Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:19:32 (2410161): wrapper (7.7.26015): starting
02:19:32 (2410161): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 02:19:32] Arguments: --nthreads 4
[2025-12-16 02:19:32] Threads: 4
[2025-12-16 02:19:32] Checking for CVMFS
[2025-12-16 02:19:32] No cvmfs_config command found, will try listing directly
[2025-12-16 02:19:32] CVMFS is ok
[2025-12-16 02:19:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 02:19:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 02:19:32] Further information can be found at the LHC@home message board.
[2025-12-16 02:19:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 02:19:32] Checking for apptainer binary...
[2025-12-16 02:19:32] which: no apptainer in ((null))
[2025-12-16 02:19:32] apptainer is not installed, using version from CVMFS
[2025-12-16 02:19:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 02:19:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2025-12-16 02:19:32] apptainer works
[2025-12-16 02:19:32] Set ATHENA_PROC_NUMBER=4
[2025-12-16 02:19:32] Set ATHENA_CORE_NUMBER=4
[2025-12-16 02:19:32] Starting ATLAS job with PandaID=6931596047
[2025-12-16 02:19:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 06:16:03]  *** The last 200 lines of the pilot log: ***
[2025-12-16 06:16:03] 2025-12-16 04:59:28,227 | INFO     | monitor loop #959: job 0:6931596047 is in state 'finished'
[2025-12-16 06:16:03] 2025-12-16 04:59:28,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 06:16:03] 2025-12-16 04:59:28,883 | INFO     | time since job start (13183s) is within the limit (174528.0s)
[2025-12-16 06:16:03] 2025-12-16 04:59:30,732 | INFO     | monitor loop #960: job 0:6931596047 is in state 'finished'
[2025-12-16 06:16:03] 2025-12-16 04:59:30,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 06:16:03] 2025-12-16 04:59:30,889 | INFO     | time since job start (13185s) is within the limit (174528.0s)
[2025-12-16 06:16:03] 2025-12-16 04:59:32,895 | INFO     | time since job start (13187s) is within the limit (174528.0s)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,236 | INFO     | monitor loop #961: job 0:6931596047 is in state 'finished'
[2025-12-16 06:16:03] 2025-12-16 04:59:33,237 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,716 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 06:16:03] 2025-12-16 04:59:33,724 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2464.71335
[2025-12-16 06:16:03] 2025-12-16 04:59:33,732 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6931596047/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,733 | INFO     | extracted standard info from prmon json
[2025-12-16 06:16:03] 2025-12-16 04:59:33,733 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 06:16:03] 2025-12-16 04:59:33,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 06:16:03] 2025-12-16 04:59:33,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 06:16:03] 2025-12-16 04:59:33,734 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 06:16:03] 2025-12-16 04:59:33,739 | INFO     | fitting pss+swap vs Time
[2025-12-16 06:16:03] 2025-12-16 04:59:33,739 | INFO     | sum of square deviations: 3124858590.0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,741 | INFO     | sum of deviations: -75369226673.0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,741 | INFO     | mean x: 1765854568.5
[2025-12-16 06:16:03] 2025-12-16 04:59:33,741 | INFO     | mean y: 2424908.0092592593
[2025-12-16 06:16:03] 2025-12-16 04:59:33,741 | INFO     | intersect: 42593502043.70426
[2025-12-16 06:16:03] 2025-12-16 04:59:33,741 | INFO     | chi2: 1.805465616484946
[2025-12-16 06:16:03] 2025-12-16 04:59:33,742 | INFO     | sum of square deviations: 2912836010.0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,743 | INFO     | sum of deviations: -68417125908.0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,744 | INFO     | mean x: 1765854416.0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,744 | INFO     | mean y: 2429847.8009478673
[2025-12-16 06:16:03] 2025-12-16 04:59:33,744 | INFO     | intersect: 41479081296.73364
[2025-12-16 06:16:03] 2025-12-16 04:59:33,744 | INFO     | chi2: 1.7294966175606408
[2025-12-16 06:16:03] 2025-12-16 04:59:33,745 | INFO     | current chi2=1.7294966175606408 (change=4.207723383412255 %)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,745 | INFO     | right removable region: 210
[2025-12-16 06:16:03] 2025-12-16 04:59:33,745 | INFO     | sum of square deviations: 2912836010.0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,747 | INFO     | sum of deviations: -100034683362.0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,747 | INFO     | mean x: 1765854721.0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,747 | INFO     | mean y: 2442386.317535545
[2025-12-16 06:16:03] 2025-12-16 04:59:33,747 | INFO     | intersect: 60646679573.74776
[2025-12-16 06:16:03] 2025-12-16 04:59:33,748 | INFO     | chi2: 0.49823523795574426
[2025-12-16 06:16:03] 2025-12-16 04:59:33,748 | INFO     | current chi2=0.49823523795574426 (change=72.40405835444508 %)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,748 | INFO     | sum of square deviations: 2710627567.5
[2025-12-16 06:16:03] 2025-12-16 04:59:33,750 | INFO     | sum of deviations: -91146929834.49994
[2025-12-16 06:16:03] 2025-12-16 04:59:33,750 | INFO     | mean x: 1765854873.5
[2025-12-16 06:16:03] 2025-12-16 04:59:33,750 | INFO     | mean y: 2435678.150485437
[2025-12-16 06:16:03] 2025-12-16 04:59:33,750 | INFO     | intersect: 59380659445.44575
[2025-12-16 06:16:03] 2025-12-16 04:59:33,751 | INFO     | chi2: 0.49468938404824464
[2025-12-16 06:16:03] 2025-12-16 04:59:33,751 | INFO     | current chi2=0.49468938404824464 (change=0.7116826826717904 %)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,751 | INFO     | left removable region: 20
[2025-12-16 06:16:03] 2025-12-16 04:59:33,752 | INFO     | sum of square deviations: 2126802667.5
[2025-12-16 06:16:03] 2025-12-16 04:59:33,753 | INFO     | sum of deviations: -65054081136.5
[2025-12-16 06:16:03] 2025-12-16 04:59:33,753 | INFO     | mean x: 1765854995.5
[2025-12-16 06:16:03] 2025-12-16 04:59:33,753 | INFO     | mean y: 2425488.9736842103
[2025-12-16 06:16:03] 2025-12-16 04:59:33,753 | INFO     | intersect: 54015934080.05733
[2025-12-16 06:16:03] 2025-12-16 04:59:33,754 | INFO     | chi2: 0.3913217670345092
[2025-12-16 06:16:03] 2025-12-16 04:59:33,754 | INFO     | current memory leak: -30.59 B/s (using 190 data points, chi2=0.39)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,755 | INFO     | could have reported an average CPU frequency of 2440 MHz (11 samples)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,755 | INFO     | ..............................
[2025-12-16 06:16:03] 2025-12-16 04:59:33,755 | INFO     | . Timing measurements:
[2025-12-16 06:16:03] 2025-12-16 04:59:33,755 | INFO     | . get job = 0 s
[2025-12-16 06:16:03] 2025-12-16 04:59:33,755 | INFO     | . initial setup = 1 s
[2025-12-16 06:16:03] 2025-12-16 04:59:33,755 | INFO     | . payload setup = 5 s
[2025-12-16 06:16:03] 2025-12-16 04:59:33,755 | INFO     | . stage-in = 0 s
[2025-12-16 06:16:03] 2025-12-16 04:59:33,756 | INFO     | . payload execution = 13151 s
[2025-12-16 06:16:03] 2025-12-16 04:59:33,756 | INFO     | . stage-out = 1 s
[2025-12-16 06:16:03] 2025-12-16 04:59:33,756 | INFO     | . log creation = 0 s
[2025-12-16 06:16:03] 2025-12-16 04:59:33,756 | INFO     | ..............................
[2025-12-16 06:16:03] 2025-12-16 04:59:33,859 | INFO     | 
[2025-12-16 06:16:03] 2025-12-16 04:59:33,860 | INFO     | job summary report
[2025-12-16 06:16:03] 2025-12-16 04:59:33,860 | INFO     | --------------------------------------------------
[2025-12-16 06:16:03] 2025-12-16 04:59:33,860 | INFO     | PanDA job id: 6931596047
[2025-12-16 06:16:03] 2025-12-16 04:59:33,860 | INFO     | task id: 47899050
[2025-12-16 06:16:03] 2025-12-16 04:59:33,860 | INFO     | errors: (none)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 06:16:03] 2025-12-16 04:59:33,860 | INFO     | pilot state: finished 
[2025-12-16 06:16:03] 2025-12-16 04:59:33,860 | INFO     | transexitcode: 0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,861 | INFO     | exeerrorcode: 0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,861 | INFO     | exeerrordiag: 
[2025-12-16 06:16:03] 2025-12-16 04:59:33,861 | INFO     | exitcode: 0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,861 | INFO     | exitmsg: OK
[2025-12-16 06:16:03] 2025-12-16 04:59:33,861 | INFO     | cpuconsumptiontime: 50949 s
[2025-12-16 06:16:03] 2025-12-16 04:59:33,861 | INFO     | nevents: 400
[2025-12-16 06:16:03] 2025-12-16 04:59:33,861 | INFO     | neventsw: 0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,861 | INFO     | pid: 2421462
[2025-12-16 06:16:03] 2025-12-16 04:59:33,861 | INFO     | pgrp: 2421462
[2025-12-16 06:16:03] 2025-12-16 04:59:33,861 | INFO     | corecount: 4
[2025-12-16 06:16:03] 2025-12-16 04:59:33,862 | INFO     | event service: False
[2025-12-16 06:16:03] 2025-12-16 04:59:33,862 | INFO     | sizes: {0: 2283829, 1: 2283971, 5: 2284233, 11: 2284289, 13160: 2314470, 13161: 2323490, 13164: 2323674, 13173: 2323868}
[2025-12-16 06:16:03] 2025-12-16 04:59:33,862 | INFO     | --------------------------------------------------
[2025-12-16 06:16:03] 2025-12-16 04:59:33,862 | INFO     | 
[2025-12-16 06:16:03] 2025-12-16 04:59:33,862 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-12-16 06:16:03] 2025-12-16 04:59:33,880 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,881 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,882 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,882 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 06:16:03] 2025-12-16 04:59:33,883 | INFO     | job 6931596047 has completed (purged errors)
[2025-12-16 06:16:03] 2025-12-16 04:59:33,883 | INFO     | overall cleanup function is called
[2025-12-16 06:16:03] 2025-12-16 04:59:34,891 | INFO     | --- collectZombieJob: --- 10, [2421462]
[2025-12-16 06:16:03] 2025-12-16 04:59:34,891 | INFO     | zombie collector waiting for pid 2421462
[2025-12-16 06:16:03] 2025-12-16 04:59:34,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 06:16:03] 2025-12-16 04:59:34,891 | INFO     | collected zombie processes
[2025-12-16 06:16:03] 2025-12-16 04:59:34,891 | INFO     | will attempt to kill all subprocesses of pid=2421462
[2025-12-16 06:16:03] 2025-12-16 04:59:35,216 | INFO     | process IDs to be killed: [2421462] (in reverse order)
[2025-12-16 06:16:03] 2025-12-16 04:59:35,294 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 06:16:03] 2025-12-16 04:59:35,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 06:16:03] 2025-12-16 04:59:35,304 | INFO     | did not find any defunct processes belonging to 2421462
[2025-12-16 06:16:03] 2025-12-16 04:59:35,312 | INFO     | did not find any defunct processes belonging to 2421462
[2025-12-16 06:16:03] 2025-12-16 04:59:35,312 | INFO     | ready for new job
[2025-12-16 06:16:03] 2025-12-16 04:59:35,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 06:16:03] 2025-12-16 04:59:35,315 | INFO     | ***************************************
[2025-12-16 06:16:03] 2025-12-16 04:59:35,315 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 06:16:03] 2025-12-16 04:59:35,315 | INFO     | ***************************************
[2025-12-16 06:16:03] 2025-12-16 04:59:35,315 | INFO     | 
[2025-12-16 06:16:03] 2025-12-16 04:59:35,318 | INFO     | architecture information:
[2025-12-16 06:16:03] 2025-12-16 04:59:35,318 | INFO     | executing command: cat /etc/os-release
[2025-12-16 06:16:03] 2025-12-16 04:59:35,331 | INFO     | cat /etc/os-release:
[2025-12-16 06:16:03] NAME="CentOS Linux"
[2025-12-16 06:16:03] VERSION="7 (Core)"
[2025-12-16 06:16:03] ID="centos"
[2025-12-16 06:16:03] ID_LIKE="rhel fedora"
[2025-12-16 06:16:03] VERSION_ID="7"
[2025-12-16 06:16:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 06:16:03] ANSI_COLOR="0;31"
[2025-12-16 06:16:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 06:16:03] HOME_URL="https://www.centos.org/"
[2025-12-16 06:16:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 06:16:03] 
[2025-12-16 06:16:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 06:16:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 06:16:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 06:16:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 06:16:03] 
[2025-12-16 06:16:03] 2025-12-16 04:59:35,331 | INFO     | ***************************************
[2025-12-16 06:16:03] 2025-12-16 04:59:35,834 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-12-16 06:16:03] 2025-12-16 04:59:35,848 | INFO     | sufficient remaining disk space (1673967697920 B)
[2025-12-16 06:16:03] 2025-12-16 04:59:35,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 06:16:03] 2025-12-16 04:59:35,849 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 06:16:03] 2025-12-16 04:59:35,849 | INFO     | update_server=False
[2025-12-16 06:16:03] 2025-12-16 04:59:35,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 06:16:03] 2025-12-16 04:59:35,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 06:16:03] 2025-12-16 04:59:35,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 06:16:03] 2025-12-16 04:59:35,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:16:03] 2025-12-16 04:59:36,183 | INFO     | all payload control threads have been joined
[2025-12-16 06:16:03] 2025-12-16 04:59:36,274 | INFO     | all data control threads have been joined
[2025-12-16 06:16:03] 2025-12-16 04:59:36,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:16:03] 2025-12-16 04:59:36,745 | INFO     | aborting loop
[2025-12-16 06:16:03] 2025-12-16 04:59:36,853 | INFO     | [job] retrieve thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:36,855 | INFO     | [job] queue monitor thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:37,033 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:37,178 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:37,188 | INFO     | [payload] control thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:37,276 | INFO     | [data] control thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:37,285 | INFO     | all job control threads have been joined
[2025-12-16 06:16:03] 2025-12-16 04:59:37,656 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:37,705 | INFO     | [data] copytool_in thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:37,746 | INFO     | [job] job monitor thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:37,814 | INFO     | [job] validate thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:37,855 | INFO     | [data] copytool_out thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:37,872 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:38,168 | INFO     | [payload] validate_post thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:38,172 | INFO     | [payload] failed_post thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:38,288 | INFO     | [job] control thread has finished
[2025-12-16 06:16:03] 2025-12-16 04:59:39,851 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 06:16:03] 2025-12-16 05:00:06,416 | INFO     | PID=2414143 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 06:16:03] 2025-12-16 05:00:06,417 | INFO     | .. there are 3 such processes running
[2025-12-16 06:16:03] 2025-12-16 05:00:06,418 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 06:16:03] 2025-12-16 05:00:06,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 06:16:03] 2025-12-16 05:00:06,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 06:16:03] 2025-12-16 05:00:06,500 | INFO     | [monitor] cgroup control has ended
[2025-12-16 06:16:03] 2025-12-16 05:00:06,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22505193252672)>', '<ExcThread(monitor, started 22504598882048)>']
[2025-12-16 06:16:03] 2025-12-16 05:00:07,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 06:16:03] 2025-12-16 05:00:07,423 | INFO     | [monitor] control thread has ended
[2025-12-16 06:16:03] 2025-12-16 05:00:11,811 | INFO     | all workflow threads have been joined
[2025-12-16 06:16:03] 2025-12-16 05:00:11,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 06:16:03] 2025-12-16 05:00:11,812 | INFO     | traces error code: 0
[2025-12-16 06:16:03] 2025-12-16 05:00:11,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 06:16:03] 2025-12-16 05:00:11,922 [wrapper] ==== pilot stdout END ====
[2025-12-16 06:16:03] 2025-12-16 05:00:11,925 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 06:16:03] 2025-12-16 05:00:11,927 [wrapper] pilotpid: 2414143
[2025-12-16 06:16:03] 2025-12-16 05:00:11,930 [wrapper] Pilot exit status: 0
[2025-12-16 06:16:03] 2025-12-16 05:00:11,940 [wrapper] pandaids: 6931596047
[2025-12-16 06:16:03] 2025-12-16 05:00:11,997 [wrapper] cleanup supervisor_pilot 2587780 2414144
[2025-12-16 06:16:03] 2025-12-16 05:00:11,999 [wrapper] Test setup, not cleaning
[2025-12-16 06:16:03] 2025-12-16 05:00:12,002 [wrapper] apfmon messages muted
[2025-12-16 06:16:03] 2025-12-16 05:00:12,004 [wrapper] ==== wrapper stdout END ====
[2025-12-16 06:16:03] 2025-12-16 05:00:12,006 [wrapper] ==== wrapper stderr END ====
[2025-12-16 06:16:03]  *** Error codes and diagnostics ***
[2025-12-16 06:16:03]     "exeErrorCode": 0,
[2025-12-16 06:16:03]     "exeErrorDiag": "",
[2025-12-16 06:16:03]     "pilotErrorCode": 0,
[2025-12-16 06:16:03]     "pilotErrorDiag": "",
[2025-12-16 06:16:03]  *** Listing of results directory ***
[2025-12-16 06:16:03] total 375636
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc    579449 Dec 15 11:33 pilot3.tar.gz
[2025-12-16 06:16:03] -rwx------ 1 boinc boinc     36322 Dec 15 11:34 runpilot2-wrapper.sh
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc      5112 Dec 15 11:34 queuedata.json
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc       100 Dec 16 02:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 06:16:03] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 02:19 run_atlas
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc       105 Dec 16 02:19 job.xml
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc      6424 Dec 16 02:19 init_data.xml
[2025-12-16 06:16:03] -rw-r--r-- 2 boinc boinc 196543231 Dec 16 02:19 EVNT.47899048._000083.pool.root.1
[2025-12-16 06:16:03] -rw-r--r-- 2 boinc boinc     15847 Dec 16 02:19 start_atlas.sh
[2025-12-16 06:16:03] drwxrwx--x 2 boinc boinc      4096 Dec 16 02:19 shared
[2025-12-16 06:16:03] -rw-r--r-- 2 boinc boinc    592378 Dec 16 02:19 input.tar.gz
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc         0 Dec 16 02:19 boinc_lockfile
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc      2489 Dec 16 02:19 pandaJob.out
[2025-12-16 06:16:03] -rw------- 1 boinc boinc    994531 Dec 16 02:19 agis_schedconf.cvmfs.json
[2025-12-16 06:16:03] drwx------ 5 boinc boinc      4096 Dec 16 02:19 pilot3
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc       529 Dec 16 05:58 boinc_task_state.xml
[2025-12-16 06:16:03] -rw------- 1 boinc boinc 179682610 Dec 16 05:58 HITS.47899050._002058.pool.root.1
[2025-12-16 06:16:03] -rw------- 1 boinc boinc      1035 Dec 16 05:59 memory_monitor_summary.json
[2025-12-16 06:16:03] -rw------- 1 boinc boinc   1516240 Dec 16 05:59 agis_ddmendpoints.agis.ALL.json
[2025-12-16 06:16:03] -rw------- 1 boinc boinc    381973 Dec 16 05:59 log.47899050._002058.job.log.tgz.1
[2025-12-16 06:16:03] -rw------- 1 boinc boinc      7832 Dec 16 05:59 heartbeat.json
[2025-12-16 06:16:03] -rw------- 1 boinc boinc        95 Dec 16 06:00 pilot_heartbeat.json
[2025-12-16 06:16:03] -rw------- 1 boinc boinc      4834 Dec 16 06:00 pilotlog.txt
[2025-12-16 06:16:03] -rw------- 1 boinc boinc   1871277 Dec 16 06:00 log.47899050._002058.job.log.1
[2025-12-16 06:16:03] -rw------- 1 boinc boinc       357 Dec 16 06:00 output.list
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc       620 Dec 16 06:00 runtime_log
[2025-12-16 06:16:03] -rw------- 1 boinc boinc   2273280 Dec 16 06:00 result.tar.gz
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc      9206 Dec 16 06:00 runtime_log.err
[2025-12-16 06:16:03] -rw------- 1 boinc boinc       666 Dec 16 06:00 WZnLDmL5Kp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMmXKDm7sGULm.diag
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc        26 Dec 16 06:15 wrapper_checkpoint.txt
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc      8192 Dec 16 06:16 boinc_mmap_file
[2025-12-16 06:16:03] -rw-r--r-- 1 boinc boinc     21118 Dec 16 06:16 stderr.txt
[2025-12-16 06:16:03] HITS file was successfully produced:
[2025-12-16 06:16:03] -rw------- 1 boinc boinc 179682610 Dec 16 05:58 shared/HITS.pool.root.1
[2025-12-16 06:16:03]  *** Contents of shared directory: ***
[2025-12-16 06:16:03] total 370236
[2025-12-16 06:16:03] -rw-r--r-- 2 boinc boinc 196543231 Dec 16 02:19 ATLAS.root_0
[2025-12-16 06:16:03] -rw-r--r-- 2 boinc boinc     15847 Dec 16 02:19 start_atlas.sh
[2025-12-16 06:16:03] -rw-r--r-- 2 boinc boinc    592378 Dec 16 02:19 input.tar.gz
[2025-12-16 06:16:03] -rw------- 1 boinc boinc 179682610 Dec 16 05:58 HITS.pool.root.1
[2025-12-16 06:16:03] -rw------- 1 boinc boinc   2273280 Dec 16 06:00 result.tar.gz
06:16:04 (2410161): run_atlas exited; CPU time 51447.376093
06:16:04 (2410161): called boinc_finish(0)

</stderr_txt>
]]>

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