Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:21:09 (1797): wrapper (7.7.26015): starting
10:21:09 (1797): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 10:21:09] Arguments: --nthreads 12
[2025-12-15 10:21:09] Threads: 12
[2025-12-15 10:21:09] Checking for CVMFS
[2025-12-15 10:21:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 10:21:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 10:21:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 10:21:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 10:21:10] 2.11.2.0 22587 29757 91252 154037 1 56 13665215 20275200 1 130560 0 10874586 99.905 1891000 41325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 10:21:10] CVMFS is ok
[2025-12-15 10:21:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 10:21:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 10:21:10] Further information can be found at the LHC@home message board.
[2025-12-15 10:21:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 10:21:10] Checking for apptainer binary...
[2025-12-15 10:21:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 10:21:10] Running /usr/bin/apptainer --version
[2025-12-15 10:21:10] apptainer version 1.3.2-1.el7
[2025-12-15 10:21:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 10:21:11] c-205-13.aglt2.org
[2025-12-15 10:21:11] apptainer works
[2025-12-15 10:21:11] Set ATHENA_PROC_NUMBER=12
[2025-12-15 10:21:11] Set ATHENA_CORE_NUMBER=12
[2025-12-15 10:21:11] Starting ATLAS job with PandaID=6929524698
[2025-12-15 10:21:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 12:03:44]  *** The last 200 lines of the pilot log: ***
[2025-12-15 12:03:44] 2025-12-15 17:03:11,313 | INFO     | time since job start (6105s) is within the limit (174528.0s)
[2025-12-15 12:03:44] 2025-12-15 17:03:11,608 | INFO     | monitor loop #453: job 0:6929524698 is in state 'finished'
[2025-12-15 12:03:44] 2025-12-15 17:03:11,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,350 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 12:03:44] 2025-12-15 17:03:12,354 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-15 12:03:44] 2025-12-15 17:03:12,357 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929524698/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,358 | INFO     | extracted standard info from prmon json
[2025-12-15 12:03:44] 2025-12-15 17:03:12,359 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 12:03:44] 2025-12-15 17:03:12,359 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 12:03:44] 2025-12-15 17:03:12,360 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 12:03:44] 2025-12-15 17:03:12,360 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 12:03:44] 2025-12-15 17:03:12,362 | INFO     | fitting pss+swap vs Time
[2025-12-15 12:03:44] 2025-12-15 17:03:12,362 | INFO     | sum of square deviations: 310052325.0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,362 | INFO     | sum of deviations: -6442354630.999999
[2025-12-15 12:03:44] 2025-12-15 17:03:12,363 | INFO     | mean x: 1765815134.5
[2025-12-15 12:03:44] 2025-12-15 17:03:12,363 | INFO     | mean y: 2732853.34
[2025-12-15 12:03:44] 2025-12-15 17:03:12,363 | INFO     | intersect: 36693337606.057014
[2025-12-15 12:03:44] 2025-12-15 17:03:12,363 | INFO     | chi2: 2.522291280992382
[2025-12-15 12:03:44] 2025-12-15 17:03:12,363 | INFO     | sum of square deviations: 265828240.0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,364 | INFO     | sum of deviations: 2269329685.9999976
[2025-12-15 12:03:44] 2025-12-15 17:03:12,364 | INFO     | mean x: 1765814982.0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,364 | INFO     | mean y: 2761852.094736842
[2025-12-15 12:03:44] 2025-12-15 17:03:12,364 | INFO     | intersect: -15071695092.871502
[2025-12-15 12:03:44] 2025-12-15 17:03:12,364 | INFO     | chi2: 1.6515660917017678
[2025-12-15 12:03:44] 2025-12-15 17:03:12,365 | INFO     | current chi2=1.6515660917017678 (change=34.52119887390769 %)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,365 | INFO     | sum of square deviations: 226022842.5
[2025-12-15 12:03:44] 2025-12-15 17:03:12,365 | INFO     | sum of deviations: 3325989955.500001
[2025-12-15 12:03:44] 2025-12-15 17:03:12,365 | INFO     | mean x: 1765814829.5
[2025-12-15 12:03:44] 2025-12-15 17:03:12,365 | INFO     | mean y: 2765903.677777778
[2025-12-15 12:03:44] 2025-12-15 17:03:12,366 | INFO     | intersect: -25981697972.755184
[2025-12-15 12:03:44] 2025-12-15 17:03:12,366 | INFO     | chi2: 1.654227346055514
[2025-12-15 12:03:44] 2025-12-15 17:03:12,366 | INFO     | current chi2=1.654227346055514 (change=-0.1611352017407879 %)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,366 | INFO     | right removable region: 89
[2025-12-15 12:03:44] 2025-12-15 17:03:12,366 | INFO     | sum of square deviations: 265828240.0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,367 | INFO     | sum of deviations: -23350099719.999996
[2025-12-15 12:03:44] 2025-12-15 17:03:12,367 | INFO     | mean x: 1765815287.0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,367 | INFO     | mean y: 2789986.494736842
[2025-12-15 12:03:44] 2025-12-15 17:03:12,367 | INFO     | intersect: 155110324981.83765
[2025-12-15 12:03:44] 2025-12-15 17:03:12,367 | INFO     | chi2: 1.0256199911208987
[2025-12-15 12:03:44] 2025-12-15 17:03:12,367 | INFO     | current chi2=1.0256199911208987 (change=59.33776567164066 %)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,367 | INFO     | sum of square deviations: 226022842.5
[2025-12-15 12:03:44] 2025-12-15 17:03:12,368 | INFO     | sum of deviations: -23444464402.0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,368 | INFO     | mean x: 1765815439.5
[2025-12-15 12:03:44] 2025-12-15 17:03:12,368 | INFO     | mean y: 2790111.311111111
[2025-12-15 12:03:44] 2025-12-15 17:03:12,368 | INFO     | intersect: 183163911146.49908
[2025-12-15 12:03:44] 2025-12-15 17:03:12,368 | INFO     | chi2: 0.9823143125129769
[2025-12-15 12:03:44] 2025-12-15 17:03:12,369 | INFO     | current chi2=0.9823143125129769 (change=4.222390259826466 %)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,369 | INFO     | left removable region: 20
[2025-12-15 12:03:44] 2025-12-15 17:03:12,369 | INFO     | sum of square deviations: 101843770.0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,369 | INFO     | sum of deviations: -10077966525.999998
[2025-12-15 12:03:44] 2025-12-15 17:03:12,369 | INFO     | mean x: 1765815409.0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,369 | INFO     | mean y: 2820667.217391304
[2025-12-15 12:03:44] 2025-12-15 17:03:12,370 | INFO     | intersect: 174739366486.33813
[2025-12-15 12:03:44] 2025-12-15 17:03:12,370 | INFO     | chi2: 0.04740425351087082
[2025-12-15 12:03:44] 2025-12-15 17:03:12,370 | INFO     | current memory leak: -98.96 B/s (using 69 data points, chi2=0.05)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,370 | INFO     | could have reported an average CPU frequency of 2123 MHz (7 samples)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,370 | INFO     | ..............................
[2025-12-15 12:03:44] 2025-12-15 17:03:12,370 | INFO     | . Timing measurements:
[2025-12-15 12:03:44] 2025-12-15 17:03:12,371 | INFO     | . get job = 0 s
[2025-12-15 12:03:44] 2025-12-15 17:03:12,371 | INFO     | . initial setup = 2 s
[2025-12-15 12:03:44] 2025-12-15 17:03:12,371 | INFO     | . payload setup = 7 s
[2025-12-15 12:03:44] 2025-12-15 17:03:12,371 | INFO     | . stage-in = 0 s
[2025-12-15 12:03:44] 2025-12-15 17:03:12,371 | INFO     | . payload execution = 6069 s
[2025-12-15 12:03:44] 2025-12-15 17:03:12,371 | INFO     | . stage-out = 0 s
[2025-12-15 12:03:44] 2025-12-15 17:03:12,371 | INFO     | . log creation = 0 s
[2025-12-15 12:03:44] 2025-12-15 17:03:12,371 | INFO     | ..............................
[2025-12-15 12:03:44] 2025-12-15 17:03:12,456 | INFO     | 
[2025-12-15 12:03:44] 2025-12-15 17:03:12,456 | INFO     | job summary report
[2025-12-15 12:03:44] 2025-12-15 17:03:12,457 | INFO     | --------------------------------------------------
[2025-12-15 12:03:44] 2025-12-15 17:03:12,457 | INFO     | PanDA job id: 6929524698
[2025-12-15 12:03:44] 2025-12-15 17:03:12,457 | INFO     | task id: 47898763
[2025-12-15 12:03:44] 2025-12-15 17:03:12,457 | INFO     | errors: (none)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 12:03:44] 2025-12-15 17:03:12,457 | INFO     | pilot state: finished 
[2025-12-15 12:03:44] 2025-12-15 17:03:12,458 | INFO     | transexitcode: 0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,458 | INFO     | exeerrorcode: 0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,458 | INFO     | exeerrordiag: 
[2025-12-15 12:03:44] 2025-12-15 17:03:12,458 | INFO     | exitcode: 0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,458 | INFO     | exitmsg: OK
[2025-12-15 12:03:44] 2025-12-15 17:03:12,458 | INFO     | cpuconsumptiontime: 67112 s
[2025-12-15 12:03:44] 2025-12-15 17:03:12,458 | INFO     | nevents: 400
[2025-12-15 12:03:44] 2025-12-15 17:03:12,459 | INFO     | neventsw: 0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,459 | INFO     | pid: 11946
[2025-12-15 12:03:44] 2025-12-15 17:03:12,459 | INFO     | pgrp: 11946
[2025-12-15 12:03:44] 2025-12-15 17:03:12,459 | INFO     | corecount: 12
[2025-12-15 12:03:44] 2025-12-15 17:03:12,459 | INFO     | event service: False
[2025-12-15 12:03:44] 2025-12-15 17:03:12,459 | INFO     | sizes: {0: 2283958, 1: 2283958, 5: 2284248, 11: 2284304, 6080: 2311083, 6082: 2320081, 6084: 2320265, 6090: 2320459}
[2025-12-15 12:03:44] 2025-12-15 17:03:12,459 | INFO     | --------------------------------------------------
[2025-12-15 12:03:44] 2025-12-15 17:03:12,460 | INFO     | 
[2025-12-15 12:03:44] 2025-12-15 17:03:12,460 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 12:03:44] 2025-12-15 17:03:12,483 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,484 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,484 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,484 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,487 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,487 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 12:03:44] 2025-12-15 17:03:12,487 | INFO     | job 6929524698 has completed (purged errors)
[2025-12-15 12:03:44] 2025-12-15 17:03:12,487 | INFO     | overall cleanup function is called
[2025-12-15 12:03:44] 2025-12-15 17:03:13,495 | INFO     | --- collectZombieJob: --- 10, [11946]
[2025-12-15 12:03:44] 2025-12-15 17:03:13,496 | INFO     | zombie collector waiting for pid 11946
[2025-12-15 12:03:44] 2025-12-15 17:03:13,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 12:03:44] 2025-12-15 17:03:13,496 | INFO     | collected zombie processes
[2025-12-15 12:03:44] 2025-12-15 17:03:13,496 | INFO     | will attempt to kill all subprocesses of pid=11946
[2025-12-15 12:03:44] 2025-12-15 17:03:13,589 | INFO     | process IDs to be killed: [11946] (in reverse order)
[2025-12-15 12:03:44] 2025-12-15 17:03:13,639 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 12:03:44] 2025-12-15 17:03:13,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 12:03:44] 2025-12-15 17:03:13,643 | INFO     | did not find any defunct processes belonging to 11946
[2025-12-15 12:03:44] 2025-12-15 17:03:13,647 | INFO     | did not find any defunct processes belonging to 11946
[2025-12-15 12:03:44] 2025-12-15 17:03:13,647 | INFO     | ready for new job
[2025-12-15 12:03:44] 2025-12-15 17:03:13,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 12:03:44] 2025-12-15 17:03:13,649 | INFO     | ***************************************
[2025-12-15 12:03:44] 2025-12-15 17:03:13,649 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 12:03:44] 2025-12-15 17:03:13,650 | INFO     | ***************************************
[2025-12-15 12:03:44] 2025-12-15 17:03:13,650 | INFO     | 
[2025-12-15 12:03:44] 2025-12-15 17:03:13,650 | INFO     | architecture information:
[2025-12-15 12:03:44] 2025-12-15 17:03:13,651 | INFO     | executing command: cat /etc/os-release
[2025-12-15 12:03:44] 2025-12-15 17:03:13,665 | INFO     | cat /etc/os-release:
[2025-12-15 12:03:44] NAME="CentOS Linux"
[2025-12-15 12:03:44] VERSION="7 (Core)"
[2025-12-15 12:03:44] ID="centos"
[2025-12-15 12:03:44] ID_LIKE="rhel fedora"
[2025-12-15 12:03:44] VERSION_ID="7"
[2025-12-15 12:03:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 12:03:44] ANSI_COLOR="0;31"
[2025-12-15 12:03:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 12:03:44] HOME_URL="https://www.centos.org/"
[2025-12-15 12:03:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 12:03:44] 
[2025-12-15 12:03:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 12:03:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 12:03:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 12:03:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 12:03:44] 
[2025-12-15 12:03:44] 2025-12-15 17:03:13,665 | INFO     | ***************************************
[2025-12-15 12:03:44] 2025-12-15 17:03:14,168 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 12:03:44] 2025-12-15 17:03:14,185 | INFO     | sufficient remaining disk space (29323427840 B)
[2025-12-15 12:03:44] 2025-12-15 17:03:14,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 12:03:44] 2025-12-15 17:03:14,186 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 12:03:44] 2025-12-15 17:03:14,186 | INFO     | update_server=False
[2025-12-15 12:03:44] 2025-12-15 17:03:14,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 12:03:44] 2025-12-15 17:03:14,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 12:03:44] 2025-12-15 17:03:14,212 | INFO     | all payload control threads have been joined
[2025-12-15 12:03:44] 2025-12-15 17:03:14,665 | INFO     | all job control threads have been joined
[2025-12-15 12:03:44] 2025-12-15 17:03:14,724 | INFO     | all data control threads have been joined
[2025-12-15 12:03:44] 2025-12-15 17:03:15,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 12:03:44] 2025-12-15 17:03:15,117 | INFO     | aborting loop
[2025-12-15 12:03:44] 2025-12-15 17:03:15,190 | INFO     | [job] retrieve thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:15,192 | INFO     | [job] queue monitor thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:15,217 | INFO     | [payload] control thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:15,363 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:15,407 | INFO     | [payload] validate_post thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:15,670 | INFO     | [job] control thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:15,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 12:03:44] 2025-12-15 17:03:15,697 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:15,729 | INFO     | [data] control thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:15,963 | INFO     | [job] validate thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:16,122 | INFO     | [job] job monitor thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:16,352 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:16,408 | INFO     | [payload] failed_post thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:16,565 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:16,594 | INFO     | [data] copytool_in thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:17,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 12:03:44] 2025-12-15 17:03:17,680 | INFO     | [data] copytool_out thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:21,026 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 12:03:44] 2025-12-15 17:03:35,808 | INFO     | [monitor] cgroup control has ended
[2025-12-15 12:03:44] 2025-12-15 17:03:36,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139691812427584)>', '<ExcThread(monitor, started 139691370202880)>']
[2025-12-15 12:03:44] 2025-12-15 17:03:41,794 | INFO     | all workflow threads have been joined
[2025-12-15 12:03:44] 2025-12-15 17:03:41,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 12:03:44] 2025-12-15 17:03:41,795 | INFO     | traces error code: 0
[2025-12-15 12:03:44] 2025-12-15 17:03:41,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 12:03:44] 2025-12-15 17:03:44,519 | INFO     | PID=5581 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-15 12:03:44] 2025-12-15 17:03:44,519 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 12:03:44] 2025-12-15 17:03:44,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 12:03:44] 2025-12-15 17:03:44,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 12:03:44] 2025-12-15 17:03:44,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 12:03:44] 2025-12-15 17:03:44,520 | INFO     | [monitor] control thread has ended
[2025-12-15 12:03:44] 2025-12-15 17:03:44,614 [wrapper] ==== pilot stdout END ====
[2025-12-15 12:03:44] 2025-12-15 17:03:44,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 12:03:44] 2025-12-15 17:03:44,622 [wrapper] pilotpid: 5581
[2025-12-15 12:03:44] 2025-12-15 17:03:44,626 [wrapper] Pilot exit status: 0
[2025-12-15 12:03:44] 2025-12-15 17:03:44,641 [wrapper] pandaids: 6929524698
[2025-12-15 12:03:44] 2025-12-15 17:03:44,679 [wrapper] cleanup supervisor_pilot 12967 5582
[2025-12-15 12:03:44] 2025-12-15 17:03:44,683 [wrapper] Test setup, not cleaning
[2025-12-15 12:03:44] 2025-12-15 17:03:44,686 [wrapper] apfmon messages muted
[2025-12-15 12:03:44] 2025-12-15 17:03:44,690 [wrapper] ==== wrapper stdout END ====
[2025-12-15 12:03:44] 2025-12-15 17:03:44,693 [wrapper] ==== wrapper stderr END ====
[2025-12-15 12:03:44]  *** Error codes and diagnostics ***
[2025-12-15 12:03:44]     "exeErrorCode": 0,
[2025-12-15 12:03:44]     "exeErrorDiag": "",
[2025-12-15 12:03:44]     "pilotErrorCode": 0,
[2025-12-15 12:03:44]     "pilotErrorDiag": "",
[2025-12-15 12:03:44]  *** Listing of results directory ***
[2025-12-15 12:03:44] total 436880
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 00:25 pilot3.tar.gz
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 00:25 queuedata.json
[2025-12-15 12:03:44] -rwx------ 1 boincer umatlas     36322 Dec 15 00:25 runpilot2-wrapper.sh
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas       100 Dec 15 10:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 12:03:44] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 10:21 run_atlas
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas       105 Dec 15 10:21 job.xml
[2025-12-15 12:03:44] -rw-r--r-- 2 boincer umatlas 221284314 Dec 15 10:21 EVNT.47898761._000602.pool.root.1
[2025-12-15 12:03:44] -rw-r--r-- 2 boincer umatlas    592396 Dec 15 10:21 input.tar.gz
[2025-12-15 12:03:44] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 10:21 start_atlas.sh
[2025-12-15 12:03:44] drwxrwx--x 2 boincer umatlas      4096 Dec 15 10:21 shared
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas         0 Dec 15 10:21 boinc_lockfile
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas      2508 Dec 15 10:21 pandaJob.out
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas        57 Dec 15 10:21 setup.sh.local
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas    994489 Dec 15 10:21 agis_schedconf.cvmfs.json
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas   1516240 Dec 15 10:21 agis_ddmendpoints.agis.ALL.json
[2025-12-15 12:03:44] drwx------ 5 boincer umatlas      4096 Dec 15 10:21 pilot3
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas      5953 Dec 15 12:01 init_data.xml
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas 219591507 Dec 15 12:02 HITS.47898763._013807.pool.root.1
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas        95 Dec 15 12:02 pilot_heartbeat.json
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas       529 Dec 15 12:02 boinc_task_state.xml
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas      1043 Dec 15 12:02 memory_monitor_summary.json
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas    420735 Dec 15 12:03 log.47898763._013807.job.log.tgz.1
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas      7852 Dec 15 12:03 heartbeat.json
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 12:03 boinc_mmap_file
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas        27 Dec 15 12:03 wrapper_checkpoint.txt
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas       744 Dec 15 12:03 pilotlog.txt
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas    868243 Dec 15 12:03 log.47898763._013807.job.log.1
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas       357 Dec 15 12:03 output.list
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas       620 Dec 15 12:03 runtime_log
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas   1310720 Dec 15 12:03 result.tar.gz
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas       659 Dec 15 12:03 sdENDmbGGp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrDXKDm6s199m.diag
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas      9344 Dec 15 12:03 runtime_log.err
[2025-12-15 12:03:44] -rw-r--r-- 1 boincer umatlas     21096 Dec 15 12:03 stderr.txt
[2025-12-15 12:03:44] HITS file was successfully produced:
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas 219591507 Dec 15 12:02 shared/HITS.pool.root.1
[2025-12-15 12:03:44]  *** Contents of shared directory: ***
[2025-12-15 12:03:44] total 432424
[2025-12-15 12:03:44] -rw-r--r-- 2 boincer umatlas 221284314 Dec 15 10:21 ATLAS.root_0
[2025-12-15 12:03:44] -rw-r--r-- 2 boincer umatlas    592396 Dec 15 10:21 input.tar.gz
[2025-12-15 12:03:44] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 10:21 start_atlas.sh
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas 219591507 Dec 15 12:02 HITS.pool.root.1
[2025-12-15 12:03:44] -rw------- 1 boincer umatlas   1310720 Dec 15 12:03 result.tar.gz
12:03:46 (1797): run_atlas exited; CPU time 67104.040215
12:03:46 (1797): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN