Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:06:38 (1368275): wrapper (7.7.26015): starting
10:06:38 (1368275): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 10:06:38] Arguments: --nthreads 4
[2025-12-16 10:06:38] Threads: 4
[2025-12-16 10:06:38] Checking for CVMFS
[2025-12-16 10:06:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 10:06:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 10:06:38] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 10:06:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 10:06:38] 2.9.2.0 31218 4745 101008 154064 1 56 19078212 36864001 0 130560 0 3516074 99.991 170674 9429 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 10:06:38] CVMFS is ok
[2025-12-16 10:06:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 10:06:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 10:06:38] Further information can be found at the LHC@home message board.
[2025-12-16 10:06:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 10:06:38] Checking for apptainer binary...
[2025-12-16 10:06:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 10:06:38] Running /usr/bin/apptainer --version
[2025-12-16 10:06:38] apptainer version 1.4.1-1.1
[2025-12-16 10:06:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 10:06:38] thA332a
[2025-12-16 10:06:38] apptainer works
[2025-12-16 10:06:38] Set ATHENA_PROC_NUMBER=4
[2025-12-16 10:06:38] Set ATHENA_CORE_NUMBER=4
[2025-12-16 10:06:38] Starting ATLAS job with PandaID=6929808367
[2025-12-16 10:06:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 11:46:10]  *** The last 200 lines of the pilot log: ***
[2025-12-16 11:46:10] ID_LIKE="rhel fedora"
[2025-12-16 11:46:10] VERSION_ID="7"
[2025-12-16 11:46:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 11:46:10] ANSI_COLOR="0;31"
[2025-12-16 11:46:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 11:46:10] HOME_URL="https://www.centos.org/"
[2025-12-16 11:46:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 11:46:10] 
[2025-12-16 11:46:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 11:46:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 11:46:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 11:46:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 11:46:10] 
[2025-12-16 11:46:10] 2025-12-16 10:45:40,609 | INFO     | ***************************************
[2025-12-16 11:46:10] 2025-12-16 10:45:41,113 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-16 11:46:10] 2025-12-16 10:45:41,129 | INFO     | sufficient remaining disk space (341269544960 B)
[2025-12-16 11:46:10] 2025-12-16 10:45:41,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 11:46:10] 2025-12-16 10:45:41,130 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 11:46:10] 2025-12-16 10:45:41,130 | INFO     | update_server=False
[2025-12-16 11:46:10] 2025-12-16 10:45:41,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 11:46:10] 2025-12-16 10:45:41,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 11:46:10] 2025-12-16 10:45:41,512 | INFO     | all job control threads have been joined
[2025-12-16 11:46:10] 2025-12-16 10:45:41,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 11:46:10] 2025-12-16 10:45:41,693 | INFO     | aborting loop
[2025-12-16 11:46:10] 2025-12-16 10:45:41,765 | INFO     | all data control threads have been joined
[2025-12-16 11:46:10] 2025-12-16 10:45:42,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 11:46:10] 2025-12-16 10:45:42,136 | INFO     | [job] retrieve thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:42,136 | INFO     | [job] queue monitor thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:42,467 | INFO     | all payload control threads have been joined
[2025-12-16 11:46:10] 2025-12-16 10:45:42,518 | INFO     | [job] control thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:42,574 | INFO     | [payload] validate_post thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:42,698 | INFO     | [job] job monitor thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:42,709 | INFO     | [job] validate thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:42,771 | INFO     | [data] control thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:42,798 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:42,917 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:43,114 | INFO     | [data] copytool_in thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:43,204 | INFO     | [payload] failed_post thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:43,473 | INFO     | [payload] control thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:43,533 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:44,065 | INFO     | [data] copytool_out thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:44,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 11:46:10] 2025-12-16 10:45:48,599 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:51,838 | INFO     | job.realtimelogging is not enabled
[2025-12-16 11:46:10] 2025-12-16 10:45:52,715 | INFO     | [monitor] cgroup control has ended
[2025-12-16 11:46:10] 2025-12-16 10:45:52,844 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 11:46:10] 2025-12-16 10:45:53,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140358941611840)>', '<ExcThread(monitor, started 140358138697472)>']
[2025-12-16 11:46:10] 2025-12-16 10:45:58,652 | INFO     | all workflow threads have been joined
[2025-12-16 11:46:10] 2025-12-16 10:45:58,652 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 11:46:10] 2025-12-16 10:45:58,653 | INFO     | traces error code: 0
[2025-12-16 11:46:10] 2025-12-16 10:45:58,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 11:46:10] 2025-12-16 10:46:10,647 | INFO     | PID=1372069 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 11:46:10] 2025-12-16 10:46:10,647 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 11:46:10] 2025-12-16 10:46:10,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 11:46:10] 2025-12-16 10:46:10,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 11:46:10] 2025-12-16 10:46:10,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 11:46:10] 2025-12-16 10:46:10,648 | INFO     | [monitor] control thread has ended
[2025-12-16 11:46:10] 2025-12-16 10:46:10,721 [wrapper] ==== pilot stdout END ====
[2025-12-16 11:46:10] 2025-12-16 10:46:10,725 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 11:46:10] 2025-12-16 10:46:10,729 [wrapper] pilotpid: 1372069
[2025-12-16 11:46:10] 2025-12-16 10:46:10,733 [wrapper] Pilot exit status: 0
[2025-12-16 11:46:10] 2025-12-16 10:46:10,744 [wrapper] pandaids: 6929808367
[2025-12-16 11:46:10] 2025-12-16 10:46:10,764 [wrapper] cleanup supervisor_pilot 1390963 1372070
[2025-12-16 11:46:10] 2025-12-16 10:46:10,768 [wrapper] Test setup, not cleaning
[2025-12-16 11:46:10] 2025-12-16 10:46:10,771 [wrapper] apfmon messages muted
[2025-12-16 11:46:10] 2025-12-16 10:46:10,775 [wrapper] ==== wrapper stdout END ====
[2025-12-16 11:46:10] 2025-12-16 10:46:10,778 [wrapper] ==== wrapper stderr END ====
[2025-12-16 11:46:10]  *** Error codes and diagnostics ***
[2025-12-16 11:46:10]     "exeErrorCode": 0,
[2025-12-16 11:46:10]     "exeErrorDiag": "",
[2025-12-16 11:46:10]     "pilotErrorCode": 0,
[2025-12-16 11:46:10]     "pilotErrorDiag": "",
[2025-12-16 11:46:10]  *** Listing of results directory ***
[2025-12-16 11:46:10] total 443396
[2025-12-16 11:46:10] -rwx------ 1 boinc boinc     36322 Dec 15 16:55 runpilot2-wrapper.sh
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc      5112 Dec 15 16:57 queuedata.json
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc    579449 Dec 15 16:57 pilot3.tar.gz
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc       100 Dec 16 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 11:46:10] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 10:06 run_atlas
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc       105 Dec 16 10:06 job.xml
[2025-12-16 11:46:10] -rw-r--r-- 2 boinc boinc 224241231 Dec 16 10:06 EVNT.47898824._000088.pool.root.1
[2025-12-16 11:46:10] drwxrwx--x 2 boinc boinc      4096 Dec 16 10:06 shared
[2025-12-16 11:46:10] -rw-r--r-- 2 boinc boinc    592387 Dec 16 10:06 input.tar.gz
[2025-12-16 11:46:10] -rw-r--r-- 2 boinc boinc     15847 Dec 16 10:06 start_atlas.sh
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc         0 Dec 16 10:06 boinc_setup_complete
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc      6370 Dec 16 10:06 init_data.xml
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc         0 Dec 16 10:06 boinc_lockfile
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc      2513 Dec 16 10:06 pandaJob.out
[2025-12-16 11:46:10] -rw------- 1 boinc boinc    994528 Dec 16 10:06 agis_schedconf.cvmfs.json
[2025-12-16 11:46:10] -rw------- 1 boinc boinc   1516240 Dec 16 10:06 agis_ddmendpoints.agis.ALL.json
[2025-12-16 11:46:10] drwx------ 5 boinc boinc      4096 Dec 16 10:06 pilot3
[2025-12-16 11:46:10] -rw------- 1 boinc boinc 223573205 Dec 16 11:45 HITS.47898826._002249.pool.root.1
[2025-12-16 11:46:10] -rw------- 1 boinc boinc        95 Dec 16 11:45 pilot_heartbeat.json
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc       530 Dec 16 11:45 boinc_task_state.xml
[2025-12-16 11:46:10] -rw------- 1 boinc boinc      1016 Dec 16 11:45 memory_monitor_summary.json
[2025-12-16 11:46:10] -rw------- 1 boinc boinc    297287 Dec 16 11:45 log.47898826._002249.job.log.tgz.1
[2025-12-16 11:46:10] -rw------- 1 boinc boinc      7766 Dec 16 11:45 heartbeat.json
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc      8192 Dec 16 11:45 boinc_mmap_file
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc        27 Dec 16 11:45 wrapper_checkpoint.txt
[2025-12-16 11:46:10] -rw------- 1 boinc boinc       747 Dec 16 11:46 pilotlog.txt
[2025-12-16 11:46:10] -rw------- 1 boinc boinc    861997 Dec 16 11:46 log.47898826._002249.job.log.1
[2025-12-16 11:46:10] -rw------- 1 boinc boinc       357 Dec 16 11:46 output.list
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc       620 Dec 16 11:46 runtime_log
[2025-12-16 11:46:10] -rw------- 1 boinc boinc   1177600 Dec 16 11:46 result.tar.gz
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc      8902 Dec 16 11:46 runtime_log.err
[2025-12-16 11:46:10] -rw------- 1 boinc boinc       660 Dec 16 11:46 JDRKDmQ6Pp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKuTKDm1a5W1m.diag
[2025-12-16 11:46:10] -rw-r--r-- 1 boinc boinc      8684 Dec 16 11:46 stderr.txt
[2025-12-16 11:46:10] HITS file was successfully produced:
[2025-12-16 11:46:10] -rw------- 1 boinc boinc 223573205 Dec 16 11:45 shared/HITS.pool.root.1
[2025-12-16 11:46:10]  *** Contents of shared directory: ***
[2025-12-16 11:46:10] total 439080
[2025-12-16 11:46:10] -rw-r--r-- 2 boinc boinc 224241231 Dec 16 10:06 ATLAS.root_0
[2025-12-16 11:46:10] -rw-r--r-- 2 boinc boinc    592387 Dec 16 10:06 input.tar.gz
[2025-12-16 11:46:10] -rw-r--r-- 2 boinc boinc     15847 Dec 16 10:06 start_atlas.sh
[2025-12-16 11:46:10] -rw------- 1 boinc boinc 223573205 Dec 16 11:45 HITS.pool.root.1
[2025-12-16 11:46:10] -rw------- 1 boinc boinc   1177600 Dec 16 11:46 result.tar.gz
11:46:33 (1368275): run_atlas exited; CPU time 22599.211249
11:46:33 (1368275): called boinc_finish(0)

</stderr_txt>
]]>

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