Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:31:07 (3470767): wrapper (7.7.26015): starting
14:31:07 (3470767): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 14:31:07] Arguments: --nthreads 8
[2025-12-15 14:31:07] Threads: 8
[2025-12-15 14:31:07] Checking for CVMFS
[2025-12-15 14:31:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 14:31:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 14:31:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 14:31:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 14:31:11] 2.13.3.0 9435 57698 317976 154044 2 383 18685033 32935937 16572 16776704 0 283467162 99.707 210173396 32864 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-15 14:31:11] CVMFS is ok
[2025-12-15 14:31:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 14:31:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 14:31:11] Further information can be found at the LHC@home message board.
[2025-12-15 14:31:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 14:31:11] Checking for apptainer binary...
[2025-12-15 14:31:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 14:31:11] Running /usr/bin/apptainer --version
[2025-12-15 14:31:11] apptainer version 1.4.5-2.el9
[2025-12-15 14:31:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 14:31:12] c-8-17.aglt2.org
[2025-12-15 14:31:12] apptainer works
[2025-12-15 14:31:12] Set ATHENA_PROC_NUMBER=8
[2025-12-15 14:31:12] Set ATHENA_CORE_NUMBER=8
[2025-12-15 14:31:12] Starting ATLAS job with PandaID=6931295620
[2025-12-15 14:31:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 20:28:33]  *** The last 200 lines of the pilot log: ***
[2025-12-15 20:28:33] 2025-12-16 01:27:49,144 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1927749999995
[2025-12-15 20:28:33] 2025-12-16 01:27:49,163 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6931295620/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,164 | INFO     | extracted standard info from prmon json
[2025-12-15 20:28:33] 2025-12-16 01:27:49,164 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 20:28:33] 2025-12-16 01:27:49,164 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 20:28:33] 2025-12-16 01:27:49,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 20:28:33] 2025-12-16 01:27:49,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 20:28:33] 2025-12-16 01:27:49,251 | INFO     | monitor loop #1028: job 0:6931295620 is in state 'finished'
[2025-12-15 20:28:33] 2025-12-16 01:27:49,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,254 | INFO     | fitting pss+swap vs Time
[2025-12-15 20:28:33] 2025-12-16 01:27:49,255 | INFO     | sum of square deviations: 12957773389.14701
[2025-12-15 20:28:33] 2025-12-16 01:27:49,289 | INFO     | sum of deviations: 142837327768.19305
[2025-12-15 20:28:33] 2025-12-16 01:27:49,290 | INFO     | mean x: 1765837854.7608068
[2025-12-15 20:28:33] 2025-12-16 01:27:49,310 | INFO     | mean y: 2477008.8818443804
[2025-12-15 20:28:33] 2025-12-16 01:27:49,310 | INFO     | intersect: -19462870383.07127
[2025-12-15 20:28:33] 2025-12-16 01:27:49,311 | INFO     | chi2: 4.246733992385876
[2025-12-15 20:28:33] 2025-12-16 01:27:49,311 | INFO     | sum of square deviations: 12405855540.16368
[2025-12-15 20:28:33] 2025-12-16 01:27:49,316 | INFO     | sum of deviations: 162539001924.5322
[2025-12-15 20:28:33] 2025-12-16 01:27:49,316 | INFO     | mean x: 1765837702.2748537
[2025-12-15 20:28:33] 2025-12-16 01:27:49,316 | INFO     | mean y: 2482381.143274854
[2025-12-15 20:28:33] 2025-12-16 01:27:49,316 | INFO     | intersect: -23133164875.045647
[2025-12-15 20:28:33] 2025-12-16 01:27:49,317 | INFO     | chi2: 3.5645886845199404
[2025-12-15 20:28:33] 2025-12-16 01:27:49,317 | INFO     | current chi2=3.5645886845199404 (change=16.062821666932244 %)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,317 | INFO     | right removable region: 341
[2025-12-15 20:28:33] 2025-12-16 01:27:49,318 | INFO     | sum of square deviations: 12405609583.052626
[2025-12-15 20:28:33] 2025-12-16 01:27:49,321 | INFO     | sum of deviations: 43515935868.91233
[2025-12-15 20:28:33] 2025-12-16 01:27:49,322 | INFO     | mean x: 1765838007.2807016
[2025-12-15 20:28:33] 2025-12-16 01:27:49,322 | INFO     | mean y: 2504401.5321637425
[2025-12-15 20:28:33] 2025-12-16 01:27:49,322 | INFO     | intersect: -6191636480.08073
[2025-12-15 20:28:33] 2025-12-16 01:27:49,322 | INFO     | chi2: 1.1874358805073828
[2025-12-15 20:28:33] 2025-12-16 01:27:49,323 | INFO     | current chi2=1.1874358805073828 (change=72.03884484791419 %)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,323 | INFO     | sum of square deviations: 11869373670.278944
[2025-12-15 20:28:33] 2025-12-16 01:27:49,326 | INFO     | sum of deviations: 9078155794.011887
[2025-12-15 20:28:33] 2025-12-16 01:27:49,327 | INFO     | mean x: 1765838159.7982197
[2025-12-15 20:28:33] 2025-12-16 01:27:49,327 | INFO     | mean y: 2514156.353115727
[2025-12-15 20:28:33] 2025-12-16 01:27:49,328 | INFO     | intersect: -1348067126.785707
[2025-12-15 20:28:33] 2025-12-16 01:27:49,328 | INFO     | chi2: 0.7484341775069956
[2025-12-15 20:28:33] 2025-12-16 01:27:49,328 | INFO     | current chi2=0.7484341775069956 (change=36.97056070200649 %)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,329 | INFO     | sum of square deviations: 11348853953.045153
[2025-12-15 20:28:33] 2025-12-16 01:27:49,332 | INFO     | sum of deviations: 2544226655.1626587
[2025-12-15 20:28:33] 2025-12-16 01:27:49,333 | INFO     | mean x: 1765838312.310241
[2025-12-15 20:28:33] 2025-12-16 01:27:49,333 | INFO     | mean y: 2516059.7168674697
[2025-12-15 20:28:33] 2025-12-16 01:27:49,333 | INFO     | intersect: -393355886.6025817
[2025-12-15 20:28:33] 2025-12-16 01:27:49,333 | INFO     | chi2: 0.7319430275529579
[2025-12-15 20:28:33] 2025-12-16 01:27:49,333 | INFO     | current chi2=0.7319430275529579 (change=2.2034202137813947 %)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,334 | INFO     | left removable region: 30
[2025-12-15 20:28:33] 2025-12-16 01:27:49,335 | INFO     | sum of square deviations: 9328747179.356897
[2025-12-15 20:28:33] 2025-12-16 01:27:49,337 | INFO     | sum of deviations: 20493636396.655914
[2025-12-15 20:28:33] 2025-12-16 01:27:49,337 | INFO     | mean x: 1765838586.8778136
[2025-12-15 20:28:33] 2025-12-16 01:27:49,337 | INFO     | mean y: 2523201.964630225
[2025-12-15 20:28:33] 2025-12-16 01:27:49,338 | INFO     | intersect: -3876717304.7068515
[2025-12-15 20:28:33] 2025-12-16 01:27:49,339 | INFO     | chi2: 0.0059011553958714285
[2025-12-15 20:28:33] 2025-12-16 01:27:49,339 | INFO     | current memory leak: 2.20 B/s (using 311 data points, chi2=0.01)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,340 | INFO     | could have reported an average CPU frequency of 2600 MHz (15 samples)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,340 | INFO     | ..............................
[2025-12-15 20:28:33] 2025-12-16 01:27:49,340 | INFO     | . Timing measurements:
[2025-12-15 20:28:33] 2025-12-16 01:27:49,340 | INFO     | . get job = 0 s
[2025-12-15 20:28:33] 2025-12-16 01:27:49,340 | INFO     | . initial setup = 5 s
[2025-12-15 20:28:33] 2025-12-16 01:27:49,340 | INFO     | . payload setup = 34 s
[2025-12-15 20:28:33] 2025-12-16 01:27:49,340 | INFO     | . stage-in = 0 s
[2025-12-15 20:28:33] 2025-12-16 01:27:49,340 | INFO     | . payload execution = 21162 s
[2025-12-15 20:28:33] 2025-12-16 01:27:49,341 | INFO     | . stage-out = 9 s
[2025-12-15 20:28:33] 2025-12-16 01:27:49,341 | INFO     | . log creation = 0 s
[2025-12-15 20:28:33] 2025-12-16 01:27:49,341 | INFO     | ..............................
[2025-12-15 20:28:33] 2025-12-16 01:27:49,342 | INFO     | time since job start (21306s) is within the limit (174528.0s)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,510 | INFO     | 
[2025-12-15 20:28:33] 2025-12-16 01:27:49,510 | INFO     | job summary report
[2025-12-15 20:28:33] 2025-12-16 01:27:49,510 | INFO     | --------------------------------------------------
[2025-12-15 20:28:33] 2025-12-16 01:27:49,510 | INFO     | PanDA job id: 6931295620
[2025-12-15 20:28:33] 2025-12-16 01:27:49,510 | INFO     | task id: 47899050
[2025-12-15 20:28:33] 2025-12-16 01:27:49,510 | INFO     | errors: (none)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 20:28:33] 2025-12-16 01:27:49,511 | INFO     | pilot state: finished 
[2025-12-15 20:28:33] 2025-12-16 01:27:49,511 | INFO     | transexitcode: 0
[2025-12-15 20:28:33] 2025-12-16 01:27:49,511 | INFO     | exeerrorcode: 0
[2025-12-15 20:28:33] 2025-12-16 01:27:49,511 | INFO     | exeerrordiag: 
[2025-12-15 20:28:33] 2025-12-16 01:27:49,511 | INFO     | exitcode: 0
[2025-12-15 20:28:33] 2025-12-16 01:27:49,511 | INFO     | exitmsg: OK
[2025-12-15 20:28:33] 2025-12-16 01:27:49,511 | INFO     | cpuconsumptiontime: 44972 s
[2025-12-15 20:28:33] 2025-12-16 01:27:49,511 | INFO     | nevents: 400
[2025-12-15 20:28:33] 2025-12-16 01:27:49,511 | INFO     | neventsw: 0
[2025-12-15 20:28:33] 2025-12-16 01:27:49,512 | INFO     | pid: 3485035
[2025-12-15 20:28:33] 2025-12-16 01:27:49,512 | INFO     | pgrp: 3485035
[2025-12-15 20:28:33] 2025-12-16 01:27:49,512 | INFO     | corecount: 8
[2025-12-15 20:28:33] 2025-12-16 01:27:49,512 | INFO     | event service: False
[2025-12-15 20:28:33] 2025-12-16 01:27:49,512 | INFO     | sizes: {0: 2283701, 1: 2283757, 3: 2283984, 4: 2284012, 15: 2284012, 26: 2284430, 37: 2284458, 21202: 2317607, 21212: 2326605, 21215: 2326661, 21239: 2326855}
[2025-12-15 20:28:33] 2025-12-16 01:27:49,512 | INFO     | --------------------------------------------------
[2025-12-15 20:28:33] 2025-12-16 01:27:49,512 | INFO     | 
[2025-12-15 20:28:33] 2025-12-16 01:27:49,512 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-15 20:28:33] 2025-12-16 01:27:49,655 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,655 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,655 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,655 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,657 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,657 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,657 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 20:28:33] 2025-12-16 01:27:49,657 | INFO     | job 6931295620 has completed (purged errors)
[2025-12-15 20:28:33] 2025-12-16 01:27:49,657 | INFO     | overall cleanup function is called
[2025-12-15 20:28:33] 2025-12-16 01:27:50,676 | INFO     | --- collectZombieJob: --- 10, [3485035]
[2025-12-15 20:28:33] 2025-12-16 01:27:50,677 | INFO     | zombie collector waiting for pid 3485035
[2025-12-15 20:28:33] 2025-12-16 01:27:50,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 20:28:33] 2025-12-16 01:27:50,677 | INFO     | collected zombie processes
[2025-12-15 20:28:33] 2025-12-16 01:27:50,678 | INFO     | will attempt to kill all subprocesses of pid=3485035
[2025-12-15 20:28:33] 2025-12-16 01:27:52,889 | INFO     | process IDs to be killed: [3485035] (in reverse order)
[2025-12-15 20:28:33] 2025-12-16 01:27:53,334 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 20:28:33] 2025-12-16 01:27:53,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 20:28:33] 2025-12-16 01:27:53,364 | INFO     | did not find any defunct processes belonging to 3485035
[2025-12-15 20:28:33] 2025-12-16 01:27:53,496 | INFO     | did not find any defunct processes belonging to 3485035
[2025-12-15 20:28:33] 2025-12-16 01:27:53,496 | INFO     | ready for new job
[2025-12-15 20:28:33] 2025-12-16 01:27:53,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 20:28:33] 2025-12-16 01:27:53,499 | INFO     | ***************************************
[2025-12-15 20:28:33] 2025-12-16 01:27:53,499 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 20:28:33] 2025-12-16 01:27:53,499 | INFO     | ***************************************
[2025-12-15 20:28:33] 2025-12-16 01:27:53,499 | INFO     | 
[2025-12-15 20:28:33] 2025-12-16 01:27:53,558 | INFO     | architecture information:
[2025-12-15 20:28:33] 2025-12-16 01:27:53,584 | INFO     | executing command: cat /etc/os-release
[2025-12-15 20:28:33] 2025-12-16 01:27:53,753 | INFO     | cat /etc/os-release:
[2025-12-15 20:28:33] NAME="CentOS Linux"
[2025-12-15 20:28:33] VERSION="7 (Core)"
[2025-12-15 20:28:33] ID="centos"
[2025-12-15 20:28:33] ID_LIKE="rhel fedora"
[2025-12-15 20:28:33] VERSION_ID="7"
[2025-12-15 20:28:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 20:28:33] ANSI_COLOR="0;31"
[2025-12-15 20:28:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 20:28:33] HOME_URL="https://www.centos.org/"
[2025-12-15 20:28:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 20:28:33] 
[2025-12-15 20:28:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 20:28:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 20:28:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 20:28:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 20:28:33] 
[2025-12-15 20:28:33] 2025-12-16 01:27:53,753 | INFO     | ***************************************
[2025-12-15 20:28:33] 2025-12-16 01:27:54,257 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-15 20:28:33] 2025-12-16 01:27:54,392 | INFO     | sufficient remaining disk space (75934728192 B)
[2025-12-15 20:28:33] 2025-12-16 01:27:54,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 20:28:33] 2025-12-16 01:27:54,393 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 20:28:33] 2025-12-16 01:27:54,393 | INFO     | update_server=False
[2025-12-15 20:28:33] 2025-12-16 01:27:54,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 20:28:33] 2025-12-16 01:27:54,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 20:28:33] 2025-12-16 01:27:54,504 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 20:28:33] 2025-12-16 01:27:54,969 | INFO     | all job control threads have been joined
[2025-12-15 20:28:33] 2025-12-16 01:27:55,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 20:28:33] 2025-12-16 01:27:55,323 | INFO     | aborting loop
[2025-12-15 20:28:33] 2025-12-16 01:27:55,399 | INFO     | [job] retrieve thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:55,476 | INFO     | all data control threads have been joined
[2025-12-15 20:28:33] 2025-12-16 01:27:55,510 | INFO     | [job] queue monitor thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:55,519 | INFO     | [payload] validate_post thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:55,552 | INFO     | [payload] failed_post thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:55,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 20:28:33] 2025-12-16 01:27:55,880 | INFO     | all payload control threads have been joined
[2025-12-15 20:28:33] 2025-12-16 01:27:55,995 | INFO     | [job] control thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:56,234 | INFO     | [data] copytool_in thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:56,235 | INFO     | [job] validate thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:56,329 | INFO     | [job] job monitor thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:56,482 | INFO     | [data] control thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:56,536 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:56,543 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:56,793 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:56,857 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:56,887 | INFO     | [payload] control thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:57,689 | INFO     | [data] copytool_out thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:27:58,403 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 20:28:33] 2025-12-16 01:28:24,413 | INFO     | PID=3475562 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 20:28:33] 2025-12-16 01:28:24,414 | INFO     | .. there are 25 such processes running
[2025-12-15 20:28:33] 2025-12-16 01:28:24,414 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 20:28:33] 2025-12-16 01:28:24,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 20:28:33] 2025-12-16 01:28:24,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 20:28:33] 2025-12-16 01:28:24,531 | INFO     | [monitor] cgroup control has ended
[2025-12-15 20:28:33] 2025-12-16 01:28:24,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656000649024)>', '<ExcThread(monitor, started 139655123023616)>']
[2025-12-15 20:28:33] 2025-12-16 01:28:25,448 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 20:28:33] 2025-12-16 01:28:25,449 | INFO     | [monitor] control thread has ended
[2025-12-15 20:28:33] 2025-12-16 01:28:29,769 | INFO     | all workflow threads have been joined
[2025-12-15 20:28:33] 2025-12-16 01:28:29,769 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 20:28:33] 2025-12-16 01:28:29,774 | INFO     | traces error code: 0
[2025-12-15 20:28:33] 2025-12-16 01:28:29,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 20:28:33] 2025-12-16 01:28:32,050 [wrapper] ==== pilot stdout END ====
[2025-12-15 20:28:33] 2025-12-16 01:28:32,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 20:28:33] 2025-12-16 01:28:32,160 [wrapper] pilotpid: 3475562
[2025-12-15 20:28:33] 2025-12-16 01:28:32,211 [wrapper] Pilot exit status: 0
[2025-12-15 20:28:33] 2025-12-16 01:28:32,420 [wrapper] pandaids: 6931295620
[2025-12-15 20:28:33] 2025-12-16 01:28:32,682 [wrapper] cleanup supervisor_pilot  297265 3475563
[2025-12-15 20:28:33] 2025-12-16 01:28:32,686 [wrapper] Test setup, not cleaning
[2025-12-15 20:28:33] 2025-12-16 01:28:32,689 [wrapper] apfmon messages muted
[2025-12-15 20:28:33] 2025-12-16 01:28:32,692 [wrapper] ==== wrapper stdout END ====
[2025-12-15 20:28:33] 2025-12-16 01:28:32,695 [wrapper] ==== wrapper stderr END ====
[2025-12-15 20:28:33]  *** Error codes and diagnostics ***
[2025-12-15 20:28:33]     "exeErrorCode": 0,
[2025-12-15 20:28:33]     "exeErrorDiag": "",
[2025-12-15 20:28:33]     "pilotErrorCode": 0,
[2025-12-15 20:28:33]     "pilotErrorDiag": "",
[2025-12-15 20:28:33]  *** Listing of results directory ***
[2025-12-15 20:28:33] total 370932
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 22:37 pilot3.tar.gz
[2025-12-15 20:28:33] -rwx------. 1 boincer umatlas     36322 Dec 14 22:41 runpilot2-wrapper.sh
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 22:42 queuedata.json
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas       100 Dec 15 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 20:28:33] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 14:31 run_atlas
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas       105 Dec 15 14:31 job.xml
[2025-12-15 20:28:33] -rw-r--r--. 2 boincer umatlas 198395220 Dec 15 14:31 EVNT.47899048._000023.pool.root.1
[2025-12-15 20:28:33] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 14:31 start_atlas.sh
[2025-12-15 20:28:33] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 14:31 shared
[2025-12-15 20:28:33] -rw-r--r--. 2 boincer umatlas    592384 Dec 15 14:31 input.tar.gz
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas         0 Dec 15 14:31 boinc_lockfile
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas      2487 Dec 15 14:31 pandaJob.out
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas        57 Dec 15 14:31 setup.sh.local
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas    994497 Dec 15 14:32 agis_schedconf.cvmfs.json
[2025-12-15 20:28:33] drwx------. 5 boincer umatlas      4096 Dec 15 14:32 pilot3
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas      6660 Dec 15 20:22 init_data.xml
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas 171868034 Dec 15 20:26 HITS.47899050._000558.pool.root.1
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas       531 Dec 15 20:26 boinc_task_state.xml
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas      1041 Dec 15 20:27 memory_monitor_summary.json
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas   1516240 Dec 15 20:27 agis_ddmendpoints.agis.ALL.json
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas    511311 Dec 15 20:27 log.47899050._000558.job.log.tgz.1
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas        95 Dec 15 20:27 pilot_heartbeat.json
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas      7813 Dec 15 20:27 heartbeat.json
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas      4824 Dec 15 20:28 pilotlog.txt
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 20:28 boinc_mmap_file
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas        28 Dec 15 20:28 wrapper_checkpoint.txt
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas   2315475 Dec 15 20:28 log.47899050._000558.job.log.1
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas       357 Dec 15 20:28 output.list
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas       620 Dec 15 20:28 runtime_log
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas   2846720 Dec 15 20:28 result.tar.gz
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas      9333 Dec 15 20:28 runtime_log.err
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas       655 Dec 15 20:28 JvUKDmQdEp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmq8WKDmhUIbIo.diag
[2025-12-15 20:28:33] -rw-r--r--. 1 boincer umatlas     21208 Dec 15 20:28 stderr.txt
[2025-12-15 20:28:33] HITS file was successfully produced:
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas 171868034 Dec 15 20:26 shared/HITS.pool.root.1
[2025-12-15 20:28:33]  *** Contents of shared directory: ***
[2025-12-15 20:28:33] total 364968
[2025-12-15 20:28:33] -rw-r--r--. 2 boincer umatlas 198395220 Dec 15 14:31 ATLAS.root_0
[2025-12-15 20:28:33] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 14:31 start_atlas.sh
[2025-12-15 20:28:33] -rw-r--r--. 2 boincer umatlas    592384 Dec 15 14:31 input.tar.gz
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas 171868034 Dec 15 20:26 HITS.pool.root.1
[2025-12-15 20:28:33] -rw-------. 1 boincer umatlas   2846720 Dec 15 20:28 result.tar.gz
20:28:34 (3470767): run_atlas exited; CPU time 45581.814041
20:28:34 (3470767): called boinc_finish(0)

</stderr_txt>
]]>

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