12-16 11:04:51] -rw------- 1 boinc boinc 148459304 Dec 16 11:03 shared/HITS.pool.root.1
[2025-12-16 11:04:51]  *** Contents of shared directory: ***
[2025-12-16 11:04:51] total 335344
[2025-12-16 11:04:51] -rw-r--r-- 2 boinc boinc 193266933 Dec 16 09:35 ATLAS.root_0
[2025-12-16 11:04:51] -rw-r--r-- 2 boinc boinc    592415 Dec 16 09:35 input.tar.gz
[2025-12-16 11:04:51] -rw-r--r-- 2 boinc boinc     15847 Dec 16 09:35 start_atlas.sh
[2025-12-16 11:04:51] -rw------- 1 boinc boinc 148459304 Dec 16 11:03 HITS.pool.root.1
[2025-12-16 11:04:51] -rw------- 1 boinc boinc   1044480 Dec 16 11:04 result.tar.gz
11:04:52 (1317947): run_atlas exited; CPU time 15351.616813
11:04:52 (1317947): called boinc_finish(0)

</stderr_txt>
]]>

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