Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:21:04 (3047745): wrapper (7.7.26015): starting
15:21:04 (3047745): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 15:21:04] Arguments: --nthreads 8
[2025-12-15 15:21:04] Threads: 8
[2025-12-15 15:21:04] Checking for CVMFS
[2025-12-15 15:21:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 15:21:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 15:21:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 15:21:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 15:21:08] 2.13.3.0 5641 18543 215036 154046 0 333 26185901 32935937 16818 16776704 0 47001475 99.209 90393353 36234 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-15 15:21:08] CVMFS is ok
[2025-12-15 15:21:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 15:21:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 15:21:08] Further information can be found at the LHC@home message board.
[2025-12-15 15:21:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 15:21:08] Checking for apptainer binary...
[2025-12-15 15:21:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 15:21:08] Running /usr/bin/apptainer --version
[2025-12-15 15:21:08] apptainer version 1.4.5-2.el9
[2025-12-15 15:21:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 15:21:09] c6-1-26-1.aglt2.org
[2025-12-15 15:21:09] apptainer works
[2025-12-15 15:21:09] Set ATHENA_PROC_NUMBER=8
[2025-12-15 15:21:09] Set ATHENA_CORE_NUMBER=8
[2025-12-15 15:21:09] Starting ATLAS job with PandaID=6929722462
[2025-12-15 15:21:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 19:27:53]  *** The last 200 lines of the pilot log: ***
[2025-12-15 19:27:53] 2025-12-16 00:26:41,247 | INFO     | .. there are 17 such processes running
[2025-12-15 19:27:53] 2025-12-16 00:26:42,248 | INFO     | time since job start (14662s) is within the limit (174528.0s)
[2025-12-15 19:27:53] 2025-12-16 00:26:43,510 | INFO     | monitor loop #859: job 0:6929722462 is in state 'finished'
[2025-12-15 19:27:53] 2025-12-16 00:26:43,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 19:27:53] 2025-12-16 00:26:44,255 | INFO     | time since job start (14664s) is within the limit (174528.0s)
[2025-12-15 19:27:53] 2025-12-16 00:26:46,016 | INFO     | monitor loop #860: job 0:6929722462 is in state 'finished'
[2025-12-15 19:27:53] 2025-12-16 00:26:46,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 19:27:53] 2025-12-16 00:26:46,272 | INFO     | time since job start (14666s) is within the limit (174528.0s)
[2025-12-15 19:27:53] 2025-12-16 00:26:47,822 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-15 19:27:53] 2025-12-16 00:26:47,826 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2763.8271250000003
[2025-12-15 19:27:53] 2025-12-16 00:26:47,835 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929722462/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 19:27:53] 2025-12-16 00:26:47,836 | INFO     | extracted standard info from prmon json
[2025-12-15 19:27:53] 2025-12-16 00:26:47,836 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 19:27:53] 2025-12-16 00:26:47,837 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 19:27:53] 2025-12-16 00:26:47,837 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 19:27:53] 2025-12-16 00:26:47,837 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 19:27:53] 2025-12-16 00:26:47,841 | INFO     | fitting pss+swap vs Time
[2025-12-15 19:27:53] 2025-12-16 00:26:47,842 | INFO     | sum of square deviations: 4180339372.138675
[2025-12-15 19:27:53] 2025-12-16 00:26:47,843 | INFO     | sum of deviations: -44788252192.86134
[2025-12-15 19:27:53] 2025-12-16 00:26:47,843 | INFO     | mean x: 1765837537.2815125
[2025-12-15 19:27:53] 2025-12-16 00:26:47,843 | INFO     | mean y: 2560225.281512605
[2025-12-15 19:27:53] 2025-12-16 00:26:47,843 | INFO     | intersect: 18921784219.031933
[2025-12-15 19:27:53] 2025-12-16 00:26:47,843 | INFO     | chi2: 3.2726132416303764
[2025-12-15 19:27:53] 2025-12-16 00:26:47,844 | INFO     | sum of square deviations: 3922428471.519317
[2025-12-15 19:27:53] 2025-12-16 00:26:47,845 | INFO     | sum of deviations: -28255990725.635216
[2025-12-15 19:27:53] 2025-12-16 00:26:47,845 | INFO     | mean x: 1765837384.7982833
[2025-12-15 19:27:53] 2025-12-16 00:26:47,845 | INFO     | mean y: 2569849.4120171675
[2025-12-15 19:27:53] 2025-12-16 00:26:47,845 | INFO     | intersect: 12723129352.314482
[2025-12-15 19:27:53] 2025-12-16 00:26:47,846 | INFO     | chi2: 2.60463517382806
[2025-12-15 19:27:53] 2025-12-16 00:26:47,846 | INFO     | current chi2=2.60463517382806 (change=20.411152143035935 %)
[2025-12-15 19:27:53] 2025-12-16 00:26:47,846 | INFO     | right removable region: 232
[2025-12-15 19:27:53] 2025-12-16 00:26:47,850 | INFO     | sum of square deviations: 3922329286.111565
[2025-12-15 19:27:53] 2025-12-16 00:26:47,852 | INFO     | sum of deviations: -96272943900.33481
[2025-12-15 19:27:53] 2025-12-16 00:26:47,852 | INFO     | mean x: 1765837689.7939913
[2025-12-15 19:27:53] 2025-12-16 00:26:47,852 | INFO     | mean y: 2590485.618025751
[2025-12-15 19:27:53] 2025-12-16 00:26:47,852 | INFO     | intersect: 43344793662.84466
[2025-12-15 19:27:53] 2025-12-16 00:26:47,852 | INFO     | chi2: 1.18845246063896
[2025-12-15 19:27:53] 2025-12-16 00:26:47,853 | INFO     | current chi2=1.18845246063896 (change=63.684909493097095 %)
[2025-12-15 19:27:53] 2025-12-16 00:26:47,853 | INFO     | sum of square deviations: 3675156856.5087624
[2025-12-15 19:27:53] 2025-12-16 00:26:47,896 | INFO     | sum of deviations: -100615020583.83333
[2025-12-15 19:27:53] 2025-12-16 00:26:47,897 | INFO     | mean x: 1765837842.3070176
[2025-12-15 19:27:53] 2025-12-16 00:26:47,897 | INFO     | mean y: 2593133.5833333335
[2025-12-15 19:27:53] 2025-12-16 00:26:47,901 | INFO     | intersect: 48346056498.086075
[2025-12-15 19:27:53] 2025-12-16 00:26:47,902 | INFO     | chi2: 1.1217453393425578
[2025-12-15 19:27:53] 2025-12-16 00:26:47,902 | INFO     | current chi2=1.1217453393425578 (change=5.612939810864431 %)
[2025-12-15 19:27:53] 2025-12-16 00:26:47,902 | INFO     | left removable region: 20
[2025-12-15 19:27:53] 2025-12-16 00:26:47,902 | INFO     | sum of square deviations: 2954467225.5471635
[2025-12-15 19:27:53] 2025-12-16 00:26:47,904 | INFO     | sum of deviations: -66901420602.056595
[2025-12-15 19:27:53] 2025-12-16 00:26:47,904 | INFO     | mean x: 1765837964.3396227
[2025-12-15 19:27:53] 2025-12-16 00:26:47,904 | INFO     | mean y: 2592773.7924528304
[2025-12-15 19:27:53] 2025-12-16 00:26:47,904 | INFO     | intersect: 39988505410.032875
[2025-12-15 19:27:53] 2025-12-16 00:26:47,904 | INFO     | chi2: 0.39969150605184656
[2025-12-15 19:27:53] 2025-12-16 00:26:47,905 | INFO     | current memory leak: -22.64 B/s (using 212 data points, chi2=0.40)
[2025-12-15 19:27:53] 2025-12-16 00:26:47,907 | INFO     | could have reported an average CPU frequency of 2785 MHz (11 samples)
[2025-12-15 19:27:53] 2025-12-16 00:26:47,907 | INFO     | ..............................
[2025-12-15 19:27:53] 2025-12-16 00:26:47,908 | INFO     | . Timing measurements:
[2025-12-15 19:27:53] 2025-12-16 00:26:47,908 | INFO     | . get job = 1 s
[2025-12-15 19:27:53] 2025-12-16 00:26:47,908 | INFO     | . initial setup = 5 s
[2025-12-15 19:27:53] 2025-12-16 00:26:47,908 | INFO     | . payload setup = 49 s
[2025-12-15 19:27:53] 2025-12-16 00:26:47,908 | INFO     | . stage-in = 0 s
[2025-12-15 19:27:53] 2025-12-16 00:26:47,908 | INFO     | . payload execution = 14511 s
[2025-12-15 19:27:53] 2025-12-16 00:26:47,908 | INFO     | . stage-out = 3 s
[2025-12-15 19:27:53] 2025-12-16 00:26:47,908 | INFO     | . log creation = 0 s
[2025-12-15 19:27:53] 2025-12-16 00:26:47,908 | INFO     | ..............................
[2025-12-15 19:27:53] 2025-12-16 00:26:48,136 | INFO     | 
[2025-12-15 19:27:53] 2025-12-16 00:26:48,136 | INFO     | job summary report
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | --------------------------------------------------
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | PanDA job id: 6929722462
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | task id: 47898763
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | errors: (none)
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | pilot state: finished 
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | transexitcode: 0
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | exeerrorcode: 0
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | exeerrordiag: 
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | exitcode: 0
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | exitmsg: OK
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | cpuconsumptiontime: 58021 s
[2025-12-15 19:27:53] 2025-12-16 00:26:48,137 | INFO     | nevents: 400
[2025-12-15 19:27:53] 2025-12-16 00:26:48,138 | INFO     | neventsw: 0
[2025-12-15 19:27:53] 2025-12-16 00:26:48,138 | INFO     | pid: 3061920
[2025-12-15 19:27:53] 2025-12-16 00:26:48,138 | INFO     | pgrp: 3061920
[2025-12-15 19:27:53] 2025-12-16 00:26:48,138 | INFO     | corecount: 8
[2025-12-15 19:27:53] 2025-12-16 00:26:48,138 | INFO     | event service: False
[2025-12-15 19:27:53] 2025-12-16 00:26:48,138 | INFO     | sizes: {0: 2283787, 1: 2283787, 2: 2284014, 3: 2284014, 14: 2284042, 26: 2284070, 36: 2284226, 38: 2284516, 48: 2284544, 14566: 2315305, 14570: 2324303, 14573: 232
[2025-12-15 19:27:53] 2025-12-16 00:26:48,138 | INFO     | --------------------------------------------------
[2025-12-15 19:27:53] 2025-12-16 00:26:48,138 | INFO     | 
[2025-12-15 19:27:53] 2025-12-16 00:26:48,138 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-15 19:27:53] 2025-12-16 00:26:48,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 19:27:53] 2025-12-16 00:26:48,187 | INFO     | job 6929722462 has completed (purged errors)
[2025-12-15 19:27:53] 2025-12-16 00:26:48,188 | INFO     | overall cleanup function is called
[2025-12-15 19:27:53] 2025-12-16 00:26:49,201 | INFO     | --- collectZombieJob: --- 10, [3061920]
[2025-12-15 19:27:53] 2025-12-16 00:26:49,201 | INFO     | zombie collector waiting for pid 3061920
[2025-12-15 19:27:53] 2025-12-16 00:26:49,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 19:27:53] 2025-12-16 00:26:49,201 | INFO     | collected zombie processes
[2025-12-15 19:27:53] 2025-12-16 00:26:49,202 | INFO     | will attempt to kill all subprocesses of pid=3061920
[2025-12-15 19:27:53] 2025-12-16 00:26:50,066 | INFO     | process IDs to be killed: [3061920] (in reverse order)
[2025-12-15 19:27:53] 2025-12-16 00:26:50,357 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 19:27:53] 2025-12-16 00:26:50,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 19:27:53] 2025-12-16 00:26:50,408 | INFO     | did not find any defunct processes belonging to 3061920
[2025-12-15 19:27:53] 2025-12-16 00:26:50,463 | INFO     | did not find any defunct processes belonging to 3061920
[2025-12-15 19:27:53] 2025-12-16 00:26:50,498 | INFO     | ready for new job
[2025-12-15 19:27:53] 2025-12-16 00:26:50,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 19:27:53] 2025-12-16 00:26:50,501 | INFO     | ***************************************
[2025-12-15 19:27:53] 2025-12-16 00:26:50,502 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 19:27:53] 2025-12-16 00:26:50,502 | INFO     | ***************************************
[2025-12-15 19:27:53] 2025-12-16 00:26:50,618 | INFO     | 
[2025-12-15 19:27:53] 2025-12-16 00:26:50,622 | INFO     | architecture information:
[2025-12-15 19:27:53] 2025-12-16 00:26:50,622 | INFO     | executing command: cat /etc/os-release
[2025-12-15 19:27:53] 2025-12-16 00:26:50,643 | INFO     | cat /etc/os-release:
[2025-12-15 19:27:53] NAME="CentOS Linux"
[2025-12-15 19:27:53] VERSION="7 (Core)"
[2025-12-15 19:27:53] ID="centos"
[2025-12-15 19:27:53] ID_LIKE="rhel fedora"
[2025-12-15 19:27:53] VERSION_ID="7"
[2025-12-15 19:27:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 19:27:53] ANSI_COLOR="0;31"
[2025-12-15 19:27:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 19:27:53] HOME_URL="https://www.centos.org/"
[2025-12-15 19:27:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 19:27:53] 
[2025-12-15 19:27:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 19:27:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 19:27:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 19:27:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 19:27:53] 
[2025-12-15 19:27:53] 2025-12-16 00:26:50,644 | INFO     | ***************************************
[2025-12-15 19:27:53] 2025-12-16 00:26:51,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-15 19:27:53] 2025-12-16 00:26:51,278 | INFO     | sufficient remaining disk space (74961649664 B)
[2025-12-15 19:27:53] 2025-12-16 00:26:51,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 19:27:53] 2025-12-16 00:26:51,278 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 19:27:53] 2025-12-16 00:26:51,278 | INFO     | update_server=False
[2025-12-15 19:27:53] 2025-12-16 00:26:51,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 19:27:53] 2025-12-16 00:26:51,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 19:27:53] 2025-12-16 00:26:51,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 19:27:53] 2025-12-16 00:26:51,834 | INFO     | all job control threads have been joined
[2025-12-15 19:27:53] 2025-12-16 00:26:52,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 19:27:53] 2025-12-16 00:26:52,128 | INFO     | aborting loop
[2025-12-15 19:27:53] 2025-12-16 00:26:52,169 | INFO     | all payload control threads have been joined
[2025-12-15 19:27:53] 2025-12-16 00:26:52,234 | INFO     | all data control threads have been joined
[2025-12-15 19:27:53] 2025-12-16 00:26:52,284 | INFO     | [job] retrieve thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:52,630 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:52,764 | INFO     | [payload] validate_post thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:52,840 | INFO     | [job] control thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:53,150 | INFO     | [job] job monitor thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:53,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 19:27:53] 2025-12-16 00:26:53,175 | INFO     | [payload] control thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:53,240 | INFO     | [data] control thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:53,344 | INFO     | [payload] failed_post thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:53,415 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:53,440 | INFO     | [data] copytool_in thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:53,442 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:53,480 | INFO     | [data] copytool_out thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:53,615 | INFO     | [job] validate thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:54,157 | INFO     | [job] queue monitor thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:26:55,302 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:27:01,346 | INFO     | job.realtimelogging is not enabled
[2025-12-15 19:27:53] 2025-12-16 00:27:02,368 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 19:27:53] 2025-12-16 00:27:22,087 | INFO     | PID=3053773 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 19:27:53] 2025-12-16 00:27:22,087 | INFO     | .. there are 17 such processes running
[2025-12-15 19:27:53] 2025-12-16 00:27:22,088 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 19:27:53] 2025-12-16 00:27:22,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 19:27:53] 2025-12-16 00:27:22,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 19:27:53] 2025-12-16 00:27:44,921 | INFO     | [monitor] cgroup control has ended
[2025-12-15 19:27:53] 2025-12-16 00:27:46,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354934933312)>', '<ExcThread(monitor, started 140354581927680)>']
[2025-12-15 19:27:53] 2025-12-16 00:27:47,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 19:27:53] 2025-12-16 00:27:47,345 | INFO     | [monitor] control thread has ended
[2025-12-15 19:27:53] 2025-12-16 00:27:51,839 | INFO     | all workflow threads have been joined
[2025-12-15 19:27:53] 2025-12-16 00:27:51,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 19:27:53] 2025-12-16 00:27:51,840 | INFO     | traces error code: 0
[2025-12-15 19:27:53] 2025-12-16 00:27:51,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 19:27:53] 2025-12-16 00:27:53,362 [wrapper] ==== pilot stdout END ====
[2025-12-15 19:27:53] 2025-12-16 00:27:53,382 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 19:27:53] 2025-12-16 00:27:53,385 [wrapper] pilotpid: 3053773
[2025-12-15 19:27:53] 2025-12-16 00:27:53,388 [wrapper] Pilot exit status: 0
[2025-12-15 19:27:53] 2025-12-16 00:27:53,422 [wrapper] pandaids: 6929722462
[2025-12-15 19:27:53] 2025-12-16 00:27:53,542 [wrapper] cleanup supervisor_pilot 3584234 3053774
[2025-12-15 19:27:53] 2025-12-16 00:27:53,545 [wrapper] Test setup, not cleaning
[2025-12-15 19:27:53] 2025-12-16 00:27:53,547 [wrapper] apfmon messages muted
[2025-12-15 19:27:53] 2025-12-16 00:27:53,550 [wrapper] ==== wrapper stdout END ====
[2025-12-15 19:27:53] 2025-12-16 00:27:53,552 [wrapper] ==== wrapper stderr END ====
[2025-12-15 19:27:53]  *** Error codes and diagnostics ***
[2025-12-15 19:27:53]     "exeErrorCode": 0,
[2025-12-15 19:27:53]     "exeErrorDiag": "",
[2025-12-15 19:27:53]     "pilotErrorCode": 0,
[2025-12-15 19:27:53]     "pilotErrorDiag": "",
[2025-12-15 19:27:53]  *** Listing of results directory ***
[2025-12-15 19:27:53] total 446964
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 08:27 queuedata.json
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 08:27 pilot3.tar.gz
[2025-12-15 19:27:53] -rwx------. 1 boincer umatlas     36322 Dec 15 08:27 runpilot2-wrapper.sh
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas       100 Dec 15 15:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 19:27:53] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 15:21 run_atlas
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas       105 Dec 15 15:21 job.xml
[2025-12-15 19:27:53] -rw-r--r--. 2 boincer umatlas 226843434 Dec 15 15:21 EVNT.47898761._000660.pool.root.1
[2025-12-15 19:27:53] -rw-r--r--. 2 boincer umatlas    592393 Dec 15 15:21 input.tar.gz
[2025-12-15 19:27:53] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 15:21 start_atlas.sh
[2025-12-15 19:27:53] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 15:21 shared
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas         0 Dec 15 15:21 boinc_lockfile
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas      2508 Dec 15 15:21 pandaJob.out
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas        57 Dec 15 15:21 setup.sh.local
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas    994539 Dec 15 15:22 agis_schedconf.cvmfs.json
[2025-12-15 19:27:53] drwx------. 5 boincer umatlas      4096 Dec 15 15:22 pilot3
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas      6841 Dec 15 19:19 init_data.xml
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas 222476532 Dec 15 19:25 HITS.47898763._016512.pool.root.1
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas       529 Dec 15 19:25 boinc_task_state.xml
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas      1041 Dec 15 19:26 memory_monitor_summary.json
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas   1516240 Dec 15 19:26 agis_ddmendpoints.agis.ALL.json
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas    445410 Dec 15 19:26 log.47898763._016512.job.log.tgz.1
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas        95 Dec 15 19:26 pilot_heartbeat.json
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas      7828 Dec 15 19:26 heartbeat.json
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 19:27 boinc_mmap_file
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas        27 Dec 15 19:27 wrapper_checkpoint.txt
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas      4896 Dec 15 19:27 pilotlog.txt
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas   1782786 Dec 15 19:27 log.47898763._016512.job.log.1
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas       357 Dec 15 19:27 output.list
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas       620 Dec 15 19:27 runtime_log
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas   2242560 Dec 15 19:27 result.tar.gz
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas      9348 Dec 15 19:27 runtime_log.err
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas       657 Dec 15 19:27 kJ8LDmgmNp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMUTKDmsdVEUm.diag
[2025-12-15 19:27:53] -rw-r--r--. 1 boincer umatlas     21392 Dec 15 19:27 stderr.txt
[2025-12-15 19:27:53] HITS file was successfully produced:
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas 222476532 Dec 15 19:25 shared/HITS.pool.root.1
[2025-12-15 19:27:53]  *** Contents of shared directory: ***
[2025-12-15 19:27:53] total 441584
[2025-12-15 19:27:53] -rw-r--r--. 2 boincer umatlas 226843434 Dec 15 15:21 ATLAS.root_0
[2025-12-15 19:27:53] -rw-r--r--. 2 boincer umatlas    592393 Dec 15 15:21 input.tar.gz
[2025-12-15 19:27:53] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 15:21 start_atlas.sh
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas 222476532 Dec 15 19:25 HITS.pool.root.1
[2025-12-15 19:27:53] -rw-------. 1 boincer umatlas   2242560 Dec 15 19:27 result.tar.gz
19:27:55 (3047745): run_atlas exited; CPU time 58498.457156
19:27:55 (3047745): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN