Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:22:34 (3901135): wrapper (7.7.26015): starting
22:22:34 (3901135): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 22:22:34] Arguments: --nthreads 4
[2025-12-16 22:22:34] Threads: 4
[2025-12-16 22:22:34] Checking for CVMFS
[2025-12-16 22:22:34] No cvmfs_config command found, will try listing directly
[2025-12-16 22:22:34] CVMFS is ok
[2025-12-16 22:22:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 22:22:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 22:22:34] Further information can be found at the LHC@home message board.
[2025-12-16 22:22:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 22:22:34] Checking for apptainer binary...
[2025-12-16 22:22:34] which: no apptainer in ((null))
[2025-12-16 22:22:34] apptainer is not installed, using version from CVMFS
[2025-12-16 22:22:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 22:22:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-12-16 22:22:34] apptainer works
[2025-12-16 22:22:34] Set ATHENA_PROC_NUMBER=4
[2025-12-16 22:22:34] Set ATHENA_CORE_NUMBER=4
[2025-12-16 22:22:34] Starting ATLAS job with PandaID=6929961385
[2025-12-16 22:22:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 01:43:22]  *** The last 200 lines of the pilot log: ***
[2025-12-17 01:43:22] 2025-12-17 00:40:12,374 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 01:43:22] 2025-12-17 00:40:12,847 | INFO     | time since job start (11847s) is within the limit (174528.0s)
[2025-12-17 01:43:22] 2025-12-17 00:40:12,847 | INFO     | 11848s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-17 01:43:22] 2025-12-17 00:40:13,601 | INFO     | monitor loop #857: job 0:6929961385 is in state 'finished'
[2025-12-17 01:43:22] 2025-12-17 00:40:13,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 01:43:22] 2025-12-17 00:40:14,853 | INFO     | time since job start (11849s) is within the limit (174528.0s)
[2025-12-17 01:43:22] 2025-12-17 00:40:16,104 | INFO     | monitor loop #858: job 0:6929961385 is in state 'finished'
[2025-12-17 01:43:22] 2025-12-17 00:40:16,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 01:43:22] 2025-12-17 00:40:16,798 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 01:43:22] 2025-12-17 00:40:16,808 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2634.68528125
[2025-12-17 01:43:22] 2025-12-17 00:40:16,820 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6929961385/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 01:43:22] 2025-12-17 00:40:16,821 | INFO     | extracted standard info from prmon json
[2025-12-17 01:43:22] 2025-12-17 00:40:16,821 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 01:43:22] 2025-12-17 00:40:16,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 01:43:22] 2025-12-17 00:40:16,822 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 01:43:22] 2025-12-17 00:40:16,822 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 01:43:22] 2025-12-17 00:40:16,826 | INFO     | fitting pss+swap vs Time
[2025-12-17 01:43:22] 2025-12-17 00:40:16,826 | INFO     | sum of square deviations: 2263977332.5
[2025-12-17 01:43:22] 2025-12-17 00:40:16,828 | INFO     | sum of deviations: -46137710174.49999
[2025-12-17 01:43:22] 2025-12-17 00:40:16,828 | INFO     | mean x: 1765926080.5
[2025-12-17 01:43:22] 2025-12-17 00:40:16,828 | INFO     | mean y: 2399705.0463917525
[2025-12-17 01:43:22] 2025-12-17 00:40:16,828 | INFO     | intersect: 35990297870.85091
[2025-12-17 01:43:22] 2025-12-17 00:40:16,828 | INFO     | chi2: 1.5687354280172068
[2025-12-17 01:43:22] 2025-12-17 00:40:16,829 | INFO     | sum of square deviations: 2093397390.0
[2025-12-17 01:43:22] 2025-12-17 00:40:16,830 | INFO     | sum of deviations: -44250243203.00002
[2025-12-17 01:43:22] 2025-12-17 00:40:16,830 | INFO     | mean x: 1765925928.0
[2025-12-17 01:43:22] 2025-12-17 00:40:16,830 | INFO     | mean y: 2401392.8306878307
[2025-12-17 01:43:22] 2025-12-17 00:40:16,830 | INFO     | intersect: 37330551397.10843
[2025-12-17 01:43:22] 2025-12-17 00:40:16,830 | INFO     | chi2: 1.562715583573262
[2025-12-17 01:43:22] 2025-12-17 00:40:16,831 | INFO     | current chi2=1.562715583573262 (change=0.38373866851171395 %)
[2025-12-17 01:43:22] 2025-12-17 00:40:16,831 | INFO     | right removable region: 188
[2025-12-17 01:43:22] 2025-12-17 00:40:16,831 | INFO     | sum of square deviations: 2093397390.0
[2025-12-17 01:43:22] 2025-12-17 00:40:16,832 | INFO     | sum of deviations: -67652282471.00001
[2025-12-17 01:43:22] 2025-12-17 00:40:16,832 | INFO     | mean x: 1765926233.0
[2025-12-17 01:43:22] 2025-12-17 00:40:16,832 | INFO     | mean y: 2418621.417989418
[2025-12-17 01:43:22] 2025-12-17 00:40:16,832 | INFO     | intersect: 57071822122.42502
[2025-12-17 01:43:22] 2025-12-17 00:40:16,833 | INFO     | chi2: 0.2926632487449317
[2025-12-17 01:43:22] 2025-12-17 00:40:16,833 | INFO     | current chi2=0.2926632487449317 (change=81.34400208486133 %)
[2025-12-17 01:43:22] 2025-12-17 00:40:16,833 | INFO     | sum of square deviations: 1931608310.0
[2025-12-17 01:43:22] 2025-12-17 00:40:16,834 | INFO     | sum of deviations: -61899726972.5
[2025-12-17 01:43:22] 2025-12-17 00:40:16,834 | INFO     | mean x: 1765926385.5
[2025-12-17 01:43:22] 2025-12-17 00:40:16,834 | INFO     | mean y: 2413180.722826087
[2025-12-17 01:43:22] 2025-12-17 00:40:16,835 | INFO     | intersect: 56592748058.70012
[2025-12-17 01:43:22] 2025-12-17 00:40:16,835 | INFO     | chi2: 0.29004814230627624
[2025-12-17 01:43:22] 2025-12-17 00:40:16,835 | INFO     | current chi2=0.29004814230627624 (change=0.8935547766486572 %)
[2025-12-17 01:43:22] 2025-12-17 00:40:16,835 | INFO     | left removable region: 20
[2025-12-17 01:43:22] 2025-12-17 00:40:16,835 | INFO     | sum of square deviations: 1470248962.0
[2025-12-17 01:43:22] 2025-12-17 00:40:16,836 | INFO     | sum of deviations: -45329979985.999985
[2025-12-17 01:43:22] 2025-12-17 00:40:16,837 | INFO     | mean x: 1765926507.5
[2025-12-17 01:43:22] 2025-12-17 00:40:16,837 | INFO     | mean y: 2400457.773809524
[2025-12-17 01:43:22] 2025-12-17 00:40:16,837 | INFO     | intersect: 54448562509.69563
[2025-12-17 01:43:22] 2025-12-17 00:40:16,837 | INFO     | chi2: 0.2654619126348798
[2025-12-17 01:43:22] 2025-12-17 00:40:16,837 | INFO     | current memory leak: -30.83 B/s (using 168 data points, chi2=0.27)
[2025-12-17 01:43:22] 2025-12-17 00:40:16,838 | INFO     | could have reported an average CPU frequency of 2562 MHz (10 samples)
[2025-12-17 01:43:22] 2025-12-17 00:40:16,838 | INFO     | ..............................
[2025-12-17 01:43:22] 2025-12-17 00:40:16,838 | INFO     | . Timing measurements:
[2025-12-17 01:43:22] 2025-12-17 00:40:16,838 | INFO     | . get job = 0 s
[2025-12-17 01:43:22] 2025-12-17 00:40:16,838 | INFO     | . initial setup = 1 s
[2025-12-17 01:43:22] 2025-12-17 00:40:16,838 | INFO     | . payload setup = 6 s
[2025-12-17 01:43:22] 2025-12-17 00:40:16,838 | INFO     | . stage-in = 0 s
[2025-12-17 01:43:22] 2025-12-17 00:40:16,838 | INFO     | . payload execution = 11813 s
[2025-12-17 01:43:22] 2025-12-17 00:40:16,839 | INFO     | . stage-out = 1 s
[2025-12-17 01:43:22] 2025-12-17 00:40:16,839 | INFO     | . log creation = 0 s
[2025-12-17 01:43:22] 2025-12-17 00:40:16,839 | INFO     | ..............................
[2025-12-17 01:43:22] 2025-12-17 00:40:16,864 | INFO     | time since job start (11851s) is within the limit (174528.0s)
[2025-12-17 01:43:22] 2025-12-17 00:40:17,009 | INFO     | 
[2025-12-17 01:43:22] 2025-12-17 00:40:17,009 | INFO     | job summary report
[2025-12-17 01:43:22] 2025-12-17 00:40:17,009 | INFO     | --------------------------------------------------
[2025-12-17 01:43:22] 2025-12-17 00:40:17,009 | INFO     | PanDA job id: 6929961385
[2025-12-17 01:43:22] 2025-12-17 00:40:17,009 | INFO     | task id: 47886831
[2025-12-17 01:43:22] 2025-12-17 00:40:17,009 | INFO     | errors: (none)
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | pilot state: finished 
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | transexitcode: 0
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | exeerrorcode: 0
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | exeerrordiag: 
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | exitcode: 0
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | exitmsg: OK
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | cpuconsumptiontime: 45684 s
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | nevents: 400
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | neventsw: 0
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | pid: 3911848
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | pgrp: 3911848
[2025-12-17 01:43:22] 2025-12-17 00:40:17,010 | INFO     | corecount: 4
[2025-12-17 01:43:22] 2025-12-17 00:40:17,011 | INFO     | event service: False
[2025-12-17 01:43:22] 2025-12-17 00:40:17,011 | INFO     | sizes: {0: 2284001, 1: 2284001, 5: 2284291, 11: 2284347, 11823: 2313695, 11825: 2322715, 11828: 2322899, 11835: 2323093}
[2025-12-17 01:43:22] 2025-12-17 00:40:17,011 | INFO     | --------------------------------------------------
[2025-12-17 01:43:22] 2025-12-17 00:40:17,011 | INFO     | 
[2025-12-17 01:43:22] 2025-12-17 00:40:17,011 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-12-17 01:43:22] 2025-12-17 00:40:17,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,037 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 01:43:22] 2025-12-17 00:40:17,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,037 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 01:43:22] 2025-12-17 00:40:17,037 | INFO     | job 6929961385 has completed (purged errors)
[2025-12-17 01:43:22] 2025-12-17 00:40:17,037 | INFO     | overall cleanup function is called
[2025-12-17 01:43:22] 2025-12-17 00:40:18,042 | INFO     | --- collectZombieJob: --- 10, [3911848]
[2025-12-17 01:43:22] 2025-12-17 00:40:18,042 | INFO     | zombie collector waiting for pid 3911848
[2025-12-17 01:43:22] 2025-12-17 00:40:18,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 01:43:22] 2025-12-17 00:40:18,043 | INFO     | collected zombie processes
[2025-12-17 01:43:22] 2025-12-17 00:40:18,044 | INFO     | will attempt to kill all subprocesses of pid=3911848
[2025-12-17 01:43:22] 2025-12-17 00:40:18,428 | INFO     | process IDs to be killed: [3911848] (in reverse order)
[2025-12-17 01:43:22] 2025-12-17 00:40:18,550 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 01:43:22] 2025-12-17 00:40:18,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 01:43:22] 2025-12-17 00:40:18,567 | INFO     | did not find any defunct processes belonging to 3911848
[2025-12-17 01:43:22] 2025-12-17 00:40:18,582 | INFO     | did not find any defunct processes belonging to 3911848
[2025-12-17 01:43:22] 2025-12-17 00:40:18,582 | INFO     | ready for new job
[2025-12-17 01:43:22] 2025-12-17 00:40:18,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 01:43:22] 2025-12-17 00:40:18,585 | INFO     | ***************************************
[2025-12-17 01:43:22] 2025-12-17 00:40:18,585 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 01:43:22] 2025-12-17 00:40:18,585 | INFO     | ***************************************
[2025-12-17 01:43:22] 2025-12-17 00:40:18,585 | INFO     | 
[2025-12-17 01:43:22] 2025-12-17 00:40:18,589 | INFO     | architecture information:
[2025-12-17 01:43:22] 2025-12-17 00:40:18,590 | INFO     | executing command: cat /etc/os-release
[2025-12-17 01:43:22] 2025-12-17 00:40:18,607 | INFO     | cat /etc/os-release:
[2025-12-17 01:43:22] NAME="CentOS Linux"
[2025-12-17 01:43:22] VERSION="7 (Core)"
[2025-12-17 01:43:22] ID="centos"
[2025-12-17 01:43:22] ID_LIKE="rhel fedora"
[2025-12-17 01:43:22] VERSION_ID="7"
[2025-12-17 01:43:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 01:43:22] ANSI_COLOR="0;31"
[2025-12-17 01:43:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 01:43:22] HOME_URL="https://www.centos.org/"
[2025-12-17 01:43:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 01:43:22] 
[2025-12-17 01:43:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 01:43:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 01:43:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 01:43:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 01:43:22] 
[2025-12-17 01:43:22] 2025-12-17 00:40:18,607 | INFO     | ***************************************
[2025-12-17 01:43:22] 2025-12-17 00:40:19,110 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-12-17 01:43:22] 2025-12-17 00:40:19,124 | INFO     | sufficient remaining disk space (637046620160 B)
[2025-12-17 01:43:22] 2025-12-17 00:40:19,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 01:43:22] 2025-12-17 00:40:19,125 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 01:43:22] 2025-12-17 00:40:19,125 | INFO     | update_server=False
[2025-12-17 01:43:22] 2025-12-17 00:40:19,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 01:43:22] 2025-12-17 00:40:19,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 01:43:22] 2025-12-17 00:40:19,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 01:43:22] 2025-12-17 00:40:19,620 | INFO     | aborting loop
[2025-12-17 01:43:22] 2025-12-17 00:40:19,749 | INFO     | all data control threads have been joined
[2025-12-17 01:43:22] 2025-12-17 00:40:20,130 | INFO     | [job] retrieve thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:20,216 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:20,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:20,375 | INFO     | all payload control threads have been joined
[2025-12-17 01:43:22] 2025-12-17 00:40:20,517 | INFO     | [data] copytool_in thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:20,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 01:43:22] 2025-12-17 00:40:20,595 | INFO     | [payload] validate_post thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:20,625 | INFO     | [job] job monitor thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:20,755 | INFO     | [data] control thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:20,784 | INFO     | all job control threads have been joined
[2025-12-17 01:43:22] 2025-12-17 00:40:20,907 | INFO     | [payload] failed_post thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:21,063 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:21,176 | INFO     | [job] validate thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:21,380 | INFO     | [payload] control thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:21,521 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:21,550 | INFO     | [data] copytool_out thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:21,789 | INFO     | [job] control thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:21,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 01:43:22] 2025-12-17 00:40:22,944 | INFO     | [job] queue monitor thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:24,542 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 01:43:22] 2025-12-17 00:40:50,449 | INFO     | PID=3904883 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 01:43:22] 2025-12-17 00:40:50,450 | INFO     | .. there are 5 such processes running
[2025-12-17 01:43:22] 2025-12-17 00:40:50,450 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 01:43:22] 2025-12-17 00:40:50,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 01:43:22] 2025-12-17 00:40:50,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 01:43:22] 2025-12-17 00:41:04,722 | INFO     | [monitor] cgroup control has ended
[2025-12-17 01:43:22] 2025-12-17 00:41:05,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22823695329088)>', '<ExcThread(monitor, started 22823460378368)>']
[2025-12-17 01:43:22] 2025-12-17 00:41:06,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 01:43:22] 2025-12-17 00:41:06,531 | INFO     | [monitor] control thread has ended
[2025-12-17 01:43:22] 2025-12-17 00:41:10,635 | INFO     | all workflow threads have been joined
[2025-12-17 01:43:22] 2025-12-17 00:41:10,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 01:43:22] 2025-12-17 00:41:10,635 | INFO     | traces error code: 0
[2025-12-17 01:43:22] 2025-12-17 00:41:10,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 01:43:22] 2025-12-17 00:41:10,782 [wrapper] ==== pilot stdout END ====
[2025-12-17 01:43:22] 2025-12-17 00:41:10,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 01:43:22] 2025-12-17 00:41:10,789 [wrapper] pilotpid: 3904883
[2025-12-17 01:43:22] 2025-12-17 00:41:10,791 [wrapper] Pilot exit status: 0
[2025-12-17 01:43:22] 2025-12-17 00:41:10,802 [wrapper] pandaids: 6929961385
[2025-12-17 01:43:22] 2025-12-17 00:41:10,888 [wrapper] cleanup supervisor_pilot 4098299 3904884
[2025-12-17 01:43:22] 2025-12-17 00:41:10,891 [wrapper] Test setup, not cleaning
[2025-12-17 01:43:22] 2025-12-17 00:41:10,894 [wrapper] apfmon messages muted
[2025-12-17 01:43:22] 2025-12-17 00:41:10,897 [wrapper] ==== wrapper stdout END ====
[2025-12-17 01:43:22] 2025-12-17 00:41:10,899 [wrapper] ==== wrapper stderr END ====
[2025-12-17 01:43:22]  *** Error codes and diagnostics ***
[2025-12-17 01:43:22]     "exeErrorCode": 0,
[2025-12-17 01:43:22]     "exeErrorDiag": "",
[2025-12-17 01:43:22]     "pilotErrorCode": 0,
[2025-12-17 01:43:22]     "pilotErrorDiag": "",
[2025-12-17 01:43:22]  *** Listing of results directory ***
[2025-12-17 01:43:22] total 345504
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc    579449 Dec 15 19:24 pilot3.tar.gz
[2025-12-17 01:43:22] -rwx------ 1 boinc boinc     36322 Dec 15 19:28 runpilot2-wrapper.sh
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc      5112 Dec 15 19:30 queuedata.json
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc       100 Dec 16 22:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 01:43:22] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 22:22 run_atlas
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc       105 Dec 16 22:22 job.xml
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc      6639 Dec 16 22:22 init_data.xml
[2025-12-17 01:43:22] -rw-r--r-- 2 boinc boinc 193863155 Dec 16 22:22 EVNT.47886829._000340.pool.root.1
[2025-12-17 01:43:22] -rw-r--r-- 2 boinc boinc     15847 Dec 16 22:22 start_atlas.sh
[2025-12-17 01:43:22] drwxrwx--x 2 boinc boinc      4096 Dec 16 22:22 shared
[2025-12-17 01:43:22] -rw-r--r-- 2 boinc boinc    592417 Dec 16 22:22 input.tar.gz
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc         0 Dec 16 22:22 boinc_lockfile
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc      2538 Dec 16 22:22 pandaJob.out
[2025-12-17 01:43:22] -rw------- 1 boinc boinc    987401 Dec 16 22:22 agis_schedconf.cvmfs.json
[2025-12-17 01:43:22] drwx------ 5 boinc boinc      4096 Dec 16 22:22 pilot3
[2025-12-17 01:43:22] -rw------- 1 boinc boinc 151924851 Dec 17 01:39 HITS.47886831._008923.pool.root.1
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc       528 Dec 17 01:39 boinc_task_state.xml
[2025-12-17 01:43:22] -rw------- 1 boinc boinc      1035 Dec 17 01:40 memory_monitor_summary.json
[2025-12-17 01:43:22] -rw------- 1 boinc boinc   1516240 Dec 17 01:40 agis_ddmendpoints.agis.ALL.json
[2025-12-17 01:43:22] -rw------- 1 boinc boinc    367852 Dec 17 01:40 log.47886831._008923.job.log.tgz.1
[2025-12-17 01:43:22] -rw------- 1 boinc boinc        95 Dec 17 01:40 pilot_heartbeat.json
[2025-12-17 01:43:22] -rw------- 1 boinc boinc      7832 Dec 17 01:40 heartbeat.json
[2025-12-17 01:43:22] -rw------- 1 boinc boinc      4833 Dec 17 01:41 pilotlog.txt
[2025-12-17 01:43:22] -rw------- 1 boinc boinc   1677507 Dec 17 01:41 log.47886831._008923.job.log.1
[2025-12-17 01:43:22] -rw------- 1 boinc boinc       357 Dec 17 01:41 output.list
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc       620 Dec 17 01:41 runtime_log
[2025-12-17 01:43:22] -rw------- 1 boinc boinc   2068480 Dec 17 01:41 result.tar.gz
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc      9206 Dec 17 01:41 runtime_log.err
[2025-12-17 01:43:22] -rw------- 1 boinc boinc       666 Dec 17 01:41 B4ELDmtTSp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm85TKDmYBd0Un.diag
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc        26 Dec 17 01:43 wrapper_checkpoint.txt
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc      8192 Dec 17 01:43 boinc_mmap_file
[2025-12-17 01:43:22] -rw-r--r-- 1 boinc boinc     21234 Dec 17 01:43 stderr.txt
[2025-12-17 01:43:22] HITS file was successfully produced:
[2025-12-17 01:43:22] -rw------- 1 boinc boinc 151924851 Dec 17 01:39 shared/HITS.pool.root.1
[2025-12-17 01:43:22]  *** Contents of shared directory: ***
[2025-12-17 01:43:22] total 340312
[2025-12-17 01:43:22] -rw-r--r-- 2 boinc boinc 193863155 Dec 16 22:22 ATLAS.root_0
[2025-12-17 01:43:22] -rw-r--r-- 2 boinc boinc     15847 Dec 16 22:22 start_atlas.sh
[2025-12-17 01:43:22] -rw-r--r-- 2 boinc boinc    592417 Dec 16 22:22 input.tar.gz
[2025-12-17 01:43:22] -rw------- 1 boinc boinc 151924851 Dec 17 01:39 HITS.pool.root.1
[2025-12-17 01:43:22] -rw------- 1 boinc boinc   2068480 Dec 17 01:41 result.tar.gz
01:43:24 (3901135): run_atlas exited; CPU time 46178.117524
01:43:24 (3901135): called boinc_finish(0)

</stderr_txt>
]]>

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