Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:14:17 (5630): wrapper (7.7.26015): starting
16:14:17 (5630): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 16:14:17] Arguments: --nthreads 12
[2025-12-15 16:14:17] Threads: 12
[2025-12-15 16:14:17] Checking for CVMFS
[2025-12-15 16:14:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 16:14:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 16:14:18] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 16:14:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 16:14:18] 2.11.2.0 2937 315568 93984 154046 2 57 15246006 20275201 1 130560 1 140137750 99.966 18911937 15836 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 16:14:18] CVMFS is ok
[2025-12-15 16:14:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 16:14:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 16:14:18] Further information can be found at the LHC@home message board.
[2025-12-15 16:14:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 16:14:18] Checking for apptainer binary...
[2025-12-15 16:14:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 16:14:18] Running /usr/bin/apptainer --version
[2025-12-15 16:14:18] apptainer version 1.3.2-1.el7
[2025-12-15 16:14:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 16:14:19] c-205-8.aglt2.org
[2025-12-15 16:14:19] apptainer works
[2025-12-15 16:14:19] Set ATHENA_PROC_NUMBER=12
[2025-12-15 16:14:19] Set ATHENA_CORE_NUMBER=12
[2025-12-15 16:14:19] Starting ATLAS job with PandaID=6929808261
[2025-12-15 16:14:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 17:32:49]  *** The last 200 lines of the pilot log: ***
[2025-12-15 17:32:49]  replicas=None
[2025-12-15 17:32:49]  scope=mc23_13p6TeV
[2025-12-15 17:32:49]  status=None
[2025-12-15 17:32:49]  status_code=0
[2025-12-15 17:32:49]  storage_token=
[2025-12-15 17:32:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929808261/log.47886831._008572.job.log.tgz.1
[2025-12-15 17:32:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/55/log.47886831._008572.job.log.tgz.1
[2025-12-15 17:32:49]  workdir=None
[2025-12-15 17:32:49] ]
[2025-12-15 17:32:49] 2025-12-15 22:31:54,666 | INFO     | transferring file log.47886831._008572.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929808261/log.47886831._008572.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-15 17:32:49] 2025-12-15 22:31:54,666 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929808261/log.47886831._008572.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._008572.job
[2025-12-15 17:32:49] 2025-12-15 22:31:54,688 | INFO     | adding to output.list: log.47886831._008572.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/55/log.47886831._008572.job.log.tg
[2025-12-15 17:32:49] 2025-12-15 22:31:54,689 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-15 17:32:49] 2025-12-15 22:31:54,690 | INFO     | summary of transferred files:
[2025-12-15 17:32:49] 2025-12-15 22:31:54,690 | INFO     |  -- lfn=log.47886831._008572.job.log.tgz.1, status_code=0, status=transferred
[2025-12-15 17:32:49] 2025-12-15 22:31:54,690 | INFO     | stage-out finished correctly
[2025-12-15 17:32:49] 2025-12-15 22:31:55,139 | INFO     | time since job start (4640s) is within the limit (174528.0s)
[2025-12-15 17:32:49] 2025-12-15 22:31:55,882 | INFO     | monitor loop #345: job 0:6929808261 is in state 'finished'
[2025-12-15 17:32:49] 2025-12-15 22:31:55,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 17:32:49] 2025-12-15 22:31:57,145 | INFO     | time since job start (4642s) is within the limit (174528.0s)
[2025-12-15 17:32:49] 2025-12-15 22:31:58,222 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-15 17:32:49] 2025-12-15 22:31:58,348 | INFO     | job 6929808261 has state=finished
[2025-12-15 17:32:49] 2025-12-15 22:31:58,348 | INFO     | preparing for final server update for job 6929808261 in state='finished'
[2025-12-15 17:32:49] 2025-12-15 22:31:58,349 | INFO     | this job has now completed (state=finished)
[2025-12-15 17:32:49] 2025-12-15 22:31:58,349 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-15 17:32:49] 2025-12-15 22:31:58,349 | INFO     | log transfer has been attempted: DONE
[2025-12-15 17:32:49] 2025-12-15 22:31:58,350 | INFO     | job 6929808261 has finished - writing final server update
[2025-12-15 17:32:49] 2025-12-15 22:31:58,350 | INFO     | total number of processed events: 400 (read)
[2025-12-15 17:32:49] 2025-12-15 22:31:58,351 | INFO     | executing command: lscpu
[2025-12-15 17:32:49] 2025-12-15 22:31:58,381 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 17:32:49] 2025-12-15 22:31:58,385 | INFO     | monitor loop #346: job 0:6929808261 is in state 'finished'
[2025-12-15 17:32:49] 2025-12-15 22:31:58,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 17:32:49] 2025-12-15 22:31:59,151 | INFO     | time since job start (4644s) is within the limit (174528.0s)
[2025-12-15 17:32:49] 2025-12-15 22:32:00,889 | INFO     | monitor loop #347: job 0:6929808261 is in state 'finished'
[2025-12-15 17:32:49] 2025-12-15 22:32:00,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 17:32:49] 2025-12-15 22:32:01,156 | INFO     | time since job start (4646s) is within the limit (174528.0s)
[2025-12-15 17:32:49] 2025-12-15 22:32:03,161 | INFO     | time since job start (4648s) is within the limit (174528.0s)
[2025-12-15 17:32:49] 2025-12-15 22:32:03,392 | INFO     | monitor loop #348: job 0:6929808261 is in state 'finished'
[2025-12-15 17:32:49] 2025-12-15 22:32:03,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 17:32:49] 2025-12-15 22:32:04,288 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 17:32:49] 2025-12-15 22:32:04,292 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.25
[2025-12-15 17:32:49] 2025-12-15 22:32:04,294 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929808261/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 17:32:49] 2025-12-15 22:32:04,295 | INFO     | extracted standard info from prmon json
[2025-12-15 17:32:49] 2025-12-15 22:32:04,295 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 17:32:49] 2025-12-15 22:32:04,295 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 17:32:49] 2025-12-15 22:32:04,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 17:32:49] 2025-12-15 22:32:04,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 17:32:49] 2025-12-15 22:32:04,298 | INFO     | fitting pss+swap vs Time
[2025-12-15 17:32:49] 2025-12-15 22:32:04,299 | INFO     | sum of square deviations: 101843770.0
[2025-12-15 17:32:49] 2025-12-15 22:32:04,299 | INFO     | sum of deviations: 675796491.0
[2025-12-15 17:32:49] 2025-12-15 22:32:04,299 | INFO     | mean x: 1765835683.0
[2025-12-15 17:32:49] 2025-12-15 22:32:04,299 | INFO     | mean y: 2703817.913043478
[2025-12-15 17:32:49] 2025-12-15 22:32:04,299 | INFO     | intersect: -11714709611.04769
[2025-12-15 17:32:49] 2025-12-15 22:32:04,300 | INFO     | chi2: 0.0455099397713667
[2025-12-15 17:32:49] 2025-12-15 22:32:04,300 | INFO     | current memory leak: 6.64 B/s (using 69 data points, chi2=0.05)
[2025-12-15 17:32:49] 2025-12-15 22:32:04,300 | INFO     | could have reported an average CPU frequency of 2058 MHz (6 samples)
[2025-12-15 17:32:49] 2025-12-15 22:32:04,300 | INFO     | ..............................
[2025-12-15 17:32:49] 2025-12-15 22:32:04,300 | INFO     | . Timing measurements:
[2025-12-15 17:32:49] 2025-12-15 22:32:04,300 | INFO     | . get job = 0 s
[2025-12-15 17:32:49] 2025-12-15 22:32:04,301 | INFO     | . initial setup = 2 s
[2025-12-15 17:32:49] 2025-12-15 22:32:04,301 | INFO     | . payload setup = 7 s
[2025-12-15 17:32:49] 2025-12-15 22:32:04,301 | INFO     | . stage-in = 0 s
[2025-12-15 17:32:49] 2025-12-15 22:32:04,301 | INFO     | . payload execution = 4611 s
[2025-12-15 17:32:49] 2025-12-15 22:32:04,301 | INFO     | . stage-out = 0 s
[2025-12-15 17:32:49] 2025-12-15 22:32:04,301 | INFO     | . log creation = 0 s
[2025-12-15 17:32:49] 2025-12-15 22:32:04,301 | INFO     | ..............................
[2025-12-15 17:32:49] 2025-12-15 22:32:04,843 | INFO     | 
[2025-12-15 17:32:49] 2025-12-15 22:32:04,843 | INFO     | job summary report
[2025-12-15 17:32:49] 2025-12-15 22:32:04,843 | INFO     | --------------------------------------------------
[2025-12-15 17:32:49] 2025-12-15 22:32:04,844 | INFO     | PanDA job id: 6929808261
[2025-12-15 17:32:49] 2025-12-15 22:32:04,844 | INFO     | task id: 47886831
[2025-12-15 17:32:49] 2025-12-15 22:32:04,844 | INFO     | errors: (none)
[2025-12-15 17:32:49] 2025-12-15 22:32:04,844 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 17:32:49] 2025-12-15 22:32:04,844 | INFO     | pilot state: finished 
[2025-12-15 17:32:49] 2025-12-15 22:32:04,844 | INFO     | transexitcode: 0
[2025-12-15 17:32:49] 2025-12-15 22:32:04,845 | INFO     | exeerrorcode: 0
[2025-12-15 17:32:49] 2025-12-15 22:32:04,845 | INFO     | exeerrordiag: 
[2025-12-15 17:32:49] 2025-12-15 22:32:04,845 | INFO     | exitcode: 0
[2025-12-15 17:32:49] 2025-12-15 22:32:04,845 | INFO     | exitmsg: OK
[2025-12-15 17:32:49] 2025-12-15 22:32:04,845 | INFO     | cpuconsumptiontime: 50435 s
[2025-12-15 17:32:49] 2025-12-15 22:32:04,845 | INFO     | nevents: 400
[2025-12-15 17:32:49] 2025-12-15 22:32:04,846 | INFO     | neventsw: 0
[2025-12-15 17:32:49] 2025-12-15 22:32:04,846 | INFO     | pid: 15700
[2025-12-15 17:32:49] 2025-12-15 22:32:04,846 | INFO     | pgrp: 15700
[2025-12-15 17:32:49] 2025-12-15 22:32:04,846 | INFO     | corecount: 12
[2025-12-15 17:32:49] 2025-12-15 22:32:04,846 | INFO     | event service: False
[2025-12-15 17:32:49] 2025-12-15 22:32:04,846 | INFO     | sizes: {0: 2283762, 1: 2284017, 6: 2284279, 12: 2284307, 4622: 2310429, 4624: 2319427, 4627: 2319611, 4633: 2319805}
[2025-12-15 17:32:49] 2025-12-15 22:32:04,847 | INFO     | --------------------------------------------------
[2025-12-15 17:32:49] 2025-12-15 22:32:04,847 | INFO     | 
[2025-12-15 17:32:49] 2025-12-15 22:32:04,847 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 17:32:49] 2025-12-15 22:32:04,869 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,869 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,869 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,872 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,872 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 17:32:49] 2025-12-15 22:32:04,872 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,872 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 17:32:49] 2025-12-15 22:32:04,873 | INFO     | job 6929808261 has completed (purged errors)
[2025-12-15 17:32:49] 2025-12-15 22:32:04,873 | INFO     | overall cleanup function is called
[2025-12-15 17:32:49] 2025-12-15 22:32:05,881 | INFO     | --- collectZombieJob: --- 10, [15700]
[2025-12-15 17:32:49] 2025-12-15 22:32:05,881 | INFO     | zombie collector waiting for pid 15700
[2025-12-15 17:32:49] 2025-12-15 22:32:05,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 17:32:49] 2025-12-15 22:32:05,882 | INFO     | collected zombie processes
[2025-12-15 17:32:49] 2025-12-15 22:32:05,882 | INFO     | will attempt to kill all subprocesses of pid=15700
[2025-12-15 17:32:49] 2025-12-15 22:32:05,974 | INFO     | process IDs to be killed: [15700] (in reverse order)
[2025-12-15 17:32:49] 2025-12-15 22:32:06,026 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 17:32:49] 2025-12-15 22:32:06,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 17:32:49] 2025-12-15 22:32:06,029 | INFO     | did not find any defunct processes belonging to 15700
[2025-12-15 17:32:49] 2025-12-15 22:32:06,032 | INFO     | did not find any defunct processes belonging to 15700
[2025-12-15 17:32:49] 2025-12-15 22:32:06,032 | INFO     | ready for new job
[2025-12-15 17:32:49] 2025-12-15 22:32:06,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 17:32:49] 2025-12-15 22:32:06,033 | INFO     | ***************************************
[2025-12-15 17:32:49] 2025-12-15 22:32:06,033 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 17:32:49] 2025-12-15 22:32:06,033 | INFO     | ***************************************
[2025-12-15 17:32:49] 2025-12-15 22:32:06,033 | INFO     | 
[2025-12-15 17:32:49] 2025-12-15 22:32:06,034 | INFO     | architecture information:
[2025-12-15 17:32:49] 2025-12-15 22:32:06,034 | INFO     | executing command: cat /etc/os-release
[2025-12-15 17:32:49] 2025-12-15 22:32:06,049 | INFO     | cat /etc/os-release:
[2025-12-15 17:32:49] NAME="CentOS Linux"
[2025-12-15 17:32:49] VERSION="7 (Core)"
[2025-12-15 17:32:49] ID="centos"
[2025-12-15 17:32:49] ID_LIKE="rhel fedora"
[2025-12-15 17:32:49] VERSION_ID="7"
[2025-12-15 17:32:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 17:32:49] ANSI_COLOR="0;31"
[2025-12-15 17:32:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 17:32:49] HOME_URL="https://www.centos.org/"
[2025-12-15 17:32:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 17:32:49] 
[2025-12-15 17:32:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 17:32:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 17:32:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 17:32:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 17:32:49] 
[2025-12-15 17:32:49] 2025-12-15 22:32:06,049 | INFO     | ***************************************
[2025-12-15 17:32:49] 2025-12-15 22:32:06,551 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 17:32:49] 2025-12-15 22:32:06,566 | INFO     | sufficient remaining disk space (29453451264 B)
[2025-12-15 17:32:49] 2025-12-15 22:32:06,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 17:32:49] 2025-12-15 22:32:06,567 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 17:32:49] 2025-12-15 22:32:06,567 | INFO     | update_server=False
[2025-12-15 17:32:49] 2025-12-15 22:32:06,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 17:32:49] 2025-12-15 22:32:06,727 | INFO     | all data control threads have been joined
[2025-12-15 17:32:49] 2025-12-15 22:32:06,778 | INFO     | all job control threads have been joined
[2025-12-15 17:32:49] 2025-12-15 22:32:06,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 17:32:49] 2025-12-15 22:32:06,900 | INFO     | aborting loop
[2025-12-15 17:32:49] 2025-12-15 22:32:06,983 | INFO     | all payload control threads have been joined
[2025-12-15 17:32:49] 2025-12-15 22:32:07,573 | INFO     | [job] retrieve thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:07,728 | INFO     | [payload] failed_post thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:07,732 | INFO     | [data] control thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:07,734 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:07,782 | INFO     | [job] control thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:07,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 17:32:49] 2025-12-15 22:32:07,906 | INFO     | [job] job monitor thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:07,959 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:07,989 | INFO     | [payload] control thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:08,352 | INFO     | [data] copytool_in thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:08,561 | INFO     | [payload] validate_post thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:08,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 17:32:49] 2025-12-15 22:32:08,846 | INFO     | [job] validate thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:09,043 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:09,050 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:09,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 17:32:49] 2025-12-15 22:32:09,795 | INFO     | [data] copytool_out thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:10,397 | INFO     | [job] queue monitor thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:12,819 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 17:32:49] 2025-12-15 22:32:36,363 | INFO     | PID=9333 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-15 17:32:49] 2025-12-15 22:32:36,363 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 17:32:49] 2025-12-15 22:32:36,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 17:32:49] 2025-12-15 22:32:36,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 17:32:49] 2025-12-15 22:32:41,957 | INFO     | [monitor] cgroup control has ended
[2025-12-15 17:32:49] 2025-12-15 22:32:43,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139992754120512)>', '<ExcThread(monitor, started 139991497828096)>']
[2025-12-15 17:32:49] 2025-12-15 22:32:44,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 17:32:49] 2025-12-15 22:32:44,405 | INFO     | [monitor] control thread has ended
[2025-12-15 17:32:49] 2025-12-15 22:32:48,899 | INFO     | all workflow threads have been joined
[2025-12-15 17:32:49] 2025-12-15 22:32:48,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 17:32:49] 2025-12-15 22:32:48,899 | INFO     | traces error code: 0
[2025-12-15 17:32:49] 2025-12-15 22:32:48,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 17:32:49] 2025-12-15 22:32:48,992 [wrapper] ==== pilot stdout END ====
[2025-12-15 17:32:49] 2025-12-15 22:32:48,996 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 17:32:49] 2025-12-15 22:32:49,000 [wrapper] pilotpid: 9333
[2025-12-15 17:32:49] 2025-12-15 22:32:49,004 [wrapper] Pilot exit status: 0
[2025-12-15 17:32:49] 2025-12-15 22:32:49,020 [wrapper] pandaids: 6929808261
[2025-12-15 17:32:49] 2025-12-15 22:32:49,065 [wrapper] cleanup supervisor_pilot 11215 9334
[2025-12-15 17:32:49] 2025-12-15 22:32:49,069 [wrapper] Test setup, not cleaning
[2025-12-15 17:32:49] 2025-12-15 22:32:49,073 [wrapper] apfmon messages muted
[2025-12-15 17:32:49] 2025-12-15 22:32:49,078 [wrapper] ==== wrapper stdout END ====
[2025-12-15 17:32:49] 2025-12-15 22:32:49,081 [wrapper] ==== wrapper stderr END ====
[2025-12-15 17:32:49]  *** Error codes and diagnostics ***
[2025-12-15 17:32:49]     "exeErrorCode": 0,
[2025-12-15 17:32:49]     "exeErrorDiag": "",
[2025-12-15 17:32:49]     "pilotErrorCode": 0,
[2025-12-15 17:32:49]     "pilotErrorDiag": "",
[2025-12-15 17:32:49]  *** Listing of results directory ***
[2025-12-15 17:32:49] total 339356
[2025-12-15 17:32:49] -rwx------ 1 boincer umatlas     36322 Dec 15 10:55 runpilot2-wrapper.sh
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 10:57 queuedata.json
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 10:57 pilot3.tar.gz
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas       100 Dec 15 16:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 17:32:49] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 16:14 run_atlas
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas       105 Dec 15 16:14 job.xml
[2025-12-15 17:32:49] -rw-r--r-- 2 boincer umatlas 192237261 Dec 15 16:14 EVNT.47886829._000325.pool.root.1
[2025-12-15 17:32:49] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 16:14 start_atlas.sh
[2025-12-15 17:32:49] drwxrwx--x 2 boincer umatlas      4096 Dec 15 16:14 shared
[2025-12-15 17:32:49] -rw-r--r-- 2 boincer umatlas    592416 Dec 15 16:14 input.tar.gz
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas         0 Dec 15 16:14 boinc_lockfile
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas      2537 Dec 15 16:14 pandaJob.out
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas        57 Dec 15 16:14 setup.sh.local
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas    994539 Dec 15 16:14 agis_schedconf.cvmfs.json
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas   1516240 Dec 15 16:14 agis_ddmendpoints.agis.ALL.json
[2025-12-15 17:32:49] drwx------ 5 boincer umatlas      4096 Dec 15 16:14 pilot3
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas      5951 Dec 15 17:30 init_data.xml
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas 149253976 Dec 15 17:31 HITS.47886831._008572.pool.root.1
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas       529 Dec 15 17:31 boinc_task_state.xml
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas      1043 Dec 15 17:31 memory_monitor_summary.json
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas    375631 Dec 15 17:31 log.47886831._008572.job.log.tgz.1
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas      7840 Dec 15 17:32 heartbeat.json
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas        95 Dec 15 17:32 pilot_heartbeat.json
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 17:32 boinc_mmap_file
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas        27 Dec 15 17:32 wrapper_checkpoint.txt
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas      4745 Dec 15 17:32 pilotlog.txt
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas    672149 Dec 15 17:32 log.47886831._008572.job.log.1
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas       357 Dec 15 17:32 output.list
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas       620 Dec 15 17:32 runtime_log
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas   1064960 Dec 15 17:32 result.tar.gz
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas      9339 Dec 15 17:32 runtime_log.err
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas       658 Dec 15 17:32 klzNDm55Pp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7HYKDmIbdPam.diag
[2025-12-15 17:32:49] -rw-r--r-- 1 boincer umatlas     21907 Dec 15 17:32 stderr.txt
[2025-12-15 17:32:49] HITS file was successfully produced:
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas 149253976 Dec 15 17:31 shared/HITS.pool.root.1
[2025-12-15 17:32:49]  *** Contents of shared directory: ***
[2025-12-15 17:32:49] total 335128
[2025-12-15 17:32:49] -rw-r--r-- 2 boincer umatlas 192237261 Dec 15 16:14 ATLAS.root_0
[2025-12-15 17:32:49] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 16:14 start_atlas.sh
[2025-12-15 17:32:49] -rw-r--r-- 2 boincer umatlas    592416 Dec 15 16:14 input.tar.gz
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas 149253976 Dec 15 17:31 HITS.pool.root.1
[2025-12-15 17:32:49] -rw------- 1 boincer umatlas   1064960 Dec 15 17:32 result.tar.gz
17:32:50 (5630): run_atlas exited; CPU time 50421.765218
17:32:50 (5630): called boinc_finish(0)

</stderr_txt>
]]>

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