Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:50:20 (6381): wrapper (7.7.26015): starting
13:50:20 (6381): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 13:50:20] Arguments: --nthreads 12
[2025-12-15 13:50:20] Threads: 12
[2025-12-15 13:50:20] Checking for CVMFS
[2025-12-15 13:50:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 13:50:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 13:50:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 13:50:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 13:50:20] 2.11.2.0 22587 29966 91956 154042 1 57 13912265 20275200 1 130560 0 11041889 99.906 1897970 41332 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 13:50:20] CVMFS is ok
[2025-12-15 13:50:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 13:50:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 13:50:20] Further information can be found at the LHC@home message board.
[2025-12-15 13:50:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 13:50:20] Checking for apptainer binary...
[2025-12-15 13:50:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 13:50:20] Running /usr/bin/apptainer --version
[2025-12-15 13:50:20] apptainer version 1.3.2-1.el7
[2025-12-15 13:50:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 13:50:22] c-205-13.aglt2.org
[2025-12-15 13:50:22] apptainer works
[2025-12-15 13:50:22] Set ATHENA_PROC_NUMBER=12
[2025-12-15 13:50:22] Set ATHENA_CORE_NUMBER=12
[2025-12-15 13:50:22] Starting ATLAS job with PandaID=6929722466
[2025-12-15 13:50:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 15:33:52]  *** The last 200 lines of the pilot log: ***
[2025-12-15 15:33:52] 2025-12-15 20:32:45,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 15:33:52] 2025-12-15 20:32:45,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 15:33:52] 2025-12-15 20:32:45,890 | INFO     | fitting pss+swap vs Time
[2025-12-15 15:33:52] 2025-12-15 20:32:45,890 | INFO     | sum of square deviations: 310052325.0
[2025-12-15 15:33:52] 2025-12-15 20:32:45,890 | INFO     | sum of deviations: 12531617045.000004
[2025-12-15 15:33:52] 2025-12-15 20:32:45,891 | INFO     | mean x: 1765827684.5
[2025-12-15 15:33:52] 2025-12-15 20:32:45,891 | INFO     | mean y: 2652136.02
[2025-12-15 15:33:52] 2025-12-15 20:32:45,891 | INFO     | intersect: -71368127972.18622
[2025-12-15 15:33:52] 2025-12-15 20:32:45,891 | INFO     | chi2: 1.5258595012613136
[2025-12-15 15:33:52] 2025-12-15 20:32:45,891 | INFO     | sum of square deviations: 265828240.0
[2025-12-15 15:33:52] 2025-12-15 20:32:45,892 | INFO     | sum of deviations: 11707441104.000004
[2025-12-15 15:33:52] 2025-12-15 20:32:45,892 | INFO     | mean x: 1765827532.0
[2025-12-15 15:33:52] 2025-12-15 20:32:45,892 | INFO     | mean y: 2649291.652631579
[2025-12-15 15:33:52] 2025-12-15 20:32:45,892 | INFO     | intersect: -77766822569.99638
[2025-12-15 15:33:52] 2025-12-15 20:32:45,893 | INFO     | chi2: 1.529542879549585
[2025-12-15 15:33:52] 2025-12-15 20:32:45,893 | INFO     | current chi2=1.529542879549585 (change=-0.24139694940631706 %)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,893 | INFO     | right removable region: 94
[2025-12-15 15:33:52] 2025-12-15 20:32:45,893 | INFO     | sufficient remaining disk space (29310844928 B)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,894 | INFO     | sum of square deviations: 265828240.0
[2025-12-15 15:33:52] 2025-12-15 20:32:45,894 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,894 | INFO     | sum of deviations: -3141316878.0
[2025-12-15 15:33:52] 2025-12-15 20:32:45,895 | INFO     | mean x: 1765827837.0
[2025-12-15 15:33:52] 2025-12-15 20:32:45,895 | INFO     | mean y: 2705005.694736842
[2025-12-15 15:33:52] 2025-12-15 20:32:45,895 | INFO     | intersect: 20869655740.538906
[2025-12-15 15:33:52] 2025-12-15 20:32:45,895 | INFO     | chi2: 0.12262465432582652
[2025-12-15 15:33:52] 2025-12-15 20:32:45,896 | INFO     | current chi2=0.12262465432582652 (change=91.96356845276632 %)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,896 | INFO     | sum of square deviations: 226022842.5
[2025-12-15 15:33:52] 2025-12-15 20:32:45,896 | INFO     | sum of deviations: -4757196507.999998
[2025-12-15 15:33:52] 2025-12-15 20:32:45,897 | INFO     | mean x: 1765827989.5
[2025-12-15 15:33:52] 2025-12-15 20:32:45,897 | INFO     | mean y: 2710895.0444444446
[2025-12-15 15:33:52] 2025-12-15 20:32:45,897 | INFO     | intersect: 37168824958.838936
[2025-12-15 15:33:52] 2025-12-15 20:32:45,897 | INFO     | chi2: 0.07554800923455796
[2025-12-15 15:33:52] 2025-12-15 20:32:45,897 | INFO     | current chi2=0.07554800923455796 (change=38.390848357607595 %)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,898 | INFO     | sum of square deviations: 190403570.0
[2025-12-15 15:33:52] 2025-12-15 20:32:45,898 | INFO     | sum of deviations: -1897143066.0000005
[2025-12-15 15:33:52] 2025-12-15 20:32:45,898 | INFO     | mean x: 1765828142.0
[2025-12-15 15:33:52] 2025-12-15 20:32:45,899 | INFO     | mean y: 2698609.4
[2025-12-15 15:33:52] 2025-12-15 20:32:45,899 | INFO     | intersect: 17597056820.976414
[2025-12-15 15:33:52] 2025-12-15 20:32:45,899 | INFO     | chi2: 0.05669346628898053
[2025-12-15 15:33:52] 2025-12-15 20:32:45,899 | INFO     | current chi2=0.05669346628898053 (change=24.957034787030207 %)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,899 | INFO     | left removable region: 30
[2025-12-15 15:33:52] 2025-12-15 20:32:45,900 | INFO     | sum of square deviations: 81266640.0
[2025-12-15 15:33:52] 2025-12-15 20:32:45,900 | INFO     | sum of deviations: 1093020570.0
[2025-12-15 15:33:52] 2025-12-15 20:32:45,900 | INFO     | mean x: 1765828416.5
[2025-12-15 15:33:52] 2025-12-15 20:32:45,900 | INFO     | mean y: 2681058.5
[2025-12-15 15:33:52] 2025-12-15 20:32:45,901 | INFO     | intersect: -23747369175.21247
[2025-12-15 15:33:52] 2025-12-15 20:32:45,901 | INFO     | chi2: 8.444110156615509e-05
[2025-12-15 15:33:52] 2025-12-15 20:32:45,901 | INFO     | current memory leak: 13.45 B/s (using 64 data points, chi2=0.00)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,901 | INFO     | could have reported an average CPU frequency of 2118 MHz (7 samples)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,902 | INFO     | ..............................
[2025-12-15 15:33:52] 2025-12-15 20:32:45,902 | INFO     | . Timing measurements:
[2025-12-15 15:33:52] 2025-12-15 20:32:45,902 | INFO     | . get job = 0 s
[2025-12-15 15:33:52] 2025-12-15 20:32:45,902 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6929722466: 4468556 B (within 2768240640 B limit)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,902 | INFO     | . initial setup = 2 s
[2025-12-15 15:33:52] 2025-12-15 20:32:45,903 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6929722466/HITS.47898763._016516.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,903 | INFO     | . payload setup = 7 s
[2025-12-15 15:33:52] 2025-12-15 20:32:45,903 | INFO     | total size of present files: 0 B (workdir size: 4468556 B)
[2025-12-15 15:33:52] 2025-12-15 20:32:45,903 | INFO     | . stage-in = 0 s
[2025-12-15 15:33:52] 2025-12-15 20:32:45,904 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6929722466/HITS.47898763._016516.pool.root.1 since it does not exist
[2025-12-15 15:33:52] 2025-12-15 20:32:45,904 | INFO     | . payload execution = 6096 s
[2025-12-15 15:33:52] 2025-12-15 20:32:45,904 | INFO     | . stage-out = 0 s
[2025-12-15 15:33:52] 2025-12-15 20:32:45,905 | INFO     | . log creation = 0 s
[2025-12-15 15:33:52] 2025-12-15 20:32:45,905 | INFO     | ..............................
[2025-12-15 15:33:52] 2025-12-15 20:32:46,079 | INFO     | number of running child processes to parent process 16422: 1
[2025-12-15 15:33:52] 2025-12-15 20:32:46,079 | INFO     | maximum number of monitored processes: 6
[2025-12-15 15:33:52] 2025-12-15 20:32:46,084 | INFO     | aborting job monitoring since job object (job id=6929722466) has expired
[2025-12-15 15:33:52] 2025-12-15 20:32:46,247 | INFO     | 
[2025-12-15 15:33:52] 2025-12-15 20:32:46,248 | INFO     | job summary report
[2025-12-15 15:33:52] 2025-12-15 20:32:46,248 | INFO     | --------------------------------------------------
[2025-12-15 15:33:52] 2025-12-15 20:32:46,248 | INFO     | PanDA job id: 6929722466
[2025-12-15 15:33:52] 2025-12-15 20:32:46,248 | INFO     | task id: 47898763
[2025-12-15 15:33:52] 2025-12-15 20:32:46,248 | INFO     | errors: (none)
[2025-12-15 15:33:52] 2025-12-15 20:32:46,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 15:33:52] 2025-12-15 20:32:46,249 | INFO     | pilot state: finished 
[2025-12-15 15:33:52] 2025-12-15 20:32:46,249 | INFO     | transexitcode: 0
[2025-12-15 15:33:52] 2025-12-15 20:32:46,249 | INFO     | exeerrorcode: 0
[2025-12-15 15:33:52] 2025-12-15 20:32:46,249 | INFO     | exeerrordiag: 
[2025-12-15 15:33:52] 2025-12-15 20:32:46,249 | INFO     | exitcode: 0
[2025-12-15 15:33:52] 2025-12-15 20:32:46,249 | INFO     | exitmsg: OK
[2025-12-15 15:33:52] 2025-12-15 20:32:46,249 | INFO     | cpuconsumptiontime: 65724 s
[2025-12-15 15:33:52] 2025-12-15 20:32:46,249 | INFO     | nevents: 400
[2025-12-15 15:33:52] 2025-12-15 20:32:46,249 | INFO     | neventsw: 0
[2025-12-15 15:33:52] 2025-12-15 20:32:46,250 | INFO     | pid: 16422
[2025-12-15 15:33:52] 2025-12-15 20:32:46,250 | INFO     | pgrp: 16422
[2025-12-15 15:33:52] 2025-12-15 20:32:46,250 | INFO     | corecount: 12
[2025-12-15 15:33:52] 2025-12-15 20:32:46,250 | INFO     | event service: False
[2025-12-15 15:33:52] 2025-12-15 20:32:46,250 | INFO     | sizes: {0: 2283958, 1: 2283958, 5: 2284248, 11: 2284304, 6106: 2311055, 6107: 2320237, 6113: 2320403}
[2025-12-15 15:33:52] 2025-12-15 20:32:46,250 | INFO     | --------------------------------------------------
[2025-12-15 15:33:52] 2025-12-15 20:32:46,250 | INFO     | 
[2025-12-15 15:33:52] 2025-12-15 20:32:46,250 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 15:33:52] 2025-12-15 20:32:46,273 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,273 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,273 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,274 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,275 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,276 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 15:33:52] 2025-12-15 20:32:46,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,276 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 15:33:52] 2025-12-15 20:32:46,277 | INFO     | job 6929722466 has completed (purged errors)
[2025-12-15 15:33:52] 2025-12-15 20:32:46,277 | INFO     | overall cleanup function is called
[2025-12-15 15:33:52] 2025-12-15 20:32:47,285 | INFO     | --- collectZombieJob: --- 10, [16422]
[2025-12-15 15:33:52] 2025-12-15 20:32:47,285 | INFO     | zombie collector waiting for pid 16422
[2025-12-15 15:33:52] 2025-12-15 20:32:47,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 15:33:52] 2025-12-15 20:32:47,286 | INFO     | collected zombie processes
[2025-12-15 15:33:52] 2025-12-15 20:32:47,286 | INFO     | will attempt to kill all subprocesses of pid=16422
[2025-12-15 15:33:52] 2025-12-15 20:32:47,377 | INFO     | process IDs to be killed: [16422] (in reverse order)
[2025-12-15 15:33:52] 2025-12-15 20:32:47,426 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 15:33:52] 2025-12-15 20:32:47,426 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 15:33:52] 2025-12-15 20:32:47,430 | INFO     | did not find any defunct processes belonging to 16422
[2025-12-15 15:33:52] 2025-12-15 20:32:47,432 | INFO     | did not find any defunct processes belonging to 16422
[2025-12-15 15:33:52] 2025-12-15 20:32:47,432 | INFO     | ready for new job
[2025-12-15 15:33:52] 2025-12-15 20:32:47,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 15:33:52] 2025-12-15 20:32:47,433 | INFO     | ***************************************
[2025-12-15 15:33:52] 2025-12-15 20:32:47,434 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 15:33:52] 2025-12-15 20:32:47,434 | INFO     | ***************************************
[2025-12-15 15:33:52] 2025-12-15 20:32:47,434 | INFO     | 
[2025-12-15 15:33:52] 2025-12-15 20:32:47,434 | INFO     | architecture information:
[2025-12-15 15:33:52] 2025-12-15 20:32:47,435 | INFO     | executing command: cat /etc/os-release
[2025-12-15 15:33:52] 2025-12-15 20:32:47,449 | INFO     | cat /etc/os-release:
[2025-12-15 15:33:52] NAME="CentOS Linux"
[2025-12-15 15:33:52] VERSION="7 (Core)"
[2025-12-15 15:33:52] ID="centos"
[2025-12-15 15:33:52] ID_LIKE="rhel fedora"
[2025-12-15 15:33:52] VERSION_ID="7"
[2025-12-15 15:33:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 15:33:52] ANSI_COLOR="0;31"
[2025-12-15 15:33:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 15:33:52] HOME_URL="https://www.centos.org/"
[2025-12-15 15:33:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 15:33:52] 
[2025-12-15 15:33:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 15:33:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 15:33:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 15:33:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 15:33:52] 
[2025-12-15 15:33:52] 2025-12-15 20:32:47,449 | INFO     | ***************************************
[2025-12-15 15:33:52] 2025-12-15 20:32:47,951 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 15:33:52] 2025-12-15 20:32:47,970 | INFO     | sufficient remaining disk space (29316087808 B)
[2025-12-15 15:33:52] 2025-12-15 20:32:47,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 15:33:52] 2025-12-15 20:32:47,970 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 15:33:52] 2025-12-15 20:32:47,970 | INFO     | update_server=False
[2025-12-15 15:33:52] 2025-12-15 20:32:47,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 15:33:52] 2025-12-15 20:32:47,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 15:33:52] 2025-12-15 20:32:47,971 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 15:33:52] 2025-12-15 20:32:47,972 | INFO     | aborting loop
[2025-12-15 15:33:52] 2025-12-15 20:32:47,998 | INFO     | all data control threads have been joined
[2025-12-15 15:33:52] 2025-12-15 20:32:48,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 15:33:52] 2025-12-15 20:32:48,601 | INFO     | all job control threads have been joined
[2025-12-15 15:33:52] 2025-12-15 20:32:48,974 | INFO     | [job] retrieve thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:48,977 | INFO     | [job] queue monitor thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:48,977 | INFO     | [job] job monitor thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:49,003 | INFO     | [data] control thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:49,095 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:49,207 | INFO     | [data] copytool_in thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:49,225 | INFO     | all payload control threads have been joined
[2025-12-15 15:33:52] 2025-12-15 20:32:49,470 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:49,606 | INFO     | [job] control thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:49,767 | INFO     | [payload] validate_post thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:49,984 | INFO     | [job] validate thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:50,041 | INFO     | [data] copytool_out thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:50,148 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:50,231 | INFO     | [payload] control thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:50,252 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:50,396 | INFO     | [payload] failed_post thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:32:50,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 15:33:52] 2025-12-15 20:32:54,616 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 15:33:52] 2025-12-15 20:33:19,032 | INFO     | PID=10056 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 15:33:52] 2025-12-15 20:33:19,033 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 15:33:52] 2025-12-15 20:33:19,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 15:33:52] 2025-12-15 20:33:19,033 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 15:33:52] 2025-12-15 20:33:45,988 | INFO     | [monitor] cgroup control has ended
[2025-12-15 15:33:52] 2025-12-15 20:33:46,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705387722560)>', '<ExcThread(monitor, started 139704817153792)>']
[2025-12-15 15:33:52] 2025-12-15 20:33:47,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 15:33:52] 2025-12-15 20:33:47,176 | INFO     | [monitor] control thread has ended
[2025-12-15 15:33:52] 2025-12-15 20:33:51,722 | INFO     | all workflow threads have been joined
[2025-12-15 15:33:52] 2025-12-15 20:33:51,723 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 15:33:52] 2025-12-15 20:33:51,723 | INFO     | traces error code: 0
[2025-12-15 15:33:52] 2025-12-15 20:33:51,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 15:33:52] 2025-12-15 20:33:51,823 [wrapper] ==== pilot stdout END ====
[2025-12-15 15:33:52] 2025-12-15 20:33:51,826 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 15:33:52] 2025-12-15 20:33:51,830 [wrapper] pilotpid: 10056
[2025-12-15 15:33:52] 2025-12-15 20:33:51,833 [wrapper] Pilot exit status: 0
[2025-12-15 15:33:52] 2025-12-15 20:33:51,848 [wrapper] pandaids: 6929722466
[2025-12-15 15:33:52] 2025-12-15 20:33:51,894 [wrapper] cleanup supervisor_pilot 15816 10057
[2025-12-15 15:33:52] 2025-12-15 20:33:51,898 [wrapper] Test setup, not cleaning
[2025-12-15 15:33:52] 2025-12-15 20:33:51,902 [wrapper] apfmon messages muted
[2025-12-15 15:33:52] 2025-12-15 20:33:51,906 [wrapper] ==== wrapper stdout END ====
[2025-12-15 15:33:52] 2025-12-15 20:33:51,910 [wrapper] ==== wrapper stderr END ====
[2025-12-15 15:33:52]  *** Error codes and diagnostics ***
[2025-12-15 15:33:52]     "exeErrorCode": 0,
[2025-12-15 15:33:52]     "exeErrorDiag": "",
[2025-12-15 15:33:52]     "pilotErrorCode": 0,
[2025-12-15 15:33:52]     "pilotErrorDiag": "",
[2025-12-15 15:33:52]  *** Listing of results directory ***
[2025-12-15 15:33:52] total 438532
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 08:27 pilot3.tar.gz
[2025-12-15 15:33:52] -rwx------ 1 boincer umatlas     36322 Dec 15 08:30 runpilot2-wrapper.sh
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 08:33 queuedata.json
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas       100 Dec 15 13:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 15:33:52] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 13:50 run_atlas
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas       105 Dec 15 13:50 job.xml
[2025-12-15 15:33:52] -rw-r--r-- 2 boincer umatlas 226843434 Dec 15 13:50 EVNT.47898761._000660.pool.root.1
[2025-12-15 15:33:52] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 13:50 start_atlas.sh
[2025-12-15 15:33:52] drwxrwx--x 2 boincer umatlas      4096 Dec 15 13:50 shared
[2025-12-15 15:33:52] -rw-r--r-- 2 boincer umatlas    592399 Dec 15 13:50 input.tar.gz
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas         0 Dec 15 13:50 boinc_lockfile
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas      2508 Dec 15 13:50 pandaJob.out
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas        57 Dec 15 13:50 setup.sh.local
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas    994497 Dec 15 13:50 agis_schedconf.cvmfs.json
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas   1516240 Dec 15 13:50 agis_ddmendpoints.agis.ALL.json
[2025-12-15 15:33:52] drwx------ 5 boincer umatlas      4096 Dec 15 13:50 pilot3
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas      5953 Dec 15 15:27 init_data.xml
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas 215740414 Dec 15 15:32 HITS.47898763._016516.pool.root.1
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas       529 Dec 15 15:32 boinc_task_state.xml
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas      1045 Dec 15 15:32 memory_monitor_summary.json
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas    404714 Dec 15 15:32 log.47898763._016516.job.log.tgz.1
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas      7846 Dec 15 15:32 heartbeat.json
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 15:33 boinc_mmap_file
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas        27 Dec 15 15:33 wrapper_checkpoint.txt
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas        95 Dec 15 15:33 pilot_heartbeat.json
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas      4746 Dec 15 15:33 pilotlog.txt
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas    873054 Dec 15 15:33 log.47898763._016516.job.log.1
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas       357 Dec 15 15:33 output.list
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas       620 Dec 15 15:33 runtime_log
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas   1300480 Dec 15 15:33 result.tar.gz
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas       659 Dec 15 15:33 yG3NDmkpNp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaeTKDmf1PSVm.diag
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas      9344 Dec 15 15:33 runtime_log.err
[2025-12-15 15:33:52] -rw-r--r-- 1 boincer umatlas     21302 Dec 15 15:33 stderr.txt
[2025-12-15 15:33:52] HITS file was successfully produced:
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas 215740414 Dec 15 15:32 shared/HITS.pool.root.1
[2025-12-15 15:33:52]  *** Contents of shared directory: ***
[2025-12-15 15:33:52] total 434080
[2025-12-15 15:33:52] -rw-r--r-- 2 boincer umatlas 226843434 Dec 15 13:50 ATLAS.root_0
[2025-12-15 15:33:52] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 13:50 start_atlas.sh
[2025-12-15 15:33:52] -rw-r--r-- 2 boincer umatlas    592399 Dec 15 13:50 input.tar.gz
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas 215740414 Dec 15 15:32 HITS.pool.root.1
[2025-12-15 15:33:52] -rw------- 1 boincer umatlas   1300480 Dec 15 15:33 result.tar.gz
15:33:53 (6381): run_atlas exited; CPU time 65706.611384
15:33:53 (6381): called boinc_finish(0)

</stderr_txt>
]]>

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