Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:43:39 (4191667): wrapper (7.7.26015): starting
13:43:39 (4191667): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 13:43:39] Arguments: --nthreads 12
[2025-12-15 13:43:39] Threads: 12
[2025-12-15 13:43:39] Checking for CVMFS
[2025-12-15 13:43:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 13:43:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 13:43:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 13:43:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 13:43:40] 2.11.5.0 2104101 56280 298004 154047 3 525 36401309 45568001 14880 130560 0 514876743 99.789 334905022 25080 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-12-15 13:43:40] CVMFS is ok
[2025-12-15 13:43:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 13:43:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 13:43:40] Further information can be found at the LHC@home message board.
[2025-12-15 13:43:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 13:43:40] Checking for apptainer binary...
[2025-12-15 13:43:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 13:43:40] Running /usr/bin/apptainer --version
[2025-12-15 13:43:40] apptainer version 1.4.1-1.el9
[2025-12-15 13:43:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 13:43:40] wns0090.triumf.lcg
[2025-12-15 13:43:40] apptainer works
[2025-12-15 13:43:40] Set ATHENA_PROC_NUMBER=12
[2025-12-15 13:43:40] Set ATHENA_CORE_NUMBER=12
[2025-12-15 13:43:40] Starting ATLAS job with PandaID=6929808614
[2025-12-15 13:43:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 13:48:02]  *** The last 200 lines of the pilot log: ***
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | WARNING  | found no stored workdir sizes
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | INFO     | will not add max space = 0 B to job metrics
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | WARNING  | wrong length of table data, x=[1765835079.0], y=[1495.0] (must be same and length>=4)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | could have reported an average CPU frequency of 2570 MHz (4 samples)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | ..............................
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | . Timing measurements:
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | . get job = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | . initial setup = 3 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . payload setup = 11 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . stage-in = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . payload execution = 35 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . stage-out = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . log creation = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | ..............................
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929808614/pilotlog.txt
[2025-12-15 13:48:02] 2025-12-15 21:47:12,020 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-15 13:48:02] - Log from pilotlog.txt -
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | WARNING  | found no stored workdir sizes
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | INFO     | will not add max space = 0 B to job metrics
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | WARNING  | wrong length of table data, x=[1765835079.0], y=[1495.0] (must be same and length>=4)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | could have reported an average CPU frequency of 2570 MHz (4 samples)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | ..............................
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | . Timing measurements:
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | . get job = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | . initial setup = 3 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . payload setup = 11 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . stage-in = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . payload execution = 35 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . stage-out = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . log creation = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | ..............................
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929808614/pilotlog.txt
[2025-12-15 13:48:02] 2025-12-15 21:47:12,021 | WARNING  | 
[2025-12-15 13:48:02] [begin log extracts]
[2025-12-15 13:48:02] - Log from pilotlog.txt -
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | WARNING  | found no stored workdir sizes
[2025-12-15 13:48:02] 2025-12-15 21:47:11,999 | INFO     | will not add max space = 0 B to job metrics
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | WARNING  | wrong length of table data, x=[1765835079.0], y=[1495.0] (must be same and length>=4)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | could have reported an average CPU frequency of 2570 MHz (4 samples)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | ..............................
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | . Timing measurements:
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | . get job = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,000 | INFO     | . initial setup = 3 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . payload setup = 11 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . stage-in = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . payload execution = 35 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . stage-out = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | . log creation = 0 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | ..............................
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 13:48:02] 2025-12-15 21:47:12,001 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929808614/pilotlog.txt
[2025-12-15 13:48:02] [end log extracts]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,021 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,022 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | 
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | job summary report
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | --------------------------------------------------
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | PanDA job id: 6929808614
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | task id: 47898826
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-15 13:44:57,887 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | pilot state: failed 
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | transexitcode: 65
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | exeerrorcode: 65
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,262 | INFO     | exitcode: 65
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | cpuconsumptiontime: 17 s
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | nevents: 0
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | neventsw: 0
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | pid: 13875
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | pgrp: 13875
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | corecount: 12
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | event service: False
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | sizes: {0: 2283786, 1: 2283985, 10: 2284247, 11: 2284275, 51: 2311898, 176: 2312036}
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | --------------------------------------------------
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | 
[2025-12-15 13:48:02] 2025-12-15 21:47:12,263 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-15 13:48:02] 2025-12-15 21:47:12,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,276 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,276 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,276 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | job 6929808614 has completed (purged errors)
[2025-12-15 13:48:02] 2025-12-15 21:47:12,277 | INFO     | overall cleanup function is called
[2025-12-15 13:48:02] 2025-12-15 21:47:13,284 | INFO     | --- collectZombieJob: --- 10, [13875]
[2025-12-15 13:48:02] 2025-12-15 21:47:13,284 | INFO     | zombie collector waiting for pid 13875
[2025-12-15 13:48:02] 2025-12-15 21:47:13,284 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 13:48:02] 2025-12-15 21:47:13,284 | INFO     | collected zombie processes
[2025-12-15 13:48:02] 2025-12-15 21:47:13,284 | INFO     | will attempt to kill all subprocesses of pid=13875
[2025-12-15 13:48:02] 2025-12-15 21:47:13,531 | INFO     | process IDs to be killed: [13875] (in reverse order)
[2025-12-15 13:48:02] 2025-12-15 21:47:13,602 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 13:48:02] 2025-12-15 21:47:13,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 13:48:02] 2025-12-15 21:47:13,612 | INFO     | did not find any defunct processes belonging to 13875
[2025-12-15 13:48:02] 2025-12-15 21:47:13,624 | INFO     | did not find any defunct processes belonging to 13875
[2025-12-15 13:48:02] 2025-12-15 21:47:13,624 | INFO     | ready for new job
[2025-12-15 13:48:02] 2025-12-15 21:47:13,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 13:48:02] 2025-12-15 21:47:13,625 | INFO     | ***************************************
[2025-12-15 13:48:02] 2025-12-15 21:47:13,625 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 13:48:02] 2025-12-15 21:47:13,625 | INFO     | ***************************************
[2025-12-15 13:48:02] 2025-12-15 21:47:13,626 | INFO     | 
[2025-12-15 13:48:02] 2025-12-15 21:47:13,627 | INFO     | architecture information:
[2025-12-15 13:48:02] 2025-12-15 21:47:13,628 | INFO     | executing command: cat /etc/os-release
[2025-12-15 13:48:02] 2025-12-15 21:47:13,682 | INFO     | cat /etc/os-release:
[2025-12-15 13:48:02] NAME="CentOS Linux"
[2025-12-15 13:48:02] VERSION="7 (Core)"
[2025-12-15 13:48:02] ID="centos"
[2025-12-15 13:48:02] ID_LIKE="rhel fedora"
[2025-12-15 13:48:02] VERSION_ID="7"
[2025-12-15 13:48:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 13:48:02] ANSI_COLOR="0;31"
[2025-12-15 13:48:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 13:48:02] HOME_URL="https://www.centos.org/"
[2025-12-15 13:48:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 13:48:02] 
[2025-12-15 13:48:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 13:48:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 13:48:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 13:48:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 13:48:02] 
[2025-12-15 13:48:02] 2025-12-15 21:47:13,682 | INFO     | ***************************************
[2025-12-15 13:48:02] 2025-12-15 21:47:14,185 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-15 13:48:02] 2025-12-15 21:47:14,243 | INFO     | sufficient remaining disk space (1950542200832 B)
[2025-12-15 13:48:02] 2025-12-15 21:47:14,243 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 13:48:02] 2025-12-15 21:47:14,243 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 13:48:02] 2025-12-15 21:47:14,243 | INFO     | update_server=False
[2025-12-15 13:48:02] 2025-12-15 21:47:14,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 13:48:02] 2025-12-15 21:47:14,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 13:48:02] 2025-12-15 21:47:14,354 | INFO     | all payload control threads have been joined
[2025-12-15 13:48:02] 2025-12-15 21:47:14,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 13:48:02] 2025-12-15 21:47:14,854 | INFO     | aborting loop
[2025-12-15 13:48:02] 2025-12-15 21:47:14,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 13:48:02] 2025-12-15 21:47:15,200 | INFO     | all data control threads have been joined
[2025-12-15 13:48:02] 2025-12-15 21:47:15,224 | INFO     | all job control threads have been joined
[2025-12-15 13:48:02] 2025-12-15 21:47:15,249 | INFO     | [job] retrieve thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:15,255 | INFO     | [job] queue monitor thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:15,266 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 13:48:02] 2025-12-15 21:47:15,373 | INFO     | [payload] control thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:15,551 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:15,552 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:15,625 | INFO     | [job] validate thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:15,770 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:15,860 | INFO     | [job] job monitor thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:15,869 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:15,933 | INFO     | [data] copytool_in thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:16,186 | INFO     | [payload] failed_post thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:16,208 | INFO     | [data] control thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:16,230 | INFO     | [job] control thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:16,765 | INFO     | [payload] validate_post thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:17,287 | INFO     | [data] copytool_out thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:18,970 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 13:48:02] 2025-12-15 21:47:45,059 | INFO     | PID=6306 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-15 13:48:02] 2025-12-15 21:47:45,060 | INFO     | .. there are 35 such processes running
[2025-12-15 13:48:02] 2025-12-15 21:47:45,060 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 13:48:02] 2025-12-15 21:47:45,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 13:48:02] 2025-12-15 21:47:45,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 13:48:02] 2025-12-15 21:47:56,953 | INFO     | [monitor] cgroup control has ended
[2025-12-15 13:48:02] 2025-12-15 21:47:57,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140656982042432)>', '<ExcThread(monitor, started 140656076908288)>']
[2025-12-15 13:48:02] 2025-12-15 21:47:57,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 13:48:02] 2025-12-15 21:47:57,129 | INFO     | [monitor] control thread has ended
[2025-12-15 13:48:02] 2025-12-15 21:48:02,129 | INFO     | all workflow threads have been joined
[2025-12-15 13:48:02] 2025-12-15 21:48:02,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 13:48:02] 2025-12-15 21:48:02,130 | INFO     | traces error code: 0
[2025-12-15 13:48:02] 2025-12-15 21:48:02,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 13:48:02] 2025-12-15 21:48:02,234 [wrapper] ==== pilot stdout END ====
[2025-12-15 13:48:02] 2025-12-15 21:48:02,235 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 13:48:02] 2025-12-15 21:48:02,237 [wrapper] pilotpid: 6306
[2025-12-15 13:48:02] 2025-12-15 21:48:02,238 [wrapper] Pilot exit status: 0
[2025-12-15 13:48:02] 2025-12-15 21:48:02,259 [wrapper] pandaids: 6929808614
[2025-12-15 13:48:02] 2025-12-15 21:48:02,327 [wrapper] cleanup supervisor_pilot    6313 6307
[2025-12-15 13:48:02] 2025-12-15 21:48:02,355 [wrapper] Test setup, not cleaning
[2025-12-15 13:48:02] 2025-12-15 21:48:02,357 [wrapper] apfmon messages muted
[2025-12-15 13:48:02] 2025-12-15 21:48:02,359 [wrapper] ==== wrapper stdout END ====
[2025-12-15 13:48:02] 2025-12-15 21:48:02,360 [wrapper] ==== wrapper stderr END ====
[2025-12-15 13:48:02]  *** Error codes and diagnostics ***
[2025-12-15 13:48:02]     "exeErrorCode": 65,
[2025-12-15 13:48:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-15 13:48:02]     "pilotErrorCode": 1305,
[2025-12-15 13:48:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-15 13:48:02]  *** Listing of results directory ***
[2025-12-15 13:48:02] total 225208
[2025-12-15 13:48:02] -rwx------. 1 boinc boinc     36322 Dec 15 07:55 runpilot2-wrapper.sh
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc      5112 Dec 15 07:57 queuedata.json
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc    579449 Dec 15 07:57 pilot3.tar.gz
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc       100 Dec 15 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 13:48:02] -rwxr-xr-x. 1 boinc boinc      7986 Dec 15 13:43 run_atlas
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc       105 Dec 15 13:43 job.xml
[2025-12-15 13:48:02] -rw-r--r--. 2 boinc boinc 226480627 Dec 15 13:43 EVNT.47898824._000098.pool.root.1
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc      6596 Dec 15 13:43 init_data.xml
[2025-12-15 13:48:02] -rw-r--r--. 2 boinc boinc     15847 Dec 15 13:43 start_atlas.sh
[2025-12-15 13:48:02] drwxrwx--x. 2 boinc boinc      4096 Dec 15 13:43 shared
[2025-12-15 13:48:02] -rw-r--r--. 2 boinc boinc    592394 Dec 15 13:43 input.tar.gz
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc         0 Dec 15 13:43 boinc_lockfile
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc      2513 Dec 15 13:43 pandaJob.out
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc    994539 Dec 15 13:43 agis_schedconf.cvmfs.json
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc   1516240 Dec 15 13:43 agis_ddmendpoints.agis.ALL.json
[2025-12-15 13:48:02] drwx------. 5 boinc boinc      4096 Dec 15 13:43 pilot3
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc       523 Dec 15 13:44 boinc_task_state.xml
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc       954 Dec 15 13:45 memory_monitor_summary.json
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc     21166 Dec 15 13:45 log.47898826._002496.job.log.tgz.1
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc        95 Dec 15 13:46 pilot_heartbeat.json
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc      8387 Dec 15 13:47 heartbeat.json
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc        22 Dec 15 13:47 wrapper_checkpoint.txt
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc      8192 Dec 15 13:47 boinc_mmap_file
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc      4820 Dec 15 13:48 pilotlog.txt
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc     86050 Dec 15 13:48 log.47898826._002496.job.log.1
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc       188 Dec 15 13:48 output.list
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc       620 Dec 15 13:48 runtime_log
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc    122880 Dec 15 13:48 result.tar.gz
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc      8636 Dec 15 13:48 runtime_log.err
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc       644 Dec 15 13:48 F6sNDmZ6Pp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUvTKDmm3U6cm.diag
[2025-12-15 13:48:02] -rw-r--r--. 1 boinc boinc     21605 Dec 15 13:48 stderr.txt
[2025-12-15 13:48:02] No HITS result produced
[2025-12-15 13:48:02]  *** Contents of shared directory: ***
[2025-12-15 13:48:02] total 221896
[2025-12-15 13:48:02] -rw-r--r--. 2 boinc boinc 226480627 Dec 15 13:43 ATLAS.root_0
[2025-12-15 13:48:02] -rw-r--r--. 2 boinc boinc     15847 Dec 15 13:43 start_atlas.sh
[2025-12-15 13:48:02] -rw-r--r--. 2 boinc boinc    592394 Dec 15 13:43 input.tar.gz
[2025-12-15 13:48:02] -rw-------. 1 boinc boinc    122880 Dec 15 13:48 result.tar.gz
13:48:04 (4191667): run_atlas exited; CPU time 24.235812
13:48:04 (4191667): called boinc_finish(0)

</stderr_txt>
]]>

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