Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:51:15 (3329946): wrapper (7.7.26015): starting
13:51:15 (3329946): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 13:51:15] Arguments: --nthreads 4
[2025-12-16 13:51:15] Threads: 4
[2025-12-16 13:51:15] Checking for CVMFS
[2025-12-16 13:51:15] No cvmfs_config command found, will try listing directly
[2025-12-16 13:51:15] CVMFS is ok
[2025-12-16 13:51:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 13:51:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 13:51:15] Further information can be found at the LHC@home message board.
[2025-12-16 13:51:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 13:51:15] Checking for apptainer binary...
[2025-12-16 13:51:15] which: no apptainer in ((null))
[2025-12-16 13:51:15] apptainer is not installed, using version from CVMFS
[2025-12-16 13:51:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 13:51:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-12-16 13:51:16] apptainer works
[2025-12-16 13:51:16] Set ATHENA_PROC_NUMBER=4
[2025-12-16 13:51:16] Set ATHENA_CORE_NUMBER=4
[2025-12-16 13:51:16] Starting ATLAS job with PandaID=6929961913
[2025-12-16 13:51:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 18:50:17]  *** The last 200 lines of the pilot log: ***
[2025-12-16 18:50:17] 2025-12-16 17:22:03,998 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 18:50:17] 2025-12-16 17:22:04,825 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 18:50:17] 2025-12-16 17:22:04,836 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2613.102703125001
[2025-12-16 18:50:17] 2025-12-16 17:22:04,849 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6929961913/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 18:50:17] 2025-12-16 17:22:04,850 | INFO     | extracted standard info from prmon json
[2025-12-16 18:50:17] 2025-12-16 17:22:04,851 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 18:50:17] 2025-12-16 17:22:04,851 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 18:50:17] 2025-12-16 17:22:04,851 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 18:50:17] 2025-12-16 17:22:04,851 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 18:50:17] 2025-12-16 17:22:04,857 | INFO     | fitting pss+swap vs Time
[2025-12-16 18:50:17] 2025-12-16 17:22:04,858 | INFO     | sum of square deviations: 5836025702.5
[2025-12-16 18:50:17] 2025-12-16 17:22:04,860 | INFO     | sum of deviations: -30636933898.0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,860 | INFO     | mean x: 1765897598.5
[2025-12-16 18:50:17] 2025-12-16 17:22:04,860 | INFO     | mean y: 2346434.1954887216
[2025-12-16 18:50:17] 2025-12-16 17:22:04,860 | INFO     | intersect: 9272642823.1757
[2025-12-16 18:50:17] 2025-12-16 17:22:04,861 | INFO     | chi2: 2.190215506809964
[2025-12-16 18:50:17] 2025-12-16 17:22:04,861 | INFO     | sum of square deviations: 5513070810.0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,863 | INFO     | sum of deviations: -14795943450.000002
[2025-12-16 18:50:17] 2025-12-16 17:22:04,863 | INFO     | mean x: 1765897446.0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,863 | INFO     | mean y: 2353804.0689655175
[2025-12-16 18:50:17] 2025-12-16 17:22:04,863 | INFO     | intersect: 4741657841.688507
[2025-12-16 18:50:17] 2025-12-16 17:22:04,864 | INFO     | chi2: 1.5268679276149524
[2025-12-16 18:50:17] 2025-12-16 17:22:04,864 | INFO     | current chi2=1.5268679276149524 (change=30.286863422000582 %)
[2025-12-16 18:50:17] 2025-12-16 17:22:04,864 | INFO     | sum of square deviations: 5202255680.0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,866 | INFO     | sum of deviations: -14545894476.5
[2025-12-16 18:50:17] 2025-12-16 17:22:04,866 | INFO     | mean x: 1765897293.5
[2025-12-16 18:50:17] 2025-12-16 17:22:04,866 | INFO     | mean y: 2353926.76953125
[2025-12-16 18:50:17] 2025-12-16 17:22:04,866 | INFO     | intersect: 4939934327.967335
[2025-12-16 18:50:17] 2025-12-16 17:22:04,867 | INFO     | chi2: 1.5259419139043706
[2025-12-16 18:50:17] 2025-12-16 17:22:04,867 | INFO     | current chi2=1.5259419139043706 (change=0.06064792467206023 %)
[2025-12-16 18:50:17] 2025-12-16 17:22:04,867 | INFO     | right removable region: 255
[2025-12-16 18:50:17] 2025-12-16 17:22:04,868 | INFO     | sum of square deviations: 5513070810.0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,869 | INFO     | sum of deviations: -55700205502.99999
[2025-12-16 18:50:17] 2025-12-16 17:22:04,870 | INFO     | mean x: 1765897751.0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,870 | INFO     | mean y: 2358095.509578544
[2025-12-16 18:50:17] 2025-12-16 17:22:04,870 | INFO     | intersect: 17843751942.577816
[2025-12-16 18:50:17] 2025-12-16 17:22:04,870 | INFO     | chi2: 1.010061405695235
[2025-12-16 18:50:17] 2025-12-16 17:22:04,870 | INFO     | current chi2=1.010061405695235 (change=53.88301276496834 %)
[2025-12-16 18:50:17] 2025-12-16 17:22:04,871 | INFO     | sum of square deviations: 5202255680.0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,873 | INFO     | sum of deviations: -43342427295.0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,873 | INFO     | mean x: 1765897903.5
[2025-12-16 18:50:17] 2025-12-16 17:22:04,873 | INFO     | mean y: 2352021.7578125
[2025-12-16 18:50:17] 2025-12-16 17:22:04,873 | INFO     | intersect: 14714874089.270203
[2025-12-16 18:50:17] 2025-12-16 17:22:04,873 | INFO     | chi2: 0.9558511917153407
[2025-12-16 18:50:17] 2025-12-16 17:22:04,874 | INFO     | current chi2=0.9558511917153407 (change=5.3670216161344095 %)
[2025-12-16 18:50:17] 2025-12-16 17:22:04,874 | INFO     | left removable region: 20
[2025-12-16 18:50:17] 2025-12-16 17:22:04,874 | INFO     | sum of square deviations: 4024149870.0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,876 | INFO     | sum of deviations: 206587357.99999973
[2025-12-16 18:50:17] 2025-12-16 17:22:04,876 | INFO     | mean x: 1765897873.0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,876 | INFO     | mean y: 2344418.3276595743
[2025-12-16 18:50:17] 2025-12-16 17:22:04,876 | INFO     | intersect: -88311294.77103996
[2025-12-16 18:50:17] 2025-12-16 17:22:04,876 | INFO     | chi2: 0.06252078758759365
[2025-12-16 18:50:17] 2025-12-16 17:22:04,876 | INFO     | current memory leak: 0.05 B/s (using 235 data points, chi2=0.06)
[2025-12-16 18:50:17] 2025-12-16 17:22:04,877 | INFO     | could have reported an average CPU frequency of 2550 MHz (12 samples)
[2025-12-16 18:50:17] 2025-12-16 17:22:04,877 | INFO     | ..............................
[2025-12-16 18:50:17] 2025-12-16 17:22:04,877 | INFO     | . Timing measurements:
[2025-12-16 18:50:17] 2025-12-16 17:22:04,878 | INFO     | . get job = 0 s
[2025-12-16 18:50:17] 2025-12-16 17:22:04,878 | INFO     | . initial setup = 1 s
[2025-12-16 18:50:17] 2025-12-16 17:22:04,878 | INFO     | . payload setup = 6 s
[2025-12-16 18:50:17] 2025-12-16 17:22:04,878 | INFO     | . stage-in = 0 s
[2025-12-16 18:50:17] 2025-12-16 17:22:04,878 | INFO     | . payload execution = 16196 s
[2025-12-16 18:50:17] 2025-12-16 17:22:04,878 | INFO     | . stage-out = 1 s
[2025-12-16 18:50:17] 2025-12-16 17:22:04,878 | INFO     | . log creation = 0 s
[2025-12-16 18:50:17] 2025-12-16 17:22:04,878 | INFO     | ..............................
[2025-12-16 18:50:17] 2025-12-16 17:22:04,937 | INFO     | time since job start (16237s) is within the limit (174528.0s)
[2025-12-16 18:50:17] 2025-12-16 17:22:04,982 | INFO     | 
[2025-12-16 18:50:17] 2025-12-16 17:22:04,983 | INFO     | job summary report
[2025-12-16 18:50:17] 2025-12-16 17:22:04,983 | INFO     | --------------------------------------------------
[2025-12-16 18:50:17] 2025-12-16 17:22:04,983 | INFO     | PanDA job id: 6929961913
[2025-12-16 18:50:17] 2025-12-16 17:22:04,983 | INFO     | task id: 47898826
[2025-12-16 18:50:17] 2025-12-16 17:22:04,983 | INFO     | errors: (none)
[2025-12-16 18:50:17] 2025-12-16 17:22:04,983 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 18:50:17] 2025-12-16 17:22:04,983 | INFO     | pilot state: finished 
[2025-12-16 18:50:17] 2025-12-16 17:22:04,983 | INFO     | transexitcode: 0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | exeerrorcode: 0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | exeerrordiag: 
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | exitcode: 0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | exitmsg: OK
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | cpuconsumptiontime: 62886 s
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | nevents: 400
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | neventsw: 0
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | pid: 3340869
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | pgrp: 3340869
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | corecount: 4
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | event service: False
[2025-12-16 18:50:17] 2025-12-16 17:22:04,984 | INFO     | sizes: {0: 2283973, 5: 2284235, 11: 2284291, 16206: 2315557, 16208: 2324577, 16212: 2324633, 16221: 2324955}
[2025-12-16 18:50:17] 2025-12-16 17:22:04,985 | INFO     | --------------------------------------------------
[2025-12-16 18:50:17] 2025-12-16 17:22:04,985 | INFO     | 
[2025-12-16 18:50:17] 2025-12-16 17:22:04,985 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-12-16 18:50:17] 2025-12-16 17:22:05,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,007 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,008 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,008 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 18:50:17] 2025-12-16 17:22:05,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,008 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 18:50:17] 2025-12-16 17:22:05,009 | INFO     | job 6929961913 has completed (purged errors)
[2025-12-16 18:50:17] 2025-12-16 17:22:05,009 | INFO     | overall cleanup function is called
[2025-12-16 18:50:17] 2025-12-16 17:22:06,017 | INFO     | --- collectZombieJob: --- 10, [3340869]
[2025-12-16 18:50:17] 2025-12-16 17:22:06,017 | INFO     | zombie collector waiting for pid 3340869
[2025-12-16 18:50:17] 2025-12-16 17:22:06,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 18:50:17] 2025-12-16 17:22:06,017 | INFO     | collected zombie processes
[2025-12-16 18:50:17] 2025-12-16 17:22:06,017 | INFO     | will attempt to kill all subprocesses of pid=3340869
[2025-12-16 18:50:17] 2025-12-16 17:22:06,402 | INFO     | process IDs to be killed: [3340869] (in reverse order)
[2025-12-16 18:50:17] 2025-12-16 17:22:06,524 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 18:50:17] 2025-12-16 17:22:06,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 18:50:17] 2025-12-16 17:22:06,539 | INFO     | did not find any defunct processes belonging to 3340869
[2025-12-16 18:50:17] 2025-12-16 17:22:06,553 | INFO     | did not find any defunct processes belonging to 3340869
[2025-12-16 18:50:17] 2025-12-16 17:22:06,553 | INFO     | ready for new job
[2025-12-16 18:50:17] 2025-12-16 17:22:06,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 18:50:17] 2025-12-16 17:22:06,556 | INFO     | ***************************************
[2025-12-16 18:50:17] 2025-12-16 17:22:06,556 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 18:50:17] 2025-12-16 17:22:06,556 | INFO     | ***************************************
[2025-12-16 18:50:17] 2025-12-16 17:22:06,557 | INFO     | 
[2025-12-16 18:50:17] 2025-12-16 17:22:06,561 | INFO     | architecture information:
[2025-12-16 18:50:17] 2025-12-16 17:22:06,561 | INFO     | executing command: cat /etc/os-release
[2025-12-16 18:50:17] 2025-12-16 17:22:06,578 | INFO     | cat /etc/os-release:
[2025-12-16 18:50:17] NAME="CentOS Linux"
[2025-12-16 18:50:17] VERSION="7 (Core)"
[2025-12-16 18:50:17] ID="centos"
[2025-12-16 18:50:17] ID_LIKE="rhel fedora"
[2025-12-16 18:50:17] VERSION_ID="7"
[2025-12-16 18:50:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 18:50:17] ANSI_COLOR="0;31"
[2025-12-16 18:50:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 18:50:17] HOME_URL="https://www.centos.org/"
[2025-12-16 18:50:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 18:50:17] 
[2025-12-16 18:50:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 18:50:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 18:50:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 18:50:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 18:50:17] 
[2025-12-16 18:50:17] 2025-12-16 17:22:06,578 | INFO     | ***************************************
[2025-12-16 18:50:17] 2025-12-16 17:22:07,081 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-12-16 18:50:17] 2025-12-16 17:22:07,100 | INFO     | sufficient remaining disk space (640614924288 B)
[2025-12-16 18:50:17] 2025-12-16 17:22:07,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 18:50:17] 2025-12-16 17:22:07,101 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 18:50:17] 2025-12-16 17:22:07,101 | INFO     | update_server=False
[2025-12-16 18:50:17] 2025-12-16 17:22:07,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 18:50:17] 2025-12-16 17:22:07,151 | INFO     | all payload control threads have been joined
[2025-12-16 18:50:17] 2025-12-16 17:22:07,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 18:50:17] 2025-12-16 17:22:07,504 | INFO     | aborting loop
[2025-12-16 18:50:17] 2025-12-16 17:22:07,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 18:50:17] 2025-12-16 17:22:08,107 | INFO     | [job] retrieve thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:08,108 | INFO     | [data] copytool_in thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:08,156 | INFO     | [payload] control thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:08,165 | INFO     | all data control threads have been joined
[2025-12-16 18:50:17] 2025-12-16 17:22:08,475 | INFO     | [job] validate thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:08,509 | INFO     | [job] job monitor thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:08,573 | INFO     | all job control threads have been joined
[2025-12-16 18:50:17] 2025-12-16 17:22:08,748 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:08,902 | INFO     | [payload] validate_post thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:08,969 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:08,981 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:09,170 | INFO     | [data] control thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:09,253 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:09,575 | INFO     | [payload] failed_post thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:09,576 | INFO     | [job] control thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:09,869 | INFO     | [data] copytool_out thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:09,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 18:50:17] 2025-12-16 17:22:10,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 18:50:17] 2025-12-16 17:22:10,998 | INFO     | [job] queue monitor thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:14,502 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 18:50:17] 2025-12-16 17:22:38,526 | INFO     | PID=3333702 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 18:50:17] 2025-12-16 17:22:38,526 | INFO     | .. there are 5 such processes running
[2025-12-16 18:50:17] 2025-12-16 17:22:38,527 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 18:50:17] 2025-12-16 17:22:38,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 18:50:17] 2025-12-16 17:22:38,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 18:50:17] 2025-12-16 17:22:53,924 | INFO     | [monitor] cgroup control has ended
[2025-12-16 18:50:17] 2025-12-16 17:22:54,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22657716733760)>', '<ExcThread(monitor, started 22657474979584)>']
[2025-12-16 18:50:17] 2025-12-16 17:22:55,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 18:50:17] 2025-12-16 17:22:55,613 | INFO     | [monitor] control thread has ended
[2025-12-16 18:50:17] 2025-12-16 17:22:59,954 | INFO     | all workflow threads have been joined
[2025-12-16 18:50:17] 2025-12-16 17:22:59,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 18:50:17] 2025-12-16 17:22:59,954 | INFO     | traces error code: 0
[2025-12-16 18:50:17] 2025-12-16 17:22:59,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 18:50:17] 2025-12-16 17:23:00,160 [wrapper] ==== pilot stdout END ====
[2025-12-16 18:50:17] 2025-12-16 17:23:00,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 18:50:17] 2025-12-16 17:23:00,167 [wrapper] pilotpid: 3333702
[2025-12-16 18:50:17] 2025-12-16 17:23:00,170 [wrapper] Pilot exit status: 0
[2025-12-16 18:50:17] 2025-12-16 17:23:00,181 [wrapper] pandaids: 6929961913
[2025-12-16 18:50:17] 2025-12-16 17:23:00,260 [wrapper] cleanup supervisor_pilot 3643156 3333703
[2025-12-16 18:50:17] 2025-12-16 17:23:00,263 [wrapper] Test setup, not cleaning
[2025-12-16 18:50:17] 2025-12-16 17:23:00,266 [wrapper] apfmon messages muted
[2025-12-16 18:50:17] 2025-12-16 17:23:00,269 [wrapper] ==== wrapper stdout END ====
[2025-12-16 18:50:17] 2025-12-16 17:23:00,272 [wrapper] ==== wrapper stderr END ====
[2025-12-16 18:50:17]  *** Error codes and diagnostics ***
[2025-12-16 18:50:17]     "exeErrorCode": 0,
[2025-12-16 18:50:17]     "exeErrorDiag": "",
[2025-12-16 18:50:17]     "pilotErrorCode": 0,
[2025-12-16 18:50:17]     "pilotErrorDiag": "",
[2025-12-16 18:50:17]  *** Listing of results directory ***
[2025-12-16 18:50:17] total 442484
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc    579449 Dec 15 19:24 pilot3.tar.gz
[2025-12-16 18:50:17] -rwx------ 1 boinc boinc     36322 Dec 15 19:26 runpilot2-wrapper.sh
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc      5112 Dec 15 19:27 queuedata.json
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc       100 Dec 16 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 18:50:17] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 13:51 run_atlas
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc       105 Dec 16 13:51 job.xml
[2025-12-16 18:50:17] -rw-r--r-- 2 boinc boinc 222212886 Dec 16 13:51 EVNT.47898824._000174.pool.root.1
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc      6639 Dec 16 13:51 init_data.xml
[2025-12-16 18:50:17] -rw-r--r-- 2 boinc boinc     15847 Dec 16 13:51 start_atlas.sh
[2025-12-16 18:50:17] drwxrwx--x 2 boinc boinc      4096 Dec 16 13:51 shared
[2025-12-16 18:50:17] -rw-r--r-- 2 boinc boinc    592387 Dec 16 13:51 input.tar.gz
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc         0 Dec 16 13:51 boinc_lockfile
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc      2514 Dec 16 13:51 pandaJob.out
[2025-12-16 18:50:17] -rw------- 1 boinc boinc    990993 Dec 16 13:51 agis_schedconf.cvmfs.json
[2025-12-16 18:50:17] drwx------ 5 boinc boinc      4096 Dec 16 13:51 pilot3
[2025-12-16 18:50:17] -rw------- 1 boinc boinc 221537464 Dec 16 18:21 HITS.47898826._002897.pool.root.1
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc       529 Dec 16 18:21 boinc_task_state.xml
[2025-12-16 18:50:17] -rw------- 1 boinc boinc      1034 Dec 16 18:21 memory_monitor_summary.json
[2025-12-16 18:50:17] -rw------- 1 boinc boinc   1516240 Dec 16 18:21 agis_ddmendpoints.agis.ALL.json
[2025-12-16 18:50:17] -rw------- 1 boinc boinc    443279 Dec 16 18:21 log.47898826._002897.job.log.tgz.1
[2025-12-16 18:50:17] -rw------- 1 boinc boinc      7824 Dec 16 18:22 heartbeat.json
[2025-12-16 18:50:17] -rw------- 1 boinc boinc        95 Dec 16 18:22 pilot_heartbeat.json
[2025-12-16 18:50:17] -rw------- 1 boinc boinc      4833 Dec 16 18:22 pilotlog.txt
[2025-12-16 18:50:17] -rw------- 1 boinc boinc   2274541 Dec 16 18:23 log.47898826._002897.job.log.1
[2025-12-16 18:50:17] -rw------- 1 boinc boinc       357 Dec 16 18:23 output.list
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc       620 Dec 16 18:23 runtime_log
[2025-12-16 18:50:17] -rw------- 1 boinc boinc   2734080 Dec 16 18:23 result.tar.gz
[2025-12-16 18:50:17] -rw------- 1 boinc boinc       666 Dec 16 18:23 yu0MDmxRSp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfXYKDmKojNRm.diag
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc      9206 Dec 16 18:23 runtime_log.err
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc        26 Dec 16 18:50 wrapper_checkpoint.txt
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc      8192 Dec 16 18:50 boinc_mmap_file
[2025-12-16 18:50:17] -rw-r--r-- 1 boinc boinc     20888 Dec 16 18:50 stderr.txt
[2025-12-16 18:50:17] HITS file was successfully produced:
[2025-12-16 18:50:17] -rw------- 1 boinc boinc 221537464 Dec 16 18:21 shared/HITS.pool.root.1
[2025-12-16 18:50:17]  *** Contents of shared directory: ***
[2025-12-16 18:50:17] total 436632
[2025-12-16 18:50:17] -rw-r--r-- 2 boinc boinc 222212886 Dec 16 13:51 ATLAS.root_0
[2025-12-16 18:50:17] -rw-r--r-- 2 boinc boinc     15847 Dec 16 13:51 start_atlas.sh
[2025-12-16 18:50:17] -rw-r--r-- 2 boinc boinc    592387 Dec 16 13:51 input.tar.gz
[2025-12-16 18:50:17] -rw------- 1 boinc boinc 221537464 Dec 16 18:21 HITS.pool.root.1
[2025-12-16 18:50:17] -rw------- 1 boinc boinc   2734080 Dec 16 18:23 result.tar.gz
18:50:19 (3329946): run_atlas exited; CPU time 63600.598169
18:50:19 (3329946): called boinc_finish(0)

</stderr_txt>
]]>

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