Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:04:43 (797824): wrapper (7.7.26015): starting
16:04:43 (797824): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 16:04:43] Arguments: --nthreads 4
[2025-12-16 16:04:43] Threads: 4
[2025-12-16 16:04:43] Checking for CVMFS
[2025-12-16 16:04:43] No cvmfs_config command found, will try listing directly
[2025-12-16 16:04:43] CVMFS is ok
[2025-12-16 16:04:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 16:04:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 16:04:43] Further information can be found at the LHC@home message board.
[2025-12-16 16:04:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 16:04:43] Checking for apptainer binary...
[2025-12-16 16:04:43] which: no apptainer in ((null))
[2025-12-16 16:04:43] apptainer is not installed, using version from CVMFS
[2025-12-16 16:04:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 16:04:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-12-16 16:04:44] apptainer works
[2025-12-16 16:04:44] Set ATHENA_PROC_NUMBER=4
[2025-12-16 16:04:44] Set ATHENA_CORE_NUMBER=4
[2025-12-16 16:04:44] Starting ATLAS job with PandaID=6929805761
[2025-12-16 16:04:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 20:32:15]  *** The last 200 lines of the pilot log: ***
[2025-12-16 20:32:15] 2025-12-16 19:07:44,750 | INFO     | monitor loop #1062: job 0:6929805761 is in state 'finished'
[2025-12-16 20:32:15] 2025-12-16 19:07:44,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,296 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 20:32:15] 2025-12-16 19:07:45,305 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2582.3319499999993
[2025-12-16 20:32:15] 2025-12-16 19:07:45,313 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6929805761/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,314 | INFO     | extracted standard info from prmon json
[2025-12-16 20:32:15] 2025-12-16 19:07:45,314 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 20:32:15] 2025-12-16 19:07:45,314 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 20:32:15] 2025-12-16 19:07:45,315 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 20:32:15] 2025-12-16 19:07:45,315 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 20:32:15] 2025-12-16 19:07:45,321 | INFO     | fitting pss+swap vs Time
[2025-12-16 20:32:15] 2025-12-16 19:07:45,321 | INFO     | sum of square deviations: 4233158440.0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,323 | INFO     | sum of deviations: 26668831193.999996
[2025-12-16 20:32:15] 2025-12-16 19:07:45,324 | INFO     | mean x: 1765904778.0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,324 | INFO     | mean y: 2297407.355648536
[2025-12-16 20:32:15] 2025-12-16 19:07:45,324 | INFO     | intersect: -11122874753.495491
[2025-12-16 20:32:15] 2025-12-16 19:07:45,324 | INFO     | chi2: 2.013557977230134
[2025-12-16 20:32:15] 2025-12-16 19:07:45,325 | INFO     | sum of square deviations: 3972995422.5
[2025-12-16 20:32:15] 2025-12-16 19:07:45,327 | INFO     | sum of deviations: 39401093861.5
[2025-12-16 20:32:15] 2025-12-16 19:07:45,327 | INFO     | mean x: 1765904625.5
[2025-12-16 20:32:15] 2025-12-16 19:07:45,327 | INFO     | mean y: 2304733.3974358975
[2025-12-16 20:32:15] 2025-12-16 19:07:45,327 | INFO     | intersect: -17510570691.966213
[2025-12-16 20:32:15] 2025-12-16 19:07:45,328 | INFO     | chi2: 1.3449975914329635
[2025-12-16 20:32:15] 2025-12-16 19:07:45,328 | INFO     | current chi2=1.3449975914329635 (change=33.20293695823189 %)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,329 | INFO     | sum of square deviations: 3723716330.0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,331 | INFO     | sum of deviations: 37952731302.99999
[2025-12-16 20:32:15] 2025-12-16 19:07:45,331 | INFO     | mean x: 1765904473.0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,331 | INFO     | mean y: 2303848.113537118
[2025-12-16 20:32:15] 2025-12-16 19:07:45,331 | INFO     | intersect: -17996085940.76031
[2025-12-16 20:32:15] 2025-12-16 19:07:45,332 | INFO     | chi2: 1.3455562140336854
[2025-12-16 20:32:15] 2025-12-16 19:07:45,332 | INFO     | current chi2=1.3455562140336854 (change=-0.04153335324019187 %)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,332 | INFO     | right removable region: 228
[2025-12-16 20:32:15] 2025-12-16 19:07:45,332 | INFO     | sum of square deviations: 3972995422.5
[2025-12-16 20:32:15] 2025-12-16 19:07:45,334 | INFO     | sum of deviations: -5378631659.500001
[2025-12-16 20:32:15] 2025-12-16 19:07:45,335 | INFO     | mean x: 1765904930.5
[2025-12-16 20:32:15] 2025-12-16 19:07:45,335 | INFO     | mean y: 2316008.252136752
[2025-12-16 20:32:15] 2025-12-16 19:07:45,335 | INFO     | intersect: 2392993861.3058295
[2025-12-16 20:32:15] 2025-12-16 19:07:45,335 | INFO     | chi2: 0.6915134326516017
[2025-12-16 20:32:15] 2025-12-16 19:07:45,336 | INFO     | current chi2=0.6915134326516017 (change=65.6571382363247 %)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,336 | INFO     | sum of square deviations: 3723716330.0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,338 | INFO     | sum of deviations: -3211874053.000002
[2025-12-16 20:32:15] 2025-12-16 19:07:45,338 | INFO     | mean x: 1765905083.0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,338 | INFO     | mean y: 2314668.6462882096
[2025-12-16 20:32:15] 2025-12-16 19:07:45,338 | INFO     | intersect: 1525487814.3699086
[2025-12-16 20:32:15] 2025-12-16 19:07:45,339 | INFO     | chi2: 0.6842387252862232
[2025-12-16 20:32:15] 2025-12-16 19:07:45,339 | INFO     | current chi2=0.6842387252862232 (change=1.0519979832472235 %)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,339 | INFO     | left removable region: 20
[2025-12-16 20:32:15] 2025-12-16 19:07:45,340 | INFO     | sum of square deviations: 2790348132.0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,341 | INFO     | sum of deviations: 6490453527.499999
[2025-12-16 20:32:15] 2025-12-16 19:07:45,342 | INFO     | mean x: 1765905052.5
[2025-12-16 20:32:15] 2025-12-16 19:07:45,342 | INFO     | mean y: 2323701.3028846155
[2025-12-16 20:32:15] 2025-12-16 19:07:45,342 | INFO     | intersect: -4105237124.4545717
[2025-12-16 20:32:15] 2025-12-16 19:07:45,342 | INFO     | chi2: 0.0012979908909762957
[2025-12-16 20:32:15] 2025-12-16 19:07:45,343 | INFO     | current memory leak: 2.33 B/s (using 208 data points, chi2=0.00)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,343 | INFO     | could have reported an average CPU frequency of 2549 MHz (12 samples)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,344 | INFO     | ..............................
[2025-12-16 20:32:15] 2025-12-16 19:07:45,344 | INFO     | . Timing measurements:
[2025-12-16 20:32:15] 2025-12-16 19:07:45,344 | INFO     | . get job = 0 s
[2025-12-16 20:32:15] 2025-12-16 19:07:45,344 | INFO     | . initial setup = 1 s
[2025-12-16 20:32:15] 2025-12-16 19:07:45,344 | INFO     | . payload setup = 5 s
[2025-12-16 20:32:15] 2025-12-16 19:07:45,344 | INFO     | . stage-in = 0 s
[2025-12-16 20:32:15] 2025-12-16 19:07:45,344 | INFO     | . payload execution = 14539 s
[2025-12-16 20:32:15] 2025-12-16 19:07:45,345 | INFO     | . stage-out = 1 s
[2025-12-16 20:32:15] 2025-12-16 19:07:45,345 | INFO     | . log creation = 0 s
[2025-12-16 20:32:15] 2025-12-16 19:07:45,345 | INFO     | ..............................
[2025-12-16 20:32:15] 2025-12-16 19:07:45,467 | INFO     | 
[2025-12-16 20:32:15] 2025-12-16 19:07:45,467 | INFO     | job summary report
[2025-12-16 20:32:15] 2025-12-16 19:07:45,468 | INFO     | --------------------------------------------------
[2025-12-16 20:32:15] 2025-12-16 19:07:45,468 | INFO     | PanDA job id: 6929805761
[2025-12-16 20:32:15] 2025-12-16 19:07:45,468 | INFO     | task id: 47886933
[2025-12-16 20:32:15] 2025-12-16 19:07:45,468 | INFO     | errors: (none)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 20:32:15] 2025-12-16 19:07:45,468 | INFO     | pilot state: finished 
[2025-12-16 20:32:15] 2025-12-16 19:07:45,468 | INFO     | transexitcode: 0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,468 | INFO     | exeerrorcode: 0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,469 | INFO     | exeerrordiag: 
[2025-12-16 20:32:15] 2025-12-16 19:07:45,469 | INFO     | exitcode: 0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,469 | INFO     | exitmsg: OK
[2025-12-16 20:32:15] 2025-12-16 19:07:45,469 | INFO     | cpuconsumptiontime: 56138 s
[2025-12-16 20:32:15] 2025-12-16 19:07:45,469 | INFO     | nevents: 400
[2025-12-16 20:32:15] 2025-12-16 19:07:45,469 | INFO     | neventsw: 0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,469 | INFO     | pid: 808849
[2025-12-16 20:32:15] 2025-12-16 19:07:45,469 | INFO     | pgrp: 808849
[2025-12-16 20:32:15] 2025-12-16 19:07:45,470 | INFO     | corecount: 4
[2025-12-16 20:32:15] 2025-12-16 19:07:45,470 | INFO     | event service: False
[2025-12-16 20:32:15] 2025-12-16 19:07:45,470 | INFO     | sizes: {0: 2283806, 1: 2284005, 5: 2284267, 11: 2284323, 14548: 2315232, 14550: 2324252, 14551: 2324436, 14556: 2324630}
[2025-12-16 20:32:15] 2025-12-16 19:07:45,470 | INFO     | --------------------------------------------------
[2025-12-16 20:32:15] 2025-12-16 19:07:45,470 | INFO     | 
[2025-12-16 20:32:15] 2025-12-16 19:07:45,470 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-12-16 20:32:15] 2025-12-16 19:07:45,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,492 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 20:32:15] 2025-12-16 19:07:45,492 | INFO     | job 6929805761 has completed (purged errors)
[2025-12-16 20:32:15] 2025-12-16 19:07:45,492 | INFO     | overall cleanup function is called
[2025-12-16 20:32:15] 2025-12-16 19:07:46,500 | INFO     | --- collectZombieJob: --- 10, [808849]
[2025-12-16 20:32:15] 2025-12-16 19:07:46,500 | INFO     | zombie collector waiting for pid 808849
[2025-12-16 20:32:15] 2025-12-16 19:07:46,501 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 20:32:15] 2025-12-16 19:07:46,501 | INFO     | collected zombie processes
[2025-12-16 20:32:15] 2025-12-16 19:07:46,501 | INFO     | will attempt to kill all subprocesses of pid=808849
[2025-12-16 20:32:15] 2025-12-16 19:07:46,846 | INFO     | process IDs to be killed: [808849] (in reverse order)
[2025-12-16 20:32:15] 2025-12-16 19:07:46,923 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 20:32:15] 2025-12-16 19:07:46,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 20:32:15] 2025-12-16 19:07:46,933 | INFO     | did not find any defunct processes belonging to 808849
[2025-12-16 20:32:15] 2025-12-16 19:07:46,942 | INFO     | did not find any defunct processes belonging to 808849
[2025-12-16 20:32:15] 2025-12-16 19:07:46,943 | INFO     | ready for new job
[2025-12-16 20:32:15] 2025-12-16 19:07:46,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 20:32:15] 2025-12-16 19:07:46,945 | INFO     | ***************************************
[2025-12-16 20:32:15] 2025-12-16 19:07:46,945 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 20:32:15] 2025-12-16 19:07:46,945 | INFO     | ***************************************
[2025-12-16 20:32:15] 2025-12-16 19:07:46,946 | INFO     | 
[2025-12-16 20:32:15] 2025-12-16 19:07:46,948 | INFO     | architecture information:
[2025-12-16 20:32:15] 2025-12-16 19:07:46,948 | INFO     | executing command: cat /etc/os-release
[2025-12-16 20:32:15] 2025-12-16 19:07:46,962 | INFO     | cat /etc/os-release:
[2025-12-16 20:32:15] NAME="CentOS Linux"
[2025-12-16 20:32:15] VERSION="7 (Core)"
[2025-12-16 20:32:15] ID="centos"
[2025-12-16 20:32:15] ID_LIKE="rhel fedora"
[2025-12-16 20:32:15] VERSION_ID="7"
[2025-12-16 20:32:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 20:32:15] ANSI_COLOR="0;31"
[2025-12-16 20:32:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 20:32:15] HOME_URL="https://www.centos.org/"
[2025-12-16 20:32:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 20:32:15] 
[2025-12-16 20:32:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 20:32:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 20:32:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 20:32:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 20:32:15] 
[2025-12-16 20:32:15] 2025-12-16 19:07:46,963 | INFO     | ***************************************
[2025-12-16 20:32:15] 2025-12-16 19:07:47,466 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-12-16 20:32:15] 2025-12-16 19:07:47,483 | INFO     | sufficient remaining disk space (1675080237056 B)
[2025-12-16 20:32:15] 2025-12-16 19:07:47,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 20:32:15] 2025-12-16 19:07:47,483 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 20:32:15] 2025-12-16 19:07:47,483 | INFO     | update_server=False
[2025-12-16 20:32:15] 2025-12-16 19:07:47,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 20:32:15] 2025-12-16 19:07:47,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 20:32:15] 2025-12-16 19:07:48,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 20:32:15] 2025-12-16 19:07:48,259 | INFO     | aborting loop
[2025-12-16 20:32:15] 2025-12-16 19:07:48,486 | INFO     | all data control threads have been joined
[2025-12-16 20:32:15] 2025-12-16 19:07:48,489 | INFO     | [job] retrieve thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:48,650 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:48,688 | INFO     | all job control threads have been joined
[2025-12-16 20:32:15] 2025-12-16 19:07:48,882 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:48,885 | INFO     | all payload control threads have been joined
[2025-12-16 20:32:15] 2025-12-16 19:07:48,979 | INFO     | [payload] failed_post thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:49,020 | INFO     | [data] copytool_in thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:49,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:49,241 | INFO     | [job] validate thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:49,264 | INFO     | [job] job monitor thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:49,490 | INFO     | [data] copytool_out thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:49,492 | INFO     | [data] control thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:49,618 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:49,624 | INFO     | [payload] validate_post thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:49,693 | INFO     | [job] control thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:49,890 | INFO     | [payload] control thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:50,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 20:32:15] 2025-12-16 19:07:50,639 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 20:32:15] 2025-12-16 19:07:51,483 | INFO     | [job] queue monitor thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:07:54,643 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 20:32:15] 2025-12-16 19:08:17,353 | INFO     | PID=801525 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 20:32:15] 2025-12-16 19:08:17,353 | INFO     | .. there are 2 such processes running
[2025-12-16 20:32:15] 2025-12-16 19:08:17,354 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 20:32:15] 2025-12-16 19:08:17,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 20:32:15] 2025-12-16 19:08:17,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 20:32:15] 2025-12-16 19:08:17,755 | INFO     | [monitor] cgroup control has ended
[2025-12-16 20:32:15] 2025-12-16 19:08:18,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22973725067072)>', '<ExcThread(monitor, started 22973488531200)>']
[2025-12-16 20:32:15] 2025-12-16 19:08:18,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 20:32:15] 2025-12-16 19:08:18,357 | INFO     | [monitor] control thread has ended
[2025-12-16 20:32:15] 2025-12-16 19:08:23,273 | INFO     | all workflow threads have been joined
[2025-12-16 20:32:15] 2025-12-16 19:08:23,273 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 20:32:15] 2025-12-16 19:08:23,273 | INFO     | traces error code: 0
[2025-12-16 20:32:15] 2025-12-16 19:08:23,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 20:32:15] 2025-12-16 19:08:23,388 [wrapper] ==== pilot stdout END ====
[2025-12-16 20:32:15] 2025-12-16 19:08:23,391 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 20:32:15] 2025-12-16 19:08:23,393 [wrapper] pilotpid: 801525
[2025-12-16 20:32:15] 2025-12-16 19:08:23,395 [wrapper] Pilot exit status: 0
[2025-12-16 20:32:15] 2025-12-16 19:08:23,404 [wrapper] pandaids: 6929805761
[2025-12-16 20:32:15] 2025-12-16 19:08:23,460 [wrapper] cleanup supervisor_pilot  960348 801526
[2025-12-16 20:32:15] 2025-12-16 19:08:23,463 [wrapper] Test setup, not cleaning
[2025-12-16 20:32:15] 2025-12-16 19:08:23,465 [wrapper] apfmon messages muted
[2025-12-16 20:32:15] 2025-12-16 19:08:23,468 [wrapper] ==== wrapper stdout END ====
[2025-12-16 20:32:15] 2025-12-16 19:08:23,470 [wrapper] ==== wrapper stderr END ====
[2025-12-16 20:32:15]  *** Error codes and diagnostics ***
[2025-12-16 20:32:15]     "exeErrorCode": 0,
[2025-12-16 20:32:15]     "exeErrorDiag": "",
[2025-12-16 20:32:15]     "pilotErrorCode": 0,
[2025-12-16 20:32:15]     "pilotErrorDiag": "",
[2025-12-16 20:32:15]  *** Listing of results directory ***
[2025-12-16 20:32:15] total 339720
[2025-12-16 20:32:15] -rwx------ 1 boinc boinc     36322 Dec 15 16:55 runpilot2-wrapper.sh
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc      5112 Dec 15 16:57 queuedata.json
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc    579449 Dec 15 16:57 pilot3.tar.gz
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc       100 Dec 16 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 20:32:15] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 16:04 run_atlas
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc       105 Dec 16 16:04 job.xml
[2025-12-16 20:32:15] -rw-r--r-- 2 boinc boinc 193251676 Dec 16 16:04 EVNT.47886929._000185.pool.root.1
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc      6425 Dec 16 16:04 init_data.xml
[2025-12-16 20:32:15] -rw-r--r-- 2 boinc boinc     15847 Dec 16 16:04 start_atlas.sh
[2025-12-16 20:32:15] drwxrwx--x 2 boinc boinc      4096 Dec 16 16:04 shared
[2025-12-16 20:32:15] -rw-r--r-- 2 boinc boinc    592402 Dec 16 16:04 input.tar.gz
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc         0 Dec 16 16:04 boinc_lockfile
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc      2514 Dec 16 16:04 pandaJob.out
[2025-12-16 20:32:15] -rw------- 1 boinc boinc    987355 Dec 16 16:04 agis_schedconf.cvmfs.json
[2025-12-16 20:32:15] drwx------ 5 boinc boinc      4096 Dec 16 16:04 pilot3
[2025-12-16 20:32:15] -rw------- 1 boinc boinc 145733713 Dec 16 20:07 HITS.47886933._005326.pool.root.1
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc       528 Dec 16 20:07 boinc_task_state.xml
[2025-12-16 20:32:15] -rw------- 1 boinc boinc        95 Dec 16 20:07 pilot_heartbeat.json
[2025-12-16 20:32:15] -rw------- 1 boinc boinc      1034 Dec 16 20:07 memory_monitor_summary.json
[2025-12-16 20:32:15] -rw------- 1 boinc boinc   1516240 Dec 16 20:07 agis_ddmendpoints.agis.ALL.json
[2025-12-16 20:32:15] -rw------- 1 boinc boinc    416664 Dec 16 20:07 log.47886933._005326.job.log.tgz.1
[2025-12-16 20:32:15] -rw------- 1 boinc boinc      7828 Dec 16 20:07 heartbeat.json
[2025-12-16 20:32:15] -rw------- 1 boinc boinc      4833 Dec 16 20:08 pilotlog.txt
[2025-12-16 20:32:15] -rw------- 1 boinc boinc   2070642 Dec 16 20:08 log.47886933._005326.job.log.1
[2025-12-16 20:32:15] -rw------- 1 boinc boinc       357 Dec 16 20:08 output.list
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc       620 Dec 16 20:08 runtime_log
[2025-12-16 20:32:15] -rw------- 1 boinc boinc   2508800 Dec 16 20:08 result.tar.gz
[2025-12-16 20:32:15] -rw------- 1 boinc boinc       666 Dec 16 20:08 sMtNDm55Pp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAqTKDmwnV7Uo.diag
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc      9206 Dec 16 20:08 runtime_log.err
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc        26 Dec 16 20:31 wrapper_checkpoint.txt
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc      8192 Dec 16 20:32 boinc_mmap_file
[2025-12-16 20:32:15] -rw-r--r-- 1 boinc boinc     20906 Dec 16 20:32 stderr.txt
[2025-12-16 20:32:15] HITS file was successfully produced:
[2025-12-16 20:32:15] -rw------- 1 boinc boinc 145733713 Dec 16 20:07 shared/HITS.pool.root.1
[2025-12-16 20:32:15]  *** Contents of shared directory: ***
[2025-12-16 20:32:15] total 334096
[2025-12-16 20:32:15] -rw-r--r-- 2 boinc boinc 193251676 Dec 16 16:04 ATLAS.root_0
[2025-12-16 20:32:15] -rw-r--r-- 2 boinc boinc     15847 Dec 16 16:04 start_atlas.sh
[2025-12-16 20:32:15] -rw-r--r-- 2 boinc boinc    592402 Dec 16 16:04 input.tar.gz
[2025-12-16 20:32:15] -rw------- 1 boinc boinc 145733713 Dec 16 20:07 HITS.pool.root.1
[2025-12-16 20:32:15] -rw------- 1 boinc boinc   2508800 Dec 16 20:08 result.tar.gz
20:32:17 (797824): run_atlas exited; CPU time 56681.120293
20:32:17 (797824): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN