Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:39:11 (3564206): wrapper (7.7.26015): starting
09:39:11 (3564206): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 09:39:11] Arguments: --nthreads 8
[2025-12-15 09:39:11] Threads: 8
[2025-12-15 09:39:11] Checking for CVMFS
[2025-12-15 09:39:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 09:39:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 09:39:11] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 09:39:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 09:39:12] 2.13.3.0 5308 35926 339548 154035 2 548 29902089 32935937 16940 16776704 0 98870005 99.338 186830413 39818 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-15 09:39:12] CVMFS is ok
[2025-12-15 09:39:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 09:39:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 09:39:12] Further information can be found at the LHC@home message board.
[2025-12-15 09:39:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 09:39:12] Checking for apptainer binary...
[2025-12-15 09:39:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 09:39:12] Running /usr/bin/apptainer --version
[2025-12-15 09:39:12] apptainer version 1.4.5-2.el9
[2025-12-15 09:39:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 09:39:12] c6-1-24-1.aglt2.org
[2025-12-15 09:39:12] apptainer works
[2025-12-15 09:39:12] Set ATHENA_PROC_NUMBER=8
[2025-12-15 09:39:12] Set ATHENA_CORE_NUMBER=8
[2025-12-15 09:39:12] Starting ATLAS job with PandaID=6929718359
[2025-12-15 09:39:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 14:22:08]  *** The last 200 lines of the pilot log: ***
[2025-12-15 14:22:08] 2025-12-15 19:21:27,377 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-15 14:22:08] 2025-12-15 19:21:27,381 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2914.843232142858
[2025-12-15 14:22:08] 2025-12-15 19:21:27,389 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929718359/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 14:22:08] 2025-12-15 19:21:27,390 | INFO     | extracted standard info from prmon json
[2025-12-15 14:22:08] 2025-12-15 19:21:27,390 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 14:22:08] 2025-12-15 19:21:27,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 14:22:08] 2025-12-15 19:21:27,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 14:22:08] 2025-12-15 19:21:27,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 14:22:08] 2025-12-15 19:21:27,395 | INFO     | fitting pss+swap vs Time
[2025-12-15 14:22:08] 2025-12-15 19:21:27,395 | INFO     | sum of square deviations: 6519122056.735526
[2025-12-15 14:22:08] 2025-12-15 19:21:27,397 | INFO     | sum of deviations: -2239594301.4963665
[2025-12-15 14:22:08] 2025-12-15 19:21:27,397 | INFO     | mean x: 1765818046.7427535
[2025-12-15 14:22:08] 2025-12-15 19:21:27,397 | INFO     | mean y: 2517518.6268115942
[2025-12-15 14:22:08] 2025-12-15 19:21:27,397 | INFO     | intersect: 609150743.2461485
[2025-12-15 14:22:08] 2025-12-15 19:21:27,398 | INFO     | chi2: 2.678936090664468
[2025-12-15 14:22:08] 2025-12-15 19:21:27,398 | INFO     | sum of square deviations: 6171210386.435417
[2025-12-15 14:22:08] 2025-12-15 19:21:27,399 | INFO     | sum of deviations: 15337844406.46863
[2025-12-15 14:22:08] 2025-12-15 19:21:27,399 | INFO     | mean x: 1765817894.2472324
[2025-12-15 14:22:08] 2025-12-15 19:21:27,399 | INFO     | mean y: 2525112.291512915
[2025-12-15 14:22:08] 2025-12-15 19:21:27,400 | INFO     | intersect: -4386215250.807039
[2025-12-15 14:22:08] 2025-12-15 19:21:27,400 | INFO     | chi2: 2.004823339110529
[2025-12-15 14:22:08] 2025-12-15 19:21:27,400 | INFO     | current chi2=2.004823339110529 (change=25.163450292938343 %)
[2025-12-15 14:22:08] 2025-12-15 19:21:27,401 | INFO     | sum of square deviations: 5835903603.62402
[2025-12-15 14:22:08] 2025-12-15 19:21:27,402 | INFO     | sum of deviations: 15043963619.78948
[2025-12-15 14:22:08] 2025-12-15 19:21:27,402 | INFO     | mean x: 1765817741.7518797
[2025-12-15 14:22:08] 2025-12-15 19:21:27,403 | INFO     | mean y: 2524976.9210526315
[2025-12-15 14:22:08] 2025-12-15 19:21:27,403 | INFO     | intersect: -4549451832.565252
[2025-12-15 14:22:08] 2025-12-15 19:21:27,403 | INFO     | chi2: 2.005384853985344
[2025-12-15 14:22:08] 2025-12-15 19:21:27,403 | INFO     | current chi2=2.005384853985344 (change=-0.02800819722420848 %)
[2025-12-15 14:22:08] 2025-12-15 19:21:27,403 | INFO     | right removable region: 265
[2025-12-15 14:22:08] 2025-12-15 19:21:27,403 | INFO     | sum of square deviations: 6171169516.435417
[2025-12-15 14:22:08] 2025-12-15 19:21:27,408 | INFO     | sum of deviations: -51994891086.579315
[2025-12-15 14:22:08] 2025-12-15 19:21:27,409 | INFO     | mean x: 1765818199.2472324
[2025-12-15 14:22:08] 2025-12-15 19:21:27,409 | INFO     | mean y: 2539169.5608856087
[2025-12-15 14:22:08] 2025-12-15 19:21:27,409 | INFO     | intersect: 14880355230.849812
[2025-12-15 14:22:08] 2025-12-15 19:21:27,409 | INFO     | chi2: 0.942496688966715
[2025-12-15 14:22:08] 2025-12-15 19:21:27,409 | INFO     | current chi2=0.942496688966715 (change=64.8182466072588 %)
[2025-12-15 14:22:08] 2025-12-15 19:21:27,410 | INFO     | sum of square deviations: 5835821863.62402
[2025-12-15 14:22:08] 2025-12-15 19:21:27,413 | INFO     | sum of deviations: -49024780958.7068
[2025-12-15 14:22:08] 2025-12-15 19:21:27,413 | INFO     | mean x: 1765818351.7518797
[2025-12-15 14:22:08] 2025-12-15 19:21:27,413 | INFO     | mean y: 2537798.9135338347
[2025-12-15 14:22:08] 2025-12-15 19:21:27,413 | INFO     | intersect: 14836585158.567125
[2025-12-15 14:22:08] 2025-12-15 19:21:27,414 | INFO     | chi2: 0.9303992169822366
[2025-12-15 14:22:08] 2025-12-15 19:21:27,414 | INFO     | current chi2=0.9303992169822366 (change=1.2835559133625396 %)
[2025-12-15 14:22:08] 2025-12-15 19:21:27,414 | INFO     | left removable region: 20
[2025-12-15 14:22:08] 2025-12-15 19:21:27,415 | INFO     | sum of square deviations: 4559848536.677575
[2025-12-15 14:22:08] 2025-12-15 19:21:27,420 | INFO     | sum of deviations: -6662752106.228561
[2025-12-15 14:22:08] 2025-12-15 19:21:27,421 | INFO     | mean x: 1765818321.2734694
[2025-12-15 14:22:08] 2025-12-15 19:21:27,421 | INFO     | mean y: 2533872.257142857
[2025-12-15 14:22:08] 2025-12-15 19:21:27,421 | INFO     | intersect: 2582709429.547524
[2025-12-15 14:22:08] 2025-12-15 19:21:27,421 | INFO     | chi2: 0.11505304080737278
[2025-12-15 14:22:08] 2025-12-15 19:21:27,421 | INFO     | current memory leak: -1.46 B/s (using 245 data points, chi2=0.12)
[2025-12-15 14:22:08] 2025-12-15 19:21:27,422 | INFO     | could have reported an average CPU frequency of 2865 MHz (13 samples)
[2025-12-15 14:22:08] 2025-12-15 19:21:27,422 | INFO     | ..............................
[2025-12-15 14:22:08] 2025-12-15 19:21:27,422 | INFO     | . Timing measurements:
[2025-12-15 14:22:08] 2025-12-15 19:21:27,422 | INFO     | . get job = 0 s
[2025-12-15 14:22:08] 2025-12-15 19:21:27,422 | INFO     | . initial setup = 3 s
[2025-12-15 14:22:08] 2025-12-15 19:21:27,422 | INFO     | . payload setup = 23 s
[2025-12-15 14:22:08] 2025-12-15 19:21:27,422 | INFO     | . stage-in = 0 s
[2025-12-15 14:22:08] 2025-12-15 19:21:27,422 | INFO     | . payload execution = 16822 s
[2025-12-15 14:22:08] 2025-12-15 19:21:27,422 | INFO     | . stage-out = 3 s
[2025-12-15 14:22:08] 2025-12-15 19:21:27,422 | INFO     | . log creation = 0 s
[2025-12-15 14:22:08] 2025-12-15 19:21:27,423 | INFO     | ..............................
[2025-12-15 14:22:08] 2025-12-15 19:21:27,511 | INFO     | 
[2025-12-15 14:22:08] 2025-12-15 19:21:27,511 | INFO     | job summary report
[2025-12-15 14:22:08] 2025-12-15 19:21:27,511 | INFO     | --------------------------------------------------
[2025-12-15 14:22:08] 2025-12-15 19:21:27,511 | INFO     | PanDA job id: 6929718359
[2025-12-15 14:22:08] 2025-12-15 19:21:27,511 | INFO     | task id: 47898763
[2025-12-15 14:22:08] 2025-12-15 19:21:27,511 | INFO     | errors: (none)
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | pilot state: finished 
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | transexitcode: 0
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | exeerrorcode: 0
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | exeerrordiag: 
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | exitcode: 0
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | exitmsg: OK
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | cpuconsumptiontime: 58263 s
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | nevents: 400
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | neventsw: 0
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | pid: 3585431
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | pgrp: 3585431
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | corecount: 8
[2025-12-15 14:22:08] 2025-12-15 19:21:27,512 | INFO     | event service: False
[2025-12-15 14:22:08] 2025-12-15 19:21:27,513 | INFO     | sizes: {0: 2283788, 1: 2283987, 11: 2283987, 18: 2284277, 22: 2284305, 16850: 2316386, 16854: 2325384, 16858: 2325440, 16873: 2325634}
[2025-12-15 14:22:08] 2025-12-15 19:21:27,513 | INFO     | --------------------------------------------------
[2025-12-15 14:22:08] 2025-12-15 19:21:27,513 | INFO     | 
[2025-12-15 14:22:08] 2025-12-15 19:21:27,513 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-15 14:22:08] 2025-12-15 19:21:27,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 14:22:08] 2025-12-15 19:21:27,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 14:22:08] 2025-12-15 19:21:27,535 | INFO     | job 6929718359 has completed (purged errors)
[2025-12-15 14:22:08] 2025-12-15 19:21:27,535 | INFO     | overall cleanup function is called
[2025-12-15 14:22:08] 2025-12-15 19:21:28,557 | INFO     | --- collectZombieJob: --- 10, [3585431]
[2025-12-15 14:22:08] 2025-12-15 19:21:28,557 | INFO     | zombie collector waiting for pid 3585431
[2025-12-15 14:22:08] 2025-12-15 19:21:28,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 14:22:08] 2025-12-15 19:21:28,557 | INFO     | collected zombie processes
[2025-12-15 14:22:08] 2025-12-15 19:21:28,557 | INFO     | will attempt to kill all subprocesses of pid=3585431
[2025-12-15 14:22:08] 2025-12-15 19:21:28,932 | INFO     | process IDs to be killed: [3585431] (in reverse order)
[2025-12-15 14:22:08] 2025-12-15 19:21:29,149 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 14:22:08] 2025-12-15 19:21:29,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 14:22:08] 2025-12-15 19:21:29,244 | INFO     | did not find any defunct processes belonging to 3585431
[2025-12-15 14:22:08] 2025-12-15 19:21:29,294 | INFO     | did not find any defunct processes belonging to 3585431
[2025-12-15 14:22:08] 2025-12-15 19:21:29,294 | INFO     | ready for new job
[2025-12-15 14:22:08] 2025-12-15 19:21:29,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 14:22:08] 2025-12-15 19:21:29,309 | INFO     | ***************************************
[2025-12-15 14:22:08] 2025-12-15 19:21:29,310 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 14:22:08] 2025-12-15 19:21:29,310 | INFO     | ***************************************
[2025-12-15 14:22:08] 2025-12-15 19:21:29,310 | INFO     | 
[2025-12-15 14:22:08] 2025-12-15 19:21:29,326 | INFO     | architecture information:
[2025-12-15 14:22:08] 2025-12-15 19:21:29,329 | INFO     | executing command: cat /etc/os-release
[2025-12-15 14:22:08] 2025-12-15 19:21:29,372 | INFO     | cat /etc/os-release:
[2025-12-15 14:22:08] NAME="CentOS Linux"
[2025-12-15 14:22:08] VERSION="7 (Core)"
[2025-12-15 14:22:08] ID="centos"
[2025-12-15 14:22:08] ID_LIKE="rhel fedora"
[2025-12-15 14:22:08] VERSION_ID="7"
[2025-12-15 14:22:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 14:22:08] ANSI_COLOR="0;31"
[2025-12-15 14:22:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 14:22:08] HOME_URL="https://www.centos.org/"
[2025-12-15 14:22:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 14:22:08] 
[2025-12-15 14:22:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 14:22:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 14:22:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 14:22:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 14:22:08] 
[2025-12-15 14:22:08] 2025-12-15 19:21:29,372 | INFO     | ***************************************
[2025-12-15 14:22:08] 2025-12-15 19:21:29,876 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-15 14:22:08] 2025-12-15 19:21:29,918 | INFO     | sufficient remaining disk space (75675729920 B)
[2025-12-15 14:22:08] 2025-12-15 19:21:29,919 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 14:22:08] 2025-12-15 19:21:29,920 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 14:22:08] 2025-12-15 19:21:29,920 | INFO     | update_server=False
[2025-12-15 14:22:08] 2025-12-15 19:21:29,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 14:22:08] 2025-12-15 19:21:29,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 14:22:08] 2025-12-15 19:21:29,958 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 14:22:08] 2025-12-15 19:21:29,958 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 14:22:08] 2025-12-15 19:21:29,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 14:22:08] 2025-12-15 19:21:29,958 | INFO     | will abort loop
[2025-12-15 14:22:08] 2025-12-15 19:21:30,598 | INFO     | all job control threads have been joined
[2025-12-15 14:22:08] 2025-12-15 19:21:30,680 | INFO     | all data control threads have been joined
[2025-12-15 14:22:08] 2025-12-15 19:21:30,926 | INFO     | [job] retrieve thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:30,967 | INFO     | [job] job monitor thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:31,239 | INFO     | [payload] failed_post thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:31,292 | INFO     | all payload control threads have been joined
[2025-12-15 14:22:08] 2025-12-15 19:21:31,382 | INFO     | [data] copytool_in thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:31,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 14:22:08] 2025-12-15 19:21:31,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:31,604 | INFO     | [job] control thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:31,686 | INFO     | [data] control thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:31,860 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:31,898 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:31,927 | INFO     | [data] copytool_out thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:32,056 | INFO     | [job] validate thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:32,172 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:32,298 | INFO     | [payload] control thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:32,504 | INFO     | [payload] validate_post thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:32,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 14:22:08] 2025-12-15 19:21:33,541 | INFO     | [job] queue monitor thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:35,452 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 14:22:08] 2025-12-15 19:21:59,465 | INFO     | PID=3570278 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 14:22:08] 2025-12-15 19:21:59,465 | INFO     | .. there are 16 such processes running
[2025-12-15 14:22:08] 2025-12-15 19:21:59,466 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 14:22:08] 2025-12-15 19:21:59,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 14:22:08] 2025-12-15 19:21:59,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 14:22:08] 2025-12-15 19:22:02,784 | INFO     | [monitor] cgroup control has ended
[2025-12-15 14:22:08] 2025-12-15 19:22:03,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140344105371456)>', '<ExcThread(monitor, started 140342930163456)>']
[2025-12-15 14:22:08] 2025-12-15 19:22:03,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 14:22:08] 2025-12-15 19:22:03,491 | INFO     | [monitor] control thread has ended
[2025-12-15 14:22:08] 2025-12-15 19:22:08,027 | INFO     | all workflow threads have been joined
[2025-12-15 14:22:08] 2025-12-15 19:22:08,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 14:22:08] 2025-12-15 19:22:08,028 | INFO     | traces error code: 0
[2025-12-15 14:22:08] 2025-12-15 19:22:08,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 14:22:08] 2025-12-15 19:22:08,191 [wrapper] ==== pilot stdout END ====
[2025-12-15 14:22:08] 2025-12-15 19:22:08,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 14:22:08] 2025-12-15 19:22:08,197 [wrapper] pilotpid: 3570278
[2025-12-15 14:22:08] 2025-12-15 19:22:08,200 [wrapper] Pilot exit status: 0
[2025-12-15 14:22:08] 2025-12-15 19:22:08,259 [wrapper] pandaids: 6929718359
[2025-12-15 14:22:08] 2025-12-15 19:22:08,345 [wrapper] cleanup supervisor_pilot  185840 3570279
[2025-12-15 14:22:08] 2025-12-15 19:22:08,358 [wrapper] Test setup, not cleaning
[2025-12-15 14:22:08] 2025-12-15 19:22:08,373 [wrapper] apfmon messages muted
[2025-12-15 14:22:08] 2025-12-15 19:22:08,388 [wrapper] ==== wrapper stdout END ====
[2025-12-15 14:22:08] 2025-12-15 19:22:08,391 [wrapper] ==== wrapper stderr END ====
[2025-12-15 14:22:08]  *** Error codes and diagnostics ***
[2025-12-15 14:22:08]     "exeErrorCode": 0,
[2025-12-15 14:22:08]     "exeErrorDiag": "",
[2025-12-15 14:22:08]     "pilotErrorCode": 0,
[2025-12-15 14:22:08]     "pilotErrorDiag": "",
[2025-12-15 14:22:08]  *** Listing of results directory ***
[2025-12-15 14:22:08] total 444520
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 03:08 pilot3.tar.gz
[2025-12-15 14:22:08] -rwx------. 1 boincer umatlas     36322 Dec 15 03:12 runpilot2-wrapper.sh
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 03:16 queuedata.json
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas       100 Dec 15 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 14:22:08] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 09:39 run_atlas
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas       105 Dec 15 09:39 job.xml
[2025-12-15 14:22:08] -rw-r--r--. 2 boincer umatlas 223976886 Dec 15 09:39 EVNT.47898761._000587.pool.root.1
[2025-12-15 14:22:08] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 09:39 shared
[2025-12-15 14:22:08] -rw-r--r--. 2 boincer umatlas    592399 Dec 15 09:39 input.tar.gz
[2025-12-15 14:22:08] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 09:39 start_atlas.sh
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas         0 Dec 15 09:39 boinc_lockfile
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas      2509 Dec 15 09:39 pandaJob.out
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas        57 Dec 15 09:39 setup.sh.local
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas    994497 Dec 15 09:39 agis_schedconf.cvmfs.json
[2025-12-15 14:22:08] drwx------. 5 boincer umatlas      4096 Dec 15 09:39 pilot3
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas 221929831 Dec 15 14:20 HITS.47898763._015578.pool.root.1
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas       531 Dec 15 14:20 boinc_task_state.xml
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas      6841 Dec 15 14:20 init_data.xml
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas      1043 Dec 15 14:21 memory_monitor_summary.json
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas   1516240 Dec 15 14:21 agis_ddmendpoints.agis.ALL.json
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas    506620 Dec 15 14:21 log.47898763._015578.job.log.tgz.1
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas      7839 Dec 15 14:21 heartbeat.json
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas        95 Dec 15 14:21 pilot_heartbeat.json
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas        28 Dec 15 14:22 wrapper_checkpoint.txt
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 14:22 boinc_mmap_file
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas      5010 Dec 15 14:22 pilotlog.txt
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas   2174432 Dec 15 14:22 log.47898763._015578.job.log.1
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas       357 Dec 15 14:22 output.list
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas       620 Dec 15 14:22 runtime_log
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas   2703360 Dec 15 14:22 result.tar.gz
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas      9348 Dec 15 14:22 runtime_log.err
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas       658 Dec 15 14:22 CBZLDmUsIp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXgXKDmHwfCQo.diag
[2025-12-15 14:22:08] -rw-r--r--. 1 boincer umatlas     21182 Dec 15 14:22 stderr.txt
[2025-12-15 14:22:08] HITS file was successfully produced:
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas 221929831 Dec 15 14:20 shared/HITS.pool.root.1
[2025-12-15 14:22:08]  *** Contents of shared directory: ***
[2025-12-15 14:22:08] total 438700
[2025-12-15 14:22:08] -rw-r--r--. 2 boincer umatlas 223976886 Dec 15 09:39 ATLAS.root_0
[2025-12-15 14:22:08] -rw-r--r--. 2 boincer umatlas    592399 Dec 15 09:39 input.tar.gz
[2025-12-15 14:22:08] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 09:39 start_atlas.sh
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas 221929831 Dec 15 14:20 HITS.pool.root.1
[2025-12-15 14:22:08] -rw-------. 1 boincer umatlas   2703360 Dec 15 14:22 result.tar.gz
14:22:09 (3564206): run_atlas exited; CPU time 58726.240335
14:22:09 (3564206): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN