Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:36:06 (12770): wrapper (7.7.26015): starting
17:36:06 (12770): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 17:36:06] Arguments: --nthreads 8
[2025-12-15 17:36:06] Threads: 8
[2025-12-15 17:36:06] Checking for CVMFS
[2025-12-15 17:36:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 17:36:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 17:36:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 17:36:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 17:36:07] 2.11.2.0 26213 93574 81940 154049 2 57 14415696 20275200 1 130560 0 24793213 99.840 5805634 32162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 17:36:07] CVMFS is ok
[2025-12-15 17:36:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 17:36:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 17:36:07] Further information can be found at the LHC@home message board.
[2025-12-15 17:36:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 17:36:07] Checking for apptainer binary...
[2025-12-15 17:36:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 17:36:07] Running /usr/bin/apptainer --version
[2025-12-15 17:36:07] apptainer version 1.3.2-1.el7
[2025-12-15 17:36:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 17:36:08] c-115-4.aglt2.org
[2025-12-15 17:36:08] apptainer works
[2025-12-15 17:36:08] Set ATHENA_PROC_NUMBER=8
[2025-12-15 17:36:08] Set ATHENA_CORE_NUMBER=8
[2025-12-15 17:36:08] Starting ATLAS job with PandaID=6929783594
[2025-12-15 17:36:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 20:13:05]  *** The last 200 lines of the pilot log: ***
[2025-12-15 20:13:05] 2025-12-16 01:12:28,276 | INFO     | executing command: lscpu
[2025-12-15 20:13:05] 2025-12-16 01:12:28,287 | INFO     | time since job start (9362s) is within the limit (174528.0s)
[2025-12-15 20:13:05] 2025-12-16 01:12:28,305 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 20:13:05] 2025-12-16 01:12:30,292 | INFO     | time since job start (9364s) is within the limit (174528.0s)
[2025-12-15 20:13:05] 2025-12-16 01:12:30,534 | INFO     | monitor loop #689: job 0:6929783594 is in state 'finished'
[2025-12-15 20:13:05] 2025-12-16 01:12:30,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 20:13:05] 2025-12-16 01:12:32,295 | INFO     | time since job start (9366s) is within the limit (174528.0s)
[2025-12-15 20:13:05] 2025-12-16 01:12:33,038 | INFO     | monitor loop #690: job 0:6929783594 is in state 'finished'
[2025-12-15 20:13:05] 2025-12-16 01:12:33,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 20:13:05] 2025-12-16 01:12:33,944 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 20:13:05] 2025-12-16 01:12:33,948 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-12-15 20:13:05] 2025-12-16 01:12:33,950 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929783594/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 20:13:05] 2025-12-16 01:12:33,951 | INFO     | extracted standard info from prmon json
[2025-12-15 20:13:05] 2025-12-16 01:12:33,951 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 20:13:05] 2025-12-16 01:12:33,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 20:13:05] 2025-12-16 01:12:33,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 20:13:05] 2025-12-16 01:12:33,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 20:13:05] 2025-12-16 01:12:33,955 | INFO     | fitting pss+swap vs Time
[2025-12-15 20:13:05] 2025-12-16 01:12:33,955 | INFO     | sum of square deviations: 1110539892.0
[2025-12-15 20:13:05] 2025-12-16 01:12:33,956 | INFO     | sum of deviations: -2049876452.0000021
[2025-12-15 20:13:05] 2025-12-16 01:12:33,956 | INFO     | mean x: 1765842854.0
[2025-12-15 20:13:05] 2025-12-16 01:12:33,956 | INFO     | mean y: 2542557.3071895423
[2025-12-15 20:13:05] 2025-12-16 01:12:33,956 | INFO     | intersect: 3262001952.167971
[2025-12-15 20:13:05] 2025-12-16 01:12:33,957 | INFO     | chi2: 1.5520389813349138
[2025-12-15 20:13:05] 2025-12-16 01:12:33,957 | INFO     | sum of square deviations: 1005179777.0
[2025-12-15 20:13:05] 2025-12-16 01:12:33,958 | INFO     | sum of deviations: -1738807501.0000014
[2025-12-15 20:13:05] 2025-12-16 01:12:33,958 | INFO     | mean x: 1765842701.5
[2025-12-15 20:13:05] 2025-12-16 01:12:33,958 | INFO     | mean y: 2543007.7162162163
[2025-12-15 20:13:05] 2025-12-16 01:12:33,958 | INFO     | intersect: 3057181198.029019
[2025-12-15 20:13:05] 2025-12-16 01:12:33,958 | INFO     | chi2: 1.5524135292334387
[2025-12-15 20:13:05] 2025-12-16 01:12:33,959 | INFO     | current chi2=1.5524135292334387 (change=-0.02413263474882046 %)
[2025-12-15 20:13:05] 2025-12-16 01:12:33,959 | INFO     | right removable region: 147
[2025-12-15 20:13:05] 2025-12-16 01:12:33,959 | INFO     | sum of square deviations: 1005179777.0
[2025-12-15 20:13:05] 2025-12-16 01:12:33,960 | INFO     | sum of deviations: -24345001546.0
[2025-12-15 20:13:05] 2025-12-16 01:12:33,960 | INFO     | mean x: 1765843006.5
[2025-12-15 20:13:05] 2025-12-16 01:12:33,960 | INFO     | mean y: 2574324.7837837837
[2025-12-15 20:13:05] 2025-12-16 01:12:33,960 | INFO     | intersect: 42770496747.118576
[2025-12-15 20:13:05] 2025-12-16 01:12:33,960 | INFO     | chi2: 0.13782054089626686
[2025-12-15 20:13:05] 2025-12-16 01:12:33,960 | INFO     | current chi2=0.13782054089626686 (change=91.12003354595339 %)
[2025-12-15 20:13:05] 2025-12-16 01:12:33,961 | INFO     | sum of square deviations: 906703512.0
[2025-12-15 20:13:05] 2025-12-16 01:12:33,961 | INFO     | sum of deviations: -22184311518.0
[2025-12-15 20:13:05] 2025-12-16 01:12:33,961 | INFO     | mean x: 1765843159.0
[2025-12-15 20:13:05] 2025-12-16 01:12:33,961 | INFO     | mean y: 2570914.286713287
[2025-12-15 20:13:05] 2025-12-16 01:12:33,962 | INFO     | intersect: 43207449038.9732
[2025-12-15 20:13:05] 2025-12-16 01:12:33,962 | INFO     | chi2: 0.12721606265788768
[2025-12-15 20:13:05] 2025-12-16 01:12:33,962 | INFO     | current chi2=0.12721606265788768 (change=7.694410549702335 %)
[2025-12-15 20:13:05] 2025-12-16 01:12:33,962 | INFO     | left removable region: 20
[2025-12-15 20:13:05] 2025-12-16 01:12:33,962 | INFO     | sum of square deviations: 635130048.0
[2025-12-15 20:13:05] 2025-12-16 01:12:33,963 | INFO     | sum of deviations: -12579121892.999998
[2025-12-15 20:13:05] 2025-12-16 01:12:33,963 | INFO     | mean x: 1765843281.0
[2025-12-15 20:13:05] 2025-12-16 01:12:33,963 | INFO     | mean y: 2556646.3385826773
[2025-12-15 20:13:05] 2025-12-16 01:12:33,963 | INFO     | intersect: 34976115125.552666
[2025-12-15 20:13:05] 2025-12-16 01:12:33,964 | INFO     | chi2: 0.10375891561204173
[2025-12-15 20:13:05] 2025-12-16 01:12:33,964 | INFO     | current memory leak: -19.81 B/s (using 127 data points, chi2=0.10)
[2025-12-15 20:13:05] 2025-12-16 01:12:33,964 | INFO     | could have reported an average CPU frequency of 2163 MHz (9 samples)
[2025-12-15 20:13:05] 2025-12-16 01:12:33,964 | INFO     | ..............................
[2025-12-15 20:13:05] 2025-12-16 01:12:33,964 | INFO     | . Timing measurements:
[2025-12-15 20:13:05] 2025-12-16 01:12:33,964 | INFO     | . get job = 0 s
[2025-12-15 20:13:05] 2025-12-16 01:12:33,965 | INFO     | . initial setup = 2 s
[2025-12-15 20:13:05] 2025-12-16 01:12:33,965 | INFO     | . payload setup = 8 s
[2025-12-15 20:13:05] 2025-12-16 01:12:33,965 | INFO     | . stage-in = 0 s
[2025-12-15 20:13:05] 2025-12-16 01:12:33,965 | INFO     | . payload execution = 9329 s
[2025-12-15 20:13:05] 2025-12-16 01:12:33,965 | INFO     | . stage-out = 0 s
[2025-12-15 20:13:05] 2025-12-16 01:12:33,965 | INFO     | . log creation = 0 s
[2025-12-15 20:13:05] 2025-12-16 01:12:33,965 | INFO     | ..............................
[2025-12-15 20:13:05] 2025-12-16 01:12:34,049 | INFO     | 
[2025-12-15 20:13:05] 2025-12-16 01:12:34,050 | INFO     | job summary report
[2025-12-15 20:13:05] 2025-12-16 01:12:34,050 | INFO     | --------------------------------------------------
[2025-12-15 20:13:05] 2025-12-16 01:12:34,050 | INFO     | PanDA job id: 6929783594
[2025-12-15 20:13:05] 2025-12-16 01:12:34,050 | INFO     | task id: 47898763
[2025-12-15 20:13:05] 2025-12-16 01:12:34,051 | INFO     | errors: (none)
[2025-12-15 20:13:05] 2025-12-16 01:12:34,051 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 20:13:05] 2025-12-16 01:12:34,051 | INFO     | pilot state: finished 
[2025-12-15 20:13:05] 2025-12-16 01:12:34,051 | INFO     | transexitcode: 0
[2025-12-15 20:13:05] 2025-12-16 01:12:34,051 | INFO     | exeerrorcode: 0
[2025-12-15 20:13:05] 2025-12-16 01:12:34,052 | INFO     | exeerrordiag: 
[2025-12-15 20:13:05] 2025-12-16 01:12:34,052 | INFO     | exitcode: 0
[2025-12-15 20:13:05] 2025-12-16 01:12:34,052 | INFO     | exitmsg: OK
[2025-12-15 20:13:05] 2025-12-16 01:12:34,052 | INFO     | cpuconsumptiontime: 70814 s
[2025-12-15 20:13:05] 2025-12-16 01:12:34,052 | INFO     | nevents: 400
[2025-12-15 20:13:05] 2025-12-16 01:12:34,052 | INFO     | neventsw: 0
[2025-12-15 20:13:05] 2025-12-16 01:12:34,052 | INFO     | pid: 22903
[2025-12-15 20:13:05] 2025-12-16 01:12:34,052 | INFO     | pgrp: 22903
[2025-12-15 20:13:05] 2025-12-16 01:12:34,053 | INFO     | corecount: 8
[2025-12-15 20:13:05] 2025-12-16 01:12:34,053 | INFO     | event service: False
[2025-12-15 20:13:05] 2025-12-16 01:12:34,053 | INFO     | sizes: {0: 2283956, 6: 2284218, 11: 2284246, 9342: 2312580, 9344: 2321662, 9350: 2321864}
[2025-12-15 20:13:05] 2025-12-16 01:12:34,053 | INFO     | --------------------------------------------------
[2025-12-15 20:13:05] 2025-12-16 01:12:34,053 | INFO     | 
[2025-12-15 20:13:05] 2025-12-16 01:12:34,053 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 20:13:05] 2025-12-16 01:12:34,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,083 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,084 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,084 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,086 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 20:13:05] 2025-12-16 01:12:34,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 20:13:05] 2025-12-16 01:12:34,087 | INFO     | job 6929783594 has completed (purged errors)
[2025-12-15 20:13:05] 2025-12-16 01:12:34,087 | INFO     | overall cleanup function is called
[2025-12-15 20:13:05] 2025-12-16 01:12:35,095 | INFO     | --- collectZombieJob: --- 10, [22903]
[2025-12-15 20:13:05] 2025-12-16 01:12:35,096 | INFO     | zombie collector waiting for pid 22903
[2025-12-15 20:13:05] 2025-12-16 01:12:35,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 20:13:05] 2025-12-16 01:12:35,096 | INFO     | collected zombie processes
[2025-12-15 20:13:05] 2025-12-16 01:12:35,096 | INFO     | will attempt to kill all subprocesses of pid=22903
[2025-12-15 20:13:05] 2025-12-16 01:12:35,186 | INFO     | process IDs to be killed: [22903] (in reverse order)
[2025-12-15 20:13:05] 2025-12-16 01:12:35,244 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 20:13:05] 2025-12-16 01:12:35,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 20:13:05] 2025-12-16 01:12:35,251 | INFO     | did not find any defunct processes belonging to 22903
[2025-12-15 20:13:05] 2025-12-16 01:12:35,255 | INFO     | did not find any defunct processes belonging to 22903
[2025-12-15 20:13:05] 2025-12-16 01:12:35,255 | INFO     | ready for new job
[2025-12-15 20:13:05] 2025-12-16 01:12:35,255 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 20:13:05] 2025-12-16 01:12:35,272 | INFO     | ***************************************
[2025-12-15 20:13:05] 2025-12-16 01:12:35,272 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 20:13:05] 2025-12-16 01:12:35,272 | INFO     | ***************************************
[2025-12-15 20:13:05] 2025-12-16 01:12:35,272 | INFO     | 
[2025-12-15 20:13:05] 2025-12-16 01:12:35,273 | INFO     | architecture information:
[2025-12-15 20:13:05] 2025-12-16 01:12:35,273 | INFO     | executing command: cat /etc/os-release
[2025-12-15 20:13:05] 2025-12-16 01:12:35,292 | INFO     | cat /etc/os-release:
[2025-12-15 20:13:05] NAME="CentOS Linux"
[2025-12-15 20:13:05] VERSION="7 (Core)"
[2025-12-15 20:13:05] ID="centos"
[2025-12-15 20:13:05] ID_LIKE="rhel fedora"
[2025-12-15 20:13:05] VERSION_ID="7"
[2025-12-15 20:13:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 20:13:05] ANSI_COLOR="0;31"
[2025-12-15 20:13:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 20:13:05] HOME_URL="https://www.centos.org/"
[2025-12-15 20:13:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 20:13:05] 
[2025-12-15 20:13:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 20:13:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 20:13:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 20:13:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 20:13:05] 
[2025-12-15 20:13:05] 2025-12-16 01:12:35,293 | INFO     | ***************************************
[2025-12-15 20:13:05] 2025-12-16 01:12:35,796 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 20:13:05] 2025-12-16 01:12:35,815 | INFO     | sufficient remaining disk space (18545115136 B)
[2025-12-15 20:13:05] 2025-12-16 01:12:35,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 20:13:05] 2025-12-16 01:12:35,816 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 20:13:05] 2025-12-16 01:12:35,816 | INFO     | update_server=False
[2025-12-15 20:13:05] 2025-12-16 01:12:35,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 20:13:05] 2025-12-16 01:12:35,817 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 20:13:05] 2025-12-16 01:12:35,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 20:13:05] 2025-12-16 01:12:36,547 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 20:13:05] 2025-12-16 01:12:36,548 | INFO     | aborting loop
[2025-12-15 20:13:05] 2025-12-16 01:12:36,578 | INFO     | all data control threads have been joined
[2025-12-15 20:13:05] 2025-12-16 01:12:36,686 | INFO     | all payload control threads have been joined
[2025-12-15 20:13:05] 2025-12-16 01:12:36,822 | INFO     | [job] retrieve thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:36,823 | INFO     | [job] queue monitor thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:37,066 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:37,190 | INFO     | [data] copytool_in thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:37,214 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:37,313 | INFO     | all job control threads have been joined
[2025-12-15 20:13:05] 2025-12-16 01:12:37,390 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:37,551 | INFO     | [job] job monitor thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:37,583 | INFO     | [data] control thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:37,692 | INFO     | [payload] control thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:37,823 | INFO     | [data] copytool_out thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:37,856 | INFO     | [payload] validate_post thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:38,168 | INFO     | [job] validate thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:38,256 | INFO     | [payload] failed_post thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:38,319 | INFO     | [job] control thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:38,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 20:13:05] 2025-12-16 01:12:41,369 | INFO     | [monitor] cgroup control has ended
[2025-12-15 20:13:05] 2025-12-16 01:12:42,789 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:46,086 | INFO     | job.realtimelogging is not enabled
[2025-12-15 20:13:05] 2025-12-16 01:12:47,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 20:13:05] 2025-12-16 01:12:48,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157910685504)>', '<ExcThread(monitor, started 140156652742400)>']
[2025-12-15 20:13:05] 2025-12-16 01:12:53,527 | INFO     | all workflow threads have been joined
[2025-12-15 20:13:05] 2025-12-16 01:12:53,528 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 20:13:05] 2025-12-16 01:12:53,532 | INFO     | traces error code: 0
[2025-12-15 20:13:05] 2025-12-16 01:12:53,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 20:13:05] 2025-12-16 01:13:05,488 | INFO     | PID=16448 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 20:13:05] 2025-12-16 01:13:05,489 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 20:13:05] 2025-12-16 01:13:05,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 20:13:05] 2025-12-16 01:13:05,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 20:13:05] 2025-12-16 01:13:05,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 20:13:05] 2025-12-16 01:13:05,489 | INFO     | [monitor] control thread has ended
[2025-12-15 20:13:05] 2025-12-16 01:13:05,601 [wrapper] ==== pilot stdout END ====
[2025-12-15 20:13:05] 2025-12-16 01:13:05,605 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 20:13:05] 2025-12-16 01:13:05,609 [wrapper] pilotpid: 16448
[2025-12-15 20:13:05] 2025-12-16 01:13:05,614 [wrapper] Pilot exit status: 0
[2025-12-15 20:13:05] 2025-12-16 01:13:05,632 [wrapper] pandaids: 6929783594
[2025-12-15 20:13:05] 2025-12-16 01:13:05,679 [wrapper] cleanup supervisor_pilot 25071 16449
[2025-12-15 20:13:05] 2025-12-16 01:13:05,684 [wrapper] Test setup, not cleaning
[2025-12-15 20:13:05] 2025-12-16 01:13:05,689 [wrapper] apfmon messages muted
[2025-12-15 20:13:05] 2025-12-16 01:13:05,694 [wrapper] ==== wrapper stdout END ====
[2025-12-15 20:13:05] 2025-12-16 01:13:05,699 [wrapper] ==== wrapper stderr END ====
[2025-12-15 20:13:05]  *** Error codes and diagnostics ***
[2025-12-15 20:13:05]     "exeErrorCode": 0,
[2025-12-15 20:13:05]     "exeErrorDiag": "",
[2025-12-15 20:13:05]     "pilotErrorCode": 0,
[2025-12-15 20:13:05]     "pilotErrorDiag": "",
[2025-12-15 20:13:05]  *** Listing of results directory ***
[2025-12-15 20:13:05] total 441780
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 08:27 queuedata.json
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 08:27 pilot3.tar.gz
[2025-12-15 20:13:05] -rwx------ 1 boincer umatlas     36322 Dec 15 08:27 runpilot2-wrapper.sh
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas       100 Dec 15 17:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 20:13:05] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 17:36 run_atlas
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas       105 Dec 15 17:36 job.xml
[2025-12-15 20:13:05] -rw-r--r-- 2 boincer umatlas 225317881 Dec 15 17:36 EVNT.47898761._000662.pool.root.1
[2025-12-15 20:13:05] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 17:36 start_atlas.sh
[2025-12-15 20:13:05] drwxrwx--x 2 boincer umatlas      4096 Dec 15 17:36 shared
[2025-12-15 20:13:05] -rw-r--r-- 2 boincer umatlas    592389 Dec 15 17:36 input.tar.gz
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas         0 Dec 15 17:36 boinc_lockfile
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas      2507 Dec 15 17:36 pandaJob.out
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas        57 Dec 15 17:36 setup.sh.local
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas    994547 Dec 15 17:36 agis_schedconf.cvmfs.json
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas   1516240 Dec 15 17:36 agis_ddmendpoints.agis.ALL.json
[2025-12-15 20:13:05] drwx------ 5 boincer umatlas      4096 Dec 15 17:36 pilot3
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas      5909 Dec 15 20:10 init_data.xml
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas       529 Dec 15 20:11 boinc_task_state.xml
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas 219768434 Dec 15 20:11 HITS.47898763._016557.pool.root.1
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas      1047 Dec 15 20:12 memory_monitor_summary.json
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas    380319 Dec 15 20:12 log.47898763._016557.job.log.tgz.1
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas        95 Dec 15 20:12 pilot_heartbeat.json
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas      7841 Dec 15 20:12 heartbeat.json
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas        27 Dec 15 20:13 wrapper_checkpoint.txt
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 20:13 boinc_mmap_file
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas       745 Dec 15 20:13 pilotlog.txt
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas   1308555 Dec 15 20:13 log.47898763._016557.job.log.1
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas       357 Dec 15 20:13 output.list
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas       620 Dec 15 20:13 runtime_log
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas   1710080 Dec 15 20:13 result.tar.gz
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas       659 Dec 15 20:13 vRuMDmgmNp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqUTKDmRhHgnn.diag
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas      9337 Dec 15 20:13 runtime_log.err
[2025-12-15 20:13:05] -rw-r--r-- 1 boincer umatlas     21315 Dec 15 20:13 stderr.txt
[2025-12-15 20:13:05] HITS file was successfully produced:
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas 219768434 Dec 15 20:11 shared/HITS.pool.root.1
[2025-12-15 20:13:05]  *** Contents of shared directory: ***
[2025-12-15 20:13:05] total 436932
[2025-12-15 20:13:05] -rw-r--r-- 2 boincer umatlas 225317881 Dec 15 17:36 ATLAS.root_0
[2025-12-15 20:13:05] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 17:36 start_atlas.sh
[2025-12-15 20:13:05] -rw-r--r-- 2 boincer umatlas    592389 Dec 15 17:36 input.tar.gz
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas 219768434 Dec 15 20:11 HITS.pool.root.1
[2025-12-15 20:13:05] -rw------- 1 boincer umatlas   1710080 Dec 15 20:13 result.tar.gz
20:13:07 (12770): run_atlas exited; CPU time 70766.098305
20:13:07 (12770): called boinc_finish(0)

</stderr_txt>
]]>

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