Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:06:52 (879746): wrapper (7.7.26015): starting
07:06:52 (879746): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 07:06:52] Arguments: --nthreads 4
[2025-12-16 07:06:52] Threads: 4
[2025-12-16 07:06:52] Checking for CVMFS
[2025-12-16 07:06:52] No cvmfs_config command found, will try listing directly
[2025-12-16 07:06:52] CVMFS is ok
[2025-12-16 07:06:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 07:06:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 07:06:52] Further information can be found at the LHC@home message board.
[2025-12-16 07:06:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 07:06:52] Checking for apptainer binary...
[2025-12-16 07:06:52] which: no apptainer in ((null))
[2025-12-16 07:06:52] apptainer is not installed, using version from CVMFS
[2025-12-16 07:06:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 07:06:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-12-16 07:06:52] apptainer works
[2025-12-16 07:06:52] Set ATHENA_PROC_NUMBER=4
[2025-12-16 07:06:52] Set ATHENA_CORE_NUMBER=4
[2025-12-16 07:06:52] Starting ATLAS job with PandaID=6931295732
[2025-12-16 07:06:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 10:50:21]  *** The last 200 lines of the pilot log: ***
[2025-12-16 10:50:21] 2025-12-16 08:59:46,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,329 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 10:50:21] 2025-12-16 08:59:48,338 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2596.7078437499995
[2025-12-16 10:50:21] 2025-12-16 08:59:48,350 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6931295732/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,351 | INFO     | extracted standard info from prmon json
[2025-12-16 10:50:21] 2025-12-16 08:59:48,351 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 10:50:21] 2025-12-16 08:59:48,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 10:50:21] 2025-12-16 08:59:48,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 10:50:21] 2025-12-16 08:59:48,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 10:50:21] 2025-12-16 08:59:48,356 | INFO     | fitting pss+swap vs Time
[2025-12-16 10:50:21] 2025-12-16 08:59:48,356 | INFO     | sum of square deviations: 1523386702.5
[2025-12-16 10:50:21] 2025-12-16 08:59:48,357 | INFO     | sum of deviations: 11926504517.5
[2025-12-16 10:50:21] 2025-12-16 08:59:48,357 | INFO     | mean x: 1765870406.5
[2025-12-16 10:50:21] 2025-12-16 08:59:48,357 | INFO     | mean y: 2327168.5235294118
[2025-12-16 10:50:21] 2025-12-16 08:59:48,357 | INFO     | intersect: -13822567945.684553
[2025-12-16 10:50:21] 2025-12-16 08:59:48,358 | INFO     | chi2: 1.9371151034828522
[2025-12-16 10:50:21] 2025-12-16 08:59:48,358 | INFO     | sum of square deviations: 1392881930.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,359 | INFO     | sum of deviations: 20978253068.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,359 | INFO     | mean x: 1765870254.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,359 | INFO     | mean y: 2337471.654545455
[2025-12-16 10:50:21] 2025-12-16 08:59:48,359 | INFO     | intersect: -26593508361.21188
[2025-12-16 10:50:21] 2025-12-16 08:59:48,359 | INFO     | chi2: 1.2770306014260986
[2025-12-16 10:50:21] 2025-12-16 08:59:48,359 | INFO     | current chi2=1.2770306014260986 (change=34.07564686630904 %)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,360 | INFO     | sum of square deviations: 1270051720.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,360 | INFO     | sum of deviations: 20009890725.5
[2025-12-16 10:50:21] 2025-12-16 08:59:48,361 | INFO     | mean x: 1765870101.5
[2025-12-16 10:50:21] 2025-12-16 08:59:48,361 | INFO     | mean y: 2336269.01875
[2025-12-16 10:50:21] 2025-12-16 08:59:48,361 | INFO     | intersect: -27819261237.61082
[2025-12-16 10:50:21] 2025-12-16 08:59:48,361 | INFO     | chi2: 1.2781428411967768
[2025-12-16 10:50:21] 2025-12-16 08:59:48,361 | INFO     | current chi2=1.2781428411967768 (change=-0.08709578058944954 %)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,361 | INFO     | right removable region: 159
[2025-12-16 10:50:21] 2025-12-16 08:59:48,362 | INFO     | sum of square deviations: 1392881930.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,363 | INFO     | sum of deviations: -6864602243.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,363 | INFO     | mean x: 1765870559.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,363 | INFO     | mean y: 2348707.496969697
[2025-12-16 10:50:21] 2025-12-16 08:59:48,363 | INFO     | intersect: 8705167474.166634
[2025-12-16 10:50:21] 2025-12-16 08:59:48,363 | INFO     | chi2: 0.6953190793703219
[2025-12-16 10:50:21] 2025-12-16 08:59:48,363 | INFO     | current chi2=0.6953190793703219 (change=64.10543296471299 %)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,363 | INFO     | sum of square deviations: 1270051720.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,364 | INFO     | sum of deviations: -4640317610.5
[2025-12-16 10:50:21] 2025-12-16 08:59:48,364 | INFO     | mean x: 1765870711.5
[2025-12-16 10:50:21] 2025-12-16 08:59:48,365 | INFO     | mean y: 2345987.25625
[2025-12-16 10:50:21] 2025-12-16 08:59:48,365 | INFO     | intersect: 6454209979.408959
[2025-12-16 10:50:21] 2025-12-16 08:59:48,365 | INFO     | chi2: 0.6810840767367847
[2025-12-16 10:50:21] 2025-12-16 08:59:48,365 | INFO     | current chi2=0.6810840767367847 (change=2.047261905487812 %)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,365 | INFO     | left removable region: 20
[2025-12-16 10:50:21] 2025-12-16 08:59:48,365 | INFO     | sum of square deviations: 832722590.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,366 | INFO     | sum of deviations: 2696222082.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,366 | INFO     | mean x: 1765870681.0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,366 | INFO     | mean y: 2358600.4388489206
[2025-12-16 10:50:21] 2025-12-16 08:59:48,366 | INFO     | intersect: -5715247216.00547
[2025-12-16 10:50:21] 2025-12-16 08:59:48,367 | INFO     | chi2: 0.0007804844811728935
[2025-12-16 10:50:21] 2025-12-16 08:59:48,367 | INFO     | current memory leak: 3.24 B/s (using 139 data points, chi2=0.00)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,367 | INFO     | could have reported an average CPU frequency of 2596 MHz (9 samples)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,367 | INFO     | ..............................
[2025-12-16 10:50:21] 2025-12-16 08:59:48,368 | INFO     | . Timing measurements:
[2025-12-16 10:50:21] 2025-12-16 08:59:48,368 | INFO     | . get job = 0 s
[2025-12-16 10:50:21] 2025-12-16 08:59:48,368 | INFO     | . initial setup = 1 s
[2025-12-16 10:50:21] 2025-12-16 08:59:48,368 | INFO     | . payload setup = 5 s
[2025-12-16 10:50:21] 2025-12-16 08:59:48,368 | INFO     | . stage-in = 0 s
[2025-12-16 10:50:21] 2025-12-16 08:59:48,368 | INFO     | . payload execution = 10328 s
[2025-12-16 10:50:21] 2025-12-16 08:59:48,368 | INFO     | . stage-out = 0 s
[2025-12-16 10:50:21] 2025-12-16 08:59:48,368 | INFO     | . log creation = 0 s
[2025-12-16 10:50:21] 2025-12-16 08:59:48,368 | INFO     | ..............................
[2025-12-16 10:50:21] 2025-12-16 08:59:48,491 | INFO     | time since job start (10362s) is within the limit (174528.0s)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,547 | INFO     | 
[2025-12-16 10:50:21] 2025-12-16 08:59:48,547 | INFO     | job summary report
[2025-12-16 10:50:21] 2025-12-16 08:59:48,547 | INFO     | --------------------------------------------------
[2025-12-16 10:50:21] 2025-12-16 08:59:48,547 | INFO     | PanDA job id: 6931295732
[2025-12-16 10:50:21] 2025-12-16 08:59:48,547 | INFO     | task id: 47899050
[2025-12-16 10:50:21] 2025-12-16 08:59:48,547 | INFO     | errors: (none)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,547 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 10:50:21] 2025-12-16 08:59:48,547 | INFO     | pilot state: finished 
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | transexitcode: 0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | exeerrorcode: 0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | exeerrordiag: 
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | exitcode: 0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | exitmsg: OK
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | cpuconsumptiontime: 39902 s
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | nevents: 400
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | neventsw: 0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | pid: 901646
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | pgrp: 901646
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | corecount: 4
[2025-12-16 10:50:21] 2025-12-16 08:59:48,548 | INFO     | event service: False
[2025-12-16 10:50:21] 2025-12-16 08:59:48,549 | INFO     | sizes: {0: 2283768, 1: 2283967, 5: 2284229, 12: 2284285, 10338: 2313045, 10339: 2322065, 10340: 2322277, 10347: 2322535}
[2025-12-16 10:50:21] 2025-12-16 08:59:48,549 | INFO     | --------------------------------------------------
[2025-12-16 10:50:21] 2025-12-16 08:59:48,549 | INFO     | 
[2025-12-16 10:50:21] 2025-12-16 08:59:48,549 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-12-16 10:50:21] 2025-12-16 08:59:48,569 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,569 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,571 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 10:50:21] 2025-12-16 08:59:48,571 | INFO     | job 6931295732 has completed (purged errors)
[2025-12-16 10:50:21] 2025-12-16 08:59:48,572 | INFO     | overall cleanup function is called
[2025-12-16 10:50:21] 2025-12-16 08:59:49,579 | INFO     | --- collectZombieJob: --- 10, [901646]
[2025-12-16 10:50:21] 2025-12-16 08:59:49,579 | INFO     | zombie collector waiting for pid 901646
[2025-12-16 10:50:21] 2025-12-16 08:59:49,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 10:50:21] 2025-12-16 08:59:49,579 | INFO     | collected zombie processes
[2025-12-16 10:50:21] 2025-12-16 08:59:49,579 | INFO     | will attempt to kill all subprocesses of pid=901646
[2025-12-16 10:50:21] 2025-12-16 08:59:49,993 | INFO     | process IDs to be killed: [901646] (in reverse order)
[2025-12-16 10:50:21] 2025-12-16 08:59:50,106 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 10:50:21] 2025-12-16 08:59:50,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 10:50:21] 2025-12-16 08:59:50,122 | INFO     | did not find any defunct processes belonging to 901646
[2025-12-16 10:50:21] 2025-12-16 08:59:50,136 | INFO     | did not find any defunct processes belonging to 901646
[2025-12-16 10:50:21] 2025-12-16 08:59:50,137 | INFO     | ready for new job
[2025-12-16 10:50:21] 2025-12-16 08:59:50,137 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 10:50:21] 2025-12-16 08:59:50,139 | INFO     | ***************************************
[2025-12-16 10:50:21] 2025-12-16 08:59:50,139 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 10:50:21] 2025-12-16 08:59:50,139 | INFO     | ***************************************
[2025-12-16 10:50:21] 2025-12-16 08:59:50,139 | INFO     | 
[2025-12-16 10:50:21] 2025-12-16 08:59:50,143 | INFO     | architecture information:
[2025-12-16 10:50:21] 2025-12-16 08:59:50,144 | INFO     | executing command: cat /etc/os-release
[2025-12-16 10:50:21] 2025-12-16 08:59:50,158 | INFO     | cat /etc/os-release:
[2025-12-16 10:50:21] NAME="CentOS Linux"
[2025-12-16 10:50:21] VERSION="7 (Core)"
[2025-12-16 10:50:21] ID="centos"
[2025-12-16 10:50:21] ID_LIKE="rhel fedora"
[2025-12-16 10:50:21] VERSION_ID="7"
[2025-12-16 10:50:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 10:50:21] ANSI_COLOR="0;31"
[2025-12-16 10:50:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 10:50:21] HOME_URL="https://www.centos.org/"
[2025-12-16 10:50:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 10:50:21] 
[2025-12-16 10:50:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 10:50:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 10:50:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 10:50:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 10:50:21] 
[2025-12-16 10:50:21] 2025-12-16 08:59:50,159 | INFO     | ***************************************
[2025-12-16 10:50:21] 2025-12-16 08:59:50,662 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-12-16 10:50:21] 2025-12-16 08:59:50,679 | INFO     | sufficient remaining disk space (637914841088 B)
[2025-12-16 10:50:21] 2025-12-16 08:59:50,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 10:50:21] 2025-12-16 08:59:50,680 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 10:50:21] 2025-12-16 08:59:50,680 | INFO     | update_server=False
[2025-12-16 10:50:21] 2025-12-16 08:59:50,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 10:50:21] 2025-12-16 08:59:50,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 10:50:21] 2025-12-16 08:59:50,681 | INFO     | aborting loop
[2025-12-16 10:50:21] 2025-12-16 08:59:50,875 | INFO     | all job control threads have been joined
[2025-12-16 10:50:21] 2025-12-16 08:59:51,191 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 10:50:21] 2025-12-16 08:59:51,686 | INFO     | [job] retrieve thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:51,686 | INFO     | [job] job monitor thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:51,687 | INFO     | all data control threads have been joined
[2025-12-16 10:50:21] 2025-12-16 08:59:51,710 | INFO     | all payload control threads have been joined
[2025-12-16 10:50:21] 2025-12-16 08:59:51,747 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:51,802 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:51,804 | INFO     | [data] copytool_in thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:51,844 | INFO     | [payload] failed_post thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:51,881 | INFO     | [job] control thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:51,891 | INFO     | [payload] validate_post thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:52,640 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:52,692 | INFO     | [data] control thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:52,715 | INFO     | [payload] control thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:52,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 10:50:21] 2025-12-16 08:59:52,908 | INFO     | [job] validate thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:52,978 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:53,196 | INFO     | [data] copytool_out thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:53,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 10:50:21] 2025-12-16 08:59:54,483 | INFO     | [job] queue monitor thread has finished
[2025-12-16 10:50:21] 2025-12-16 08:59:56,738 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 10:50:21] 2025-12-16 09:00:22,062 | INFO     | PID=887754 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 10:50:21] 2025-12-16 09:00:22,063 | INFO     | .. there are 4 such processes running
[2025-12-16 10:50:21] 2025-12-16 09:00:22,064 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 10:50:21] 2025-12-16 09:00:22,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 10:50:21] 2025-12-16 09:00:22,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 10:50:21] 2025-12-16 09:00:22,459 | INFO     | [monitor] cgroup control has ended
[2025-12-16 10:50:21] 2025-12-16 09:00:24,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22497246414656)>', '<ExcThread(monitor, started 22497005102848)>']
[2025-12-16 10:50:21] 2025-12-16 09:00:25,079 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 10:50:21] 2025-12-16 09:00:25,079 | INFO     | [monitor] control thread has ended
[2025-12-16 10:50:21] 2025-12-16 09:00:29,450 | INFO     | all workflow threads have been joined
[2025-12-16 10:50:21] 2025-12-16 09:00:29,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 10:50:21] 2025-12-16 09:00:29,450 | INFO     | traces error code: 0
[2025-12-16 10:50:21] 2025-12-16 09:00:29,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 10:50:21] 2025-12-16 09:00:29,685 [wrapper] ==== pilot stdout END ====
[2025-12-16 10:50:21] 2025-12-16 09:00:29,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 10:50:21] 2025-12-16 09:00:29,692 [wrapper] pilotpid: 887754
[2025-12-16 10:50:21] 2025-12-16 09:00:29,695 [wrapper] Pilot exit status: 0
[2025-12-16 10:50:21] 2025-12-16 09:00:29,706 [wrapper] pandaids: 6931295732
[2025-12-16 10:50:21] 2025-12-16 09:00:29,782 [wrapper] cleanup supervisor_pilot 1044276 887755
[2025-12-16 10:50:21] 2025-12-16 09:00:29,785 [wrapper] Test setup, not cleaning
[2025-12-16 10:50:21] 2025-12-16 09:00:29,789 [wrapper] apfmon messages muted
[2025-12-16 10:50:21] 2025-12-16 09:00:29,791 [wrapper] ==== wrapper stdout END ====
[2025-12-16 10:50:21] 2025-12-16 09:00:29,794 [wrapper] ==== wrapper stderr END ====
[2025-12-16 10:50:21]  *** Error codes and diagnostics ***
[2025-12-16 10:50:21]     "exeErrorCode": 0,
[2025-12-16 10:50:21]     "exeErrorDiag": "",
[2025-12-16 10:50:21]     "pilotErrorCode": 0,
[2025-12-16 10:50:21]     "pilotErrorDiag": "",
[2025-12-16 10:50:21]  *** Listing of results directory ***
[2025-12-16 10:50:21] total 381148
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc    579449 Dec 15 04:37 pilot3.tar.gz
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc      5112 Dec 15 04:37 queuedata.json
[2025-12-16 10:50:21] -rwx------ 1 boinc boinc     36322 Dec 15 04:38 runpilot2-wrapper.sh
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc       100 Dec 16 07:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 10:50:21] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 07:06 run_atlas
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc       105 Dec 16 07:06 job.xml
[2025-12-16 10:50:21] -rw-r--r-- 2 boinc boinc 196503453 Dec 16 07:06 EVNT.47899048._000027.pool.root.1
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc      6638 Dec 16 07:06 init_data.xml
[2025-12-16 10:50:21] -rw-r--r-- 2 boinc boinc     15847 Dec 16 07:06 start_atlas.sh
[2025-12-16 10:50:21] drwxrwx--x 2 boinc boinc      4096 Dec 16 07:06 shared
[2025-12-16 10:50:21] -rw-r--r-- 2 boinc boinc    592379 Dec 16 07:06 input.tar.gz
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc         0 Dec 16 07:06 boinc_lockfile
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc      2487 Dec 16 07:06 pandaJob.out
[2025-12-16 10:50:21] -rw------- 1 boinc boinc    994531 Dec 16 07:07 agis_schedconf.cvmfs.json
[2025-12-16 10:50:21] -rw------- 1 boinc boinc   1516240 Dec 16 07:07 agis_ddmendpoints.agis.ALL.json
[2025-12-16 10:50:21] drwx------ 5 boinc boinc      4096 Dec 16 07:07 pilot3
[2025-12-16 10:50:21] -rw------- 1 boinc boinc 186204229 Dec 16 09:59 HITS.47899050._000670.pool.root.1
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc       528 Dec 16 09:59 boinc_task_state.xml
[2025-12-16 10:50:21] -rw------- 1 boinc boinc      1033 Dec 16 09:59 memory_monitor_summary.json
[2025-12-16 10:50:21] -rw------- 1 boinc boinc    359615 Dec 16 09:59 log.47899050._000670.job.log.tgz.1
[2025-12-16 10:50:21] -rw------- 1 boinc boinc      7823 Dec 16 09:59 heartbeat.json
[2025-12-16 10:50:21] -rw------- 1 boinc boinc        95 Dec 16 10:00 pilot_heartbeat.json
[2025-12-16 10:50:21] -rw------- 1 boinc boinc      4832 Dec 16 10:00 pilotlog.txt
[2025-12-16 10:50:21] -rw------- 1 boinc boinc   1474420 Dec 16 10:00 log.47899050._000670.job.log.1
[2025-12-16 10:50:21] -rw------- 1 boinc boinc       357 Dec 16 10:00 output.list
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc       620 Dec 16 10:00 runtime_log
[2025-12-16 10:50:21] -rw------- 1 boinc boinc   1853440 Dec 16 10:00 result.tar.gz
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc      9206 Dec 16 10:00 runtime_log.err
[2025-12-16 10:50:21] -rw------- 1 boinc boinc       666 Dec 16 10:00 F8uKDmbaEp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm83WKDmgWektn.diag
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc        26 Dec 16 10:50 wrapper_checkpoint.txt
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc      8192 Dec 16 10:50 boinc_mmap_file
[2025-12-16 10:50:21] -rw-r--r-- 1 boinc boinc     20868 Dec 16 10:50 stderr.txt
[2025-12-16 10:50:21] HITS file was successfully produced:
[2025-12-16 10:50:21] -rw------- 1 boinc boinc 186204229 Dec 16 09:59 shared/HITS.pool.root.1
[2025-12-16 10:50:21]  *** Contents of shared directory: ***
[2025-12-16 10:50:21] total 376160
[2025-12-16 10:50:21] -rw-r--r-- 2 boinc boinc 196503453 Dec 16 07:06 ATLAS.root_0
[2025-12-16 10:50:21] -rw-r--r-- 2 boinc boinc     15847 Dec 16 07:06 start_atlas.sh
[2025-12-16 10:50:21] -rw-r--r-- 2 boinc boinc    592379 Dec 16 07:06 input.tar.gz
[2025-12-16 10:50:21] -rw------- 1 boinc boinc 186204229 Dec 16 09:59 HITS.pool.root.1
[2025-12-16 10:50:21] -rw------- 1 boinc boinc   1853440 Dec 16 10:00 result.tar.gz
10:50:23 (879746): run_atlas exited; CPU time 40364.927616
10:50:23 (879746): called boinc_finish(0)

</stderr_txt>
]]>

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