Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:17:41 (8834): wrapper (7.7.26015): starting
17:17:41 (8834): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 17:17:41] Arguments: --nthreads 12
[2025-12-15 17:17:41] Threads: 12
[2025-12-15 17:17:41] Checking for CVMFS
[2025-12-15 17:17:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 17:17:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 17:17:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 17:17:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 17:17:42] 2.11.2.0 22587 30173 91416 154049 3 1 14166156 20275201 1 130560 0 11209302 99.907 1906156 41366 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 17:17:42] CVMFS is ok
[2025-12-15 17:17:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 17:17:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 17:17:42] Further information can be found at the LHC@home message board.
[2025-12-15 17:17:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 17:17:42] Checking for apptainer binary...
[2025-12-15 17:17:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 17:17:42] Running /usr/bin/apptainer --version
[2025-12-15 17:17:42] apptainer version 1.3.2-1.el7
[2025-12-15 17:17:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 17:17:43] c-205-13.aglt2.org
[2025-12-15 17:17:43] apptainer works
[2025-12-15 17:17:43] Set ATHENA_PROC_NUMBER=12
[2025-12-15 17:17:43] Set ATHENA_CORE_NUMBER=12
[2025-12-15 17:17:43] Starting ATLAS job with PandaID=6929721926
[2025-12-15 17:17:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 19:01:25]  *** The last 200 lines of the pilot log: ***
[2025-12-15 19:01:25] 2025-12-16 00:00:46,768 | INFO     | total number of processed events: 400 (read)
[2025-12-15 19:01:25] 2025-12-16 00:00:46,769 | INFO     | executing command: lscpu
[2025-12-15 19:01:25] 2025-12-16 00:00:46,795 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 19:01:25] 2025-12-16 00:00:48,310 | INFO     | time since job start (6170s) is within the limit (174528.0s)
[2025-12-15 19:01:25] 2025-12-16 00:00:49,011 | INFO     | monitor loop #457: job 0:6929721926 is in state 'finished'
[2025-12-15 19:01:25] 2025-12-16 00:00:49,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 19:01:25] 2025-12-16 00:00:50,315 | INFO     | time since job start (6172s) is within the limit (174528.0s)
[2025-12-15 19:01:25] 2025-12-16 00:00:51,514 | INFO     | monitor loop #458: job 0:6929721926 is in state 'finished'
[2025-12-15 19:01:25] 2025-12-16 00:00:51,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,320 | INFO     | time since job start (6174s) is within the limit (174528.0s)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,542 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 19:01:25] 2025-12-16 00:00:52,546 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-15 19:01:25] 2025-12-16 00:00:52,549 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929721926/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,549 | INFO     | extracted standard info from prmon json
[2025-12-15 19:01:25] 2025-12-16 00:00:52,550 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 19:01:25] 2025-12-16 00:00:52,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 19:01:25] 2025-12-16 00:00:52,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 19:01:25] 2025-12-16 00:00:52,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 19:01:25] 2025-12-16 00:00:52,552 | INFO     | fitting pss+swap vs Time
[2025-12-15 19:01:25] 2025-12-16 00:00:52,552 | INFO     | sum of square deviations: 319447850.0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,553 | INFO     | sum of deviations: -1483956394.0000038
[2025-12-15 19:01:25] 2025-12-16 00:00:52,553 | INFO     | mean x: 1765840157.0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,553 | INFO     | mean y: 2761012.168316832
[2025-12-15 19:01:25] 2025-12-16 00:00:52,553 | INFO     | intersect: 8205758126.60224
[2025-12-15 19:01:25] 2025-12-16 00:00:52,553 | INFO     | chi2: 1.6142874199193875
[2025-12-15 19:01:25] 2025-12-16 00:00:52,554 | INFO     | sum of square deviations: 274312120.0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,554 | INFO     | sum of deviations: -453398786.99999654
[2025-12-15 19:01:25] 2025-12-16 00:00:52,554 | INFO     | mean x: 1765840004.5
[2025-12-15 19:01:25] 2025-12-16 00:00:52,554 | INFO     | mean y: 2764497.2291666665
[2025-12-15 19:01:25] 2025-12-16 00:00:52,554 | INFO     | intersect: 2921446019.855175
[2025-12-15 19:01:25] 2025-12-16 00:00:52,555 | INFO     | chi2: 1.617615714650488
[2025-12-15 19:01:25] 2025-12-16 00:00:52,555 | INFO     | current chi2=1.617615714650488 (change=-0.20617733186984857 %)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,555 | INFO     | right removable region: 95
[2025-12-15 19:01:25] 2025-12-16 00:00:52,555 | INFO     | sum of square deviations: 274312120.0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,555 | INFO     | sum of deviations: -18913101819.5
[2025-12-15 19:01:25] 2025-12-16 00:00:52,556 | INFO     | mean x: 1765840309.5
[2025-12-15 19:01:25] 2025-12-16 00:00:52,556 | INFO     | mean y: 2818761.65625
[2025-12-15 19:01:25] 2025-12-16 00:00:52,556 | INFO     | intersect: 121752880591.04567
[2025-12-15 19:01:25] 2025-12-16 00:00:52,556 | INFO     | chi2: 0.07744349235593992
[2025-12-15 19:01:25] 2025-12-16 00:00:52,556 | INFO     | current chi2=0.07744349235593992 (change=95.20262058662347 %)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,556 | INFO     | sum of square deviations: 233641590.0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,557 | INFO     | sum of deviations: -17678046622.999985
[2025-12-15 19:01:25] 2025-12-16 00:00:52,557 | INFO     | mean x: 1765840462.0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,557 | INFO     | mean y: 2814085.054945055
[2025-12-15 19:01:25] 2025-12-16 00:00:52,557 | INFO     | intersect: 133611774784.2859
[2025-12-15 19:01:25] 2025-12-16 00:00:52,557 | INFO     | chi2: 0.06909904172592184
[2025-12-15 19:01:25] 2025-12-16 00:00:52,557 | INFO     | current chi2=0.06909904172592184 (change=10.774889375683047 %)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,557 | INFO     | left removable region: 20
[2025-12-15 19:01:25] 2025-12-16 00:00:52,558 | INFO     | sum of square deviations: 130793150.0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,558 | INFO     | sum of deviations: -12049232217.0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,558 | INFO     | mean x: 1765840584.0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,558 | INFO     | mean y: 2803836.053333333
[2025-12-15 19:01:25] 2025-12-16 00:00:52,558 | INFO     | intersect: 162679696737.69913
[2025-12-15 19:01:25] 2025-12-16 00:00:52,559 | INFO     | chi2: 0.05824699774172281
[2025-12-15 19:01:25] 2025-12-16 00:00:52,559 | INFO     | current memory leak: -92.12 B/s (using 75 data points, chi2=0.06)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,559 | INFO     | could have reported an average CPU frequency of 2134 MHz (7 samples)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,559 | INFO     | ..............................
[2025-12-15 19:01:25] 2025-12-16 00:00:52,559 | INFO     | . Timing measurements:
[2025-12-15 19:01:25] 2025-12-16 00:00:52,559 | INFO     | . get job = 0 s
[2025-12-15 19:01:25] 2025-12-16 00:00:52,559 | INFO     | . initial setup = 2 s
[2025-12-15 19:01:25] 2025-12-16 00:00:52,560 | INFO     | . payload setup = 7 s
[2025-12-15 19:01:25] 2025-12-16 00:00:52,560 | INFO     | . stage-in = 0 s
[2025-12-15 19:01:25] 2025-12-16 00:00:52,560 | INFO     | . payload execution = 6138 s
[2025-12-15 19:01:25] 2025-12-16 00:00:52,560 | INFO     | . stage-out = 0 s
[2025-12-15 19:01:25] 2025-12-16 00:00:52,560 | INFO     | . log creation = 0 s
[2025-12-15 19:01:25] 2025-12-16 00:00:52,560 | INFO     | ..............................
[2025-12-15 19:01:25] 2025-12-16 00:00:52,639 | INFO     | 
[2025-12-15 19:01:25] 2025-12-16 00:00:52,639 | INFO     | job summary report
[2025-12-15 19:01:25] 2025-12-16 00:00:52,639 | INFO     | --------------------------------------------------
[2025-12-15 19:01:25] 2025-12-16 00:00:52,639 | INFO     | PanDA job id: 6929721926
[2025-12-15 19:01:25] 2025-12-16 00:00:52,639 | INFO     | task id: 47898763
[2025-12-15 19:01:25] 2025-12-16 00:00:52,640 | INFO     | errors: (none)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,640 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 19:01:25] 2025-12-16 00:00:52,640 | INFO     | pilot state: finished 
[2025-12-15 19:01:25] 2025-12-16 00:00:52,640 | INFO     | transexitcode: 0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,640 | INFO     | exeerrorcode: 0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,640 | INFO     | exeerrordiag: 
[2025-12-15 19:01:25] 2025-12-16 00:00:52,640 | INFO     | exitcode: 0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,641 | INFO     | exitmsg: OK
[2025-12-15 19:01:25] 2025-12-16 00:00:52,641 | INFO     | cpuconsumptiontime: 68721 s
[2025-12-15 19:01:25] 2025-12-16 00:00:52,641 | INFO     | nevents: 400
[2025-12-15 19:01:25] 2025-12-16 00:00:52,641 | INFO     | neventsw: 0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,641 | INFO     | pid: 18956
[2025-12-15 19:01:25] 2025-12-16 00:00:52,641 | INFO     | pgrp: 18956
[2025-12-15 19:01:25] 2025-12-16 00:00:52,641 | INFO     | corecount: 12
[2025-12-15 19:01:25] 2025-12-16 00:00:52,642 | INFO     | event service: False
[2025-12-15 19:01:25] 2025-12-16 00:00:52,642 | INFO     | sizes: {0: 2283787, 1: 2283986, 5: 2284248, 11: 2284304, 6149: 2311083, 6150: 2320081, 6152: 2320265, 6158: 2320459}
[2025-12-15 19:01:25] 2025-12-16 00:00:52,642 | INFO     | --------------------------------------------------
[2025-12-15 19:01:25] 2025-12-16 00:00:52,642 | INFO     | 
[2025-12-15 19:01:25] 2025-12-16 00:00:52,642 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 19:01:25] 2025-12-16 00:00:52,666 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,666 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,667 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,667 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,667 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,667 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,667 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,668 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,668 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,669 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,669 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 19:01:25] 2025-12-16 00:00:52,670 | INFO     | job 6929721926 has completed (purged errors)
[2025-12-15 19:01:25] 2025-12-16 00:00:52,670 | INFO     | overall cleanup function is called
[2025-12-15 19:01:25] 2025-12-16 00:00:53,678 | INFO     | --- collectZombieJob: --- 10, [18956]
[2025-12-15 19:01:25] 2025-12-16 00:00:53,678 | INFO     | zombie collector waiting for pid 18956
[2025-12-15 19:01:25] 2025-12-16 00:00:53,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 19:01:25] 2025-12-16 00:00:53,678 | INFO     | collected zombie processes
[2025-12-15 19:01:25] 2025-12-16 00:00:53,678 | INFO     | will attempt to kill all subprocesses of pid=18956
[2025-12-15 19:01:25] 2025-12-16 00:00:53,767 | INFO     | process IDs to be killed: [18956] (in reverse order)
[2025-12-15 19:01:25] 2025-12-16 00:00:53,819 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 19:01:25] 2025-12-16 00:00:53,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 19:01:25] 2025-12-16 00:00:53,821 | INFO     | did not find any defunct processes belonging to 18956
[2025-12-15 19:01:25] 2025-12-16 00:00:53,824 | INFO     | did not find any defunct processes belonging to 18956
[2025-12-15 19:01:25] 2025-12-16 00:00:53,824 | INFO     | ready for new job
[2025-12-15 19:01:25] 2025-12-16 00:00:53,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 19:01:25] 2025-12-16 00:00:53,825 | INFO     | ***************************************
[2025-12-15 19:01:25] 2025-12-16 00:00:53,825 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 19:01:25] 2025-12-16 00:00:53,825 | INFO     | ***************************************
[2025-12-15 19:01:25] 2025-12-16 00:00:53,825 | INFO     | 
[2025-12-15 19:01:25] 2025-12-16 00:00:53,826 | INFO     | architecture information:
[2025-12-15 19:01:25] 2025-12-16 00:00:53,826 | INFO     | executing command: cat /etc/os-release
[2025-12-15 19:01:25] 2025-12-16 00:00:53,842 | INFO     | cat /etc/os-release:
[2025-12-15 19:01:25] NAME="CentOS Linux"
[2025-12-15 19:01:25] VERSION="7 (Core)"
[2025-12-15 19:01:25] ID="centos"
[2025-12-15 19:01:25] ID_LIKE="rhel fedora"
[2025-12-15 19:01:25] VERSION_ID="7"
[2025-12-15 19:01:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 19:01:25] ANSI_COLOR="0;31"
[2025-12-15 19:01:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 19:01:25] HOME_URL="https://www.centos.org/"
[2025-12-15 19:01:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 19:01:25] 
[2025-12-15 19:01:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 19:01:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 19:01:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 19:01:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 19:01:25] 
[2025-12-15 19:01:25] 2025-12-16 00:00:53,842 | INFO     | ***************************************
[2025-12-15 19:01:25] 2025-12-16 00:00:54,346 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 19:01:25] 2025-12-16 00:00:54,362 | INFO     | sufficient remaining disk space (29312942080 B)
[2025-12-15 19:01:25] 2025-12-16 00:00:54,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 19:01:25] 2025-12-16 00:00:54,363 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 19:01:25] 2025-12-16 00:00:54,363 | INFO     | update_server=False
[2025-12-15 19:01:25] 2025-12-16 00:00:54,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 19:01:25] 2025-12-16 00:00:54,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 19:01:25] 2025-12-16 00:00:54,647 | INFO     | all job control threads have been joined
[2025-12-15 19:01:25] 2025-12-16 00:00:54,908 | INFO     | all payload control threads have been joined
[2025-12-15 19:01:25] 2025-12-16 00:00:55,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 19:01:25] 2025-12-16 00:00:55,025 | INFO     | aborting loop
[2025-12-15 19:01:25] 2025-12-16 00:00:55,369 | INFO     | [job] retrieve thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:55,369 | INFO     | [job] queue monitor thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:55,403 | INFO     | all data control threads have been joined
[2025-12-15 19:01:25] 2025-12-16 00:00:55,533 | INFO     | [data] copytool_in thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:55,653 | INFO     | [job] control thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:55,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 19:01:25] 2025-12-16 00:00:55,914 | INFO     | [payload] control thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:55,946 | INFO     | [job] validate thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:56,010 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:56,030 | INFO     | [job] job monitor thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:56,033 | INFO     | [payload] validate_post thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:56,231 | INFO     | [payload] failed_post thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:56,272 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:56,286 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:56,408 | INFO     | [data] control thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:56,757 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:00:57,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 19:01:25] 2025-12-16 00:00:57,739 | INFO     | [data] copytool_out thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:01:01,282 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 19:01:25] 2025-12-16 00:01:08,249 | INFO     | [monitor] cgroup control has ended
[2025-12-15 19:01:25] 2025-12-16 00:01:08,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501566216000)>', '<ExcThread(monitor, started 140500443059968)>']
[2025-12-15 19:01:25] 2025-12-16 00:01:13,592 | INFO     | all workflow threads have been joined
[2025-12-15 19:01:25] 2025-12-16 00:01:13,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 19:01:25] 2025-12-16 00:01:13,592 | INFO     | traces error code: 0
[2025-12-15 19:01:25] 2025-12-16 00:01:13,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 19:01:25] 2025-12-16 00:01:25,527 | INFO     | PID=12525 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 19:01:25] 2025-12-16 00:01:25,527 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 19:01:25] 2025-12-16 00:01:25,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 19:01:25] 2025-12-16 00:01:25,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 19:01:25] 2025-12-16 00:01:25,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 19:01:25] 2025-12-16 00:01:25,528 | INFO     | [monitor] control thread has ended
[2025-12-15 19:01:25] 2025-12-16 00:01:25,618 [wrapper] ==== pilot stdout END ====
[2025-12-15 19:01:25] 2025-12-16 00:01:25,622 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 19:01:25] 2025-12-16 00:01:25,626 [wrapper] pilotpid: 12525
[2025-12-15 19:01:25] 2025-12-16 00:01:25,630 [wrapper] Pilot exit status: 0
[2025-12-15 19:01:25] 2025-12-16 00:01:25,646 [wrapper] pandaids: 6929721926
[2025-12-15 19:01:25] 2025-12-16 00:01:25,686 [wrapper] cleanup supervisor_pilot 18102 12526
[2025-12-15 19:01:25] 2025-12-16 00:01:25,690 [wrapper] Test setup, not cleaning
[2025-12-15 19:01:25] 2025-12-16 00:01:25,694 [wrapper] apfmon messages muted
[2025-12-15 19:01:25] 2025-12-16 00:01:25,698 [wrapper] ==== wrapper stdout END ====
[2025-12-15 19:01:25] 2025-12-16 00:01:25,702 [wrapper] ==== wrapper stderr END ====
[2025-12-15 19:01:25]  *** Error codes and diagnostics ***
[2025-12-15 19:01:25]     "exeErrorCode": 0,
[2025-12-15 19:01:25]     "exeErrorDiag": "",
[2025-12-15 19:01:25]     "pilotErrorCode": 0,
[2025-12-15 19:01:25]     "pilotErrorDiag": "",
[2025-12-15 19:01:25]  *** Listing of results directory ***
[2025-12-15 19:01:25] total 443932
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 05:33 pilot3.tar.gz
[2025-12-15 19:01:25] -rwx------ 1 boincer umatlas     36322 Dec 15 05:34 runpilot2-wrapper.sh
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 05:35 queuedata.json
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas       100 Dec 15 17:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 19:01:25] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 17:17 run_atlas
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas       105 Dec 15 17:17 job.xml
[2025-12-15 19:01:25] -rw-r--r-- 2 boincer umatlas 225086035 Dec 15 17:17 EVNT.47898761._000640.pool.root.1
[2025-12-15 19:01:25] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 17:17 start_atlas.sh
[2025-12-15 19:01:25] drwxrwx--x 2 boincer umatlas      4096 Dec 15 17:17 shared
[2025-12-15 19:01:25] -rw-r--r-- 2 boincer umatlas    592396 Dec 15 17:17 input.tar.gz
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas         0 Dec 15 17:17 boinc_lockfile
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas      2508 Dec 15 17:17 pandaJob.out
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas        57 Dec 15 17:17 setup.sh.local
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas    994547 Dec 15 17:17 agis_schedconf.cvmfs.json
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas   1516240 Dec 15 17:17 agis_ddmendpoints.agis.ALL.json
[2025-12-15 19:01:25] drwx------ 5 boincer umatlas      4096 Dec 15 17:17 pilot3
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas 223021320 Dec 15 19:00 HITS.47898763._016012.pool.root.1
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas       529 Dec 15 19:00 boinc_task_state.xml
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas      5953 Dec 15 19:00 init_data.xml
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas      1046 Dec 15 19:00 memory_monitor_summary.json
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas    399690 Dec 15 19:00 log.47898763._016012.job.log.tgz.1
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas      7850 Dec 15 19:00 heartbeat.json
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 19:00 boinc_mmap_file
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas        27 Dec 15 19:00 wrapper_checkpoint.txt
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas        95 Dec 15 19:01 pilot_heartbeat.json
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas       745 Dec 15 19:01 pilotlog.txt
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas    877394 Dec 15 19:01 log.47898763._016012.job.log.1
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas       357 Dec 15 19:01 output.list
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas       620 Dec 15 19:01 runtime_log
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas   1300480 Dec 15 19:01 result.tar.gz
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas      9344 Dec 15 19:01 runtime_log.err
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas       660 Dec 15 19:01 k4WKDmf5Kp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvpXKDmuCC4Xo.diag
[2025-12-15 19:01:25] -rw-r--r-- 1 boincer umatlas     21356 Dec 15 19:01 stderr.txt
[2025-12-15 19:01:25] HITS file was successfully produced:
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas 223021320 Dec 15 19:00 shared/HITS.pool.root.1
[2025-12-15 19:01:25]  *** Contents of shared directory: ***
[2025-12-15 19:01:25] total 439484
[2025-12-15 19:01:25] -rw-r--r-- 2 boincer umatlas 225086035 Dec 15 17:17 ATLAS.root_0
[2025-12-15 19:01:25] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 17:17 start_atlas.sh
[2025-12-15 19:01:25] -rw-r--r-- 2 boincer umatlas    592396 Dec 15 17:17 input.tar.gz
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas 223021320 Dec 15 19:00 HITS.pool.root.1
[2025-12-15 19:01:25] -rw------- 1 boincer umatlas   1300480 Dec 15 19:01 result.tar.gz
19:01:27 (8834): run_atlas exited; CPU time 68699.974282
19:01:27 (8834): called boinc_finish(0)

</stderr_txt>
]]>

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