Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:35:42 (1577082): wrapper (7.7.26015): starting
00:35:42 (1577082): wrapper: running run_atlas (--nthreads 2)
[2025-12-16 00:35:42] Arguments: --nthreads 2
[2025-12-16 00:35:42] Threads: 2
[2025-12-16 00:35:42] Checking for CVMFS
[2025-12-16 00:35:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 00:35:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 00:35:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 00:35:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 00:35:42] 2.9.2.0 925053 3378 64356 154051 0 56 35340860 36864000 0 130560 0 1742393 99.986 123124 19340 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 00:35:42] CVMFS is ok
[2025-12-16 00:35:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 00:35:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 00:35:42] Further information can be found at the LHC@home message board.
[2025-12-16 00:35:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 00:35:42] Checking for apptainer binary...
[2025-12-16 00:35:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 00:35:42] Running /usr/bin/apptainer --version
[2025-12-16 00:35:42] apptainer version 1.4.1-1.1
[2025-12-16 00:35:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 00:35:42] atlasA219
[2025-12-16 00:35:42] apptainer works
[2025-12-16 00:35:42] Set ATHENA_PROC_NUMBER=2
[2025-12-16 00:35:42] Set ATHENA_CORE_NUMBER=2
[2025-12-16 00:35:42] Starting ATLAS job with PandaID=6929721961
[2025-12-16 00:35:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 03:33:29]  *** The last 200 lines of the pilot log: ***
[2025-12-16 03:33:29] 2025-12-16 02:32:58,350 | INFO     | executing command: cat /etc/os-release
[2025-12-16 03:33:29] 2025-12-16 02:32:58,359 | INFO     | cat /etc/os-release:
[2025-12-16 03:33:29] NAME="CentOS Linux"
[2025-12-16 03:33:29] VERSION="7 (Core)"
[2025-12-16 03:33:29] ID="centos"
[2025-12-16 03:33:29] ID_LIKE="rhel fedora"
[2025-12-16 03:33:29] VERSION_ID="7"
[2025-12-16 03:33:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 03:33:29] ANSI_COLOR="0;31"
[2025-12-16 03:33:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 03:33:29] HOME_URL="https://www.centos.org/"
[2025-12-16 03:33:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 03:33:29] 
[2025-12-16 03:33:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 03:33:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 03:33:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 03:33:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 03:33:29] 
[2025-12-16 03:33:29] 2025-12-16 02:32:58,359 | INFO     | ***************************************
[2025-12-16 03:33:29] 2025-12-16 02:32:58,863 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-16 03:33:29] 2025-12-16 02:32:58,876 | INFO     | sufficient remaining disk space (174749384704 B)
[2025-12-16 03:33:29] 2025-12-16 02:32:58,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 03:33:29] 2025-12-16 02:32:58,876 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 03:33:29] 2025-12-16 02:32:58,876 | INFO     | update_server=False
[2025-12-16 03:33:29] 2025-12-16 02:32:58,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 03:33:29] 2025-12-16 02:32:58,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:33:29] 2025-12-16 02:32:58,878 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 03:33:29] 2025-12-16 02:32:58,878 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 03:33:29] 2025-12-16 02:32:58,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:33:29] 2025-12-16 02:32:58,878 | INFO     | will abort loop
[2025-12-16 03:33:29] 2025-12-16 02:32:59,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 03:33:29] 2025-12-16 02:32:59,163 | INFO     | all data control threads have been joined
[2025-12-16 03:33:29] 2025-12-16 02:32:59,798 | INFO     | all job control threads have been joined
[2025-12-16 03:33:29] 2025-12-16 02:32:59,882 | INFO     | [job] queue monitor thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:32:59,883 | INFO     | [job] job monitor thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:32:59,883 | INFO     | [job] retrieve thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:32:59,911 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:00,169 | INFO     | [data] control thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:00,194 | INFO     | all payload control threads have been joined
[2025-12-16 03:33:29] 2025-12-16 02:33:00,366 | INFO     | [payload] failed_post thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:00,382 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:00,804 | INFO     | [job] control thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:00,866 | INFO     | [data] copytool_in thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:01,059 | INFO     | [data] copytool_out thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:01,200 | INFO     | [payload] control thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:01,308 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:01,308 | INFO     | [job] validate thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:01,409 | INFO     | [payload] validate_post thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:02,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 03:33:29] 2025-12-16 02:33:06,030 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:09,400 | INFO     | job.realtimelogging is not enabled
[2025-12-16 03:33:29] 2025-12-16 02:33:10,406 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 03:33:29] 2025-12-16 02:33:10,599 | INFO     | [monitor] cgroup control has ended
[2025-12-16 03:33:29] 2025-12-16 02:33:11,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837564536640)>', '<ExcThread(monitor, started 139836904150784)>']
[2025-12-16 03:33:29] 2025-12-16 02:33:16,535 | INFO     | all workflow threads have been joined
[2025-12-16 03:33:29] 2025-12-16 02:33:16,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 03:33:29] 2025-12-16 02:33:16,536 | INFO     | traces error code: 0
[2025-12-16 03:33:29] 2025-12-16 02:33:16,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 03:33:29] 2025-12-16 02:33:29,466 | INFO     | PID=1580796 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 03:33:29] 2025-12-16 02:33:29,467 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 03:33:29] 2025-12-16 02:33:29,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 03:33:29] 2025-12-16 02:33:29,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 03:33:29] 2025-12-16 02:33:29,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 03:33:29] 2025-12-16 02:33:29,467 | INFO     | [monitor] control thread has ended
[2025-12-16 03:33:29] 2025-12-16 02:33:29,507 [wrapper] ==== pilot stdout END ====
[2025-12-16 03:33:29] 2025-12-16 02:33:29,510 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 03:33:29] 2025-12-16 02:33:29,512 [wrapper] pilotpid: 1580796
[2025-12-16 03:33:29] 2025-12-16 02:33:29,514 [wrapper] Pilot exit status: 0
[2025-12-16 03:33:29] 2025-12-16 02:33:29,520 [wrapper] pandaids: 6929721961
[2025-12-16 03:33:29] 2025-12-16 02:33:29,534 [wrapper] cleanup supervisor_pilot 1606416 1580797
[2025-12-16 03:33:29] 2025-12-16 02:33:29,536 [wrapper] Test setup, not cleaning
[2025-12-16 03:33:29] 2025-12-16 02:33:29,538 [wrapper] apfmon messages muted
[2025-12-16 03:33:29] 2025-12-16 02:33:29,540 [wrapper] ==== wrapper stdout END ====
[2025-12-16 03:33:29] 2025-12-16 02:33:29,542 [wrapper] ==== wrapper stderr END ====
[2025-12-16 03:33:29]  *** Error codes and diagnostics ***
[2025-12-16 03:33:29]     "exeErrorCode": 0,
[2025-12-16 03:33:29]     "exeErrorDiag": "",
[2025-12-16 03:33:29]     "pilotErrorCode": 0,
[2025-12-16 03:33:29]     "pilotErrorDiag": "",
[2025-12-16 03:33:29]  *** Listing of results directory ***
[2025-12-16 03:33:29] total 443244
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc    579449 Dec 15 11:33 pilot3.tar.gz
[2025-12-16 03:33:29] -rwx------ 1 boinc boinc     36322 Dec 15 11:34 runpilot2-wrapper.sh
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc      5112 Dec 15 11:35 queuedata.json
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc       100 Dec 16 00:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 03:33:29] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 00:35 run_atlas
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc       105 Dec 16 00:35 job.xml
[2025-12-16 03:33:29] -rw-r--r-- 2 boinc boinc 223117751 Dec 16 00:35 EVNT.47898761._000641.pool.root.1
[2025-12-16 03:33:29] -rw-r--r-- 2 boinc boinc    592398 Dec 16 00:35 input.tar.gz
[2025-12-16 03:33:29] -rw-r--r-- 2 boinc boinc     15847 Dec 16 00:35 start_atlas.sh
[2025-12-16 03:33:29] drwxrwx--x 2 boinc boinc      4096 Dec 16 00:35 shared
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc         0 Dec 16 00:35 boinc_setup_complete
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc      6208 Dec 16 00:35 init_data.xml
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc         0 Dec 16 00:35 boinc_lockfile
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc      2508 Dec 16 00:35 pandaJob.out
[2025-12-16 03:33:29] -rw------- 1 boinc boinc    994555 Dec 16 00:35 agis_schedconf.cvmfs.json
[2025-12-16 03:33:29] -rw------- 1 boinc boinc   1516240 Dec 16 00:35 agis_ddmendpoints.agis.ALL.json
[2025-12-16 03:33:29] drwx------ 5 boinc boinc      4096 Dec 16 00:35 pilot3
[2025-12-16 03:33:29] -rw------- 1 boinc boinc 223210731 Dec 16 03:32 HITS.47898763._016047.pool.root.1
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc       531 Dec 16 03:32 boinc_task_state.xml
[2025-12-16 03:33:29] -rw------- 1 boinc boinc      1017 Dec 16 03:32 memory_monitor_summary.json
[2025-12-16 03:33:29] -rw------- 1 boinc boinc    324647 Dec 16 03:32 log.47898763._016047.job.log.tgz.1
[2025-12-16 03:33:29] -rw------- 1 boinc boinc        95 Dec 16 03:32 pilot_heartbeat.json
[2025-12-16 03:33:29] -rw------- 1 boinc boinc      7762 Dec 16 03:32 heartbeat.json
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc      8192 Dec 16 03:33 boinc_mmap_file
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc        28 Dec 16 03:33 wrapper_checkpoint.txt
[2025-12-16 03:33:29] -rw------- 1 boinc boinc       747 Dec 16 03:33 pilotlog.txt
[2025-12-16 03:33:29] -rw------- 1 boinc boinc   1500151 Dec 16 03:33 log.47898763._016047.job.log.1
[2025-12-16 03:33:29] -rw------- 1 boinc boinc       357 Dec 16 03:33 output.list
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc       620 Dec 16 03:33 runtime_log
[2025-12-16 03:33:29] -rw------- 1 boinc boinc   1843200 Dec 16 03:33 result.tar.gz
[2025-12-16 03:33:29] -rw------- 1 boinc boinc       665 Dec 16 03:33 zKPLDmf5Kp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDqXKDmvAW4ym.diag
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc      8913 Dec 16 03:33 runtime_log.err
[2025-12-16 03:33:29] -rw-r--r-- 1 boinc boinc      9212 Dec 16 03:33 stderr.txt
[2025-12-16 03:33:29] HITS file was successfully produced:
[2025-12-16 03:33:29] -rw------- 1 boinc boinc 223210731 Dec 16 03:32 shared/HITS.pool.root.1
[2025-12-16 03:33:29]  *** Contents of shared directory: ***
[2025-12-16 03:33:29] total 438276
[2025-12-16 03:33:29] -rw-r--r-- 2 boinc boinc 223117751 Dec 16 00:35 ATLAS.root_0
[2025-12-16 03:33:29] -rw-r--r-- 2 boinc boinc    592398 Dec 16 00:35 input.tar.gz
[2025-12-16 03:33:29] -rw-r--r-- 2 boinc boinc     15847 Dec 16 00:35 start_atlas.sh
[2025-12-16 03:33:29] -rw------- 1 boinc boinc 223210731 Dec 16 03:32 HITS.pool.root.1
[2025-12-16 03:33:29] -rw------- 1 boinc boinc   1843200 Dec 16 03:33 result.tar.gz
03:33:30 (1577082): run_atlas exited; CPU time 20815.536590
03:33:30 (1577082): called boinc_finish(0)

</stderr_txt>
]]>

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