Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:13:23 (1531568): wrapper (7.7.26015): starting
15:13:23 (1531568): wrapper: running run_atlas (--nthreads 4)
[2025-12-15 15:13:23] Arguments: --nthreads 4
[2025-12-15 15:13:23] Threads: 4
[2025-12-15 15:13:23] Checking for CVMFS
[2025-12-15 15:13:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 15:13:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 15:13:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 15:13:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 15:13:24] 2.9.2.0 1367876 39 56468 154034 0 186 19411162 36864000 0 130560 0 433956 100.000 73 14 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-15 15:13:24] CVMFS is ok
[2025-12-15 15:13:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 15:13:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 15:13:24] Further information can be found at the LHC@home message board.
[2025-12-15 15:13:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 15:13:24] Checking for apptainer binary...
[2025-12-15 15:13:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 15:13:24] Running /usr/bin/apptainer --version
[2025-12-15 15:13:24] apptainer version 1.4.1-1.1
[2025-12-15 15:13:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 15:13:24] thA325
[2025-12-15 15:13:24] apptainer works
[2025-12-15 15:13:24] Set ATHENA_PROC_NUMBER=4
[2025-12-15 15:13:24] Set ATHENA_CORE_NUMBER=4
[2025-12-15 15:13:24] Starting ATLAS job with PandaID=6931152561
[2025-12-15 15:13:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 15:17:45]  *** The last 200 lines of the pilot log: ***
[2025-12-15 15:17:45] 2025-12-15 14:16:47,629 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 15:17:45] 2025-12-15 14:16:47,630 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 15:17:45] 2025-12-15 14:16:47,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 15:17:45] 2025-12-15 14:16:47,630 | INFO     | will abort loop
[2025-12-15 15:17:45] 2025-12-15 14:16:47,663 | INFO     | all job control threads have been joined
[2025-12-15 15:17:45] 2025-12-15 14:16:48,084 | INFO     | all payload control threads have been joined
[2025-12-15 15:17:45] 2025-12-15 14:16:48,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 15:17:45] 2025-12-15 14:16:48,436 | INFO     | [job] retrieve thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:48,437 | INFO     | [job] queue monitor thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:48,566 | INFO     | [data] control thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:48,636 | INFO     | [job] job monitor thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:48,668 | INFO     | [job] control thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:48,721 | INFO     | [payload] failed_post thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:49,064 | INFO     | [job] validate thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:49,090 | INFO     | [payload] control thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:49,169 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:49,234 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:49,415 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:49,436 | INFO     | [data] copytool_out thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:49,463 | INFO     | [data] copytool_in thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:49,807 | INFO     | [payload] validate_post thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:49,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:16:52,259 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 15:17:45] 2025-12-15 14:17:39,673 | INFO     | [monitor] cgroup control has ended
[2025-12-15 15:17:45] 2025-12-15 14:17:40,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140625128138560)>', '<ExcThread(monitor, started 140624317630208)>']
[2025-12-15 15:17:45] 2025-12-15 14:17:40,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 15:17:45] 2025-12-15 14:17:40,715 | INFO     | [monitor] control thread has ended
[2025-12-15 15:17:45] 2025-12-15 14:17:45,361 | INFO     | all workflow threads have been joined
[2025-12-15 15:17:45] 2025-12-15 14:17:45,361 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 15:17:45] 2025-12-15 14:17:45,362 | INFO     | traces error code: 0
[2025-12-15 15:17:45] 2025-12-15 14:17:45,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 15:17:45] 2025-12-15 14:17:45,432 [wrapper] ==== pilot stdout END ====
[2025-12-15 15:17:45] 2025-12-15 14:17:45,435 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 15:17:45] 2025-12-15 14:17:45,439 [wrapper] pilotpid: 1535358
[2025-12-15 15:17:45] 2025-12-15 14:17:45,443 [wrapper] Pilot exit status: 0
[2025-12-15 15:17:45] 2025-12-15 14:17:45,454 [wrapper] pandaids: 6931152561
[2025-12-15 15:17:45] 2025-12-15 14:17:45,475 [wrapper] cleanup supervisor_pilot 1535364 1535359
[2025-12-15 15:17:45] 2025-12-15 14:17:45,479 [wrapper] Test setup, not cleaning
[2025-12-15 15:17:45] 2025-12-15 14:17:45,482 [wrapper] apfmon messages muted
[2025-12-15 15:17:45] 2025-12-15 14:17:45,485 [wrapper] ==== wrapper stdout END ====
[2025-12-15 15:17:45] 2025-12-15 14:17:45,488 [wrapper] ==== wrapper stderr END ====
[2025-12-15 15:17:45]  *** Error codes and diagnostics ***
[2025-12-15 15:17:45]     "exeErrorCode": 65,
[2025-12-15 15:17:45]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-12-15 15:17:45]     "pilotErrorCode": 1305,
[2025-12-15 15:17:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-12-15 15:17:45]  *** Listing of results directory ***
[2025-12-15 15:17:45] total 197720
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc    579449 Dec 15 04:37 pilot3.tar.gz
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc      5112 Dec 15 04:37 queuedata.json
[2025-12-15 15:17:45] -rwx------ 1 boinc boinc     36322 Dec 15 04:37 runpilot2-wrapper.sh
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc       100 Dec 15 15:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 15:17:45] -rwxr-xr-x 1 boinc boinc      7986 Dec 15 15:13 run_atlas
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc       105 Dec 15 15:13 job.xml
[2025-12-15 15:17:45] -rw-r--r-- 2 boinc boinc 198325991 Dec 15 15:13 EVNT.47899048._000008.pool.root.1
[2025-12-15 15:17:45] -rw-r--r-- 2 boinc boinc    592382 Dec 15 15:13 input.tar.gz
[2025-12-15 15:17:45] -rw-r--r-- 2 boinc boinc     15847 Dec 15 15:13 start_atlas.sh
[2025-12-15 15:17:45] drwxrwx--x 2 boinc boinc      4096 Dec 15 15:13 shared
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc         0 Dec 15 15:13 boinc_setup_complete
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc      6368 Dec 15 15:13 init_data.xml
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc         0 Dec 15 15:13 boinc_lockfile
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc      2486 Dec 15 15:13 pandaJob.out
[2025-12-15 15:17:45] -rw------- 1 boinc boinc    991020 Dec 15 15:13 agis_schedconf.cvmfs.json
[2025-12-15 15:17:45] -rw------- 1 boinc boinc   1516240 Dec 15 15:13 agis_ddmendpoints.agis.ALL.json
[2025-12-15 15:17:45] drwx------ 5 boinc boinc      4096 Dec 15 15:13 pilot3
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc       523 Dec 15 15:14 boinc_task_state.xml
[2025-12-15 15:17:45] -rw------- 1 boinc boinc       955 Dec 15 15:14 memory_monitor_summary.json
[2025-12-15 15:17:45] -rw------- 1 boinc boinc     33886 Dec 15 15:14 log.47899050._000246.job.log.tgz.1
[2025-12-15 15:17:45] -rw------- 1 boinc boinc        95 Dec 15 15:16 pilot_heartbeat.json
[2025-12-15 15:17:45] -rw------- 1 boinc boinc      8369 Dec 15 15:16 heartbeat.json
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc      8192 Dec 15 15:17 boinc_mmap_file
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc        23 Dec 15 15:17 wrapper_checkpoint.txt
[2025-12-15 15:17:45] -rw------- 1 boinc boinc      4742 Dec 15 15:17 pilotlog.txt
[2025-12-15 15:17:45] -rw------- 1 boinc boinc     85513 Dec 15 15:17 log.47899050._000246.job.log.1
[2025-12-15 15:17:45] -rw------- 1 boinc boinc       188 Dec 15 15:17 output.list
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc       620 Dec 15 15:17 runtime_log
[2025-12-15 15:17:45] -rw------- 1 boinc boinc    143360 Dec 15 15:17 result.tar.gz
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc      8744 Dec 15 15:17 runtime_log.err
[2025-12-15 15:17:45] -rw------- 1 boinc boinc       648 Dec 15 15:17 3uDNDmPaEp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmohSKDmm8VYim.diag
[2025-12-15 15:17:45] -rw-r--r-- 1 boinc boinc      6726 Dec 15 15:17 stderr.txt
[2025-12-15 15:17:45] No HITS result produced
[2025-12-15 15:17:45]  *** Contents of shared directory: ***
[2025-12-15 15:17:45] total 194420
[2025-12-15 15:17:45] -rw-r--r-- 2 boinc boinc 198325991 Dec 15 15:13 ATLAS.root_0
[2025-12-15 15:17:45] -rw-r--r-- 2 boinc boinc    592382 Dec 15 15:13 input.tar.gz
[2025-12-15 15:17:45] -rw-r--r-- 2 boinc boinc     15847 Dec 15 15:13 start_atlas.sh
[2025-12-15 15:17:45] -rw------- 1 boinc boinc    143360 Dec 15 15:17 result.tar.gz
15:17:47 (1531568): run_atlas exited; CPU time 28.287892
15:17:47 (1531568): called boinc_finish(0)

</stderr_txt>
]]>

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