Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:11:00 (370930): wrapper (7.7.26015): starting
10:11:00 (370930): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 10:11:00] Arguments: --nthreads 8
[2025-12-15 10:11:00] Threads: 8
[2025-12-15 10:11:00] Checking for CVMFS
[2025-12-15 10:11:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 10:11:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 10:11:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 10:11:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 10:11:01] 2.13.3.0 12497 57437 232736 154036 1 128 17021483 32935937 25821 16776704 0 342974374 99.483 455505760 36161 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-15 10:11:01] CVMFS is ok
[2025-12-15 10:11:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 10:11:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 10:11:01] Further information can be found at the LHC@home message board.
[2025-12-15 10:11:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 10:11:01] Checking for apptainer binary...
[2025-12-15 10:11:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 10:11:01] Running /usr/bin/apptainer --version
[2025-12-15 10:11:01] apptainer version 1.4.5-2.el9
[2025-12-15 10:11:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 10:11:02] c7-7-35.aglt2.org
[2025-12-15 10:11:02] apptainer works
[2025-12-15 10:11:02] Set ATHENA_PROC_NUMBER=8
[2025-12-15 10:11:02] Set ATHENA_CORE_NUMBER=8
[2025-12-15 10:11:02] Starting ATLAS job with PandaID=6929524489
[2025-12-15 10:11:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 14:28:12]  *** The last 200 lines of the pilot log: ***
[2025-12-15 14:28:12] 2025-12-15 19:27:03,363 | INFO     | PID=374827 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 14:28:12] 2025-12-15 19:27:03,364 | INFO     | .. there are 25 such processes running
[2025-12-15 14:28:12] 2025-12-15 19:27:03,578 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 14:28:12] 2025-12-15 19:27:03,585 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3044.3895625000005
[2025-12-15 14:28:12] 2025-12-15 19:27:03,604 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6929524489/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 14:28:12] 2025-12-15 19:27:03,605 | INFO     | extracted standard info from prmon json
[2025-12-15 14:28:12] 2025-12-15 19:27:03,605 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 14:28:12] 2025-12-15 19:27:03,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 14:28:12] 2025-12-15 19:27:03,605 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 14:28:12] 2025-12-15 19:27:03,605 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 14:28:12] 2025-12-15 19:27:03,613 | INFO     | fitting pss+swap vs Time
[2025-12-15 14:28:12] 2025-12-15 19:27:03,614 | INFO     | sum of square deviations: 4844772668.063972
[2025-12-15 14:28:12] 2025-12-15 19:27:03,616 | INFO     | sum of deviations: -76837791505.28
[2025-12-15 14:28:12] 2025-12-15 19:27:03,616 | INFO     | mean x: 1765819158.912
[2025-12-15 14:28:12] 2025-12-15 19:27:03,621 | INFO     | mean y: 2554127.26
[2025-12-15 14:28:12] 2025-12-15 19:27:03,621 | INFO     | intersect: 28008335546.6654
[2025-12-15 14:28:12] 2025-12-15 19:27:03,621 | INFO     | chi2: 2.701659336860825
[2025-12-15 14:28:12] 2025-12-15 19:27:03,622 | INFO     | sum of square deviations: 4559877809.6979475
[2025-12-15 14:28:12] 2025-12-15 19:27:03,623 | INFO     | sum of deviations: -57284724098.551056
[2025-12-15 14:28:12] 2025-12-15 19:27:03,623 | INFO     | mean x: 1765819006.4204082
[2025-12-15 14:28:12] 2025-12-15 19:27:03,624 | INFO     | mean y: 2564441.5102040814
[2025-12-15 14:28:12] 2025-12-15 19:27:03,624 | INFO     | intersect: 22186153303.394913
[2025-12-15 14:28:12] 2025-12-15 19:27:03,624 | INFO     | chi2: 1.8458826983864018
[2025-12-15 14:28:12] 2025-12-15 19:27:03,624 | INFO     | current chi2=1.8458826983864018 (change=31.675963982519978 %)
[2025-12-15 14:28:12] 2025-12-15 19:27:03,624 | INFO     | sum of square deviations: 4286378513.795813
[2025-12-15 14:28:12] 2025-12-15 19:27:03,638 | INFO     | sum of deviations: -55545177784.854225
[2025-12-15 14:28:12] 2025-12-15 19:27:03,638 | INFO     | mean x: 1765818853.9291666
[2025-12-15 14:28:12] 2025-12-15 19:27:03,638 | INFO     | mean y: 2565411.4791666665
[2025-12-15 14:28:12] 2025-12-15 19:27:03,638 | INFO     | intersect: 22884987451.82429
[2025-12-15 14:28:12] 2025-12-15 19:27:03,639 | INFO     | chi2: 1.8416911367188538
[2025-12-15 14:28:12] 2025-12-15 19:27:03,639 | INFO     | current chi2=1.8416911367188538 (change=0.22707627473902764 %)
[2025-12-15 14:28:12] 2025-12-15 19:27:03,639 | INFO     | right removable region: 239
[2025-12-15 14:28:12] 2025-12-15 19:27:03,639 | INFO     | sum of square deviations: 4559814979.6979475
[2025-12-15 14:28:12] 2025-12-15 19:27:03,679 | INFO     | sum of deviations: -114242023956.77138
[2025-12-15 14:28:12] 2025-12-15 19:27:03,679 | INFO     | mean x: 1765819311.4204082
[2025-12-15 14:28:12] 2025-12-15 19:27:03,679 | INFO     | mean y: 2573935.1142857145
[2025-12-15 14:28:12] 2025-12-15 19:27:03,679 | INFO     | intersect: 44243573400.40025
[2025-12-15 14:28:12] 2025-12-15 19:27:03,680 | INFO     | chi2: 1.1617119707047845
[2025-12-15 14:28:12] 2025-12-15 19:27:03,680 | INFO     | current chi2=1.1617119707047845 (change=57.000057155443294 %)
[2025-12-15 14:28:12] 2025-12-15 19:27:03,680 | INFO     | sum of square deviations: 4286252853.795813
[2025-12-15 14:28:12] 2025-12-15 19:27:03,681 | INFO     | sum of deviations: -106293913529.74165
[2025-12-15 14:28:12] 2025-12-15 19:27:03,681 | INFO     | mean x: 1765819463.9291666
[2025-12-15 14:28:12] 2025-12-15 19:27:03,681 | INFO     | mean y: 2569480.191666667
[2025-12-15 14:28:12] 2025-12-15 19:27:03,682 | INFO     | intersect: 43792767541.37282
[2025-12-15 14:28:12] 2025-12-15 19:27:03,682 | INFO     | chi2: 1.1503109278591819
[2025-12-15 14:28:12] 2025-12-15 19:27:03,682 | INFO     | current chi2=1.1503109278591819 (change=0.9814001347240883 %)
[2025-12-15 14:28:12] 2025-12-15 19:27:03,682 | INFO     | left removable region: 20
[2025-12-15 14:28:12] 2025-12-15 19:27:03,682 | INFO     | sum of square deviations: 3256649160.420079
[2025-12-15 14:28:12] 2025-12-15 19:27:03,710 | INFO     | sum of deviations: -62198624311.2329
[2025-12-15 14:28:12] 2025-12-15 19:27:03,711 | INFO     | mean x: 1765819433.4611871
[2025-12-15 14:28:12] 2025-12-15 19:27:03,711 | INFO     | mean y: 2567776.97260274
[2025-12-15 14:28:12] 2025-12-15 19:27:03,711 | INFO     | intersect: 33727889152.751133
[2025-12-15 14:28:12] 2025-12-15 19:27:03,711 | INFO     | chi2: 0.2157727555400396
[2025-12-15 14:28:12] 2025-12-15 19:27:03,711 | INFO     | current memory leak: -19.10 B/s (using 219 data points, chi2=0.22)
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | could have reported an average CPU frequency of 3033 MHz (12 samples)
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | ..............................
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | . Timing measurements:
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | . get job = 0 s
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | . initial setup = 6 s
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | . payload setup = 20 s
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | . stage-in = 0 s
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | . payload execution = 15249 s
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | . stage-out = 5 s
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | . log creation = 0 s
[2025-12-15 14:28:12] 2025-12-15 19:27:03,712 | INFO     | ..............................
[2025-12-15 14:28:12] 2025-12-15 19:27:03,912 | INFO     | 
[2025-12-15 14:28:12] 2025-12-15 19:27:03,912 | INFO     | job summary report
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | --------------------------------------------------
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | PanDA job id: 6929524489
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | task id: 47898763
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | errors: (none)
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | pilot state: finished 
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | transexitcode: 0
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | exeerrorcode: 0
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | exeerrordiag: 
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | exitcode: 0
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | exitmsg: OK
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | cpuconsumptiontime: 47852 s
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | nevents: 400
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | neventsw: 0
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | pid: 385191
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | pgrp: 385191
[2025-12-15 14:28:12] 2025-12-15 19:27:03,913 | INFO     | corecount: 8
[2025-12-15 14:28:12] 2025-12-15 19:27:03,914 | INFO     | event service: False
[2025-12-15 14:28:12] 2025-12-15 19:27:03,914 | INFO     | sizes: {0: 2283787, 1: 2283986, 12: 2283986, 16: 2284276, 23: 2284304, 15274: 2315580, 15280: 2324634, 15289: 2324772}
[2025-12-15 14:28:12] 2025-12-15 19:27:03,914 | INFO     | --------------------------------------------------
[2025-12-15 14:28:12] 2025-12-15 19:27:03,914 | INFO     | 
[2025-12-15 14:28:12] 2025-12-15 19:27:03,914 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-15 14:28:12] 2025-12-15 19:27:03,945 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,946 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | job 6929524489 has completed (purged errors)
[2025-12-15 14:28:12] 2025-12-15 19:27:03,947 | INFO     | overall cleanup function is called
[2025-12-15 14:28:12] 2025-12-15 19:27:04,960 | INFO     | --- collectZombieJob: --- 10, [385191]
[2025-12-15 14:28:12] 2025-12-15 19:27:04,960 | INFO     | zombie collector waiting for pid 385191
[2025-12-15 14:28:12] 2025-12-15 19:27:04,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 14:28:12] 2025-12-15 19:27:04,960 | INFO     | collected zombie processes
[2025-12-15 14:28:12] 2025-12-15 19:27:04,960 | INFO     | will attempt to kill all subprocesses of pid=385191
[2025-12-15 14:28:12] 2025-12-15 19:27:06,717 | INFO     | process IDs to be killed: [385191] (in reverse order)
[2025-12-15 14:28:12] 2025-12-15 19:27:06,901 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 14:28:12] 2025-12-15 19:27:06,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 14:28:12] 2025-12-15 19:27:06,938 | INFO     | did not find any defunct processes belonging to 385191
[2025-12-15 14:28:12] 2025-12-15 19:27:06,978 | INFO     | did not find any defunct processes belonging to 385191
[2025-12-15 14:28:12] 2025-12-15 19:27:06,979 | INFO     | ready for new job
[2025-12-15 14:28:12] 2025-12-15 19:27:06,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 14:28:12] 2025-12-15 19:27:06,981 | INFO     | ***************************************
[2025-12-15 14:28:12] 2025-12-15 19:27:06,981 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 14:28:12] 2025-12-15 19:27:06,981 | INFO     | ***************************************
[2025-12-15 14:28:12] 2025-12-15 19:27:06,981 | INFO     | 
[2025-12-15 14:28:12] 2025-12-15 19:27:06,997 | INFO     | architecture information:
[2025-12-15 14:28:12] 2025-12-15 19:27:06,998 | INFO     | executing command: cat /etc/os-release
[2025-12-15 14:28:12] 2025-12-15 19:27:07,023 | INFO     | cat /etc/os-release:
[2025-12-15 14:28:12] NAME="CentOS Linux"
[2025-12-15 14:28:12] VERSION="7 (Core)"
[2025-12-15 14:28:12] ID="centos"
[2025-12-15 14:28:12] ID_LIKE="rhel fedora"
[2025-12-15 14:28:12] VERSION_ID="7"
[2025-12-15 14:28:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 14:28:12] ANSI_COLOR="0;31"
[2025-12-15 14:28:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 14:28:12] HOME_URL="https://www.centos.org/"
[2025-12-15 14:28:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 14:28:12] 
[2025-12-15 14:28:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 14:28:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 14:28:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 14:28:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 14:28:12] 
[2025-12-15 14:28:12] 2025-12-15 19:27:07,024 | INFO     | ***************************************
[2025-12-15 14:28:12] 2025-12-15 19:27:07,527 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-15 14:28:12] 2025-12-15 19:27:07,566 | INFO     | sufficient remaining disk space (74017931264 B)
[2025-12-15 14:28:12] 2025-12-15 19:27:07,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 14:28:12] 2025-12-15 19:27:07,567 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 14:28:12] 2025-12-15 19:27:07,567 | INFO     | update_server=False
[2025-12-15 14:28:12] 2025-12-15 19:27:07,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 14:28:12] 2025-12-15 19:27:07,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 14:28:12] 2025-12-15 19:27:07,568 | INFO     | aborting loop
[2025-12-15 14:28:12] 2025-12-15 19:27:08,247 | INFO     | all data control threads have been joined
[2025-12-15 14:28:12] 2025-12-15 19:27:08,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 14:28:12] 2025-12-15 19:27:08,573 | INFO     | [job] retrieve thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:08,574 | INFO     | [job] job monitor thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:08,765 | INFO     | all payload control threads have been joined
[2025-12-15 14:28:12] 2025-12-15 19:27:08,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 14:28:12] 2025-12-15 19:27:08,958 | INFO     | [job] validate thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:08,991 | INFO     | all job control threads have been joined
[2025-12-15 14:28:12] 2025-12-15 19:27:09,253 | INFO     | [data] control thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:09,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:09,406 | INFO     | [payload] failed_post thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:09,541 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:09,779 | INFO     | [payload] control thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:09,814 | INFO     | [payload] validate_post thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:09,835 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:09,849 | INFO     | [data] copytool_in thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:09,925 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:09,945 | INFO     | [job] queue monitor thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:09,997 | INFO     | [job] control thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:10,318 | INFO     | [data] copytool_out thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:10,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 14:28:12] 2025-12-15 19:27:14,475 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 14:28:12] 2025-12-15 19:27:37,074 | INFO     | PID=374827 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 14:28:12] 2025-12-15 19:27:37,074 | INFO     | .. there are 25 such processes running
[2025-12-15 14:28:12] 2025-12-15 19:27:37,074 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 14:28:12] 2025-12-15 19:27:37,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 14:28:12] 2025-12-15 19:27:37,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 14:28:12] 2025-12-15 19:28:05,598 | INFO     | [monitor] cgroup control has ended
[2025-12-15 14:28:12] 2025-12-15 19:28:06,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926116804416)>', '<ExcThread(monitor, started 139925261379328)>']
[2025-12-15 14:28:12] 2025-12-15 19:28:06,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 14:28:12] 2025-12-15 19:28:06,286 | INFO     | [monitor] control thread has ended
[2025-12-15 14:28:12] 2025-12-15 19:28:11,049 | INFO     | all workflow threads have been joined
[2025-12-15 14:28:12] 2025-12-15 19:28:11,049 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 14:28:12] 2025-12-15 19:28:11,049 | INFO     | traces error code: 0
[2025-12-15 14:28:12] 2025-12-15 19:28:11,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 14:28:12] 2025-12-15 19:28:11,470 [wrapper] ==== pilot stdout END ====
[2025-12-15 14:28:12] 2025-12-15 19:28:11,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 14:28:12] 2025-12-15 19:28:11,477 [wrapper] pilotpid: 374827
[2025-12-15 14:28:12] 2025-12-15 19:28:11,482 [wrapper] Pilot exit status: 0
[2025-12-15 14:28:12] 2025-12-15 19:28:11,501 [wrapper] pandaids: 6929524489
[2025-12-15 14:28:12] 2025-12-15 19:28:11,651 [wrapper] cleanup supervisor_pilot 1319747 374828
[2025-12-15 14:28:12] 2025-12-15 19:28:11,680 [wrapper] Test setup, not cleaning
[2025-12-15 14:28:12] 2025-12-15 19:28:11,699 [wrapper] apfmon messages muted
[2025-12-15 14:28:12] 2025-12-15 19:28:11,731 [wrapper] ==== wrapper stdout END ====
[2025-12-15 14:28:12] 2025-12-15 19:28:11,736 [wrapper] ==== wrapper stderr END ====
[2025-12-15 14:28:12]  *** Error codes and diagnostics ***
[2025-12-15 14:28:12]     "exeErrorCode": 0,
[2025-12-15 14:28:12]     "exeErrorDiag": "",
[2025-12-15 14:28:12]     "pilotErrorCode": 0,
[2025-12-15 14:28:12]     "pilotErrorDiag": "",
[2025-12-15 14:28:12]  *** Listing of results directory ***
[2025-12-15 14:28:12] total 446840
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 18:13 pilot3.tar.gz
[2025-12-15 14:28:12] -rwx------. 1 boincer umatlas     36322 Dec 14 18:17 runpilot2-wrapper.sh
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 18:18 queuedata.json
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas       100 Dec 15 10:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 14:28:12] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 10:10 run_atlas
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas       105 Dec 15 10:10 job.xml
[2025-12-15 14:28:12] -rw-r--r--. 2 boincer umatlas 222694965 Dec 15 10:11 EVNT.47898761._000428.pool.root.1
[2025-12-15 14:28:12] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 10:11 start_atlas.sh
[2025-12-15 14:28:12] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 10:11 shared
[2025-12-15 14:28:12] -rw-r--r--. 2 boincer umatlas    592401 Dec 15 10:11 input.tar.gz
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas         0 Dec 15 10:11 boinc_lockfile
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas      2508 Dec 15 10:11 pandaJob.out
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas        57 Dec 15 10:11 setup.sh.local
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas    994497 Dec 15 10:11 agis_schedconf.cvmfs.json
[2025-12-15 14:28:12] drwx------. 5 boincer umatlas      4096 Dec 15 10:11 pilot3
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas      6947 Dec 15 14:22 init_data.xml
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas 226086841 Dec 15 14:25 HITS.47898763._013598.pool.root.1
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas       530 Dec 15 14:25 boinc_task_state.xml
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas      1050 Dec 15 14:26 memory_monitor_summary.json
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas   1516240 Dec 15 14:26 agis_ddmendpoints.agis.ALL.json
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas        95 Dec 15 14:26 pilot_heartbeat.json
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas    472136 Dec 15 14:26 log.47898763._013598.job.log.tgz.1
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas      7810 Dec 15 14:27 heartbeat.json
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas        28 Dec 15 14:28 wrapper_checkpoint.txt
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas      4823 Dec 15 14:28 pilotlog.txt
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas   1958737 Dec 15 14:28 log.47898763._013598.job.log.1
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas       357 Dec 15 14:28 output.list
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 14:28 boinc_mmap_file
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas       620 Dec 15 14:28 runtime_log
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas   2447360 Dec 15 14:28 result.tar.gz
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas      9338 Dec 15 14:28 runtime_log.err
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas       659 Dec 15 14:28 2rHNDmkWAp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBNSKDmmCC1Po.diag
[2025-12-15 14:28:12] -rw-r--r--. 1 boincer umatlas     21242 Dec 15 14:28 stderr.txt
[2025-12-15 14:28:12] HITS file was successfully produced:
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas 226086841 Dec 15 14:25 shared/HITS.pool.root.1
[2025-12-15 14:28:12]  *** Contents of shared directory: ***
[2025-12-15 14:28:12] total 441260
[2025-12-15 14:28:12] -rw-r--r--. 2 boincer umatlas 222694965 Dec 15 10:11 ATLAS.root_0
[2025-12-15 14:28:12] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 10:11 start_atlas.sh
[2025-12-15 14:28:12] -rw-r--r--. 2 boincer umatlas    592401 Dec 15 10:11 input.tar.gz
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas 226086841 Dec 15 14:25 HITS.pool.root.1
[2025-12-15 14:28:12] -rw-------. 1 boincer umatlas   2447360 Dec 15 14:28 result.tar.gz
14:28:14 (370930): run_atlas exited; CPU time 48418.148783
14:28:14 (370930): called boinc_finish(0)

</stderr_txt>
]]>

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