Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:07:00 (2260439): wrapper (7.7.26015): starting
14:07:00 (2260439): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 14:07:00] Arguments: --nthreads 4
[2025-12-16 14:07:00] Threads: 4
[2025-12-16 14:07:00] Checking for CVMFS
[2025-12-16 14:07:00] No cvmfs_config command found, will try listing directly
[2025-12-16 14:07:00] CVMFS is ok
[2025-12-16 14:07:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 14:07:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 14:07:00] Further information can be found at the LHC@home message board.
[2025-12-16 14:07:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 14:07:00] Checking for apptainer binary...
[2025-12-16 14:07:00] which: no apptainer in ((null))
[2025-12-16 14:07:00] apptainer is not installed, using version from CVMFS
[2025-12-16 14:07:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 14:07:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-12-16 14:07:00] apptainer works
[2025-12-16 14:07:00] Set ATHENA_PROC_NUMBER=4
[2025-12-16 14:07:00] Set ATHENA_CORE_NUMBER=4
[2025-12-16 14:07:00] Starting ATLAS job with PandaID=6928901375
[2025-12-16 14:07:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 18:15:35]  *** The last 200 lines of the pilot log: ***
[2025-12-16 18:15:35] 2025-12-16 16:44:47,394 | INFO     | time since job start (13054s) is within the limit (174528.0s)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,509 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 18:15:35] 2025-12-16 16:44:47,526 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2520.8336093749995
[2025-12-16 18:15:35] 2025-12-16 16:44:47,546 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6928901375/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,548 | INFO     | extracted standard info from prmon json
[2025-12-16 18:15:35] 2025-12-16 16:44:47,548 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 18:15:35] 2025-12-16 16:44:47,548 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 18:15:35] 2025-12-16 16:44:47,549 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 18:15:35] 2025-12-16 16:44:47,549 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 18:15:35] 2025-12-16 16:44:47,556 | INFO     | fitting pss+swap vs Time
[2025-12-16 18:15:35] 2025-12-16 16:44:47,557 | INFO     | sum of square deviations: 3038856977.5
[2025-12-16 18:15:35] 2025-12-16 16:44:47,559 | INFO     | sum of deviations: 18724245789.0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,560 | INFO     | mean x: 1765896959.5
[2025-12-16 18:15:35] 2025-12-16 16:44:47,560 | INFO     | mean y: 2299425.6355140186
[2025-12-16 18:15:35] 2025-12-16 16:44:47,560 | INFO     | intersect: -10878465596.391844
[2025-12-16 18:15:35] 2025-12-16 16:44:47,561 | INFO     | chi2: 1.965200951431398
[2025-12-16 18:15:35] 2025-12-16 16:44:47,561 | INFO     | sum of square deviations: 2830787960.0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,564 | INFO     | sum of deviations: 30430641536.000004
[2025-12-16 18:15:35] 2025-12-16 16:44:47,564 | INFO     | mean x: 1765896807.0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,564 | INFO     | mean y: 2307835.3636363638
[2025-12-16 18:15:35] 2025-12-16 16:44:47,564 | INFO     | intersect: -18980877582.516968
[2025-12-16 18:15:35] 2025-12-16 16:44:47,565 | INFO     | chi2: 1.2947663276648247
[2025-12-16 18:15:35] 2025-12-16 16:44:47,565 | INFO     | current chi2=1.2947663276648247 (change=34.11532155417731 %)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,565 | INFO     | sum of square deviations: 2632440055.0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,567 | INFO     | sum of deviations: 29639709161.5
[2025-12-16 18:15:35] 2025-12-16 16:44:47,568 | INFO     | mean x: 1765896654.5
[2025-12-16 18:15:35] 2025-12-16 16:44:47,568 | INFO     | mean y: 2307227.1421568627
[2025-12-16 18:15:35] 2025-12-16 16:44:47,568 | INFO     | intersect: -19880638691.884987
[2025-12-16 18:15:35] 2025-12-16 16:44:47,568 | INFO     | chi2: 1.2952069116010703
[2025-12-16 18:15:35] 2025-12-16 16:44:47,569 | INFO     | current chi2=1.2952069116010703 (change=-0.03402806566959387 %)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,569 | INFO     | right removable region: 203
[2025-12-16 18:15:35] 2025-12-16 16:44:47,569 | INFO     | sum of square deviations: 2830787960.0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,572 | INFO     | sum of deviations: -6866025556.000001
[2025-12-16 18:15:35] 2025-12-16 16:44:47,572 | INFO     | mean x: 1765897112.0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,572 | INFO     | mean y: 2317933.612440191
[2025-12-16 18:15:35] 2025-12-16 16:44:47,572 | INFO     | intersect: 4285469788.0023384
[2025-12-16 18:15:35] 2025-12-16 16:44:47,573 | INFO     | chi2: 0.6958873906685898
[2025-12-16 18:15:35] 2025-12-16 16:44:47,573 | INFO     | current chi2=0.6958873906685898 (change=64.58950469356711 %)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,574 | INFO     | sum of square deviations: 2632440055.0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,576 | INFO     | sum of deviations: -5613343586.0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,576 | INFO     | mean x: 1765897264.5
[2025-12-16 18:15:35] 2025-12-16 16:44:47,576 | INFO     | mean y: 2316996.3333333335
[2025-12-16 18:15:35] 2025-12-16 16:44:47,576 | INFO     | intersect: 3767868300.8685546
[2025-12-16 18:15:35] 2025-12-16 16:44:47,577 | INFO     | chi2: 0.6867302474004844
[2025-12-16 18:15:35] 2025-12-16 16:44:47,577 | INFO     | current chi2=0.6867302474004844 (change=1.3158944091956493 %)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,577 | INFO     | left removable region: 20
[2025-12-16 18:15:35] 2025-12-16 16:44:47,578 | INFO     | sum of square deviations: 1900284932.0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,580 | INFO     | sum of deviations: 4098855471.9999995
[2025-12-16 18:15:35] 2025-12-16 16:44:47,580 | INFO     | mean x: 1765897234.0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,580 | INFO     | mean y: 2327705.174863388
[2025-12-16 18:15:35] 2025-12-16 16:44:47,580 | INFO     | intersect: -3806657683.638694
[2025-12-16 18:15:35] 2025-12-16 16:44:47,581 | INFO     | chi2: 0.0006496439420099068
[2025-12-16 18:15:35] 2025-12-16 16:44:47,581 | INFO     | current memory leak: 2.16 B/s (using 183 data points, chi2=0.00)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,582 | INFO     | could have reported an average CPU frequency of 2522 MHz (11 samples)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,582 | INFO     | ..............................
[2025-12-16 18:15:35] 2025-12-16 16:44:47,582 | INFO     | . Timing measurements:
[2025-12-16 18:15:35] 2025-12-16 16:44:47,582 | INFO     | . get job = 0 s
[2025-12-16 18:15:35] 2025-12-16 16:44:47,582 | INFO     | . initial setup = 1 s
[2025-12-16 18:15:35] 2025-12-16 16:44:47,583 | INFO     | . payload setup = 6 s
[2025-12-16 18:15:35] 2025-12-16 16:44:47,583 | INFO     | . stage-in = 0 s
[2025-12-16 18:15:35] 2025-12-16 16:44:47,583 | INFO     | . payload execution = 13016 s
[2025-12-16 18:15:35] 2025-12-16 16:44:47,583 | INFO     | . stage-out = 1 s
[2025-12-16 18:15:35] 2025-12-16 16:44:47,583 | INFO     | . log creation = 0 s
[2025-12-16 18:15:35] 2025-12-16 16:44:47,583 | INFO     | ..............................
[2025-12-16 18:15:35] 2025-12-16 16:44:47,739 | INFO     | 
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | job summary report
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | --------------------------------------------------
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | PanDA job id: 6928901375
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | task id: 47886933
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | errors: (none)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | pilot state: finished 
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | transexitcode: 0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | exeerrorcode: 0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | exeerrordiag: 
[2025-12-16 18:15:35] 2025-12-16 16:44:47,740 | INFO     | exitcode: 0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | exitmsg: OK
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | cpuconsumptiontime: 48878 s
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | nevents: 400
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | neventsw: 0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | pid: 2276048
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | pgrp: 2276048
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | corecount: 4
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | event service: False
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | sizes: {0: 2283854, 1: 2283996, 6: 2284258, 11: 2284286, 13026: 2314402, 13027: 2323422, 13030: 2323606, 13037: 2323800}
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | --------------------------------------------------
[2025-12-16 18:15:35] 2025-12-16 16:44:47,741 | INFO     | 
[2025-12-16 18:15:35] 2025-12-16 16:44:47,742 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-12-16 18:15:35] 2025-12-16 16:44:47,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,764 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,764 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,765 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,765 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,766 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,766 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,766 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,766 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,766 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 18:15:35] 2025-12-16 16:44:47,766 | INFO     | job 6928901375 has completed (purged errors)
[2025-12-16 18:15:35] 2025-12-16 16:44:47,766 | INFO     | overall cleanup function is called
[2025-12-16 18:15:35] 2025-12-16 16:44:48,775 | INFO     | --- collectZombieJob: --- 10, [2276048]
[2025-12-16 18:15:35] 2025-12-16 16:44:48,775 | INFO     | zombie collector waiting for pid 2276048
[2025-12-16 18:15:35] 2025-12-16 16:44:48,775 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 18:15:35] 2025-12-16 16:44:48,775 | INFO     | collected zombie processes
[2025-12-16 18:15:35] 2025-12-16 16:44:48,775 | INFO     | will attempt to kill all subprocesses of pid=2276048
[2025-12-16 18:15:35] 2025-12-16 16:44:49,191 | INFO     | process IDs to be killed: [2276048] (in reverse order)
[2025-12-16 18:15:35] 2025-12-16 16:44:49,352 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 18:15:35] 2025-12-16 16:44:49,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 18:15:35] 2025-12-16 16:44:49,369 | INFO     | did not find any defunct processes belonging to 2276048
[2025-12-16 18:15:35] 2025-12-16 16:44:49,390 | INFO     | did not find any defunct processes belonging to 2276048
[2025-12-16 18:15:35] 2025-12-16 16:44:49,390 | INFO     | ready for new job
[2025-12-16 18:15:35] 2025-12-16 16:44:49,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 18:15:35] 2025-12-16 16:44:49,395 | INFO     | ***************************************
[2025-12-16 18:15:35] 2025-12-16 16:44:49,395 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 18:15:35] 2025-12-16 16:44:49,395 | INFO     | ***************************************
[2025-12-16 18:15:35] 2025-12-16 16:44:49,395 | INFO     | 
[2025-12-16 18:15:35] 2025-12-16 16:44:49,402 | INFO     | architecture information:
[2025-12-16 18:15:35] 2025-12-16 16:44:49,402 | INFO     | executing command: cat /etc/os-release
[2025-12-16 18:15:35] 2025-12-16 16:44:49,422 | INFO     | cat /etc/os-release:
[2025-12-16 18:15:35] NAME="CentOS Linux"
[2025-12-16 18:15:35] VERSION="7 (Core)"
[2025-12-16 18:15:35] ID="centos"
[2025-12-16 18:15:35] ID_LIKE="rhel fedora"
[2025-12-16 18:15:35] VERSION_ID="7"
[2025-12-16 18:15:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 18:15:35] ANSI_COLOR="0;31"
[2025-12-16 18:15:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 18:15:35] HOME_URL="https://www.centos.org/"
[2025-12-16 18:15:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 18:15:35] 
[2025-12-16 18:15:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 18:15:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 18:15:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 18:15:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 18:15:35] 
[2025-12-16 18:15:35] 2025-12-16 16:44:49,423 | INFO     | ***************************************
[2025-12-16 18:15:35] 2025-12-16 16:44:49,926 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-12-16 18:15:35] 2025-12-16 16:44:49,948 | INFO     | sufficient remaining disk space (676118659072 B)
[2025-12-16 18:15:35] 2025-12-16 16:44:49,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 18:15:35] 2025-12-16 16:44:49,949 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 18:15:35] 2025-12-16 16:44:49,949 | INFO     | update_server=False
[2025-12-16 18:15:35] 2025-12-16 16:44:49,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 18:15:35] 2025-12-16 16:44:49,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 18:15:35] 2025-12-16 16:44:49,993 | INFO     | aborting loop
[2025-12-16 18:15:35] 2025-12-16 16:44:50,022 | INFO     | all data control threads have been joined
[2025-12-16 18:15:35] 2025-12-16 16:44:50,267 | INFO     | all job control threads have been joined
[2025-12-16 18:15:35] 2025-12-16 16:44:50,952 | INFO     | [job] retrieve thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:50,998 | INFO     | [job] job monitor thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:51,028 | INFO     | [data] control thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:51,273 | INFO     | [job] control thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:51,338 | INFO     | all payload control threads have been joined
[2025-12-16 18:15:35] 2025-12-16 16:44:51,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 18:15:35] 2025-12-16 16:44:51,405 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:51,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 18:15:35] 2025-12-16 16:44:51,655 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:51,714 | INFO     | [payload] failed_post thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:51,917 | INFO     | [data] copytool_in thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:52,054 | INFO     | [job] validate thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:52,344 | INFO     | [payload] control thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:52,345 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:52,391 | INFO     | [payload] validate_post thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:52,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 18:15:35] 2025-12-16 16:44:53,362 | INFO     | [data] copytool_out thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:53,739 | INFO     | [job] queue monitor thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:44:55,440 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:45:00,573 | INFO     | job.realtimelogging is not enabled
[2025-12-16 18:15:35] 2025-12-16 16:45:01,578 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 18:15:35] 2025-12-16 16:45:21,004 | INFO     | PID=2268566 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 18:15:35] 2025-12-16 16:45:21,004 | INFO     | .. there are 5 such processes running
[2025-12-16 18:15:35] 2025-12-16 16:45:21,004 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 18:15:35] 2025-12-16 16:45:21,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 18:15:35] 2025-12-16 16:45:21,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 18:15:35] 2025-12-16 16:45:35,065 | INFO     | [monitor] cgroup control has ended
[2025-12-16 18:15:35] 2025-12-16 16:45:35,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22711693952832)>', '<ExcThread(monitor, started 22710845433600)>']
[2025-12-16 18:15:35] 2025-12-16 16:45:36,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 18:15:35] 2025-12-16 16:45:36,075 | INFO     | [monitor] control thread has ended
[2025-12-16 18:15:35] 2025-12-16 16:45:40,564 | INFO     | all workflow threads have been joined
[2025-12-16 18:15:35] 2025-12-16 16:45:40,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 18:15:35] 2025-12-16 16:45:40,565 | INFO     | traces error code: 0
[2025-12-16 18:15:35] 2025-12-16 16:45:40,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 18:15:35] 2025-12-16 16:45:40,745 [wrapper] ==== pilot stdout END ====
[2025-12-16 18:15:35] 2025-12-16 16:45:40,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 18:15:35] 2025-12-16 16:45:40,752 [wrapper] pilotpid: 2268566
[2025-12-16 18:15:35] 2025-12-16 16:45:40,756 [wrapper] Pilot exit status: 0
[2025-12-16 18:15:35] 2025-12-16 16:45:40,768 [wrapper] pandaids: 6928901375
[2025-12-16 18:15:35] 2025-12-16 16:45:40,852 [wrapper] cleanup supervisor_pilot 2487655 2268567
[2025-12-16 18:15:35] 2025-12-16 16:45:40,856 [wrapper] Test setup, not cleaning
[2025-12-16 18:15:35] 2025-12-16 16:45:40,859 [wrapper] apfmon messages muted
[2025-12-16 18:15:35] 2025-12-16 16:45:40,862 [wrapper] ==== wrapper stdout END ====
[2025-12-16 18:15:35] 2025-12-16 16:45:40,866 [wrapper] ==== wrapper stderr END ====
[2025-12-16 18:15:35]  *** Error codes and diagnostics ***
[2025-12-16 18:15:35]     "exeErrorCode": 0,
[2025-12-16 18:15:35]     "exeErrorDiag": "",
[2025-12-16 18:15:35]     "pilotErrorCode": 0,
[2025-12-16 18:15:35]     "pilotErrorDiag": "",
[2025-12-16 18:15:35]  *** Listing of results directory ***
[2025-12-16 18:15:35] total 344364
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc    579449 Dec 13 04:44 pilot3.tar.gz
[2025-12-16 18:15:35] -rwx------ 1 boinc boinc     36322 Dec 13 04:47 runpilot2-wrapper.sh
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc      5112 Dec 13 04:47 queuedata.json
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc       100 Dec 16 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 18:15:35] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 14:06 run_atlas
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc       105 Dec 16 14:06 job.xml
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc      6638 Dec 16 14:07 init_data.xml
[2025-12-16 18:15:35] -rw-r--r-- 2 boinc boinc 192643764 Dec 16 14:07 EVNT.47886929._000010.pool.root.1
[2025-12-16 18:15:35] -rw-r--r-- 2 boinc boinc     15847 Dec 16 14:07 start_atlas.sh
[2025-12-16 18:15:35] drwxrwx--x 2 boinc boinc      4096 Dec 16 14:07 shared
[2025-12-16 18:15:35] -rw-r--r-- 2 boinc boinc    592389 Dec 16 14:07 input.tar.gz
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc         0 Dec 16 14:07 boinc_lockfile
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc      2509 Dec 16 14:07 pandaJob.out
[2025-12-16 18:15:35] -rw------- 1 boinc boinc    990993 Dec 16 14:07 agis_schedconf.cvmfs.json
[2025-12-16 18:15:35] drwx------ 5 boinc boinc      4096 Dec 16 14:07 pilot3
[2025-12-16 18:15:35] -rw------- 1 boinc boinc 151645211 Dec 16 17:44 HITS.47886933._000230.pool.root.1
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc       527 Dec 16 17:44 boinc_task_state.xml
[2025-12-16 18:15:35] -rw------- 1 boinc boinc        95 Dec 16 17:44 pilot_heartbeat.json
[2025-12-16 18:15:35] -rw------- 1 boinc boinc      1030 Dec 16 17:44 memory_monitor_summary.json
[2025-12-16 18:15:35] -rw------- 1 boinc boinc   1516240 Dec 16 17:44 agis_ddmendpoints.agis.ALL.json
[2025-12-16 18:15:35] -rw------- 1 boinc boinc    378871 Dec 16 17:44 log.47886933._000230.job.log.tgz.1
[2025-12-16 18:15:35] -rw------- 1 boinc boinc      7814 Dec 16 17:44 heartbeat.json
[2025-12-16 18:15:35] -rw------- 1 boinc boinc      4905 Dec 16 17:45 pilotlog.txt
[2025-12-16 18:15:35] -rw------- 1 boinc boinc   1834618 Dec 16 17:45 log.47886933._000230.job.log.1
[2025-12-16 18:15:35] -rw------- 1 boinc boinc       357 Dec 16 17:45 output.list
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc       620 Dec 16 17:45 runtime_log
[2025-12-16 18:15:35] -rw------- 1 boinc boinc   2232320 Dec 16 17:45 result.tar.gz
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc      9206 Dec 16 17:45 runtime_log.err
[2025-12-16 18:15:35] -rw------- 1 boinc boinc       665 Dec 16 17:45 mRQMDmTmVo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgSRKDmUfPFJn.diag
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc        27 Dec 16 18:15 wrapper_checkpoint.txt
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc      8192 Dec 16 18:15 boinc_mmap_file
[2025-12-16 18:15:35] -rw-r--r-- 1 boinc boinc     20868 Dec 16 18:15 stderr.txt
[2025-12-16 18:15:35] HITS file was successfully produced:
[2025-12-16 18:15:35] -rw------- 1 boinc boinc 151645211 Dec 16 17:44 shared/HITS.pool.root.1
[2025-12-16 18:15:35]  *** Contents of shared directory: ***
[2025-12-16 18:15:35] total 339008
[2025-12-16 18:15:35] -rw-r--r-- 2 boinc boinc 192643764 Dec 16 14:07 ATLAS.root_0
[2025-12-16 18:15:35] -rw-r--r-- 2 boinc boinc     15847 Dec 16 14:07 start_atlas.sh
[2025-12-16 18:15:35] -rw-r--r-- 2 boinc boinc    592389 Dec 16 14:07 input.tar.gz
[2025-12-16 18:15:35] -rw------- 1 boinc boinc 151645211 Dec 16 17:44 HITS.pool.root.1
[2025-12-16 18:15:35] -rw------- 1 boinc boinc   2232320 Dec 16 17:45 result.tar.gz
18:15:37 (2260439): run_atlas exited; CPU time 49483.799829
18:15:37 (2260439): called boinc_finish(0)

</stderr_txt>
]]>

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