Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:11:01 (2464168): wrapper (7.7.26015): starting
23:11:01 (2464168): wrapper: running run_atlas (--nthreads 9)
[2025-12-15 23:11:01] Arguments: --nthreads 9
[2025-12-15 23:11:01] Threads: 9
[2025-12-15 23:11:01] Checking for CVMFS
[2025-12-15 23:11:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 23:11:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 23:11:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 23:11:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 23:11:03] 2.13.2.0 9379 62072 247164 154056 1 316 34170999 39288832 10482 16776704 0 57647420 99.566 71750592 37199 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 23:11:03] CVMFS is ok
[2025-12-15 23:11:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 23:11:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 23:11:03] Further information can be found at the LHC@home message board.
[2025-12-15 23:11:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 23:11:03] Checking for apptainer binary...
[2025-12-15 23:11:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 23:11:03] Running /usr/bin/apptainer --version
[2025-12-15 23:11:03] apptainer version 1.4.4-1.el9
[2025-12-15 23:11:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 23:11:04] c-210-19.aglt2.org
[2025-12-15 23:11:04] apptainer works
[2025-12-15 23:11:04] Set ATHENA_PROC_NUMBER=9
[2025-12-15 23:11:04] Set ATHENA_CORE_NUMBER=9
[2025-12-15 23:11:04] Starting ATLAS job with PandaID=6929961266
[2025-12-15 23:11:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 04:17:25]  *** The last 200 lines of the pilot log: ***
[2025-12-16 04:17:25] 2025-12-16 09:16:14,964 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929961266/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 04:17:25] 2025-12-16 09:16:14,964 | INFO     | extracted standard info from prmon json
[2025-12-16 04:17:25] 2025-12-16 09:16:14,964 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 04:17:25] 2025-12-16 09:16:14,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 04:17:25] 2025-12-16 09:16:14,965 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 04:17:25] 2025-12-16 09:16:14,965 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 04:17:25] 2025-12-16 09:16:14,971 | INFO     | fitting pss+swap vs Time
[2025-12-16 04:17:25] 2025-12-16 09:16:14,971 | INFO     | sum of square deviations: 8205074828.580559
[2025-12-16 04:17:25] 2025-12-16 09:16:14,974 | INFO     | sum of deviations: 127758314619.329
[2025-12-16 04:17:25] 2025-12-16 09:16:14,974 | INFO     | mean x: 1765867455.3590603
[2025-12-16 04:17:25] 2025-12-16 09:16:14,974 | INFO     | mean y: 2488511.174496644
[2025-12-16 04:17:25] 2025-12-16 09:16:14,974 | INFO     | intersect: -27493208316.83667
[2025-12-16 04:17:25] 2025-12-16 09:16:14,975 | INFO     | chi2: 4.247978248190775
[2025-12-16 04:17:25] 2025-12-16 09:16:14,975 | INFO     | sum of square deviations: 7798959975.808929
[2025-12-16 04:17:25] 2025-12-16 09:16:14,977 | INFO     | sum of deviations: 144378347854.56665
[2025-12-16 04:17:25] 2025-12-16 09:16:14,978 | INFO     | mean x: 1765867302.8668942
[2025-12-16 04:17:25] 2025-12-16 09:16:14,978 | INFO     | mean y: 2494654.5017064847
[2025-12-16 04:17:25] 2025-12-16 09:16:14,978 | INFO     | intersect: -32688146727.05987
[2025-12-16 04:17:25] 2025-12-16 09:16:14,978 | INFO     | chi2: 3.555752293380562
[2025-12-16 04:17:25] 2025-12-16 09:16:14,979 | INFO     | current chi2=3.555752293380562 (change=16.29542135967937 %)
[2025-12-16 04:17:25] 2025-12-16 09:16:14,979 | INFO     | right removable region: 292
[2025-12-16 04:17:25] 2025-12-16 09:16:14,979 | INFO     | sum of square deviations: 7798840292.327593
[2025-12-16 04:17:25] 2025-12-16 09:16:14,981 | INFO     | sum of deviations: 53203730153.590485
[2025-12-16 04:17:25] 2025-12-16 09:16:14,982 | INFO     | mean x: 1765867607.8737202
[2025-12-16 04:17:25] 2025-12-16 09:16:14,982 | INFO     | mean y: 2516437.907849829
[2025-12-16 04:17:25] 2025-12-16 09:16:14,982 | INFO     | intersect: -12044241820.330542
[2025-12-16 04:17:25] 2025-12-16 09:16:14,982 | INFO     | chi2: 1.841083485653893
[2025-12-16 04:17:25] 2025-12-16 09:16:14,982 | INFO     | current chi2=1.841083485653893 (change=56.6597713526896 %)
[2025-12-16 04:17:25] 2025-12-16 09:16:14,983 | INFO     | sum of square deviations: 7406251670.218769
[2025-12-16 04:17:25] 2025-12-16 09:16:14,985 | INFO     | sum of deviations: 16726414612.802101
[2025-12-16 04:17:25] 2025-12-16 09:16:14,985 | INFO     | mean x: 1765867760.3854167
[2025-12-16 04:17:25] 2025-12-16 09:16:14,985 | INFO     | mean y: 2530581.5243055555
[2025-12-16 04:17:25] 2025-12-16 09:16:14,986 | INFO     | intersect: -3985537556.9587994
[2025-12-16 04:17:25] 2025-12-16 09:16:14,986 | INFO     | chi2: 1.2919946271219387
[2025-12-16 04:17:25] 2025-12-16 09:16:14,986 | INFO     | current chi2=1.2919946271219387 (change=29.824223768806213 %)
[2025-12-16 04:17:25] 2025-12-16 09:16:14,987 | INFO     | sum of square deviations: 7027058770.02828
[2025-12-16 04:17:25] 2025-12-16 09:16:14,989 | INFO     | sum of deviations: -9913594062.22261
[2025-12-16 04:17:25] 2025-12-16 09:16:14,989 | INFO     | mean x: 1765867912.8975265
[2025-12-16 04:17:25] 2025-12-16 09:16:14,989 | INFO     | mean y: 2541285.6819787985
[2025-12-16 04:17:25] 2025-12-16 09:16:14,989 | INFO     | intersect: 2493782390.7994046
[2025-12-16 04:17:25] 2025-12-16 09:16:14,990 | INFO     | chi2: 0.998503681543344
[2025-12-16 04:17:25] 2025-12-16 09:16:14,990 | INFO     | current chi2=0.998503681543344 (change=22.716111926283958 %)
[2025-12-16 04:17:25] 2025-12-16 09:16:14,990 | INFO     | left removable region: 30
[2025-12-16 04:17:25] 2025-12-16 09:16:14,990 | INFO     | sum of square deviations: 5575661328.522933
[2025-12-16 04:17:25] 2025-12-16 09:16:14,992 | INFO     | sum of deviations: -17111053770.744291
[2025-12-16 04:17:25] 2025-12-16 09:16:14,992 | INFO     | mean x: 1765868187.4389312
[2025-12-16 04:17:25] 2025-12-16 09:16:14,992 | INFO     | mean y: 2559658.4847328244
[2025-12-16 04:17:25] 2025-12-16 09:16:14,993 | INFO     | intersect: 5421802996.085171
[2025-12-16 04:17:25] 2025-12-16 09:16:14,993 | INFO     | chi2: 0.05906907158487859
[2025-12-16 04:17:25] 2025-12-16 09:16:14,993 | INFO     | current memory leak: -3.07 B/s (using 262 data points, chi2=0.06)
[2025-12-16 04:17:25] 2025-12-16 09:16:14,994 | INFO     | could have reported an average CPU frequency of 2595 MHz (13 samples)
[2025-12-16 04:17:25] 2025-12-16 09:16:14,994 | INFO     | ..............................
[2025-12-16 04:17:25] 2025-12-16 09:16:14,994 | INFO     | . Timing measurements:
[2025-12-16 04:17:25] 2025-12-16 09:16:14,994 | INFO     | . get job = 0 s
[2025-12-16 04:17:25] 2025-12-16 09:16:14,994 | INFO     | . initial setup = 4 s
[2025-12-16 04:17:25] 2025-12-16 09:16:14,994 | INFO     | . payload setup = 19 s
[2025-12-16 04:17:25] 2025-12-16 09:16:14,994 | INFO     | . stage-in = 0 s
[2025-12-16 04:17:25] 2025-12-16 09:16:14,995 | INFO     | . payload execution = 18155 s
[2025-12-16 04:17:25] 2025-12-16 09:16:14,995 | INFO     | . stage-out = 3 s
[2025-12-16 04:17:25] 2025-12-16 09:16:14,995 | INFO     | . log creation = 0 s
[2025-12-16 04:17:25] 2025-12-16 09:16:14,995 | INFO     | ..............................
[2025-12-16 04:17:25] 2025-12-16 09:16:15,582 | INFO     | 
[2025-12-16 04:17:25] 2025-12-16 09:16:15,582 | INFO     | job summary report
[2025-12-16 04:17:25] 2025-12-16 09:16:15,582 | INFO     | --------------------------------------------------
[2025-12-16 04:17:25] 2025-12-16 09:16:15,582 | INFO     | PanDA job id: 6929961266
[2025-12-16 04:17:25] 2025-12-16 09:16:15,582 | INFO     | task id: 47886831
[2025-12-16 04:17:25] 2025-12-16 09:16:15,582 | INFO     | errors: (none)
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | pilot state: finished 
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | transexitcode: 0
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | exeerrorcode: 0
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | exeerrordiag: 
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | exitcode: 0
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | exitmsg: OK
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | cpuconsumptiontime: 51520 s
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | nevents: 400
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | neventsw: 0
[2025-12-16 04:17:25] 2025-12-16 09:16:15,583 | INFO     | pid: 2475843
[2025-12-16 04:17:25] 2025-12-16 09:16:15,584 | INFO     | pgrp: 2475843
[2025-12-16 04:17:25] 2025-12-16 09:16:15,584 | INFO     | corecount: 9
[2025-12-16 04:17:25] 2025-12-16 09:16:15,584 | INFO     | event service: False
[2025-12-16 04:17:25] 2025-12-16 09:16:15,584 | INFO     | sizes: {0: 2283819, 1: 2284018, 2: 2284046, 13: 2284046, 23: 2284102, 25: 2284392, 34: 2284548, 18179: 2316874, 18185: 2325872, 18189: 2325956, 18220: 2326150}
[2025-12-16 04:17:25] 2025-12-16 09:16:15,584 | INFO     | --------------------------------------------------
[2025-12-16 04:17:25] 2025-12-16 09:16:15,584 | INFO     | 
[2025-12-16 04:17:25] 2025-12-16 09:16:15,584 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 04:17:25] 2025-12-16 09:16:15,689 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,689 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,689 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,689 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,690 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,691 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 04:17:25] 2025-12-16 09:16:15,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,691 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 04:17:25] 2025-12-16 09:16:15,691 | INFO     | job 6929961266 has completed (purged errors)
[2025-12-16 04:17:25] 2025-12-16 09:16:15,691 | INFO     | overall cleanup function is called
[2025-12-16 04:17:25] 2025-12-16 09:16:15,739 | INFO     | PID=2468690 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 04:17:25] 2025-12-16 09:16:15,739 | INFO     | .. there are 15 such processes running
[2025-12-16 04:17:25] 2025-12-16 09:16:16,732 | INFO     | --- collectZombieJob: --- 10, [2475843]
[2025-12-16 04:17:25] 2025-12-16 09:16:16,732 | INFO     | zombie collector waiting for pid 2475843
[2025-12-16 04:17:25] 2025-12-16 09:16:16,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 04:17:25] 2025-12-16 09:16:16,732 | INFO     | collected zombie processes
[2025-12-16 04:17:25] 2025-12-16 09:16:16,732 | INFO     | will attempt to kill all subprocesses of pid=2475843
[2025-12-16 04:17:25] 2025-12-16 09:16:17,339 | INFO     | process IDs to be killed: [2475843] (in reverse order)
[2025-12-16 04:17:25] 2025-12-16 09:16:17,561 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 04:17:25] 2025-12-16 09:16:17,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 04:17:25] 2025-12-16 09:16:17,582 | INFO     | did not find any defunct processes belonging to 2475843
[2025-12-16 04:17:25] 2025-12-16 09:16:17,598 | INFO     | did not find any defunct processes belonging to 2475843
[2025-12-16 04:17:25] 2025-12-16 09:16:17,598 | INFO     | ready for new job
[2025-12-16 04:17:25] 2025-12-16 09:16:17,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 04:17:25] 2025-12-16 09:16:17,601 | INFO     | ***************************************
[2025-12-16 04:17:25] 2025-12-16 09:16:17,605 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 04:17:25] 2025-12-16 09:16:17,605 | INFO     | ***************************************
[2025-12-16 04:17:25] 2025-12-16 09:16:17,605 | INFO     | 
[2025-12-16 04:17:25] 2025-12-16 09:16:17,607 | INFO     | architecture information:
[2025-12-16 04:17:25] 2025-12-16 09:16:17,608 | INFO     | executing command: cat /etc/os-release
[2025-12-16 04:17:25] 2025-12-16 09:16:17,678 | INFO     | cat /etc/os-release:
[2025-12-16 04:17:25] NAME="CentOS Linux"
[2025-12-16 04:17:25] VERSION="7 (Core)"
[2025-12-16 04:17:25] ID="centos"
[2025-12-16 04:17:25] ID_LIKE="rhel fedora"
[2025-12-16 04:17:25] VERSION_ID="7"
[2025-12-16 04:17:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 04:17:25] ANSI_COLOR="0;31"
[2025-12-16 04:17:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 04:17:25] HOME_URL="https://www.centos.org/"
[2025-12-16 04:17:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 04:17:25] 
[2025-12-16 04:17:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 04:17:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 04:17:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 04:17:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 04:17:25] 
[2025-12-16 04:17:25] 2025-12-16 09:16:17,678 | INFO     | ***************************************
[2025-12-16 04:17:25] 2025-12-16 09:16:18,182 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 04:17:25] 2025-12-16 09:16:18,320 | INFO     | sufficient remaining disk space (52597620736 B)
[2025-12-16 04:17:25] 2025-12-16 09:16:18,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 04:17:25] 2025-12-16 09:16:18,321 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 04:17:25] 2025-12-16 09:16:18,321 | INFO     | update_server=False
[2025-12-16 04:17:25] 2025-12-16 09:16:18,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 04:17:25] 2025-12-16 09:16:18,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 04:17:25] 2025-12-16 09:16:18,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 04:17:25] 2025-12-16 09:16:18,399 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 04:17:25] 2025-12-16 09:16:18,399 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 04:17:25] 2025-12-16 09:16:18,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 04:17:25] 2025-12-16 09:16:18,399 | INFO     | will abort loop
[2025-12-16 04:17:25] 2025-12-16 09:16:18,559 | INFO     | all data control threads have been joined
[2025-12-16 04:17:25] 2025-12-16 09:16:19,327 | INFO     | [job] retrieve thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:19,360 | INFO     | [data] copytool_in thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:19,377 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:19,377 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:19,378 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:19,405 | INFO     | [job] job monitor thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:19,565 | INFO     | [data] control thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:19,646 | INFO     | all job control threads have been joined
[2025-12-16 04:17:25] 2025-12-16 09:16:19,719 | INFO     | all payload control threads have been joined
[2025-12-16 04:17:25] 2025-12-16 09:16:20,052 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:20,063 | INFO     | [job] validate thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:20,332 | INFO     | [data] copytool_out thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:20,585 | INFO     | [payload] failed_post thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:20,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 04:17:25] 2025-12-16 09:16:20,661 | INFO     | [job] control thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:20,725 | INFO     | [payload] control thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:20,919 | INFO     | [payload] validate_post thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:21,599 | INFO     | [job] queue monitor thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:22,360 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 04:17:25] 2025-12-16 09:16:48,238 | INFO     | PID=2468690 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 04:17:25] 2025-12-16 09:16:48,238 | INFO     | .. there are 15 such processes running
[2025-12-16 04:17:25] 2025-12-16 09:16:48,239 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 04:17:25] 2025-12-16 09:16:48,239 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 04:17:25] 2025-12-16 09:16:48,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 04:17:25] 2025-12-16 09:17:17,166 | INFO     | [monitor] cgroup control has ended
[2025-12-16 04:17:25] 2025-12-16 09:17:18,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140119796066112)>', '<ExcThread(monitor, started 140119013062400)>']
[2025-12-16 04:17:25] 2025-12-16 09:17:19,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 04:17:25] 2025-12-16 09:17:19,583 | INFO     | [monitor] control thread has ended
[2025-12-16 04:17:25] 2025-12-16 09:17:23,804 | INFO     | all workflow threads have been joined
[2025-12-16 04:17:25] 2025-12-16 09:17:23,804 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 04:17:25] 2025-12-16 09:17:23,804 | INFO     | traces error code: 0
[2025-12-16 04:17:25] 2025-12-16 09:17:23,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 04:17:25] 2025-12-16 09:17:24,448 [wrapper] ==== pilot stdout END ====
[2025-12-16 04:17:25] 2025-12-16 09:17:24,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 04:17:25] 2025-12-16 09:17:24,489 [wrapper] pilotpid: 2468690
[2025-12-16 04:17:25] 2025-12-16 09:17:24,492 [wrapper] Pilot exit status: 0
[2025-12-16 04:17:25] 2025-12-16 09:17:24,556 [wrapper] pandaids: 6929961266
[2025-12-16 04:17:25] 2025-12-16 09:17:24,809 [wrapper] cleanup supervisor_pilot 2905714 2468691
[2025-12-16 04:17:25] 2025-12-16 09:17:24,821 [wrapper] Test setup, not cleaning
[2025-12-16 04:17:25] 2025-12-16 09:17:24,824 [wrapper] apfmon messages muted
[2025-12-16 04:17:25] 2025-12-16 09:17:24,827 [wrapper] ==== wrapper stdout END ====
[2025-12-16 04:17:25] 2025-12-16 09:17:24,830 [wrapper] ==== wrapper stderr END ====
[2025-12-16 04:17:25]  *** Error codes and diagnostics ***
[2025-12-16 04:17:25]     "exeErrorCode": 0,
[2025-12-16 04:17:25]     "exeErrorDiag": "",
[2025-12-16 04:17:25]     "pilotErrorCode": 0,
[2025-12-16 04:17:25]     "pilotErrorDiag": "",
[2025-12-16 04:17:25]  *** Listing of results directory ***
[2025-12-16 04:17:25] total 346440
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 13:24 pilot3.tar.gz
[2025-12-16 04:17:25] -rwx------. 1 boincer umatlas     36322 Dec 15 13:28 runpilot2-wrapper.sh
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 13:30 queuedata.json
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas       100 Dec 15 23:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 04:17:25] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 23:11 run_atlas
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas       105 Dec 15 23:11 job.xml
[2025-12-16 04:17:25] -rw-r--r--. 2 boincer umatlas 195559687 Dec 15 23:11 EVNT.47886829._000331.pool.root.1
[2025-12-16 04:17:25] -rw-r--r--. 2 boincer umatlas    592418 Dec 15 23:11 input.tar.gz
[2025-12-16 04:17:25] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 23:11 start_atlas.sh
[2025-12-16 04:17:25] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 23:11 shared
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas         0 Dec 15 23:11 boinc_lockfile
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas      2538 Dec 15 23:11 pandaJob.out
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas        57 Dec 15 23:11 setup.sh.local
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas    994531 Dec 15 23:11 agis_schedconf.cvmfs.json
[2025-12-16 04:17:25] drwx------. 5 boincer umatlas      4096 Dec 15 23:11 pilot3
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas      6709 Dec 16 04:11 init_data.xml
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas 149748768 Dec 16 04:14 HITS.47886831._008804.pool.root.1
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas       531 Dec 16 04:15 boinc_task_state.xml
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas      1043 Dec 16 04:15 memory_monitor_summary.json
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas   1516240 Dec 16 04:15 agis_ddmendpoints.agis.ALL.json
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas    520066 Dec 16 04:15 log.47886831._008804.job.log.tgz.1
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas      7820 Dec 16 04:16 heartbeat.json
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas        95 Dec 16 04:16 pilot_heartbeat.json
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 04:17 boinc_mmap_file
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas      5010 Dec 16 04:17 pilotlog.txt
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas        28 Dec 16 04:17 wrapper_checkpoint.txt
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas   2244484 Dec 16 04:17 log.47886831._008804.job.log.1
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas       357 Dec 16 04:17 output.list
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas       620 Dec 16 04:17 runtime_log
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas   2785280 Dec 16 04:17 result.tar.gz
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas       657 Dec 16 04:17 yCJODmsTSp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmK5TKDmi5LROo.diag
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas      9343 Dec 16 04:17 runtime_log.err
[2025-12-16 04:17:25] -rw-r--r--. 1 boincer umatlas     21293 Dec 16 04:17 stderr.txt
[2025-12-16 04:17:25] HITS file was successfully produced:
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas 149748768 Dec 16 04:14 shared/HITS.pool.root.1
[2025-12-16 04:17:25]  *** Contents of shared directory: ***
[2025-12-16 04:17:25] total 340540
[2025-12-16 04:17:25] -rw-r--r--. 2 boincer umatlas 195559687 Dec 15 23:11 ATLAS.root_0
[2025-12-16 04:17:25] -rw-r--r--. 2 boincer umatlas    592418 Dec 15 23:11 input.tar.gz
[2025-12-16 04:17:25] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 23:11 start_atlas.sh
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas 149748768 Dec 16 04:14 HITS.pool.root.1
[2025-12-16 04:17:25] -rw-------. 1 boincer umatlas   2785280 Dec 16 04:17 result.tar.gz
04:17:26 (2464168): run_atlas exited; CPU time 51966.997009
04:17:26 (2464168): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN