Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:02:46 (1285665): wrapper (7.7.26015): starting
05:02:46 (1285665): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 05:02:46] Arguments: --nthreads 4
[2025-12-16 05:02:46] Threads: 4
[2025-12-16 05:02:46] Checking for CVMFS
[2025-12-16 05:02:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 05:02:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 05:02:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 05:02:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 05:02:47] 2.9.2.0 31218 4442 99216 154056 0 56 19042694 36864000 0 130560 0 3301965 99.991 159769 9073 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 05:02:47] CVMFS is ok
[2025-12-16 05:02:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 05:02:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 05:02:47] Further information can be found at the LHC@home message board.
[2025-12-16 05:02:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 05:02:47] Checking for apptainer binary...
[2025-12-16 05:02:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 05:02:47] Running /usr/bin/apptainer --version
[2025-12-16 05:02:47] apptainer version 1.4.1-1.1
[2025-12-16 05:02:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 05:02:47] thA332a
[2025-12-16 05:02:47] apptainer works
[2025-12-16 05:02:47] Set ATHENA_PROC_NUMBER=4
[2025-12-16 05:02:47] Set ATHENA_CORE_NUMBER=4
[2025-12-16 05:02:47] Starting ATLAS job with PandaID=6929804698
[2025-12-16 05:02:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 06:43:21]  *** The last 200 lines of the pilot log: ***
[2025-12-16 06:43:21] 2025-12-16 05:42:50,107 | INFO     | executing command: cat /etc/os-release
[2025-12-16 06:43:21] 2025-12-16 05:42:50,120 | INFO     | cat /etc/os-release:
[2025-12-16 06:43:21] NAME="CentOS Linux"
[2025-12-16 06:43:21] VERSION="7 (Core)"
[2025-12-16 06:43:21] ID="centos"
[2025-12-16 06:43:21] ID_LIKE="rhel fedora"
[2025-12-16 06:43:21] VERSION_ID="7"
[2025-12-16 06:43:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 06:43:21] ANSI_COLOR="0;31"
[2025-12-16 06:43:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 06:43:21] HOME_URL="https://www.centos.org/"
[2025-12-16 06:43:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 06:43:21] 
[2025-12-16 06:43:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 06:43:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 06:43:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 06:43:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 06:43:21] 
[2025-12-16 06:43:21] 2025-12-16 05:42:50,120 | INFO     | ***************************************
[2025-12-16 06:43:21] 2025-12-16 05:42:50,624 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-16 06:43:21] 2025-12-16 05:42:50,640 | INFO     | sufficient remaining disk space (341482405888 B)
[2025-12-16 06:43:21] 2025-12-16 05:42:50,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 06:43:21] 2025-12-16 05:42:50,641 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 06:43:21] 2025-12-16 05:42:50,641 | INFO     | update_server=False
[2025-12-16 06:43:21] 2025-12-16 05:42:50,641 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 06:43:21] 2025-12-16 05:42:50,641 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:43:21] 2025-12-16 05:42:50,823 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 06:43:21] 2025-12-16 05:42:51,281 | INFO     | all payload control threads have been joined
[2025-12-16 06:43:21] 2025-12-16 05:42:51,350 | INFO     | all data control threads have been joined
[2025-12-16 06:43:21] 2025-12-16 05:42:51,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:43:21] 2025-12-16 05:42:51,450 | INFO     | aborting loop
[2025-12-16 06:43:21] 2025-12-16 05:42:51,646 | INFO     | [job] retrieve thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:51,647 | INFO     | [job] queue monitor thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:51,688 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:51,727 | INFO     | [payload] validate_post thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:51,773 | INFO     | all job control threads have been joined
[2025-12-16 06:43:21] 2025-12-16 05:42:51,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 06:43:21] 2025-12-16 05:42:51,948 | INFO     | [data] copytool_in thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:52,287 | INFO     | [payload] control thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:52,356 | INFO     | [data] control thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:52,434 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:52,456 | INFO     | [job] job monitor thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:52,779 | INFO     | [job] control thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:52,829 | INFO     | [data] copytool_out thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:52,844 | INFO     | [payload] failed_post thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:53,011 | INFO     | [job] validate thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:53,089 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:42:55,827 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:43:01,655 | INFO     | job.realtimelogging is not enabled
[2025-12-16 06:43:21] 2025-12-16 05:43:01,839 | INFO     | [monitor] cgroup control has ended
[2025-12-16 06:43:21] 2025-12-16 05:43:02,661 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 06:43:21] 2025-12-16 05:43:04,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187855730496)>', '<ExcThread(monitor, started 140187380209408)>']
[2025-12-16 06:43:21] 2025-12-16 05:43:09,660 | INFO     | all workflow threads have been joined
[2025-12-16 06:43:21] 2025-12-16 05:43:09,660 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 06:43:21] 2025-12-16 05:43:09,661 | INFO     | traces error code: 0
[2025-12-16 06:43:21] 2025-12-16 05:43:09,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 06:43:21] 2025-12-16 05:43:21,557 | INFO     | PID=1289464 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 06:43:21] 2025-12-16 05:43:21,557 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 06:43:21] 2025-12-16 05:43:21,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 06:43:21] 2025-12-16 05:43:21,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 06:43:21] 2025-12-16 05:43:21,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 06:43:21] 2025-12-16 05:43:21,557 | INFO     | [monitor] control thread has ended
[2025-12-16 06:43:21] 2025-12-16 05:43:21,632 [wrapper] ==== pilot stdout END ====
[2025-12-16 06:43:21] 2025-12-16 05:43:21,636 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 06:43:21] 2025-12-16 05:43:21,639 [wrapper] pilotpid: 1289464
[2025-12-16 06:43:21] 2025-12-16 05:43:21,643 [wrapper] Pilot exit status: 0
[2025-12-16 06:43:21] 2025-12-16 05:43:21,654 [wrapper] pandaids: 6929804698
[2025-12-16 06:43:21] 2025-12-16 05:43:21,675 [wrapper] cleanup supervisor_pilot 1308293 1289465
[2025-12-16 06:43:21] 2025-12-16 05:43:21,678 [wrapper] Test setup, not cleaning
[2025-12-16 06:43:21] 2025-12-16 05:43:21,682 [wrapper] apfmon messages muted
[2025-12-16 06:43:21] 2025-12-16 05:43:21,686 [wrapper] ==== wrapper stdout END ====
[2025-12-16 06:43:21] 2025-12-16 05:43:21,689 [wrapper] ==== wrapper stderr END ====
[2025-12-16 06:43:21]  *** Error codes and diagnostics ***
[2025-12-16 06:43:21]     "exeErrorCode": 0,
[2025-12-16 06:43:21]     "exeErrorDiag": "",
[2025-12-16 06:43:21]     "pilotErrorCode": 0,
[2025-12-16 06:43:21]     "pilotErrorDiag": "",
[2025-12-16 06:43:21]  *** Listing of results directory ***
[2025-12-16 06:43:21] total 413660
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc    579449 Dec 15 14:27 pilot3.tar.gz
[2025-12-16 06:43:21] -rwx------ 1 boinc boinc     36322 Dec 15 14:27 runpilot2-wrapper.sh
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc      5112 Dec 15 14:29 queuedata.json
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc       100 Dec 16 05:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 06:43:21] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 05:02 run_atlas
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc       105 Dec 16 05:02 job.xml
[2025-12-16 06:43:21] -rw-r--r-- 2 boinc boinc 206872862 Dec 16 05:02 EVNT.47905905._000023.pool.root.1
[2025-12-16 06:43:21] drwxrwx--x 2 boinc boinc      4096 Dec 16 05:02 shared
[2025-12-16 06:43:21] -rw-r--r-- 2 boinc boinc    592379 Dec 16 05:02 input.tar.gz
[2025-12-16 06:43:21] -rw-r--r-- 2 boinc boinc     15847 Dec 16 05:02 start_atlas.sh
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc         0 Dec 16 05:02 boinc_setup_complete
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc      6370 Dec 16 05:02 init_data.xml
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc         0 Dec 16 05:02 boinc_lockfile
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc      2475 Dec 16 05:02 pandaJob.out
[2025-12-16 06:43:21] -rw------- 1 boinc boinc    994531 Dec 16 05:02 agis_schedconf.cvmfs.json
[2025-12-16 06:43:21] -rw------- 1 boinc boinc   1516240 Dec 16 05:02 agis_ddmendpoints.agis.ALL.json
[2025-12-16 06:43:21] drwx------ 5 boinc boinc      4096 Dec 16 05:02 pilot3
[2025-12-16 06:43:21] -rw------- 1 boinc boinc 210486894 Dec 16 06:42 HITS.47905907._000492.pool.root.1
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc       529 Dec 16 06:42 boinc_task_state.xml
[2025-12-16 06:43:21] -rw------- 1 boinc boinc        95 Dec 16 06:42 pilot_heartbeat.json
[2025-12-16 06:43:21] -rw------- 1 boinc boinc      1018 Dec 16 06:42 memory_monitor_summary.json
[2025-12-16 06:43:21] -rw------- 1 boinc boinc    291124 Dec 16 06:42 log.47905907._000492.job.log.tgz.1
[2025-12-16 06:43:21] -rw------- 1 boinc boinc      7747 Dec 16 06:42 heartbeat.json
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc      8192 Dec 16 06:42 boinc_mmap_file
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc        27 Dec 16 06:42 wrapper_checkpoint.txt
[2025-12-16 06:43:21] -rw------- 1 boinc boinc       747 Dec 16 06:43 pilotlog.txt
[2025-12-16 06:43:21] -rw------- 1 boinc boinc    869535 Dec 16 06:43 log.47905907._000492.job.log.1
[2025-12-16 06:43:21] -rw------- 1 boinc boinc       357 Dec 16 06:43 output.list
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc       620 Dec 16 06:43 runtime_log
[2025-12-16 06:43:21] -rw------- 1 boinc boinc   1177600 Dec 16 06:43 result.tar.gz
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc      8902 Dec 16 06:43 runtime_log.err
[2025-12-16 06:43:21] -rw------- 1 boinc boinc       660 Dec 16 06:43 Rj1MDmNnNp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmbTKDmv428Do.diag
[2025-12-16 06:43:21] -rw-r--r-- 1 boinc boinc      8978 Dec 16 06:43 stderr.txt
[2025-12-16 06:43:21] HITS file was successfully produced:
[2025-12-16 06:43:21] -rw------- 1 boinc boinc 210486894 Dec 16 06:42 shared/HITS.pool.root.1
[2025-12-16 06:43:21]  *** Contents of shared directory: ***
[2025-12-16 06:43:21] total 409340
[2025-12-16 06:43:21] -rw-r--r-- 2 boinc boinc 206872862 Dec 16 05:02 ATLAS.root_0
[2025-12-16 06:43:21] -rw-r--r-- 2 boinc boinc    592379 Dec 16 05:02 input.tar.gz
[2025-12-16 06:43:21] -rw-r--r-- 2 boinc boinc     15847 Dec 16 05:02 start_atlas.sh
[2025-12-16 06:43:21] -rw------- 1 boinc boinc 210486894 Dec 16 06:42 HITS.pool.root.1
[2025-12-16 06:43:21] -rw------- 1 boinc boinc   1177600 Dec 16 06:43 result.tar.gz
06:43:23 (1285665): run_atlas exited; CPU time 22841.939476
06:43:23 (1285665): called boinc_finish(0)

</stderr_txt>
]]>

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