Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:30:26 (3701941): wrapper (7.7.26015): starting
13:30:26 (3701941): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 13:30:26] Arguments: --nthreads 8
[2025-12-15 13:30:26] Threads: 8
[2025-12-15 13:30:26] Checking for CVMFS
[2025-12-15 13:30:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 13:30:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 13:30:28] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 13:30:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 13:30:29] 2.13.2.0 7154 61446 162716 154042 0 123 38838601 40960000 9977 16776704 0 57648993 99.703 49652283 37089 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 13:30:29] CVMFS is ok
[2025-12-15 13:30:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 13:30:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 13:30:29] Further information can be found at the LHC@home message board.
[2025-12-15 13:30:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 13:30:29] Checking for apptainer binary...
[2025-12-15 13:30:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 13:30:29] Running /usr/bin/apptainer --version
[2025-12-15 13:30:29] apptainer version 1.4.4-1.el9
[2025-12-15 13:30:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 13:30:29] c-211-7.aglt2.org
[2025-12-15 13:30:29] apptainer works
[2025-12-15 13:30:29] Set ATHENA_PROC_NUMBER=8
[2025-12-15 13:30:29] Set ATHENA_CORE_NUMBER=8
[2025-12-15 13:30:29] Starting ATLAS job with PandaID=6929804574
[2025-12-15 13:30:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 12:44:23]  *** The last 200 lines of the pilot log: ***
[2025-12-16 12:44:23] 2025-12-16 17:43:39,880 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 12:44:23] 2025-12-16 17:43:39,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 12:44:23] 2025-12-16 17:43:39,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 12:44:23] 2025-12-16 17:43:39,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 12:44:23] 2025-12-16 17:43:40,026 | INFO     | fitting pss+swap vs Time
[2025-12-16 12:44:23] 2025-12-16 17:43:40,044 | INFO     | sum of square deviations: 792093264171.7408
[2025-12-16 12:44:23] 2025-12-16 17:43:40,372 | INFO     | sum of deviations: -297589050152.18286
[2025-12-16 12:44:23] 2025-12-16 17:43:40,373 | INFO     | mean x: 1765865260.4974396
[2025-12-16 12:44:23] 2025-12-16 17:43:40,373 | INFO     | mean y: 2509606.6620336506
[2025-12-16 12:44:23] 2025-12-16 17:43:40,373 | INFO     | intersect: 665944317.3683113
[2025-12-16 12:44:23] 2025-12-16 17:43:40,393 | INFO     | chi2: 7.594035974621072
[2025-12-16 12:44:23] 2025-12-16 17:43:40,395 | INFO     | sum of square deviations: 783433485943.0011
[2025-12-16 12:44:23] 2025-12-16 17:43:41,223 | INFO     | sum of deviations: 149996132029.67084
[2025-12-16 12:44:23] 2025-12-16 17:43:41,223 | INFO     | mean x: 1765865107.9992657
[2025-12-16 12:44:23] 2025-12-16 17:43:41,223 | INFO     | mean y: 2517488.671071953
[2025-12-16 12:44:23] 2025-12-16 17:43:41,224 | INFO     | intersect: -335574947.5581827
[2025-12-16 12:44:23] 2025-12-16 17:43:41,226 | INFO     | chi2: 3.876636592913611
[2025-12-16 12:44:23] 2025-12-16 17:43:41,226 | INFO     | current chi2=3.876636592913611 (change=48.95156401853827 %)
[2025-12-16 12:44:23] 2025-12-16 17:43:41,516 | INFO     | sum of square deviations: 774836974779.2498
[2025-12-16 12:44:23] 2025-12-16 17:43:42,190 | INFO     | sum of deviations: 333586551812.3351
[2025-12-16 12:44:23] 2025-12-16 17:43:42,191 | INFO     | mean x: 1765864955.5003684
[2025-12-16 12:44:23] 2025-12-16 17:43:42,191 | INFO     | mean y: 2520738.3308769343
[2025-12-16 12:44:23] 2025-12-16 17:43:42,191 | INFO     | intersect: -757727959.9703825
[2025-12-16 12:44:23] 2025-12-16 17:43:42,196 | INFO     | chi2: 2.295155400249002
[2025-12-16 12:44:23] 2025-12-16 17:43:42,196 | INFO     | current chi2=2.295155400249002 (change=40.79518816789571 %)
[2025-12-16 12:44:23] 2025-12-16 17:43:42,198 | INFO     | sum of square deviations: 766303580833.9977
[2025-12-16 12:44:23] 2025-12-16 17:43:42,305 | INFO     | monitor loop #5122: job 0:6929804574 is in state 'finished'
[2025-12-16 12:44:23] 2025-12-16 17:43:42,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 12:44:23] 2025-12-16 17:43:42,828 | INFO     | sum of deviations: 333025015837.444
[2025-12-16 12:44:23] 2025-12-16 17:43:42,829 | INFO     | mean x: 1765864803.0014794
[2025-12-16 12:44:23] 2025-12-16 17:43:42,829 | INFO     | mean y: 2520728.278106509
[2025-12-16 12:44:23] 2025-12-16 17:43:42,829 | INFO     | intersect: -764899871.9836404
[2025-12-16 12:44:23] 2025-12-16 17:43:42,880 | INFO     | chi2: 2.295166990987311
[2025-12-16 12:44:23] 2025-12-16 17:43:42,880 | INFO     | current chi2=2.295166990987311 (change=-0.0005050088681332967 %)
[2025-12-16 12:44:23] 2025-12-16 17:43:42,881 | INFO     | right removable region: 1351
[2025-12-16 12:44:23] 2025-12-16 17:43:42,916 | INFO     | sum of square deviations: 783433071143.0007
[2025-12-16 12:44:23] 2025-12-16 17:43:43,961 | INFO     | sum of deviations: -568551835965.6068
[2025-12-16 12:44:23] 2025-12-16 17:43:44,028 | INFO     | mean x: 1765865412.9992657
[2025-12-16 12:44:23] 2025-12-16 17:43:44,028 | INFO     | mean y: 2514372.393538913
[2025-12-16 12:44:23] 2025-12-16 17:43:44,028 | INFO     | intersect: 1284035487.0997605
[2025-12-16 12:44:23] 2025-12-16 17:43:44,031 | INFO     | chi2: 5.766506638576565
[2025-12-16 12:44:23] 2025-12-16 17:43:44,031 | INFO     | current chi2=5.766506638576565 (change=24.06532365861879 %)
[2025-12-16 12:44:23] 2025-12-16 17:43:44,031 | INFO     | left removable region: 10
[2025-12-16 12:44:23] 2025-12-16 17:43:44,207 | INFO     | sum of square deviations: 747750496101.207
[2025-12-16 12:44:23] 2025-12-16 17:43:44,566 | INFO     | sum of deviations: 39824600701.79867
[2025-12-16 12:44:23] 2025-12-16 17:43:44,567 | INFO     | mean x: 1765865077.5055928
[2025-12-16 12:44:23] 2025-12-16 17:43:44,567 | INFO     | mean y: 2525997.3601789707
[2025-12-16 12:44:23] 2025-12-16 17:43:44,567 | INFO     | intersect: -91522581.63988446
[2025-12-16 12:44:23] 2025-12-16 17:43:44,569 | INFO     | chi2: 0.42196421324258643
[2025-12-16 12:44:23] 2025-12-16 17:43:44,570 | INFO     | current memory leak: 0.05 B/s (using 1341 data points, chi2=0.42)
[2025-12-16 12:44:23] 2025-12-16 17:43:44,571 | INFO     | could have reported an average CPU frequency of 2528 MHz (49 samples)
[2025-12-16 12:44:23] 2025-12-16 17:43:44,571 | INFO     | ..............................
[2025-12-16 12:44:23] 2025-12-16 17:43:44,572 | INFO     | . Timing measurements:
[2025-12-16 12:44:23] 2025-12-16 17:43:44,572 | INFO     | . get job = 0 s
[2025-12-16 12:44:23] 2025-12-16 17:43:44,572 | INFO     | . initial setup = 4 s
[2025-12-16 12:44:23] 2025-12-16 17:43:44,572 | INFO     | . payload setup = 32 s
[2025-12-16 12:44:23] 2025-12-16 17:43:44,572 | INFO     | . stage-in = 0 s
[2025-12-16 12:44:23] 2025-12-16 17:43:44,572 | INFO     | . payload execution = 83386 s
[2025-12-16 12:44:23] 2025-12-16 17:43:44,572 | INFO     | . stage-out = 11 s
[2025-12-16 12:44:23] 2025-12-16 17:43:44,572 | INFO     | . log creation = 7 s
[2025-12-16 12:44:23] 2025-12-16 17:43:44,573 | INFO     | ..............................
[2025-12-16 12:44:23] 2025-12-16 17:43:45,810 | INFO     | 
[2025-12-16 12:44:23] 2025-12-16 17:43:45,810 | INFO     | job summary report
[2025-12-16 12:44:23] 2025-12-16 17:43:45,810 | INFO     | --------------------------------------------------
[2025-12-16 12:44:23] 2025-12-16 17:43:45,810 | INFO     | PanDA job id: 6929804574
[2025-12-16 12:44:23] 2025-12-16 17:43:45,810 | INFO     | task id: 47905907
[2025-12-16 12:44:23] 2025-12-16 17:43:45,810 | INFO     | errors: (none)
[2025-12-16 12:44:23] 2025-12-16 17:43:45,811 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 12:44:23] 2025-12-16 17:43:45,811 | INFO     | pilot state: finished 
[2025-12-16 12:44:23] 2025-12-16 17:43:45,811 | INFO     | transexitcode: 0
[2025-12-16 12:44:23] 2025-12-16 17:43:45,811 | INFO     | exeerrorcode: 0
[2025-12-16 12:44:23] 2025-12-16 17:43:45,811 | INFO     | exeerrordiag: 
[2025-12-16 12:44:23] 2025-12-16 17:43:45,811 | INFO     | exitcode: 0
[2025-12-16 12:44:23] 2025-12-16 17:43:45,811 | INFO     | exitmsg: OK
[2025-12-16 12:44:23] 2025-12-16 17:43:45,811 | INFO     | cpuconsumptiontime: 87320 s
[2025-12-16 12:44:23] 2025-12-16 17:43:45,811 | INFO     | nevents: 400
[2025-12-16 12:44:23] 2025-12-16 17:43:45,811 | INFO     | neventsw: 0
[2025-12-16 12:44:23] 2025-12-16 17:43:45,812 | INFO     | pid: 3712387
[2025-12-16 12:44:23] 2025-12-16 17:43:45,812 | INFO     | pgrp: 3712387
[2025-12-16 12:44:23] 2025-12-16 17:43:45,812 | INFO     | corecount: 8
[2025-12-16 12:44:23] 2025-12-16 17:43:45,812 | INFO     | event service: False
[2025-12-16 12:44:23] 2025-12-16 17:43:45,812 | INFO     | sizes: {0: 2283737, 1: 2283765, 2: 2283964, 13: 2283964, 24: 2284310, 35: 2284310, 83424: 2347324, 83437: 2356322, 83439: 2356378, 83486: 2356572}
[2025-12-16 12:44:23] 2025-12-16 17:43:45,812 | INFO     | --------------------------------------------------
[2025-12-16 12:44:23] 2025-12-16 17:43:45,812 | INFO     | 
[2025-12-16 12:44:23] 2025-12-16 17:43:45,812 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-16 12:44:23] 2025-12-16 17:43:46,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,115 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,115 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,115 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 12:44:23] 2025-12-16 17:43:46,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 12:44:23] 2025-12-16 17:43:46,117 | INFO     | job 6929804574 has completed (purged errors)
[2025-12-16 12:44:23] 2025-12-16 17:43:46,118 | INFO     | overall cleanup function is called
[2025-12-16 12:44:23] 2025-12-16 17:43:46,560 | INFO     | PID=3705771 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 12:44:23] 2025-12-16 17:43:46,560 | INFO     | .. there are 10 such processes running
[2025-12-16 12:44:23] 2025-12-16 17:43:47,202 | INFO     | --- collectZombieJob: --- 10, [3712387]
[2025-12-16 12:44:23] 2025-12-16 17:43:47,202 | INFO     | zombie collector waiting for pid 3712387
[2025-12-16 12:44:23] 2025-12-16 17:43:47,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 12:44:23] 2025-12-16 17:43:47,202 | INFO     | collected zombie processes
[2025-12-16 12:44:23] 2025-12-16 17:43:47,202 | INFO     | will attempt to kill all subprocesses of pid=3712387
[2025-12-16 12:44:23] 2025-12-16 17:43:49,610 | INFO     | process IDs to be killed: [3712387] (in reverse order)
[2025-12-16 12:44:23] 2025-12-16 17:43:49,855 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 12:44:23] 2025-12-16 17:43:49,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 12:44:23] 2025-12-16 17:43:49,867 | INFO     | did not find any defunct processes belonging to 3712387
[2025-12-16 12:44:23] 2025-12-16 17:43:49,878 | INFO     | did not find any defunct processes belonging to 3712387
[2025-12-16 12:44:23] 2025-12-16 17:43:49,878 | INFO     | ready for new job
[2025-12-16 12:44:23] 2025-12-16 17:43:49,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 12:44:23] 2025-12-16 17:43:49,884 | INFO     | ***************************************
[2025-12-16 12:44:23] 2025-12-16 17:43:49,884 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 12:44:23] 2025-12-16 17:43:49,884 | INFO     | ***************************************
[2025-12-16 12:44:23] 2025-12-16 17:43:49,884 | INFO     | 
[2025-12-16 12:44:23] 2025-12-16 17:43:49,888 | INFO     | architecture information:
[2025-12-16 12:44:23] 2025-12-16 17:43:49,889 | INFO     | executing command: cat /etc/os-release
[2025-12-16 12:44:23] 2025-12-16 17:43:49,908 | INFO     | cat /etc/os-release:
[2025-12-16 12:44:23] NAME="CentOS Linux"
[2025-12-16 12:44:23] VERSION="7 (Core)"
[2025-12-16 12:44:23] ID="centos"
[2025-12-16 12:44:23] ID_LIKE="rhel fedora"
[2025-12-16 12:44:23] VERSION_ID="7"
[2025-12-16 12:44:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 12:44:23] ANSI_COLOR="0;31"
[2025-12-16 12:44:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 12:44:23] HOME_URL="https://www.centos.org/"
[2025-12-16 12:44:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 12:44:23] 
[2025-12-16 12:44:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 12:44:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 12:44:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 12:44:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 12:44:23] 
[2025-12-16 12:44:23] 2025-12-16 17:43:49,908 | INFO     | ***************************************
[2025-12-16 12:44:23] 2025-12-16 17:43:50,412 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-16 12:44:23] 2025-12-16 17:43:50,521 | INFO     | sufficient remaining disk space (62890442752 B)
[2025-12-16 12:44:23] 2025-12-16 17:43:50,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 12:44:23] 2025-12-16 17:43:50,522 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 12:44:23] 2025-12-16 17:43:50,522 | INFO     | update_server=False
[2025-12-16 12:44:23] 2025-12-16 17:43:50,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 12:44:23] 2025-12-16 17:43:50,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 12:44:23] 2025-12-16 17:43:50,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 12:44:23] 2025-12-16 17:43:50,840 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 12:44:23] 2025-12-16 17:43:50,946 | INFO     | all data control threads have been joined
[2025-12-16 12:44:23] 2025-12-16 17:43:51,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 12:44:23] 2025-12-16 17:43:51,057 | INFO     | aborting loop
[2025-12-16 12:44:23] 2025-12-16 17:43:51,062 | INFO     | all job control threads have been joined
[2025-12-16 12:44:23] 2025-12-16 17:43:51,069 | INFO     | all payload control threads have been joined
[2025-12-16 12:44:23] 2025-12-16 17:43:51,523 | INFO     | [monitor] cgroup control has ended
[2025-12-16 12:44:23] 2025-12-16 17:43:51,527 | INFO     | [job] retrieve thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:51,846 | INFO     | [job] queue monitor thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:51,928 | INFO     | [payload] failed_post thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:51,952 | INFO     | [data] control thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:51,986 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:51,996 | INFO     | [data] copytool_in thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:52,062 | INFO     | [job] validate thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:52,063 | INFO     | [job] job monitor thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:52,085 | INFO     | [job] control thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:52,086 | INFO     | [payload] control thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:52,495 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:52,531 | INFO     | [data] copytool_out thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:52,666 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:52,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:53,019 | INFO     | [payload] validate_post thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:54,546 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 12:44:23] 2025-12-16 17:43:55,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140036560840512)>', '<ExcThread(monitor, started 140036280387328)>']
[2025-12-16 12:44:23] 2025-12-16 17:44:00,788 | INFO     | all workflow threads have been joined
[2025-12-16 12:44:23] 2025-12-16 17:44:00,788 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 12:44:23] 2025-12-16 17:44:00,788 | INFO     | traces error code: 0
[2025-12-16 12:44:23] 2025-12-16 17:44:00,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 12:44:23] 2025-12-16 17:44:17,672 | INFO     | 83551s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-16 12:44:23] 2025-12-16 17:44:20,013 | INFO     | PID=3705771 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 12:44:23] 2025-12-16 17:44:20,013 | INFO     | .. there are 10 such processes running
[2025-12-16 12:44:23] 2025-12-16 17:44:20,014 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 12:44:23] 2025-12-16 17:44:20,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 12:44:23] 2025-12-16 17:44:20,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 12:44:23] 2025-12-16 17:44:20,015 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 12:44:23] 2025-12-16 17:44:20,015 | CRITICAL | thread 'MainThread' is not alive
[2025-12-16 12:44:23] 2025-12-16 17:44:20,015 | INFO     | [monitor] control thread has ended
[2025-12-16 12:44:23] 2025-12-16 17:44:20,870 [wrapper] ==== pilot stdout END ====
[2025-12-16 12:44:23] 2025-12-16 17:44:20,904 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 12:44:23] 2025-12-16 17:44:20,954 [wrapper] pilotpid: 3705771
[2025-12-16 12:44:23] 2025-12-16 17:44:20,994 [wrapper] Pilot exit status: 0
[2025-12-16 12:44:23] 2025-12-16 17:44:21,333 [wrapper] pandaids: 6929804574
[2025-12-16 12:44:23] 2025-12-16 17:44:21,599 [wrapper] cleanup supervisor_pilot 1487559 3705772
[2025-12-16 12:44:23] 2025-12-16 17:44:21,638 [wrapper] Test setup, not cleaning
[2025-12-16 12:44:23] 2025-12-16 17:44:21,697 [wrapper] apfmon messages muted
[2025-12-16 12:44:23] 2025-12-16 17:44:21,755 [wrapper] ==== wrapper stdout END ====
[2025-12-16 12:44:23] 2025-12-16 17:44:21,802 [wrapper] ==== wrapper stderr END ====
[2025-12-16 12:44:23]  *** Error codes and diagnostics ***
[2025-12-16 12:44:23]     "exeErrorCode": 0,
[2025-12-16 12:44:23]     "exeErrorDiag": "",
[2025-12-16 12:44:23]     "pilotErrorCode": 0,
[2025-12-16 12:44:23]     "pilotErrorDiag": "",
[2025-12-16 12:44:23]  *** Listing of results directory ***
[2025-12-16 12:44:23] total 436704
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 08:27 pilot3.tar.gz
[2025-12-16 12:44:23] -rwx------. 1 boincer umatlas     36322 Dec 15 08:27 runpilot2-wrapper.sh
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 08:29 queuedata.json
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas       100 Dec 15 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 12:44:23] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 13:30 run_atlas
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas       105 Dec 15 13:30 job.xml
[2025-12-16 12:44:23] -rw-r--r--. 2 boincer umatlas 203121876 Dec 15 13:30 EVNT.47905905._000018.pool.root.1
[2025-12-16 12:44:23] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 13:30 start_atlas.sh
[2025-12-16 12:44:23] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 13:30 shared
[2025-12-16 12:44:23] -rw-r--r--. 2 boincer umatlas    592380 Dec 15 13:30 input.tar.gz
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas         0 Dec 15 13:30 boinc_lockfile
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas      2475 Dec 15 13:30 pandaJob.out
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas        57 Dec 15 13:30 setup.sh.local
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas    994497 Dec 15 13:31 agis_schedconf.cvmfs.json
[2025-12-16 12:44:23] drwx------. 5 boincer umatlas      4096 Dec 15 13:31 pilot3
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas 216551663 Dec 16 12:34 HITS.47905907._000368.pool.root.1
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas       531 Dec 16 12:35 boinc_task_state.xml
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas      6613 Dec 16 12:36 init_data.xml
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas      1053 Dec 16 12:42 memory_monitor_summary.json
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas   1516240 Dec 16 12:42 agis_ddmendpoints.agis.ALL.json
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas   1339006 Dec 16 12:42 log.47905907._000368.job.log.tgz.1
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas      7839 Dec 16 12:43 heartbeat.json
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 12:44 boinc_mmap_file
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas        28 Dec 16 12:44 wrapper_checkpoint.txt
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas        95 Dec 16 12:44 pilot_heartbeat.json
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas      1009 Dec 16 12:44 pilotlog.txt
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas  10460384 Dec 16 12:44 log.47905907._000368.job.log.1
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas       357 Dec 16 12:44 output.list
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas       620 Dec 16 12:44 runtime_log
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas  11816960 Dec 16 12:44 result.tar.gz
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas      9338 Dec 16 12:44 runtime_log.err
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas       661 Dec 16 12:44 kv4NDmMnNp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZaTKDmKH0ddm.diag
[2025-12-16 12:44:23] -rw-r--r--. 1 boincer umatlas     21275 Dec 16 12:44 stderr.txt
[2025-12-16 12:44:23] HITS file was successfully produced:
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas 216551663 Dec 16 12:34 shared/HITS.pool.root.1
[2025-12-16 12:44:23]  *** Contents of shared directory: ***
[2025-12-16 12:44:23] total 421984
[2025-12-16 12:44:23] -rw-r--r--. 2 boincer umatlas 203121876 Dec 15 13:30 ATLAS.root_0
[2025-12-16 12:44:23] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 13:30 start_atlas.sh
[2025-12-16 12:44:23] -rw-r--r--. 2 boincer umatlas    592380 Dec 15 13:30 input.tar.gz
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas 216551663 Dec 16 12:34 HITS.pool.root.1
[2025-12-16 12:44:23] -rw-------. 1 boincer umatlas  11816960 Dec 16 12:44 result.tar.gz
12:44:45 (3701941): run_atlas exited; CPU time 90383.669551
12:44:45 (3701941): called boinc_finish(0)

</stderr_txt>
]]>

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