Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-16 23:44:09 (3452): vboxwrapper version 26210
2025-12-16 23:44:09 (3452): BOINC client version: 8.0.2
2025-12-16 23:44:09 (3452): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-12-16 23:44:10 (3452): Successfully copied 'init_data.xml' to the shared directory.
2025-12-16 23:44:10 (3452): Create VM. (boinc_5205ae8dd6ecbd44, slot#13)
2025-12-16 23:44:10 (3452): Setting Memory Size for VM. (4800MB)
2025-12-16 23:44:11 (3452): Setting CPU Count for VM. (8)
2025-12-16 23:44:11 (3452): Setting Chipset Options for VM.
2025-12-16 23:44:11 (3452): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-16 23:44:11 (3452): Setting Boot Options for VM.
2025-12-16 23:44:12 (3452): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-16 23:44:12 (3452): Enabling VM Network Access.
2025-12-16 23:44:12 (3452): Disabling USB Support for VM.
2025-12-16 23:44:13 (3452): Disabling COM Port Support for VM.
2025-12-16 23:44:13 (3452): Disabling LPT Port Support for VM.
2025-12-16 23:44:13 (3452): Disabling Audio Support for VM.
2025-12-16 23:44:13 (3452): Disabling Clipboard Support for VM.
2025-12-16 23:44:14 (3452): Disabling Drag and Drop Support for VM.
2025-12-16 23:44:14 (3452): Adding storage controller(s) to VM.
2025-12-16 23:44:14 (3452): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-16 23:44:15 (3452): Adding VirtualBox Guest Additions to VM.
2025-12-16 23:44:15 (3452): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-16 23:44:16 (3452): forwarding host port 60234 to guest port 80
2025-12-16 23:44:16 (3452): Enabling remote desktop for VM.
2025-12-16 23:44:16 (3452): Enabling shared directory for VM.
2025-12-16 23:44:17 (3452): Starting VM using VBoxManage interface. (boinc_5205ae8dd6ecbd44, slot#13)
2025-12-16 23:44:22 (3452): Successfully started VM. (PID = '27888')
2025-12-16 23:44:22 (3452): Reporting VM Process ID to BOINC.
2025-12-16 23:44:22 (3452): Guest Log: BIOS: VirtualBox 5.2.44
2025-12-16 23:44:22 (3452): Guest Log: CPUID EDX: 0x178bfbff
2025-12-16 23:44:22 (3452): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-16 23:44:22 (3452): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-16 23:44:22 (3452): Detected: Web Application Enabled (http://localhost:60234)
2025-12-16 23:44:22 (3452): Detected: Remote Desktop Enabled (localhost:60235)
2025-12-16 23:44:22 (3452): Preference change detected
2025-12-16 23:44:22 (3452): Setting CPU throttle for VM. (100%)
2025-12-16 23:44:22 (3452): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-16 23:44:24 (3452): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-16 23:44:24 (3452): Guest Log: BIOS: Booting from Hard Disk...
2025-12-16 23:44:27 (3452): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-16 23:44:27 (3452): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-16 23:44:27 (3452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-16 23:44:33 (3452): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-16 23:44:33 (3452): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-12-16 23:44:42 (3452): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-16 23:44:42 (3452): Guest Log: 00:00:00.000157 main     Log opened 2025-12-16T23:44:40.696747000Z
2025-12-16 23:44:42 (3452): Guest Log: 00:00:00.000266 main     OS Product: Linux
2025-12-16 23:44:42 (3452): Guest Log: 00:00:00.000310 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-16 23:44:42 (3452): Guest Log: 00:00:00.000345 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-16 23:44:42 (3452): Guest Log: 00:00:00.000379 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-16 23:44:42 (3452): Guest Log: 00:00:00.000380 main     Process ID: 1373
2025-12-16 23:44:42 (3452): Guest Log: 00:00:00.000381 main     Package type: LINUX_64BITS_GENERIC
2025-12-16 23:44:42 (3452): Guest Log: 00:00:00.001358 main     5.2.32 r132073 started. Verbose level = 0
2025-12-16 23:44:42 (3452): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-16 23:44:42 (3452): Guest Log: [INFO] Mounting shared directory
2025-12-16 23:44:42 (3452): Guest Log: [INFO] Checking for init_data.xml
2025-12-16 23:44:47 (3452): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-16 23:44:47 (3452): Guest Log: [INFO] Detected branch: prod
2025-12-16 23:44:48 (3452): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-16 23:44:48 (3452): Guest Log: Copying input files
2025-12-16 23:44:52 (3452): Guest Log: Copied input files into RunAtlas.
2025-12-16 23:44:52 (3452): Guest Log: 00:00:10.202330 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 989 135 000ns (GuestNow=1 765 917 891 710 375 000 ns GuestLast=1 765 928 680 699 510 000 ns fSetTimeLastLoop=true )
2025-12-16 23:44:52 (3452): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-16 23:44:52 (3452): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-16 23:44:52 (3452): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-16 23:44:52 (3452): Guest Log: Further information can be found at the LHC@home message board.
2025-12-16 23:45:54 (3452): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-16 23:45:55 (3452): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-16 23:45:55 (3452): Guest Log: 2.6.3.0 1649 1 30152 154087 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-16 23:45:57 (3452): Guest Log: copied the webapp to /var/www
2025-12-16 23:45:57 (3452): Guest Log: ATHENA_PROC_NUMBER=8
2025-12-16 23:45:57 (3452): Guest Log: ATHENA_CORE_NUMBER=8
2025-12-16 23:45:57 (3452): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-16 23:45:57 (3452): Guest Log:  *** Starting ATLAS job. (PandaID=6931295876 taskID=47898878) ***
2025-12-17 01:08:34 (3452): Guest Log:  *** Job finished ***
2025-12-17 01:08:34 (3452): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:12,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:12,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:26,206 | INFO     | [monitor] cgroup control has ended
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:27,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732202530624)>', '<ExcThread(monitor, started 139731232868096)>']
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:28,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:28,252 | INFO     | [monitor] control thread has ended
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:32,875 | INFO     | all workflow threads have been joined
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:32,875 | INFO     | end of generic workflow (traces error code: 0)
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:32,875 | INFO     | traces error code: 0
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:32,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:32,953 [wrapper] ==== pilot stdout END ====
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:32,959 [wrapper] ==== wrapper stdout RESUME ====
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:32,965 [wrapper] pilotpid: 6094
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:32,971 [wrapper] Pilot exit status: 0
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:33,272 [wrapper] pandaids: 6931295876
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:33,313 [wrapper] cleanup supervisor_pilot   993 6095
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:33,319 [wrapper] Test setup, not cleaning
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:33,327 [wrapper] apfmon messages muted
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:33,333 [wrapper] ==== wrapper stdout END ====
2025-12-17 01:08:34 (3452): Guest Log: 2025-12-16 22:08:33,339 [wrapper] ==== wrapper stderr END ====
2025-12-17 01:08:34 (3452): Guest Log:  *** Error codes and diagnostics ***
2025-12-17 01:08:34 (3452): Guest Log:     "exeErrorCode": 0,
2025-12-17 01:08:34 (3452): Guest Log:     "exeErrorDiag": "",
2025-12-17 01:08:34 (3452): Guest Log:     "pilotErrorCode": 0,
2025-12-17 01:08:34 (3452): Guest Log:     "pilotErrorDiag": "",
2025-12-17 01:08:34 (3452): Guest Log:  *** Listing of results directory ***
2025-12-17 01:08:34 (3452): Guest Log: total 181584
2025-12-17 01:08:34 (3452): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 15 03:37 pilot3.tar.gz
2025-12-17 01:08:34 (3452): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 15 03:40 runpilot2-wrapper.sh
2025-12-17 01:08:34 (3452): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 15 03:42 queuedata.json
2025-12-17 01:08:34 (3452): Guest Log: -rwxr-xr-x. 1 atlas atlas      6199 Dec 16 20:44 init_data.xml
2025-12-17 01:08:34 (3452): Guest Log: -rwxr-xr-x. 1 atlas atlas    592393 Dec 16 20:44 input.tar.gz
2025-12-17 01:08:34 (3452): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 16 20:44 start_atlas.sh
2025-12-17 01:08:34 (3452): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 16 20:44 EVNT.47898875._000120.pool.root.1 -> /data/./ATLAS.root_0
2025-12-17 01:08:34 (3452): Guest Log: -rw-r--r--. 1 atlas atlas      2500 Dec 16 20:45 pandaJob.out
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas    987409 Dec 16 20:47 agis_schedconf.cvmfs.json
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 16 20:47 agis_ddmendpoints.agis.ALL.json
2025-12-17 01:08:34 (3452): Guest Log: drwx------. 5 atlas atlas      4096 Dec 16 20:47 pilot3
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas 180151864 Dec 16 22:07 HITS.47898878._003012.pool.root.1
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas      1031 Dec 16 22:07 memory_monitor_summary.json
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas    313457 Dec 16 22:07 log.47898878._003012.job.log.tgz.1
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas      7818 Dec 16 22:07 heartbeat.json
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas        95 Dec 16 22:08 pilot_heartbeat.json
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas      4877 Dec 16 22:08 pilotlog.txt
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas    660533 Dec 16 22:08 log.47898878._003012.job.log.1
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas       357 Dec 16 22:08 output.list
2025-12-17 01:08:34 (3452): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 16 22:08 runtime_log
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas    993280 Dec 16 22:08 result.tar.gz
2025-12-17 01:08:34 (3452): Guest Log: -rw-r--r--. 1 atlas atlas      8731 Dec 16 22:08 runtime_log.err
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas       648 Dec 16 22:08 lgUNDmEdEp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3mSKDmbHkCGo.diag
2025-12-17 01:08:34 (3452): Guest Log: Looking for outputfile HITS.47898878._003012.pool.root.1
2025-12-17 01:08:34 (3452): Guest Log: HITS file was successfully produced
2025-12-17 01:08:34 (3452): Guest Log: -rw-------. 1 atlas atlas 180151864 Dec 16 22:07 /home/atlas/RunAtlas/HITS.47898878._003012.pool.root.1
2025-12-17 01:08:35 (3452): Guest Log: Successfully finished the ATLAS job!
2025-12-17 01:08:35 (3452): Guest Log: Copying the results back to the shared directory!
2025-12-17 01:08:35 (3452): Guest Log:  *** Contents of shared directory: ***
2025-12-17 01:08:35 (3452): Guest Log: total 368868
2025-12-17 01:08:35 (3452): Guest Log: -rwxrwxrwx. 1 root root 195949378 Dec 16 20:44 ATLAS.root_0
2025-12-17 01:08:35 (3452): Guest Log: -rwxrwxrwx. 1 root root 180151864 Dec 16 22:08 HITS.pool.root.1
2025-12-17 01:08:35 (3452): Guest Log: -rwxrwxrwx. 1 root root      6199 Dec 16 20:44 init_data.xml
2025-12-17 01:08:35 (3452): Guest Log: -rwxrwxrwx. 1 root root    592393 Dec 15 19:58 input.tar.gz
2025-12-17 01:08:35 (3452): Guest Log: -rwxrwxrwx. 1 root root    993280 Dec 16 22:08 result.tar.gz
2025-12-17 01:08:35 (3452): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 15 19:58 start_atlas.sh
2025-12-17 01:08:35 (3452): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-17 01:08:35 (3452): VM Completion File Detected.
2025-12-17 01:08:35 (3452): Powering off VM.
2025-12-17 01:08:36 (3452): Successfully stopped VM.
2025-12-17 01:08:36 (3452): Deregistering VM. (boinc_5205ae8dd6ecbd44, slot#13)
2025-12-17 01:08:36 (3452): Removing network bandwidth throttle group from VM.
2025-12-17 01:08:36 (3452): Removing VM from VirtualBox.
2025-12-17 01:08:41 (3452): called boinc_finish(0)

</stderr_txt>
]]>

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