Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:56:19 (2166386): wrapper (7.7.26015): starting
17:56:19 (2166386): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 17:56:19] Arguments: --nthreads 4
[2025-12-16 17:56:19] Threads: 4
[2025-12-16 17:56:19] Checking for CVMFS
[2025-12-16 17:56:19] No cvmfs_config command found, will try listing directly
[2025-12-16 17:56:19] CVMFS is ok
[2025-12-16 17:56:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 17:56:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 17:56:19] Further information can be found at the LHC@home message board.
[2025-12-16 17:56:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 17:56:19] Checking for apptainer binary...
[2025-12-16 17:56:19] which: no apptainer in ((null))
[2025-12-16 17:56:19] apptainer is not installed, using version from CVMFS
[2025-12-16 17:56:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 17:56:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-12-16 17:56:19] apptainer works
[2025-12-16 17:56:19] Set ATHENA_PROC_NUMBER=4
[2025-12-16 17:56:19] Set ATHENA_CORE_NUMBER=4
[2025-12-16 17:56:19] Starting ATLAS job with PandaID=6931295589
[2025-12-16 17:56:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 20:42:33]  *** The last 200 lines of the pilot log: ***
[2025-12-16 20:42:33] 2025-12-16 19:35:48,907 | INFO     | monitor loop #649: job 0:6931295589 is in state 'finished'
[2025-12-16 20:42:33] 2025-12-16 19:35:48,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 20:42:33] 2025-12-16 19:35:50,842 | INFO     | time since job start (9556s) is within the limit (174528.0s)
[2025-12-16 20:42:33] 2025-12-16 19:35:51,410 | INFO     | monitor loop #650: job 0:6931295589 is in state 'finished'
[2025-12-16 20:42:33] 2025-12-16 19:35:51,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 20:42:33] 2025-12-16 19:35:52,849 | INFO     | time since job start (9558s) is within the limit (174528.0s)
[2025-12-16 20:42:33] 2025-12-16 19:35:53,099 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 20:42:33] 2025-12-16 19:35:53,117 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2692.1711171875017
[2025-12-16 20:42:33] 2025-12-16 19:35:53,140 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6931295589/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 20:42:33] 2025-12-16 19:35:53,141 | INFO     | extracted standard info from prmon json
[2025-12-16 20:42:33] 2025-12-16 19:35:53,141 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 20:42:33] 2025-12-16 19:35:53,141 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 20:42:33] 2025-12-16 19:35:53,141 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 20:42:33] 2025-12-16 19:35:53,141 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 20:42:33] 2025-12-16 19:35:53,144 | INFO     | fitting pss+swap vs Time
[2025-12-16 20:42:33] 2025-12-16 19:35:53,144 | INFO     | sum of square deviations: 1177156955.0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,145 | INFO     | sum of deviations: 8569040025.999999
[2025-12-16 20:42:33] 2025-12-16 19:35:53,145 | INFO     | mean x: 1765908956.5
[2025-12-16 20:42:33] 2025-12-16 19:35:53,146 | INFO     | mean y: 2327649.487179487
[2025-12-16 20:42:33] 2025-12-16 19:35:53,146 | INFO     | intersect: -12852495546.558409
[2025-12-16 20:42:33] 2025-12-16 19:35:53,146 | INFO     | chi2: 1.34399599763283
[2025-12-16 20:42:33] 2025-12-16 19:35:53,146 | INFO     | sum of square deviations: 1067554900.0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,147 | INFO     | sum of deviations: 8411836133.000004
[2025-12-16 20:42:33] 2025-12-16 19:35:53,147 | INFO     | mean x: 1765908804.0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,147 | INFO     | mean y: 2327430.682119205
[2025-12-16 20:42:33] 2025-12-16 19:35:53,147 | INFO     | intersect: -13912212688.116474
[2025-12-16 20:42:33] 2025-12-16 19:35:53,147 | INFO     | chi2: 1.3452825503754502
[2025-12-16 20:42:33] 2025-12-16 19:35:53,148 | INFO     | current chi2=1.3452825503754502 (change=-0.09572593555979594 %)
[2025-12-16 20:42:33] 2025-12-16 19:35:53,148 | INFO     | right removable region: 150
[2025-12-16 20:42:33] 2025-12-16 19:35:53,148 | INFO     | sum of square deviations: 1067554900.0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,149 | INFO     | sum of deviations: -10610308950.999998
[2025-12-16 20:42:33] 2025-12-16 19:35:53,149 | INFO     | mean x: 1765909109.0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,149 | INFO     | mean y: 2353876.8013245035
[2025-12-16 20:42:33] 2025-12-16 19:35:53,149 | INFO     | intersect: 17553527334.83625
[2025-12-16 20:42:33] 2025-12-16 19:35:53,149 | INFO     | chi2: 0.030065330355448738
[2025-12-16 20:42:33] 2025-12-16 19:35:53,149 | INFO     | current chi2=0.030065330355448738 (change=97.76298959160573 %)
[2025-12-16 20:42:33] 2025-12-16 19:35:53,149 | INFO     | sum of square deviations: 964976232.5
[2025-12-16 20:42:33] 2025-12-16 19:35:53,150 | INFO     | sum of deviations: -9112339027.0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,150 | INFO     | mean x: 1765909261.5
[2025-12-16 20:42:33] 2025-12-16 19:35:53,150 | INFO     | mean y: 2351642.890410959
[2025-12-16 20:42:33] 2025-12-16 19:35:53,150 | INFO     | intersect: 16677958087.640022
[2025-12-16 20:42:33] 2025-12-16 19:35:53,151 | INFO     | chi2: 0.029543703955284703
[2025-12-16 20:42:33] 2025-12-16 19:35:53,151 | INFO     | current chi2=0.029543703955284703 (change=1.7349764462824213 %)
[2025-12-16 20:42:33] 2025-12-16 19:35:53,151 | INFO     | left removable region: 20
[2025-12-16 20:42:33] 2025-12-16 19:35:53,151 | INFO     | sum of square deviations: 681212772.5
[2025-12-16 20:42:33] 2025-12-16 19:35:53,152 | INFO     | sum of deviations: -4787552914.0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,152 | INFO     | mean x: 1765909383.5
[2025-12-16 20:42:33] 2025-12-16 19:35:53,152 | INFO     | mean y: 2345419.6461538463
[2025-12-16 20:42:33] 2025-12-16 19:35:53,152 | INFO     | intersect: 12413129474.396637
[2025-12-16 20:42:33] 2025-12-16 19:35:53,152 | INFO     | chi2: 0.022990331807585408
[2025-12-16 20:42:33] 2025-12-16 19:35:53,152 | INFO     | current memory leak: -7.03 B/s (using 130 data points, chi2=0.02)
[2025-12-16 20:42:33] 2025-12-16 19:35:53,152 | INFO     | could have reported an average CPU frequency of 2684 MHz (9 samples)
[2025-12-16 20:42:33] 2025-12-16 19:35:53,153 | INFO     | ..............................
[2025-12-16 20:42:33] 2025-12-16 19:35:53,153 | INFO     | . Timing measurements:
[2025-12-16 20:42:33] 2025-12-16 19:35:53,153 | INFO     | . get job = 0 s
[2025-12-16 20:42:33] 2025-12-16 19:35:53,153 | INFO     | . initial setup = 1 s
[2025-12-16 20:42:33] 2025-12-16 19:35:53,153 | INFO     | . payload setup = 9 s
[2025-12-16 20:42:33] 2025-12-16 19:35:53,153 | INFO     | . stage-in = 0 s
[2025-12-16 20:42:33] 2025-12-16 19:35:53,153 | INFO     | . payload execution = 9516 s
[2025-12-16 20:42:33] 2025-12-16 19:35:53,153 | INFO     | . stage-out = 0 s
[2025-12-16 20:42:33] 2025-12-16 19:35:53,153 | INFO     | . log creation = 0 s
[2025-12-16 20:42:33] 2025-12-16 19:35:53,153 | INFO     | ..............................
[2025-12-16 20:42:33] 2025-12-16 19:35:53,245 | INFO     | 
[2025-12-16 20:42:33] 2025-12-16 19:35:53,246 | INFO     | job summary report
[2025-12-16 20:42:33] 2025-12-16 19:35:53,246 | INFO     | --------------------------------------------------
[2025-12-16 20:42:33] 2025-12-16 19:35:53,246 | INFO     | PanDA job id: 6931295589
[2025-12-16 20:42:33] 2025-12-16 19:35:53,246 | INFO     | task id: 47899050
[2025-12-16 20:42:33] 2025-12-16 19:35:53,246 | INFO     | errors: (none)
[2025-12-16 20:42:33] 2025-12-16 19:35:53,246 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 20:42:33] 2025-12-16 19:35:53,246 | INFO     | pilot state: finished 
[2025-12-16 20:42:33] 2025-12-16 19:35:53,246 | INFO     | transexitcode: 0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,246 | INFO     | exeerrorcode: 0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,246 | INFO     | exeerrordiag: 
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | exitcode: 0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | exitmsg: OK
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | cpuconsumptiontime: 36408 s
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | nevents: 400
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | neventsw: 0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | pid: 2189048
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | pgrp: 2189048
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | corecount: 4
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | event service: False
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | sizes: {0: 2283938, 1: 2283938, 8: 2284228, 11: 2284256, 9529: 2312962, 9530: 2321984, 9532: 2322168, 9540: 2322426}
[2025-12-16 20:42:33] 2025-12-16 19:35:53,247 | INFO     | --------------------------------------------------
[2025-12-16 20:42:33] 2025-12-16 19:35:53,248 | INFO     | 
[2025-12-16 20:42:33] 2025-12-16 19:35:53,248 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-12-16 20:42:33] 2025-12-16 19:35:53,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,279 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,279 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,281 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 20:42:33] 2025-12-16 19:35:53,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,281 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 20:42:33] 2025-12-16 19:35:53,281 | INFO     | job 6931295589 has completed (purged errors)
[2025-12-16 20:42:33] 2025-12-16 19:35:53,282 | INFO     | overall cleanup function is called
[2025-12-16 20:42:33] 2025-12-16 19:35:54,288 | INFO     | --- collectZombieJob: --- 10, [2189048]
[2025-12-16 20:42:33] 2025-12-16 19:35:54,288 | INFO     | zombie collector waiting for pid 2189048
[2025-12-16 20:42:33] 2025-12-16 19:35:54,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 20:42:33] 2025-12-16 19:35:54,289 | INFO     | collected zombie processes
[2025-12-16 20:42:33] 2025-12-16 19:35:54,289 | INFO     | will attempt to kill all subprocesses of pid=2189048
[2025-12-16 20:42:33] 2025-12-16 19:35:55,923 | INFO     | PID=2174006 has CPU usage=24.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-16 20:42:33] 2025-12-16 19:35:55,923 | INFO     | .. there are 9 such processes running
[2025-12-16 20:42:33] 2025-12-16 19:35:56,130 | INFO     | process IDs to be killed: [2189048] (in reverse order)
[2025-12-16 20:42:33] 2025-12-16 19:35:56,356 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 20:42:33] 2025-12-16 19:35:56,357 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 20:42:33] 2025-12-16 19:35:56,385 | INFO     | did not find any defunct processes belonging to 2189048
[2025-12-16 20:42:33] 2025-12-16 19:35:56,410 | INFO     | did not find any defunct processes belonging to 2189048
[2025-12-16 20:42:33] 2025-12-16 19:35:56,410 | INFO     | ready for new job
[2025-12-16 20:42:33] 2025-12-16 19:35:56,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 20:42:33] 2025-12-16 19:35:56,413 | INFO     | ***************************************
[2025-12-16 20:42:33] 2025-12-16 19:35:56,413 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 20:42:33] 2025-12-16 19:35:56,413 | INFO     | ***************************************
[2025-12-16 20:42:33] 2025-12-16 19:35:56,413 | INFO     | 
[2025-12-16 20:42:33] 2025-12-16 19:35:56,421 | INFO     | architecture information:
[2025-12-16 20:42:33] 2025-12-16 19:35:56,421 | INFO     | executing command: cat /etc/os-release
[2025-12-16 20:42:33] 2025-12-16 19:35:56,446 | INFO     | cat /etc/os-release:
[2025-12-16 20:42:33] NAME="CentOS Linux"
[2025-12-16 20:42:33] VERSION="7 (Core)"
[2025-12-16 20:42:33] ID="centos"
[2025-12-16 20:42:33] ID_LIKE="rhel fedora"
[2025-12-16 20:42:33] VERSION_ID="7"
[2025-12-16 20:42:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 20:42:33] ANSI_COLOR="0;31"
[2025-12-16 20:42:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 20:42:33] HOME_URL="https://www.centos.org/"
[2025-12-16 20:42:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 20:42:33] 
[2025-12-16 20:42:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 20:42:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 20:42:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 20:42:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 20:42:33] 
[2025-12-16 20:42:33] 2025-12-16 19:35:56,446 | INFO     | ***************************************
[2025-12-16 20:42:33] 2025-12-16 19:35:56,949 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-12-16 20:42:33] 2025-12-16 19:35:56,973 | INFO     | sufficient remaining disk space (3332352507904 B)
[2025-12-16 20:42:33] 2025-12-16 19:35:56,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 20:42:33] 2025-12-16 19:35:56,974 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 20:42:33] 2025-12-16 19:35:56,974 | INFO     | update_server=False
[2025-12-16 20:42:33] 2025-12-16 19:35:56,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 20:42:33] 2025-12-16 19:35:57,415 | INFO     | all job control threads have been joined
[2025-12-16 20:42:33] 2025-12-16 19:35:57,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 20:42:33] 2025-12-16 19:35:57,426 | INFO     | aborting loop
[2025-12-16 20:42:33] 2025-12-16 19:35:57,980 | INFO     | [job] retrieve thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:58,053 | INFO     | all data control threads have been joined
[2025-12-16 20:42:33] 2025-12-16 19:35:58,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 20:42:33] 2025-12-16 19:35:58,375 | INFO     | [job] validate thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:58,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 20:42:33] 2025-12-16 19:35:58,414 | INFO     | all payload control threads have been joined
[2025-12-16 20:42:33] 2025-12-16 19:35:58,418 | INFO     | [job] control thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:58,431 | INFO     | [job] job monitor thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:58,438 | INFO     | [data] copytool_in thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:58,569 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:58,659 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:58,863 | INFO     | [payload] failed_post thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:58,997 | INFO     | [payload] validate_post thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:59,058 | INFO     | [data] control thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:59,259 | INFO     | [job] queue monitor thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:59,420 | INFO     | [payload] control thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:59,438 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:35:59,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 20:42:33] 2025-12-16 19:36:00,411 | INFO     | [data] copytool_out thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:36:03,950 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:36:07,687 | INFO     | job.realtimelogging is not enabled
[2025-12-16 20:42:33] 2025-12-16 19:36:08,695 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 20:42:33] 2025-12-16 19:36:29,013 | INFO     | PID=2174006 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 20:42:33] 2025-12-16 19:36:29,013 | INFO     | .. there are 9 such processes running
[2025-12-16 20:42:33] 2025-12-16 19:36:29,013 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 20:42:33] 2025-12-16 19:36:29,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 20:42:33] 2025-12-16 19:36:29,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 20:42:33] 2025-12-16 19:36:49,659 | INFO     | [monitor] cgroup control has ended
[2025-12-16 20:42:33] 2025-12-16 19:36:50,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23161743832896)>', '<ExcThread(monitor, started 23161506596608)>']
[2025-12-16 20:42:33] 2025-12-16 19:36:51,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 20:42:33] 2025-12-16 19:36:51,124 | INFO     | [monitor] control thread has ended
[2025-12-16 20:42:33] 2025-12-16 19:36:55,689 | INFO     | all workflow threads have been joined
[2025-12-16 20:42:33] 2025-12-16 19:36:55,689 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 20:42:33] 2025-12-16 19:36:55,690 | INFO     | traces error code: 0
[2025-12-16 20:42:33] 2025-12-16 19:36:55,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 20:42:33] 2025-12-16 19:36:55,906 [wrapper] ==== pilot stdout END ====
[2025-12-16 20:42:33] 2025-12-16 19:36:55,911 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 20:42:33] 2025-12-16 19:36:55,915 [wrapper] pilotpid: 2174006
[2025-12-16 20:42:33] 2025-12-16 19:36:55,918 [wrapper] Pilot exit status: 0
[2025-12-16 20:42:33] 2025-12-16 19:36:55,935 [wrapper] pandaids: 6931295589
[2025-12-16 20:42:33] 2025-12-16 19:36:56,115 [wrapper] cleanup supervisor_pilot 2456847 2174008
[2025-12-16 20:42:33] 2025-12-16 19:36:56,120 [wrapper] Test setup, not cleaning
[2025-12-16 20:42:33] 2025-12-16 19:36:56,124 [wrapper] apfmon messages muted
[2025-12-16 20:42:33] 2025-12-16 19:36:56,129 [wrapper] ==== wrapper stdout END ====
[2025-12-16 20:42:33] 2025-12-16 19:36:56,133 [wrapper] ==== wrapper stderr END ====
[2025-12-16 20:42:33]  *** Error codes and diagnostics ***
[2025-12-16 20:42:33]     "exeErrorCode": 0,
[2025-12-16 20:42:33]     "exeErrorDiag": "",
[2025-12-16 20:42:33]     "pilotErrorCode": 0,
[2025-12-16 20:42:33]     "pilotErrorDiag": "",
[2025-12-16 20:42:33]  *** Listing of results directory ***
[2025-12-16 20:42:33] total 371220
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc    579449 Dec 15 04:37 pilot3.tar.gz
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc      5112 Dec 15 04:37 queuedata.json
[2025-12-16 20:42:33] -rwx------ 1 boinc boinc     36322 Dec 15 04:38 runpilot2-wrapper.sh
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc       100 Dec 16 17:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 20:42:33] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 17:56 run_atlas
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc       105 Dec 16 17:56 job.xml
[2025-12-16 20:42:33] -rw-r--r-- 2 boinc boinc 198406137 Dec 16 17:56 EVNT.47899048._000022.pool.root.1
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc      6692 Dec 16 17:56 init_data.xml
[2025-12-16 20:42:33] -rw-r--r-- 2 boinc boinc     15847 Dec 16 17:56 start_atlas.sh
[2025-12-16 20:42:33] drwxrwx--x 2 boinc boinc      4096 Dec 16 17:56 shared
[2025-12-16 20:42:33] -rw-r--r-- 2 boinc boinc    592375 Dec 16 17:56 input.tar.gz
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc         0 Dec 16 17:56 boinc_lockfile
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc      2486 Dec 16 17:56 pandaJob.out
[2025-12-16 20:42:33] -rw------- 1 boinc boinc    987401 Dec 16 17:56 agis_schedconf.cvmfs.json
[2025-12-16 20:42:33] -rw------- 1 boinc boinc   1516240 Dec 16 17:56 agis_ddmendpoints.agis.ALL.json
[2025-12-16 20:42:33] drwx------ 5 boinc boinc      4096 Dec 16 17:56 pilot3
[2025-12-16 20:42:33] -rw------- 1 boinc boinc 174492510 Dec 16 20:35 HITS.47899050._000527.pool.root.1
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc       528 Dec 16 20:35 boinc_task_state.xml
[2025-12-16 20:42:33] -rw------- 1 boinc boinc      1027 Dec 16 20:35 memory_monitor_summary.json
[2025-12-16 20:42:33] -rw------- 1 boinc boinc    322968 Dec 16 20:35 log.47899050._000527.job.log.tgz.1
[2025-12-16 20:42:33] -rw------- 1 boinc boinc        95 Dec 16 20:35 pilot_heartbeat.json
[2025-12-16 20:42:33] -rw------- 1 boinc boinc      7775 Dec 16 20:35 heartbeat.json
[2025-12-16 20:42:33] -rw------- 1 boinc boinc      4907 Dec 16 20:36 pilotlog.txt
[2025-12-16 20:42:33] -rw------- 1 boinc boinc   1335709 Dec 16 20:36 log.47899050._000527.job.log.1
[2025-12-16 20:42:33] -rw------- 1 boinc boinc       357 Dec 16 20:36 output.list
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc       620 Dec 16 20:36 runtime_log
[2025-12-16 20:42:33] -rw------- 1 boinc boinc   1679360 Dec 16 20:36 result.tar.gz
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc      9222 Dec 16 20:36 runtime_log.err
[2025-12-16 20:42:33] -rw------- 1 boinc boinc       662 Dec 16 20:36 rieKDmaaEp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7iSKDmwFb5Cn.diag
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc        26 Dec 16 20:42 wrapper_checkpoint.txt
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc      8192 Dec 16 20:42 boinc_mmap_file
[2025-12-16 20:42:33] -rw-r--r-- 1 boinc boinc     21173 Dec 16 20:42 stderr.txt
[2025-12-16 20:42:33] HITS file was successfully produced:
[2025-12-16 20:42:33] -rw------- 1 boinc boinc 174492510 Dec 16 20:35 shared/HITS.pool.root.1
[2025-12-16 20:42:33]  *** Contents of shared directory: ***
[2025-12-16 20:42:33] total 366404
[2025-12-16 20:42:33] -rw-r--r-- 2 boinc boinc 198406137 Dec 16 17:56 ATLAS.root_0
[2025-12-16 20:42:33] -rw-r--r-- 2 boinc boinc     15847 Dec 16 17:56 start_atlas.sh
[2025-12-16 20:42:33] -rw-r--r-- 2 boinc boinc    592375 Dec 16 17:56 input.tar.gz
[2025-12-16 20:42:33] -rw------- 1 boinc boinc 174492510 Dec 16 20:35 HITS.pool.root.1
[2025-12-16 20:42:33] -rw------- 1 boinc boinc   1679360 Dec 16 20:36 result.tar.gz
20:42:34 (2166386): run_atlas exited; CPU time 37046.569264
20:42:34 (2166386): called boinc_finish(0)

</stderr_txt>
]]>

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