Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:59:33 (16765): wrapper (7.7.26015): starting
04:59:33 (16765): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 04:59:33] Arguments: --nthreads 8
[2025-12-16 04:59:33] Threads: 8
[2025-12-16 04:59:33] Checking for CVMFS
[2025-12-16 04:59:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 04:59:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 04:59:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 04:59:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 04:59:36] 2.11.2.0 28330 345 55468 154056 3 269 14681658 25165825 4699 130560 0 531564 99.993 105285 2421 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-16 04:59:36] CVMFS is ok
[2025-12-16 04:59:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 04:59:36] Checking for apptainer binary...
[2025-12-16 04:59:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 04:59:36] Running /usr/bin/apptainer --version
[2025-12-16 04:59:36] apptainer version 1.3.2-1.el7
[2025-12-16 04:59:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 04:59:50] cg-vwn377.simple-grid.lan
[2025-12-16 04:59:50] apptainer works
[2025-12-16 04:59:50] Set ATHENA_PROC_NUMBER=8
[2025-12-16 04:59:50] Set ATHENA_CORE_NUMBER=8
[2025-12-16 04:59:51] Starting ATLAS job with PandaID=6929722122
[2025-12-16 04:59:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 10:56:56]  *** The last 200 lines of the pilot log: ***
[2025-12-16 10:56:56] 2025-12-16 09:56:19,644 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 10:56:56] 2025-12-16 09:56:19,646 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-16 10:56:56] 2025-12-16 09:56:19,648 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6929722122/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 10:56:56] 2025-12-16 09:56:19,648 | INFO     | extracted standard info from prmon json
[2025-12-16 10:56:56] 2025-12-16 09:56:19,649 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 10:56:56] 2025-12-16 09:56:19,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 10:56:56] 2025-12-16 09:56:19,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 10:56:56] 2025-12-16 09:56:19,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 10:56:56] 2025-12-16 09:56:19,658 | INFO     | fitting pss+swap vs Time
[2025-12-16 10:56:56] 2025-12-16 09:56:19,659 | INFO     | sum of square deviations: 12080189290.0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,663 | INFO     | sum of deviations: 67003305728.000046
[2025-12-16 10:56:56] 2025-12-16 09:56:19,663 | INFO     | mean x: 1765868549.0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,663 | INFO     | mean y: 2476383.994100295
[2025-12-16 10:56:56] 2025-12-16 09:56:19,663 | INFO     | intersect: -9791991850.212421
[2025-12-16 10:56:56] 2025-12-16 09:56:19,664 | INFO     | chi2: 6.530288309564427
[2025-12-16 10:56:56] 2025-12-16 09:56:19,665 | INFO     | sum of square deviations: 11553509647.5
[2025-12-16 10:56:56] 2025-12-16 09:56:19,669 | INFO     | sum of deviations: 87720055364.50002
[2025-12-16 10:56:56] 2025-12-16 09:56:19,670 | INFO     | mean x: 1765868396.5
[2025-12-16 10:56:56] 2025-12-16 09:56:19,670 | INFO     | mean y: 2482303.9251497006
[2025-12-16 10:56:56] 2025-12-16 09:56:19,670 | INFO     | intersect: -13404878596.225157
[2025-12-16 10:56:56] 2025-12-16 09:56:19,671 | INFO     | chi2: 5.797153609370947
[2025-12-16 10:56:56] 2025-12-16 09:56:19,675 | INFO     | current chi2=5.797153609370947 (change=11.226681969304664 %)
[2025-12-16 10:56:56] 2025-12-16 09:56:19,675 | INFO     | right removable region: 333
[2025-12-16 10:56:56] 2025-12-16 09:56:19,676 | INFO     | sum of square deviations: 11553509647.5
[2025-12-16 10:56:56] 2025-12-16 09:56:19,680 | INFO     | sum of deviations: -51995594586.50001
[2025-12-16 10:56:56] 2025-12-16 09:56:19,680 | INFO     | mean x: 1765868701.5
[2025-12-16 10:56:56] 2025-12-16 09:56:19,680 | INFO     | mean y: 2510826.1766467066
[2025-12-16 10:56:56] 2025-12-16 09:56:19,680 | INFO     | intersect: 7949653806.755803
[2025-12-16 10:56:56] 2025-12-16 09:56:19,681 | INFO     | chi2: 1.8788494225477383
[2025-12-16 10:56:56] 2025-12-16 09:56:19,681 | INFO     | current chi2=1.8788494225477383 (change=71.22869108556925 %)
[2025-12-16 10:56:56] 2025-12-16 09:56:19,682 | INFO     | sum of square deviations: 11042365180.0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,685 | INFO     | sum of deviations: -93898010955.00012
[2025-12-16 10:56:56] 2025-12-16 09:56:19,686 | INFO     | mean x: 1765868854.0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,686 | INFO     | mean y: 2523254.73556231
[2025-12-16 10:56:56] 2025-12-16 09:56:19,687 | INFO     | intersect: 15018470499.290058
[2025-12-16 10:56:56] 2025-12-16 09:56:19,688 | INFO     | chi2: 1.0182051235514542
[2025-12-16 10:56:56] 2025-12-16 09:56:19,688 | INFO     | current chi2=1.0182051235514542 (change=45.80698637516369 %)
[2025-12-16 10:56:56] 2025-12-16 09:56:19,688 | INFO     | sum of square deviations: 10546523325.0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,692 | INFO     | sum of deviations: -93560433111.99988
[2025-12-16 10:56:56] 2025-12-16 09:56:19,693 | INFO     | mean x: 1765869006.5
[2025-12-16 10:56:56] 2025-12-16 09:56:19,693 | INFO     | mean y: 2523135.0679012346
[2025-12-16 10:56:56] 2025-12-16 09:56:19,693 | INFO     | intersect: 15667919586.196209
[2025-12-16 10:56:56] 2025-12-16 09:56:19,693 | INFO     | chi2: 1.0014905540578447
[2025-12-16 10:56:56] 2025-12-16 09:56:19,694 | INFO     | current chi2=1.0014905540578447 (change=1.6415719295646267 %)
[2025-12-16 10:56:56] 2025-12-16 09:56:19,694 | INFO     | left removable region: 30
[2025-12-16 10:56:56] 2025-12-16 09:56:19,694 | INFO     | sum of square deviations: 8625843592.0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,697 | INFO     | sum of deviations: -48866286259.999985
[2025-12-16 10:56:56] 2025-12-16 09:56:19,698 | INFO     | mean x: 1765869281.0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,698 | INFO     | mean y: 2522381.1452145213
[2025-12-16 10:56:56] 2025-12-16 09:56:19,698 | INFO     | intersect: 10006352483.411037
[2025-12-16 10:56:56] 2025-12-16 09:56:19,698 | INFO     | chi2: 0.19124410180056042
[2025-12-16 10:56:56] 2025-12-16 09:56:19,699 | INFO     | current memory leak: -5.67 B/s (using 303 data points, chi2=0.19)
[2025-12-16 10:56:56] 2025-12-16 09:56:19,699 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-16 10:56:56] 2025-12-16 09:56:19,700 | INFO     | ..............................
[2025-12-16 10:56:56] 2025-12-16 09:56:19,700 | INFO     | . Timing measurements:
[2025-12-16 10:56:56] 2025-12-16 09:56:19,700 | INFO     | . get job = 0 s
[2025-12-16 10:56:56] 2025-12-16 09:56:19,700 | INFO     | . initial setup = 7 s
[2025-12-16 10:56:56] 2025-12-16 09:56:19,700 | INFO     | . payload setup = 131 s
[2025-12-16 10:56:56] 2025-12-16 09:56:19,700 | INFO     | . stage-in = 0 s
[2025-12-16 10:56:56] 2025-12-16 09:56:19,700 | INFO     | . payload execution = 20784 s
[2025-12-16 10:56:56] 2025-12-16 09:56:19,700 | INFO     | . stage-out = 2 s
[2025-12-16 10:56:56] 2025-12-16 09:56:19,700 | INFO     | . log creation = 0 s
[2025-12-16 10:56:56] 2025-12-16 09:56:19,700 | INFO     | ..............................
[2025-12-16 10:56:56] 2025-12-16 09:56:19,849 | INFO     | 
[2025-12-16 10:56:56] 2025-12-16 09:56:19,849 | INFO     | job summary report
[2025-12-16 10:56:56] 2025-12-16 09:56:19,849 | INFO     | --------------------------------------------------
[2025-12-16 10:56:56] 2025-12-16 09:56:19,849 | INFO     | PanDA job id: 6929722122
[2025-12-16 10:56:56] 2025-12-16 09:56:19,850 | INFO     | task id: 47898763
[2025-12-16 10:56:56] 2025-12-16 09:56:19,850 | INFO     | errors: (none)
[2025-12-16 10:56:56] 2025-12-16 09:56:19,850 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 10:56:56] 2025-12-16 09:56:19,850 | INFO     | pilot state: finished 
[2025-12-16 10:56:56] 2025-12-16 09:56:19,850 | INFO     | transexitcode: 0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,850 | INFO     | exeerrorcode: 0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,850 | INFO     | exeerrordiag: 
[2025-12-16 10:56:56] 2025-12-16 09:56:19,850 | INFO     | exitcode: 0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,850 | INFO     | exitmsg: OK
[2025-12-16 10:56:56] 2025-12-16 09:56:19,851 | INFO     | cpuconsumptiontime: 78977 s
[2025-12-16 10:56:56] 2025-12-16 09:56:19,851 | INFO     | nevents: 400
[2025-12-16 10:56:56] 2025-12-16 09:56:19,851 | INFO     | neventsw: 0
[2025-12-16 10:56:56] 2025-12-16 09:56:19,851 | INFO     | pid: 27041
[2025-12-16 10:56:56] 2025-12-16 09:56:19,851 | INFO     | pgrp: 27041
[2025-12-16 10:56:56] 2025-12-16 09:56:19,851 | INFO     | corecount: 8
[2025-12-16 10:56:56] 2025-12-16 09:56:19,851 | INFO     | event service: False
[2025-12-16 10:56:56] 2025-12-16 09:56:19,851 | INFO     | sizes: {0: 2283787, 1: 2283986, 12: 2283986, 23: 2284014, 34: 2284042, 44: 2284070, 55: 2284226, 66: 2284254, 77: 2284282, 87: 2284338, 92: 2284628, 98: 2284936, 2
[2025-12-16 10:56:56] 2025-12-16 09:56:19,851 | INFO     | --------------------------------------------------
[2025-12-16 10:56:56] 2025-12-16 09:56:19,852 | INFO     | 
[2025-12-16 10:56:56] 2025-12-16 09:56:19,852 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-12-16 10:56:56] 2025-12-16 09:56:20,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,111 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,111 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,113 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 10:56:56] 2025-12-16 09:56:20,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,113 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 10:56:56] 2025-12-16 09:56:20,113 | INFO     | job 6929722122 has completed (purged errors)
[2025-12-16 10:56:56] 2025-12-16 09:56:20,113 | INFO     | overall cleanup function is called
[2025-12-16 10:56:56] 2025-12-16 09:56:21,122 | INFO     | --- collectZombieJob: --- 10, [27041]
[2025-12-16 10:56:56] 2025-12-16 09:56:21,122 | INFO     | zombie collector waiting for pid 27041
[2025-12-16 10:56:56] 2025-12-16 09:56:21,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 10:56:56] 2025-12-16 09:56:21,122 | INFO     | collected zombie processes
[2025-12-16 10:56:56] 2025-12-16 09:56:21,123 | INFO     | will attempt to kill all subprocesses of pid=27041
[2025-12-16 10:56:56] 2025-12-16 09:56:21,237 | INFO     | process IDs to be killed: [27041] (in reverse order)
[2025-12-16 10:56:56] 2025-12-16 09:56:21,924 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 10:56:56] 2025-12-16 09:56:21,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 10:56:56] 2025-12-16 09:56:21,932 | INFO     | did not find any defunct processes belonging to 27041
[2025-12-16 10:56:56] 2025-12-16 09:56:21,935 | INFO     | did not find any defunct processes belonging to 27041
[2025-12-16 10:56:56] 2025-12-16 09:56:21,936 | INFO     | ready for new job
[2025-12-16 10:56:56] 2025-12-16 09:56:21,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 10:56:56] 2025-12-16 09:56:21,938 | INFO     | ***************************************
[2025-12-16 10:56:56] 2025-12-16 09:56:21,938 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 10:56:56] 2025-12-16 09:56:21,938 | INFO     | ***************************************
[2025-12-16 10:56:56] 2025-12-16 09:56:21,939 | INFO     | 
[2025-12-16 10:56:56] 2025-12-16 09:56:21,939 | INFO     | pilot is running in a VM
[2025-12-16 10:56:56] 2025-12-16 09:56:21,939 | INFO     | architecture information:
[2025-12-16 10:56:56] 2025-12-16 09:56:21,954 | INFO     | executing command: cat /etc/os-release
[2025-12-16 10:56:56] 2025-12-16 09:56:22,187 | INFO     | cat /etc/os-release:
[2025-12-16 10:56:56] NAME="CentOS Linux"
[2025-12-16 10:56:56] VERSION="7 (Core)"
[2025-12-16 10:56:56] ID="centos"
[2025-12-16 10:56:56] ID_LIKE="rhel fedora"
[2025-12-16 10:56:56] VERSION_ID="7"
[2025-12-16 10:56:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 10:56:56] ANSI_COLOR="0;31"
[2025-12-16 10:56:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 10:56:56] HOME_URL="https://www.centos.org/"
[2025-12-16 10:56:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 10:56:56] 
[2025-12-16 10:56:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 10:56:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 10:56:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 10:56:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 10:56:56] 
[2025-12-16 10:56:56] 2025-12-16 09:56:22,187 | INFO     | ***************************************
[2025-12-16 10:56:56] 2025-12-16 09:56:22,690 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-12-16 10:56:56] 2025-12-16 09:56:22,818 | INFO     | sufficient remaining disk space (495927164928 B)
[2025-12-16 10:56:56] 2025-12-16 09:56:22,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 10:56:56] 2025-12-16 09:56:22,819 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 10:56:56] 2025-12-16 09:56:22,819 | INFO     | update_server=False
[2025-12-16 10:56:56] 2025-12-16 09:56:22,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 10:56:56] 2025-12-16 09:56:22,919 | INFO     | all job control threads have been joined
[2025-12-16 10:56:56] 2025-12-16 09:56:23,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 10:56:56] 2025-12-16 09:56:23,220 | INFO     | aborting loop
[2025-12-16 10:56:56] 2025-12-16 09:56:23,465 | INFO     | all data control threads have been joined
[2025-12-16 10:56:56] 2025-12-16 09:56:23,825 | INFO     | [job] retrieve thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:23,833 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:23,854 | INFO     | [job] validate thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:23,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 10:56:56] 2025-12-16 09:56:23,925 | INFO     | [job] control thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:23,967 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:24,079 | INFO     | [payload] validate_post thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:24,150 | INFO     | all payload control threads have been joined
[2025-12-16 10:56:56] 2025-12-16 09:56:24,226 | INFO     | [job] job monitor thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:24,471 | INFO     | [data] copytool_in thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:24,472 | INFO     | [data] control thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:24,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 10:56:56] 2025-12-16 09:56:24,914 | INFO     | [payload] failed_post thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:25,018 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:25,156 | INFO     | [payload] control thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:25,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 10:56:56] 2025-12-16 09:56:25,871 | INFO     | [job] queue monitor thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:25,897 | INFO     | [data] copytool_out thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:29,791 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:30,790 | INFO     | [monitor] cgroup control has ended
[2025-12-16 10:56:56] 2025-12-16 09:56:33,314 | INFO     | job.realtimelogging is not enabled
[2025-12-16 10:56:56] 2025-12-16 09:56:34,320 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 10:56:56] 2025-12-16 09:56:35,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988480530240)>', '<ExcThread(monitor, started 139988041705216)>']
[2025-12-16 10:56:56] 2025-12-16 09:56:40,332 | INFO     | all workflow threads have been joined
[2025-12-16 10:56:56] 2025-12-16 09:56:40,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 10:56:56] 2025-12-16 09:56:40,332 | INFO     | traces error code: 0
[2025-12-16 10:56:56] 2025-12-16 09:56:40,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 10:56:56] 2025-12-16 09:56:51,681 | INFO     | PID=20538 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 10:56:56] 2025-12-16 09:56:51,682 | INFO     | .. there are 9 such processes running
[2025-12-16 10:56:56] 2025-12-16 09:56:51,682 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 10:56:56] 2025-12-16 09:56:51,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 10:56:56] 2025-12-16 09:56:51,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 10:56:56] 2025-12-16 09:56:51,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 10:56:56] 2025-12-16 09:56:51,682 | INFO     | [monitor] control thread has ended
[2025-12-16 10:56:56] 2025-12-16 09:56:52,017 [wrapper] ==== pilot stdout END ====
[2025-12-16 10:56:56] 2025-12-16 09:56:52,062 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 10:56:56] 2025-12-16 09:56:52,111 [wrapper] pilotpid: 20538
[2025-12-16 10:56:56] 2025-12-16 09:56:52,236 [wrapper] Pilot exit status: 0
[2025-12-16 10:56:56] 2025-12-16 09:56:52,622 [wrapper] pandaids: 6929722122
[2025-12-16 10:56:56] 2025-12-16 09:56:53,540 [wrapper] cleanup supervisor_pilot 12978 20539
[2025-12-16 10:56:56] 2025-12-16 09:56:53,601 [wrapper] Test setup, not cleaning
[2025-12-16 10:56:56] 2025-12-16 09:56:53,709 [wrapper] apfmon messages muted
[2025-12-16 10:56:56] 2025-12-16 09:56:53,804 [wrapper] ==== wrapper stdout END ====
[2025-12-16 10:56:56] 2025-12-16 09:56:53,904 [wrapper] ==== wrapper stderr END ====
[2025-12-16 10:56:56]  *** Error codes and diagnostics ***
[2025-12-16 10:56:56]     "exeErrorCode": 0,
[2025-12-16 10:56:56]     "exeErrorDiag": "",
[2025-12-16 10:56:56]     "pilotErrorCode": 0,
[2025-12-16 10:56:56]     "pilotErrorDiag": "",
[2025-12-16 10:56:56]  *** Listing of results directory ***
[2025-12-16 10:56:56] total 437372
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc    579449 Dec 15 11:33 pilot3.tar.gz
[2025-12-16 10:56:56] -rwx------. 1 boinc boinc     36322 Dec 15 11:37 runpilot2-wrapper.sh
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc      5112 Dec 15 11:40 queuedata.json
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc       100 Dec 16 04:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 10:56:56] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 04:59 run_atlas
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc       105 Dec 16 04:59 job.xml
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc      6392 Dec 16 04:59 init_data.xml
[2025-12-16 10:56:56] -rw-r--r--. 2 boinc boinc 225388849 Dec 16 04:59 EVNT.47898761._000648.pool.root.1
[2025-12-16 10:56:56] -rw-r--r--. 2 boinc boinc     15847 Dec 16 04:59 start_atlas.sh
[2025-12-16 10:56:56] drwxrwx--x. 2 boinc boinc        68 Dec 16 04:59 shared
[2025-12-16 10:56:56] -rw-r--r--. 2 boinc boinc    592399 Dec 16 04:59 input.tar.gz
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc         0 Dec 16 04:59 boinc_lockfile
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc      2508 Dec 16 04:59 pandaJob.out
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc    994531 Dec 16 05:02 agis_schedconf.cvmfs.json
[2025-12-16 10:56:56] drwx------. 5 boinc boinc      4096 Dec 16 05:02 pilot3
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc 211883195 Dec 16 10:53 HITS.47898763._016208.pool.root.1
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc       531 Dec 16 10:54 boinc_task_state.xml
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc      1013 Dec 16 10:54 memory_monitor_summary.json
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc   1516240 Dec 16 10:54 agis_ddmendpoints.agis.ALL.json
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc    534553 Dec 16 10:54 log.47898763._016208.job.log.tgz.1
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc        95 Dec 16 10:56 pilot_heartbeat.json
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc      7778 Dec 16 10:56 heartbeat.json
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc       820 Dec 16 10:56 pilotlog.txt
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc   2813788 Dec 16 10:56 log.47898763._016208.job.log.1
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc       357 Dec 16 10:56 output.list
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc       620 Dec 16 10:56 runtime_log
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc   3368960 Dec 16 10:56 result.tar.gz
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc      8817 Dec 16 10:56 runtime_log.err
[2025-12-16 10:56:56] -rw-------. 1 boinc boinc       658 Dec 16 10:56 fz7LDml8Kp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4vXKDmvM104n.diag
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc        28 Dec 16 10:56 wrapper_checkpoint.txt
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc      8192 Dec 16 10:56 boinc_mmap_file
[2025-12-16 10:56:56] -rw-r--r--. 1 boinc boinc     20758 Dec 16 10:56 stderr.txt
[2025-12-16 10:56:56] HITS file was successfully produced:
[2025-12-16 10:56:57] -rw-------. 1 boinc boinc 211883195 Dec 16 10:53 shared/HITS.pool.root.1
[2025-12-16 10:56:57]  *** Contents of shared directory: ***
[2025-12-16 10:56:57] total 430916
[2025-12-16 10:56:57] -rw-r--r--. 2 boinc boinc 225388849 Dec 16 04:59 ATLAS.root_0
[2025-12-16 10:56:57] -rw-r--r--. 2 boinc boinc     15847 Dec 16 04:59 start_atlas.sh
[2025-12-16 10:56:57] -rw-r--r--. 2 boinc boinc    592399 Dec 16 04:59 input.tar.gz
[2025-12-16 10:56:57] -rw-------. 1 boinc boinc 211883195 Dec 16 10:53 HITS.pool.root.1
[2025-12-16 10:56:57] -rw-------. 1 boinc boinc   3368960 Dec 16 10:56 result.tar.gz
10:56:58 (16765): run_atlas exited; CPU time 79306.656999
10:56:58 (16765): called boinc_finish(0)

</stderr_txt>
]]>

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