Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:12:39 (29262): wrapper (7.7.26015): starting
10:12:39 (29262): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 10:12:39] Arguments: --nthreads 8
[2025-12-15 10:12:39] Threads: 8
[2025-12-15 10:12:39] Checking for CVMFS
[2025-12-15 10:12:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 10:12:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 10:12:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 10:12:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 10:12:39] 2.11.2.0 26213 93131 83156 154036 1 56 13846709 20275201 1 130560 0 24518999 99.839 5787749 32148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 10:12:39] CVMFS is ok
[2025-12-15 10:12:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 10:12:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 10:12:39] Further information can be found at the LHC@home message board.
[2025-12-15 10:12:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 10:12:39] Checking for apptainer binary...
[2025-12-15 10:12:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 10:12:39] Running /usr/bin/apptainer --version
[2025-12-15 10:12:39] apptainer version 1.3.2-1.el7
[2025-12-15 10:12:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 10:12:41] c-115-4.aglt2.org
[2025-12-15 10:12:41] apptainer works
[2025-12-15 10:12:41] Set ATHENA_PROC_NUMBER=8
[2025-12-15 10:12:41] Set ATHENA_CORE_NUMBER=8
[2025-12-15 10:12:41] Starting ATLAS job with PandaID=6931594953
[2025-12-15 10:12:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 12:05:14]  *** The last 200 lines of the pilot log: ***
[2025-12-15 12:05:14] 2025-12-15 17:04:21,658 | INFO     | monitor loop #494: job 0:6931594953 is in state 'finished'
[2025-12-15 12:05:14] 2025-12-15 17:04:21,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 12:05:14] 2025-12-15 17:04:22,638 | INFO     | time since job start (6684s) is within the limit (174528.0s)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,503 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 12:05:14] 2025-12-15 17:04:23,506 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-12-15 12:05:14] 2025-12-15 17:04:23,508 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931594953/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,509 | INFO     | extracted standard info from prmon json
[2025-12-15 12:05:14] 2025-12-15 17:04:23,509 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 12:05:14] 2025-12-15 17:04:23,510 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 12:05:14] 2025-12-15 17:04:23,510 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 12:05:14] 2025-12-15 17:04:23,510 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 12:05:14] 2025-12-15 17:04:23,513 | INFO     | fitting pss+swap vs Time
[2025-12-15 12:05:14] 2025-12-15 17:04:23,513 | INFO     | sum of square deviations: 401533110.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,514 | INFO     | sum of deviations: 7216557603.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,514 | INFO     | mean x: 1765814903.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,514 | INFO     | mean y: 2553255.9541284405
[2025-12-15 12:05:14] 2025-12-15 17:04:23,514 | INFO     | intersect: -31733571726.952904
[2025-12-15 12:05:14] 2025-12-15 17:04:23,514 | INFO     | chi2: 1.7583324202464903
[2025-12-15 12:05:14] 2025-12-15 17:04:23,515 | INFO     | sum of square deviations: 348769330.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,515 | INFO     | sum of deviations: 7774134751.999999
[2025-12-15 12:05:14] 2025-12-15 17:04:23,515 | INFO     | mean x: 1765814750.5
[2025-12-15 12:05:14] 2025-12-15 17:04:23,515 | INFO     | mean y: 2554868.6346153845
[2025-12-15 12:05:14] 2025-12-15 17:04:23,515 | INFO     | intersect: -39357792033.01599
[2025-12-15 12:05:14] 2025-12-15 17:04:23,516 | INFO     | chi2: 1.7603796006953447
[2025-12-15 12:05:14] 2025-12-15 17:04:23,516 | INFO     | current chi2=1.7603796006953447 (change=-0.1164273845651696 %)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,516 | INFO     | right removable region: 103
[2025-12-15 12:05:14] 2025-12-15 17:04:23,516 | INFO     | sum of square deviations: 348769330.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,516 | INFO     | sum of deviations: -11302185194.5
[2025-12-15 12:05:14] 2025-12-15 17:04:23,517 | INFO     | mean x: 1765815055.5
[2025-12-15 12:05:14] 2025-12-15 17:04:23,517 | INFO     | mean y: 2605801.7403846155
[2025-12-15 12:05:14] 2025-12-15 17:04:23,517 | INFO     | intersect: 57225437799.31683
[2025-12-15 12:05:14] 2025-12-15 17:04:23,517 | INFO     | chi2: 0.11606949675121206
[2025-12-15 12:05:14] 2025-12-15 17:04:23,517 | INFO     | current chi2=0.11606949675121206 (change=93.39888775212704 %)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,517 | INFO     | sum of square deviations: 300842850.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,518 | INFO     | sum of deviations: -14053592177.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,518 | INFO     | mean x: 1765815208.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,518 | INFO     | mean y: 2614410.3434343436
[2025-12-15 12:05:14] 2025-12-15 17:04:23,518 | INFO     | intersect: 82491019214.30147
[2025-12-15 12:05:14] 2025-12-15 17:04:23,518 | INFO     | chi2: 0.0438634602440135
[2025-12-15 12:05:14] 2025-12-15 17:04:23,519 | INFO     | current chi2=0.0438634602440135 (change=62.209312979074795 %)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,519 | INFO     | sum of square deviations: 257521107.5
[2025-12-15 12:05:14] 2025-12-15 17:04:23,519 | INFO     | sum of deviations: -13121160725.5
[2025-12-15 12:05:14] 2025-12-15 17:04:23,519 | INFO     | mean x: 1765815360.5
[2025-12-15 12:05:14] 2025-12-15 17:04:23,519 | INFO     | mean y: 2611108.585106383
[2025-12-15 12:05:14] 2025-12-15 17:04:23,519 | INFO     | intersect: 89974059979.73143
[2025-12-15 12:05:14] 2025-12-15 17:04:23,520 | INFO     | chi2: 0.039365142941162994
[2025-12-15 12:05:14] 2025-12-15 17:04:23,520 | INFO     | current chi2=0.039365142941162994 (change=10.255272333341361 %)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,520 | INFO     | left removable region: 30
[2025-12-15 12:05:14] 2025-12-15 17:04:23,520 | INFO     | sum of square deviations: 120605052.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,520 | INFO     | sum of deviations: -8015288736.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,521 | INFO     | mean x: 1765815635.0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,521 | INFO     | mean y: 2599225.616438356
[2025-12-15 12:05:14] 2025-12-15 17:04:23,521 | INFO     | intersect: 117356905155.25684
[2025-12-15 12:05:14] 2025-12-15 17:04:23,521 | INFO     | chi2: 0.03113456527231449
[2025-12-15 12:05:14] 2025-12-15 17:04:23,521 | INFO     | current memory leak: -66.46 B/s (using 73 data points, chi2=0.03)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,521 | INFO     | could have reported an average CPU frequency of 2090 MHz (7 samples)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,522 | INFO     | ..............................
[2025-12-15 12:05:14] 2025-12-15 17:04:23,522 | INFO     | . Timing measurements:
[2025-12-15 12:05:14] 2025-12-15 17:04:23,522 | INFO     | . get job = 0 s
[2025-12-15 12:05:14] 2025-12-15 17:04:23,522 | INFO     | . initial setup = 2 s
[2025-12-15 12:05:14] 2025-12-15 17:04:23,522 | INFO     | . payload setup = 8 s
[2025-12-15 12:05:14] 2025-12-15 17:04:23,522 | INFO     | . stage-in = 0 s
[2025-12-15 12:05:14] 2025-12-15 17:04:23,522 | INFO     | . payload execution = 6647 s
[2025-12-15 12:05:14] 2025-12-15 17:04:23,522 | INFO     | . stage-out = 0 s
[2025-12-15 12:05:14] 2025-12-15 17:04:23,522 | INFO     | . log creation = 0 s
[2025-12-15 12:05:14] 2025-12-15 17:04:23,523 | INFO     | ..............................
[2025-12-15 12:05:14] 2025-12-15 17:04:23,604 | INFO     | 
[2025-12-15 12:05:14] 2025-12-15 17:04:23,604 | INFO     | job summary report
[2025-12-15 12:05:14] 2025-12-15 17:04:23,605 | INFO     | --------------------------------------------------
[2025-12-15 12:05:14] 2025-12-15 17:04:23,605 | INFO     | PanDA job id: 6931594953
[2025-12-15 12:05:14] 2025-12-15 17:04:23,605 | INFO     | task id: 47899050
[2025-12-15 12:05:14] 2025-12-15 17:04:23,605 | INFO     | errors: (none)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 12:05:14] 2025-12-15 17:04:23,605 | INFO     | pilot state: finished 
[2025-12-15 12:05:14] 2025-12-15 17:04:23,606 | INFO     | transexitcode: 0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,606 | INFO     | exeerrorcode: 0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,606 | INFO     | exeerrordiag: 
[2025-12-15 12:05:14] 2025-12-15 17:04:23,606 | INFO     | exitcode: 0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,606 | INFO     | exitmsg: OK
[2025-12-15 12:05:14] 2025-12-15 17:04:23,606 | INFO     | cpuconsumptiontime: 48400 s
[2025-12-15 12:05:14] 2025-12-15 17:04:23,607 | INFO     | nevents: 400
[2025-12-15 12:05:14] 2025-12-15 17:04:23,607 | INFO     | neventsw: 0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,607 | INFO     | pid: 7176
[2025-12-15 12:05:14] 2025-12-15 17:04:23,607 | INFO     | pgrp: 7176
[2025-12-15 12:05:14] 2025-12-15 17:04:23,607 | INFO     | corecount: 8
[2025-12-15 12:05:14] 2025-12-15 17:04:23,607 | INFO     | event service: False
[2025-12-15 12:05:14] 2025-12-15 17:04:23,608 | INFO     | sizes: {0: 2283932, 6: 2284194, 11: 2284222, 6658: 2311287, 6660: 2320285, 6661: 2320341, 6668: 2320663}
[2025-12-15 12:05:14] 2025-12-15 17:04:23,608 | INFO     | --------------------------------------------------
[2025-12-15 12:05:14] 2025-12-15 17:04:23,608 | INFO     | 
[2025-12-15 12:05:14] 2025-12-15 17:04:23,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 12:05:14] 2025-12-15 17:04:23,637 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,641 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,641 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 12:05:14] 2025-12-15 17:04:23,641 | INFO     | job 6931594953 has completed (purged errors)
[2025-12-15 12:05:14] 2025-12-15 17:04:23,642 | INFO     | overall cleanup function is called
[2025-12-15 12:05:14] 2025-12-15 17:04:24,650 | INFO     | --- collectZombieJob: --- 10, [7176]
[2025-12-15 12:05:14] 2025-12-15 17:04:24,650 | INFO     | zombie collector waiting for pid 7176
[2025-12-15 12:05:14] 2025-12-15 17:04:24,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 12:05:14] 2025-12-15 17:04:24,650 | INFO     | collected zombie processes
[2025-12-15 12:05:14] 2025-12-15 17:04:24,651 | INFO     | will attempt to kill all subprocesses of pid=7176
[2025-12-15 12:05:14] 2025-12-15 17:04:24,733 | INFO     | process IDs to be killed: [7176] (in reverse order)
[2025-12-15 12:05:14] 2025-12-15 17:04:24,794 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 12:05:14] 2025-12-15 17:04:24,795 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 12:05:14] 2025-12-15 17:04:24,799 | INFO     | did not find any defunct processes belonging to 7176
[2025-12-15 12:05:14] 2025-12-15 17:04:24,803 | INFO     | did not find any defunct processes belonging to 7176
[2025-12-15 12:05:14] 2025-12-15 17:04:24,803 | INFO     | ready for new job
[2025-12-15 12:05:14] 2025-12-15 17:04:24,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 12:05:14] 2025-12-15 17:04:24,805 | INFO     | ***************************************
[2025-12-15 12:05:14] 2025-12-15 17:04:24,805 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 12:05:14] 2025-12-15 17:04:24,805 | INFO     | ***************************************
[2025-12-15 12:05:14] 2025-12-15 17:04:24,805 | INFO     | 
[2025-12-15 12:05:14] 2025-12-15 17:04:24,806 | INFO     | architecture information:
[2025-12-15 12:05:14] 2025-12-15 17:04:24,806 | INFO     | executing command: cat /etc/os-release
[2025-12-15 12:05:14] 2025-12-15 17:04:24,826 | INFO     | cat /etc/os-release:
[2025-12-15 12:05:14] NAME="CentOS Linux"
[2025-12-15 12:05:14] VERSION="7 (Core)"
[2025-12-15 12:05:14] ID="centos"
[2025-12-15 12:05:14] ID_LIKE="rhel fedora"
[2025-12-15 12:05:14] VERSION_ID="7"
[2025-12-15 12:05:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 12:05:14] ANSI_COLOR="0;31"
[2025-12-15 12:05:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 12:05:14] HOME_URL="https://www.centos.org/"
[2025-12-15 12:05:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 12:05:14] 
[2025-12-15 12:05:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 12:05:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 12:05:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 12:05:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 12:05:14] 
[2025-12-15 12:05:14] 2025-12-15 17:04:24,827 | INFO     | ***************************************
[2025-12-15 12:05:14] 2025-12-15 17:04:25,330 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 12:05:14] 2025-12-15 17:04:25,354 | INFO     | sufficient remaining disk space (18644729856 B)
[2025-12-15 12:05:14] 2025-12-15 17:04:25,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 12:05:14] 2025-12-15 17:04:25,355 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 12:05:14] 2025-12-15 17:04:25,355 | INFO     | update_server=False
[2025-12-15 12:05:14] 2025-12-15 17:04:25,355 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 12:05:14] 2025-12-15 17:04:25,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 12:05:14] 2025-12-15 17:04:25,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 12:05:14] 2025-12-15 17:04:25,356 | INFO     | aborting loop
[2025-12-15 12:05:14] 2025-12-15 17:04:25,891 | INFO     | all data control threads have been joined
[2025-12-15 12:05:14] 2025-12-15 17:04:25,909 | INFO     | all payload control threads have been joined
[2025-12-15 12:05:14] 2025-12-15 17:04:26,155 | INFO     | all job control threads have been joined
[2025-12-15 12:05:14] 2025-12-15 17:04:26,361 | INFO     | [job] queue monitor thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:26,361 | INFO     | [job] retrieve thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:26,362 | INFO     | [job] job monitor thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:26,474 | INFO     | [payload] validate_post thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:26,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 12:05:14] 2025-12-15 17:04:26,860 | INFO     | [payload] failed_post thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:26,897 | INFO     | [data] control thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:26,915 | INFO     | [payload] control thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:26,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 12:05:14] 2025-12-15 17:04:27,160 | INFO     | [job] control thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:27,205 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:27,356 | INFO     | [data] copytool_in thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:27,374 | INFO     | [job] validate thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:27,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:27,845 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:27,845 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:28,843 | INFO     | [data] copytool_out thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:30,921 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 12:05:14] 2025-12-15 17:04:55,850 | INFO     | PID=597 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-12-15 12:05:14] 2025-12-15 17:04:55,851 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 12:05:14] 2025-12-15 17:04:55,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 12:05:14] 2025-12-15 17:04:55,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 12:05:14] 2025-12-15 17:05:08,662 | INFO     | [monitor] cgroup control has ended
[2025-12-15 12:05:14] 2025-12-15 17:05:08,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365346666304)>', '<ExcThread(monitor, started 140364547610368)>']
[2025-12-15 12:05:14] 2025-12-15 17:05:08,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 12:05:14] 2025-12-15 17:05:08,919 | INFO     | [monitor] control thread has ended
[2025-12-15 12:05:14] 2025-12-15 17:05:13,915 | INFO     | all workflow threads have been joined
[2025-12-15 12:05:14] 2025-12-15 17:05:13,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 12:05:14] 2025-12-15 17:05:13,916 | INFO     | traces error code: 0
[2025-12-15 12:05:14] 2025-12-15 17:05:13,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 12:05:14] 2025-12-15 17:05:14,014 [wrapper] ==== pilot stdout END ====
[2025-12-15 12:05:14] 2025-12-15 17:05:14,020 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 12:05:14] 2025-12-15 17:05:14,025 [wrapper] pilotpid: 597
[2025-12-15 12:05:14] 2025-12-15 17:05:14,030 [wrapper] Pilot exit status: 0
[2025-12-15 12:05:14] 2025-12-15 17:05:14,052 [wrapper] pandaids: 6931594953
[2025-12-15 12:05:14] 2025-12-15 17:05:14,106 [wrapper] cleanup supervisor_pilot 29068 598
[2025-12-15 12:05:14] 2025-12-15 17:05:14,111 [wrapper] Test setup, not cleaning
[2025-12-15 12:05:14] 2025-12-15 17:05:14,115 [wrapper] apfmon messages muted
[2025-12-15 12:05:14] 2025-12-15 17:05:14,120 [wrapper] ==== wrapper stdout END ====
[2025-12-15 12:05:14] 2025-12-15 17:05:14,124 [wrapper] ==== wrapper stderr END ====
[2025-12-15 12:05:14]  *** Error codes and diagnostics ***
[2025-12-15 12:05:14]     "exeErrorCode": 0,
[2025-12-15 12:05:14]     "exeErrorDiag": "",
[2025-12-15 12:05:14]     "pilotErrorCode": 0,
[2025-12-15 12:05:14]     "pilotErrorDiag": "",
[2025-12-15 12:05:14]  *** Listing of results directory ***
[2025-12-15 12:05:14] total 372756
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 05:33 pilot3.tar.gz
[2025-12-15 12:05:14] -rwx------ 1 boincer umatlas     36322 Dec 15 05:33 runpilot2-wrapper.sh
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 05:34 queuedata.json
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas       100 Dec 15 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 12:05:14] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 10:12 run_atlas
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas       105 Dec 15 10:12 job.xml
[2025-12-15 12:05:14] -rw-r--r-- 2 boincer umatlas 196070245 Dec 15 10:12 EVNT.47899048._000064.pool.root.1
[2025-12-15 12:05:14] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 10:12 start_atlas.sh
[2025-12-15 12:05:14] drwxrwx--x 2 boincer umatlas      4096 Dec 15 10:12 shared
[2025-12-15 12:05:14] -rw-r--r-- 2 boincer umatlas    592381 Dec 15 10:12 input.tar.gz
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas         0 Dec 15 10:12 boinc_lockfile
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas      2489 Dec 15 10:12 pandaJob.out
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas        57 Dec 15 10:12 setup.sh.local
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas    994497 Dec 15 10:12 agis_schedconf.cvmfs.json
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas   1516240 Dec 15 10:12 agis_ddmendpoints.agis.ALL.json
[2025-12-15 12:05:14] drwx------ 5 boincer umatlas      4096 Dec 15 10:12 pilot3
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas      5909 Dec 15 12:02 init_data.xml
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas 179130176 Dec 15 12:03 HITS.47899050._001584.pool.root.1
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas       530 Dec 15 12:04 boinc_task_state.xml
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas      1062 Dec 15 12:04 memory_monitor_summary.json
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas    350481 Dec 15 12:04 log.47899050._001584.job.log.tgz.1
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas      7845 Dec 15 12:04 heartbeat.json
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas        95 Dec 15 12:04 pilot_heartbeat.json
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 12:05 boinc_mmap_file
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas        27 Dec 15 12:05 wrapper_checkpoint.txt
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas      4744 Dec 15 12:05 pilotlog.txt
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas    943962 Dec 15 12:05 log.47899050._001584.job.log.1
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas       357 Dec 15 12:05 output.list
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas       620 Dec 15 12:05 runtime_log
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas   1310720 Dec 15 12:05 result.tar.gz
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas      9337 Dec 15 12:05 runtime_log.err
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas       658 Dec 15 12:05 2LqLDm24Kp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSITKDmq9JMNo.diag
[2025-12-15 12:05:14] -rw-r--r-- 1 boincer umatlas     21056 Dec 15 12:05 stderr.txt
[2025-12-15 12:05:14] HITS file was successfully produced:
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas 179130176 Dec 15 12:03 shared/HITS.pool.root.1
[2025-12-15 12:05:14]  *** Contents of shared directory: ***
[2025-12-15 12:05:14] total 368288
[2025-12-15 12:05:14] -rw-r--r-- 2 boincer umatlas 196070245 Dec 15 10:12 ATLAS.root_0
[2025-12-15 12:05:14] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 10:12 start_atlas.sh
[2025-12-15 12:05:14] -rw-r--r-- 2 boincer umatlas    592381 Dec 15 10:12 input.tar.gz
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas 179130176 Dec 15 12:03 HITS.pool.root.1
[2025-12-15 12:05:14] -rw------- 1 boincer umatlas   1310720 Dec 15 12:05 result.tar.gz
12:05:15 (29262): run_atlas exited; CPU time 48384.094254
12:05:15 (29262): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN