Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:16:50 (1623097): wrapper (7.7.26015): starting
06:16:50 (1623097): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 06:16:50] Arguments: --nthreads 4
[2025-12-16 06:16:50] Threads: 4
[2025-12-16 06:16:50] Checking for CVMFS
[2025-12-16 06:16:50] No cvmfs_config command found, will try listing directly
[2025-12-16 06:16:50] CVMFS is ok
[2025-12-16 06:16:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 06:16:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 06:16:50] Further information can be found at the LHC@home message board.
[2025-12-16 06:16:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 06:16:50] Checking for apptainer binary...
[2025-12-16 06:16:50] which: no apptainer in ((null))
[2025-12-16 06:16:50] apptainer is not installed, using version from CVMFS
[2025-12-16 06:16:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 06:16:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-12-16 06:16:50] apptainer works
[2025-12-16 06:16:50] Set ATHENA_PROC_NUMBER=4
[2025-12-16 06:16:50] Set ATHENA_CORE_NUMBER=4
[2025-12-16 06:16:50] Starting ATLAS job with PandaID=6929524843
[2025-12-16 06:16:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 10:05:28]  *** The last 200 lines of the pilot log: ***
[2025-12-16 10:05:28] 2025-12-16 08:55:20,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 10:05:28] 2025-12-16 08:55:21,157 | INFO     | time since job start (13097s) is within the limit (174528.0s)
[2025-12-16 10:05:28] 2025-12-16 08:55:22,563 | INFO     | monitor loop #897: job 0:6929524843 is in state 'finished'
[2025-12-16 10:05:28] 2025-12-16 08:55:22,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 10:05:28] 2025-12-16 08:55:23,164 | INFO     | time since job start (13099s) is within the limit (174528.0s)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,067 | INFO     | monitor loop #898: job 0:6929524843 is in state 'finished'
[2025-12-16 10:05:28] 2025-12-16 08:55:25,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,079 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 10:05:28] 2025-12-16 08:55:25,100 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2706.3854687499997
[2025-12-16 10:05:28] 2025-12-16 08:55:25,125 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6929524843/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,126 | INFO     | extracted standard info from prmon json
[2025-12-16 10:05:28] 2025-12-16 08:55:25,126 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 10:05:28] 2025-12-16 08:55:25,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 10:05:28] 2025-12-16 08:55:25,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 10:05:28] 2025-12-16 08:55:25,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 10:05:28] 2025-12-16 08:55:25,131 | INFO     | fitting pss+swap vs Time
[2025-12-16 10:05:28] 2025-12-16 08:55:25,131 | INFO     | sum of square deviations: 3038856977.5
[2025-12-16 10:05:28] 2025-12-16 08:55:25,133 | INFO     | sum of deviations: -17571318156.0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,133 | INFO     | mean x: 1765868754.5
[2025-12-16 10:05:28] 2025-12-16 08:55:25,133 | INFO     | mean y: 2375292.803738318
[2025-12-16 10:05:28] 2025-12-16 08:55:25,133 | INFO     | intersect: 10213004465.811256
[2025-12-16 10:05:28] 2025-12-16 08:55:25,133 | INFO     | chi2: 1.395280717730472
[2025-12-16 10:05:28] 2025-12-16 08:55:25,134 | INFO     | sum of square deviations: 2830787960.0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,135 | INFO     | sum of deviations: -16788265791.999998
[2025-12-16 10:05:28] 2025-12-16 08:55:25,135 | INFO     | mean x: 1765868602.0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,135 | INFO     | mean y: 2375866.7942583733
[2025-12-16 10:05:28] 2025-12-16 08:55:25,135 | INFO     | intersect: 10475032901.877684
[2025-12-16 10:05:28] 2025-12-16 08:55:25,136 | INFO     | chi2: 1.3944283388604477
[2025-12-16 10:05:28] 2025-12-16 08:55:25,136 | INFO     | current chi2=1.3944283388604477 (change=0.061090134708574995 %)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,136 | INFO     | right removable region: 208
[2025-12-16 10:05:28] 2025-12-16 08:55:25,136 | INFO     | sum of square deviations: 2830787960.0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,138 | INFO     | sum of deviations: -42672598129.0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,138 | INFO     | mean x: 1765868907.0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,138 | INFO     | mean y: 2393438.162679426
[2025-12-16 10:05:28] 2025-12-16 08:55:25,138 | INFO     | intersect: 26621912554.99101
[2025-12-16 10:05:28] 2025-12-16 08:55:25,138 | INFO     | chi2: 0.11514236619187847
[2025-12-16 10:05:28] 2025-12-16 08:55:25,138 | INFO     | current chi2=0.11514236619187847 (change=91.74772755555843 %)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,139 | INFO     | sum of square deviations: 2632440055.0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,140 | INFO     | sum of deviations: -39734875186.499985
[2025-12-16 10:05:28] 2025-12-16 08:55:25,140 | INFO     | mean x: 1765869059.5
[2025-12-16 10:05:28] 2025-12-16 08:55:25,140 | INFO     | mean y: 2391176.612745098
[2025-12-16 10:05:28] 2025-12-16 08:55:25,140 | INFO     | intersect: 26656972177.103794
[2025-12-16 10:05:28] 2025-12-16 08:55:25,141 | INFO     | chi2: 0.11507292329644037
[2025-12-16 10:05:28] 2025-12-16 08:55:25,141 | INFO     | current chi2=0.11507292329644037 (change=0.06031046411047239 %)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,141 | INFO     | left removable region: 20
[2025-12-16 10:05:28] 2025-12-16 08:55:25,141 | INFO     | sum of square deviations: 2060343747.0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,142 | INFO     | sum of deviations: -30469235382.000015
[2025-12-16 10:05:28] 2025-12-16 08:55:25,142 | INFO     | mean x: 1765869181.5
[2025-12-16 10:05:28] 2025-12-16 08:55:25,143 | INFO     | mean y: 2385508.3085106383
[2025-12-16 10:05:28] 2025-12-16 08:55:25,143 | INFO     | intersect: 26116806377.78064
[2025-12-16 10:05:28] 2025-12-16 08:55:25,143 | INFO     | chi2: 0.1087397161264247
[2025-12-16 10:05:28] 2025-12-16 08:55:25,143 | INFO     | current memory leak: -14.79 B/s (using 188 data points, chi2=0.11)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,143 | INFO     | could have reported an average CPU frequency of 2709 MHz (11 samples)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,144 | INFO     | ..............................
[2025-12-16 10:05:28] 2025-12-16 08:55:25,144 | INFO     | . Timing measurements:
[2025-12-16 10:05:28] 2025-12-16 08:55:25,144 | INFO     | . get job = 0 s
[2025-12-16 10:05:28] 2025-12-16 08:55:25,144 | INFO     | . initial setup = 1 s
[2025-12-16 10:05:28] 2025-12-16 08:55:25,144 | INFO     | . payload setup = 8 s
[2025-12-16 10:05:28] 2025-12-16 08:55:25,144 | INFO     | . stage-in = 0 s
[2025-12-16 10:05:28] 2025-12-16 08:55:25,144 | INFO     | . payload execution = 13060 s
[2025-12-16 10:05:28] 2025-12-16 08:55:25,144 | INFO     | . stage-out = 1 s
[2025-12-16 10:05:28] 2025-12-16 08:55:25,144 | INFO     | . log creation = 0 s
[2025-12-16 10:05:28] 2025-12-16 08:55:25,144 | INFO     | ..............................
[2025-12-16 10:05:28] 2025-12-16 08:55:25,172 | INFO     | time since job start (13101s) is within the limit (174528.0s)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,247 | INFO     | 
[2025-12-16 10:05:28] 2025-12-16 08:55:25,247 | INFO     | job summary report
[2025-12-16 10:05:28] 2025-12-16 08:55:25,247 | INFO     | --------------------------------------------------
[2025-12-16 10:05:28] 2025-12-16 08:55:25,247 | INFO     | PanDA job id: 6929524843
[2025-12-16 10:05:28] 2025-12-16 08:55:25,247 | INFO     | task id: 47898763
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | errors: (none)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | pilot state: finished 
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | transexitcode: 0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | exeerrorcode: 0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | exeerrordiag: 
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | exitcode: 0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | exitmsg: OK
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | cpuconsumptiontime: 50505 s
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | nevents: 400
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | neventsw: 0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,248 | INFO     | pid: 1646964
[2025-12-16 10:05:28] 2025-12-16 08:55:25,249 | INFO     | pgrp: 1646964
[2025-12-16 10:05:28] 2025-12-16 08:55:25,249 | INFO     | corecount: 4
[2025-12-16 10:05:28] 2025-12-16 08:55:25,249 | INFO     | event service: False
[2025-12-16 10:05:28] 2025-12-16 08:55:25,249 | INFO     | sizes: {0: 2283970, 1: 2283970, 7: 2284260, 11: 2284288, 13072: 2315206, 13074: 2324228, 13076: 2324412, 13082: 2324606}
[2025-12-16 10:05:28] 2025-12-16 08:55:25,249 | INFO     | --------------------------------------------------
[2025-12-16 10:05:28] 2025-12-16 08:55:25,249 | INFO     | 
[2025-12-16 10:05:28] 2025-12-16 08:55:25,249 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-12-16 10:05:28] 2025-12-16 08:55:25,280 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,281 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 10:05:28] 2025-12-16 08:55:25,282 | INFO     | job 6929524843 has completed (purged errors)
[2025-12-16 10:05:28] 2025-12-16 08:55:25,282 | INFO     | overall cleanup function is called
[2025-12-16 10:05:28] 2025-12-16 08:55:26,291 | INFO     | --- collectZombieJob: --- 10, [1646964]
[2025-12-16 10:05:28] 2025-12-16 08:55:26,291 | INFO     | zombie collector waiting for pid 1646964
[2025-12-16 10:05:28] 2025-12-16 08:55:26,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 10:05:28] 2025-12-16 08:55:26,291 | INFO     | collected zombie processes
[2025-12-16 10:05:28] 2025-12-16 08:55:26,292 | INFO     | will attempt to kill all subprocesses of pid=1646964
[2025-12-16 10:05:28] 2025-12-16 08:55:28,377 | INFO     | PID=1630107 has CPU usage=22.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-16 10:05:28] 2025-12-16 08:55:28,378 | INFO     | .. there are 8 such processes running
[2025-12-16 10:05:28] 2025-12-16 08:55:28,406 | INFO     | process IDs to be killed: [1646964] (in reverse order)
[2025-12-16 10:05:28] 2025-12-16 08:55:28,646 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 10:05:28] 2025-12-16 08:55:28,646 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 10:05:28] 2025-12-16 08:55:28,678 | INFO     | did not find any defunct processes belonging to 1646964
[2025-12-16 10:05:28] 2025-12-16 08:55:28,707 | INFO     | did not find any defunct processes belonging to 1646964
[2025-12-16 10:05:28] 2025-12-16 08:55:28,708 | INFO     | ready for new job
[2025-12-16 10:05:28] 2025-12-16 08:55:28,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 10:05:28] 2025-12-16 08:55:28,710 | INFO     | ***************************************
[2025-12-16 10:05:28] 2025-12-16 08:55:28,713 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 10:05:28] 2025-12-16 08:55:28,713 | INFO     | ***************************************
[2025-12-16 10:05:28] 2025-12-16 08:55:28,713 | INFO     | 
[2025-12-16 10:05:28] 2025-12-16 08:55:28,722 | INFO     | architecture information:
[2025-12-16 10:05:28] 2025-12-16 08:55:28,722 | INFO     | executing command: cat /etc/os-release
[2025-12-16 10:05:28] 2025-12-16 08:55:28,751 | INFO     | cat /etc/os-release:
[2025-12-16 10:05:28] NAME="CentOS Linux"
[2025-12-16 10:05:28] VERSION="7 (Core)"
[2025-12-16 10:05:28] ID="centos"
[2025-12-16 10:05:28] ID_LIKE="rhel fedora"
[2025-12-16 10:05:28] VERSION_ID="7"
[2025-12-16 10:05:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 10:05:28] ANSI_COLOR="0;31"
[2025-12-16 10:05:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 10:05:28] HOME_URL="https://www.centos.org/"
[2025-12-16 10:05:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 10:05:28] 
[2025-12-16 10:05:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 10:05:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 10:05:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 10:05:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 10:05:28] 
[2025-12-16 10:05:28] 2025-12-16 08:55:28,751 | INFO     | ***************************************
[2025-12-16 10:05:28] 2025-12-16 08:55:29,254 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-12-16 10:05:28] 2025-12-16 08:55:29,283 | INFO     | sufficient remaining disk space (3273364865024 B)
[2025-12-16 10:05:28] 2025-12-16 08:55:29,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 10:05:28] 2025-12-16 08:55:29,283 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 10:05:28] 2025-12-16 08:55:29,283 | INFO     | update_server=False
[2025-12-16 10:05:28] 2025-12-16 08:55:29,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 10:05:28] 2025-12-16 08:55:29,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 10:05:28] 2025-12-16 08:55:29,284 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-16 10:05:28] 2025-12-16 08:55:29,285 | INFO     | aborting loop
[2025-12-16 10:05:28] 2025-12-16 08:55:29,285 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 10:05:28] 2025-12-16 08:55:29,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 10:05:28] 2025-12-16 08:55:29,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 10:05:28] 2025-12-16 08:55:29,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 10:05:28] 2025-12-16 08:55:29,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 10:05:28] 2025-12-16 08:55:29,777 | INFO     | all job control threads have been joined
[2025-12-16 10:05:28] 2025-12-16 08:55:29,824 | INFO     | all data control threads have been joined
[2025-12-16 10:05:28] 2025-12-16 08:55:30,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 10:05:28] 2025-12-16 08:55:30,288 | INFO     | [job] retrieve thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:30,290 | INFO     | [job] job monitor thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:30,477 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:30,484 | INFO     | [payload] validate_post thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:30,489 | INFO     | all payload control threads have been joined
[2025-12-16 10:05:28] 2025-12-16 08:55:30,783 | INFO     | [job] control thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:30,826 | INFO     | [data] control thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:30,983 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:31,029 | INFO     | [payload] failed_post thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:31,195 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:31,283 | INFO     | [job] queue monitor thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:31,469 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:31,494 | INFO     | [payload] control thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:31,635 | INFO     | [data] copytool_out thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:31,705 | INFO     | [data] copytool_in thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:31,784 | INFO     | [job] validate thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:55:33,290 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 10:05:28] 2025-12-16 08:56:25,528 | INFO     | [monitor] cgroup control has ended
[2025-12-16 10:05:28] 2025-12-16 08:56:26,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22783280817984)>', '<ExcThread(monitor, started 22783033554688)>']
[2025-12-16 10:05:28] 2025-12-16 08:56:27,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 10:05:28] 2025-12-16 08:56:27,563 | INFO     | [monitor] control thread has ended
[2025-12-16 10:05:28] 2025-12-16 08:56:31,769 | INFO     | all workflow threads have been joined
[2025-12-16 10:05:28] 2025-12-16 08:56:31,769 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 10:05:28] 2025-12-16 08:56:31,769 | INFO     | traces error code: 0
[2025-12-16 10:05:28] 2025-12-16 08:56:31,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 10:05:28] 2025-12-16 08:56:31,901 [wrapper] ==== pilot stdout END ====
[2025-12-16 10:05:28] 2025-12-16 08:56:31,906 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 10:05:28] 2025-12-16 08:56:31,910 [wrapper] pilotpid: 1630107
[2025-12-16 10:05:28] 2025-12-16 08:56:31,914 [wrapper] Pilot exit status: 0
[2025-12-16 10:05:28] 2025-12-16 08:56:31,929 [wrapper] pandaids: 6929524843
[2025-12-16 10:05:28] 2025-12-16 08:56:32,096 [wrapper] cleanup supervisor_pilot 2013663 1630108
[2025-12-16 10:05:28] 2025-12-16 08:56:32,101 [wrapper] Test setup, not cleaning
[2025-12-16 10:05:28] 2025-12-16 08:56:32,105 [wrapper] apfmon messages muted
[2025-12-16 10:05:28] 2025-12-16 08:56:32,110 [wrapper] ==== wrapper stdout END ====
[2025-12-16 10:05:28] 2025-12-16 08:56:32,113 [wrapper] ==== wrapper stderr END ====
[2025-12-16 10:05:28]  *** Error codes and diagnostics ***
[2025-12-16 10:05:28]     "exeErrorCode": 0,
[2025-12-16 10:05:28]     "exeErrorDiag": "",
[2025-12-16 10:05:28]     "pilotErrorCode": 0,
[2025-12-16 10:05:28]     "pilotErrorDiag": "",
[2025-12-16 10:05:28]  *** Listing of results directory ***
[2025-12-16 10:05:28] total 447000
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc    579449 Dec 15 06:25 pilot3.tar.gz
[2025-12-16 10:05:28] -rwx------ 1 boinc boinc     36322 Dec 15 06:26 runpilot2-wrapper.sh
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc      5112 Dec 15 06:27 queuedata.json
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc       100 Dec 16 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 10:05:28] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 06:16 run_atlas
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc       105 Dec 16 06:16 job.xml
[2025-12-16 10:05:28] -rw-r--r-- 2 boinc boinc 221705698 Dec 16 06:16 EVNT.47898761._000608.pool.root.1
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc      6691 Dec 16 06:16 init_data.xml
[2025-12-16 10:05:28] -rw-r--r-- 2 boinc boinc     15847 Dec 16 06:16 start_atlas.sh
[2025-12-16 10:05:28] drwxrwx--x 2 boinc boinc      4096 Dec 16 06:16 shared
[2025-12-16 10:05:28] -rw-r--r-- 2 boinc boinc    592400 Dec 16 06:16 input.tar.gz
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc         0 Dec 16 06:16 boinc_lockfile
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc      2508 Dec 16 06:16 pandaJob.out
[2025-12-16 10:05:28] -rw------- 1 boinc boinc    994531 Dec 16 06:17 agis_schedconf.cvmfs.json
[2025-12-16 10:05:28] drwx------ 5 boinc boinc      4096 Dec 16 06:17 pilot3
[2025-12-16 10:05:28] -rw------- 1 boinc boinc 227677354 Dec 16 09:54 HITS.47898763._013946.pool.root.1
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc       529 Dec 16 09:54 boinc_task_state.xml
[2025-12-16 10:05:28] -rw------- 1 boinc boinc      1027 Dec 16 09:55 memory_monitor_summary.json
[2025-12-16 10:05:28] -rw------- 1 boinc boinc   1516240 Dec 16 09:55 agis_ddmendpoints.agis.ALL.json
[2025-12-16 10:05:28] -rw------- 1 boinc boinc    388185 Dec 16 09:55 log.47898763._013946.job.log.tgz.1
[2025-12-16 10:05:28] -rw------- 1 boinc boinc      7790 Dec 16 09:55 heartbeat.json
[2025-12-16 10:05:28] -rw------- 1 boinc boinc        95 Dec 16 09:55 pilot_heartbeat.json
[2025-12-16 10:05:28] -rw------- 1 boinc boinc      4564 Dec 16 09:56 pilotlog.txt
[2025-12-16 10:05:28] -rw------- 1 boinc boinc   1823630 Dec 16 09:56 log.47898763._013946.job.log.1
[2025-12-16 10:05:28] -rw------- 1 boinc boinc       357 Dec 16 09:56 output.list
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc       620 Dec 16 09:56 runtime_log
[2025-12-16 10:05:28] -rw------- 1 boinc boinc   2232320 Dec 16 09:56 result.tar.gz
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc      9223 Dec 16 09:56 runtime_log.err
[2025-12-16 10:05:28] -rw------- 1 boinc boinc       666 Dec 16 09:56 Z5QKDmfHGp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWHXKDm23J36m.diag
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc        26 Dec 16 10:05 wrapper_checkpoint.txt
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc      8192 Dec 16 10:05 boinc_mmap_file
[2025-12-16 10:05:28] -rw-r--r-- 1 boinc boinc     21174 Dec 16 10:05 stderr.txt
[2025-12-16 10:05:28] HITS file was successfully produced:
[2025-12-16 10:05:28] -rw------- 1 boinc boinc 227677354 Dec 16 09:54 shared/HITS.pool.root.1
[2025-12-16 10:05:28]  *** Contents of shared directory: ***
[2025-12-16 10:05:28] total 441640
[2025-12-16 10:05:28] -rw-r--r-- 2 boinc boinc 221705698 Dec 16 06:16 ATLAS.root_0
[2025-12-16 10:05:28] -rw-r--r-- 2 boinc boinc     15847 Dec 16 06:16 start_atlas.sh
[2025-12-16 10:05:28] -rw-r--r-- 2 boinc boinc    592400 Dec 16 06:16 input.tar.gz
[2025-12-16 10:05:28] -rw------- 1 boinc boinc 227677354 Dec 16 09:54 HITS.pool.root.1
[2025-12-16 10:05:28] -rw------- 1 boinc boinc   2232320 Dec 16 09:56 result.tar.gz
10:05:29 (1623097): run_atlas exited; CPU time 51368.551793
10:05:29 (1623097): called boinc_finish(0)

</stderr_txt>
]]>

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