Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-15 11:32:59 (17664): vboxwrapper version 26210
2025-12-15 11:32:59 (17664): BOINC client version: 8.2.8
2025-12-15 11:33:00 (17664): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2025-12-15 11:33:01 (17664): Successfully copied 'init_data.xml' to the shared directory.
2025-12-15 11:33:01 (17664): Create VM. (boinc_721331116652ca98, slot#0)
2025-12-15 11:33:02 (17664): Setting Memory Size for VM. (4600MB)
2025-12-15 11:33:02 (17664): Setting CPU Count for VM. (6)
2025-12-15 11:33:02 (17664): Setting Chipset Options for VM.
2025-12-15 11:33:02 (17664): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-15 11:33:03 (17664): Setting Boot Options for VM.
2025-12-15 11:33:03 (17664): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-15 11:33:04 (17664): Enabling VM Network Access.
2025-12-15 11:33:04 (17664): Disabling USB Support for VM.
2025-12-15 11:33:04 (17664): Disabling COM Port Support for VM.
2025-12-15 11:33:05 (17664): Disabling LPT Port Support for VM.
2025-12-15 11:33:05 (17664): Disabling Audio Support for VM.
2025-12-15 11:33:05 (17664): Disabling Clipboard Support for VM.
2025-12-15 11:33:05 (17664): Disabling Drag and Drop Support for VM.
2025-12-15 11:33:06 (17664): Adding storage controller(s) to VM.
2025-12-15 11:33:06 (17664): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-15 11:33:08 (17664): Adding VirtualBox Guest Additions to VM.
2025-12-15 11:33:08 (17664): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-15 11:33:09 (17664): forwarding host port 50697 to guest port 80
2025-12-15 11:33:09 (17664): Enabling remote desktop for VM.
2025-12-15 11:33:10 (17664): Enabling shared directory for VM.
2025-12-15 11:33:11 (17664): Starting VM using VBoxManage interface. (boinc_721331116652ca98, slot#0)
2025-12-15 11:33:23 (17664): Successfully started VM. (PID = '22236')
2025-12-15 11:33:23 (17664): Reporting VM Process ID to BOINC.
2025-12-15 11:33:23 (17664): Guest Log: BIOS: VirtualBox 7.2.0
2025-12-15 11:33:23 (17664): Guest Log: CPUID EDX: 0x178bfbff
2025-12-15 11:33:23 (17664): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-15 11:33:23 (17664): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-15 11:33:23 (17664): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-15 11:33:23 (17664): Detected: Web Application Enabled (http://localhost:50697)
2025-12-15 11:33:23 (17664): Detected: Remote Desktop Enabled (localhost:50698)
2025-12-15 11:33:23 (17664): Preference change detected
2025-12-15 11:33:23 (17664): Setting CPU throttle for VM. (100%)
2025-12-15 11:33:23 (17664): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-15 11:33:25 (17664): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-15 11:33:25 (17664): Guest Log: BIOS: Booting from Hard Disk...
2025-12-15 11:33:28 (17664): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-15 11:33:28 (17664): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-15 11:33:28 (17664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-15 11:33:36 (17664): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-15 11:33:36 (17664): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-15 11:33:44 (17664): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-15 11:33:44 (17664): Guest Log: 00:00:00.000204 main     Log opened 2025-12-15T11:33:42.427541000Z
2025-12-15 11:33:44 (17664): Guest Log: 00:00:00.000336 main     OS Product: Linux
2025-12-15 11:33:44 (17664): Guest Log: 00:00:00.000386 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-15 11:33:44 (17664): Guest Log: 00:00:00.000427 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-15 11:33:44 (17664): Guest Log: 00:00:00.000468 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-15 11:33:44 (17664): Guest Log: 00:00:00.000469 main     Process ID: 1339
2025-12-15 11:33:44 (17664): Guest Log: 00:00:00.000470 main     Package type: LINUX_64BITS_GENERIC
2025-12-15 11:33:44 (17664): Guest Log: 00:00:00.002988 main     5.2.32 r132073 started. Verbose level = 0
2025-12-15 11:33:44 (17664): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-15 11:33:44 (17664): Guest Log: [INFO] Mounting shared directory
2025-12-15 11:33:44 (17664): Guest Log: [INFO] Checking for init_data.xml
2025-12-15 11:33:49 (17664): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-15 11:33:49 (17664): Guest Log: [INFO] Detected branch: prod
2025-12-15 11:33:49 (17664): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-15 11:33:49 (17664): Guest Log: Copying input files
2025-12-15 11:33:51 (17664): Guest Log: Copied input files into RunAtlas.
2025-12-15 11:33:51 (17664): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-15 11:33:51 (17664): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-15 11:33:51 (17664): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-15 11:33:51 (17664): Guest Log: Further information can be found at the LHC@home message board.
2025-12-15 11:33:54 (17664): Guest Log: 00:00:10.007824 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 385 121 000ns (GuestNow=1 765 820 033 818 579 000 ns GuestLast=1 765 798 422 433 458 000 ns fSetTimeLastLoop=true )
2025-12-15 11:33:59 (17664): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-15 11:33:59 (17664): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-15 11:33:59 (17664): Guest Log: 2.6.3.0 1617 0 30140 154041 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-15 11:34:01 (17664): Guest Log: copied the webapp to /var/www
2025-12-15 11:34:01 (17664): Guest Log: ATHENA_PROC_NUMBER=6
2025-12-15 11:34:01 (17664): Guest Log: ATHENA_CORE_NUMBER=6
2025-12-15 11:34:02 (17664): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-15 11:34:02 (17664): Guest Log:  *** Starting ATLAS job. (PandaID=6931296811 taskID=47898878) ***
2025-12-15 13:14:44 (17664): Status Report: Elapsed Time: '6000.769321'
2025-12-15 13:14:44 (17664): Status Report: CPU Time: '31908.875000'
2025-12-15 14:42:51 (17664): Guest Log:  *** Job finished ***
2025-12-15 14:42:51 (17664): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:29,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:29,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:42,869 | INFO     | [monitor] cgroup control has ended
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:44,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777063208768)>', '<ExcThread(monitor, started 139776447457024)>']
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:45,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:45,013 | INFO     | [monitor] control thread has ended
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,157 | INFO     | all workflow threads have been joined
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,157 | INFO     | end of generic workflow (traces error code: 0)
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,158 | INFO     | traces error code: 0
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,308 [wrapper] ==== pilot stdout END ====
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,317 [wrapper] ==== wrapper stdout RESUME ====
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,325 [wrapper] pilotpid: 6058
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,334 [wrapper] Pilot exit status: 0
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,514 [wrapper] pandaids: 6931296811
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,655 [wrapper] cleanup supervisor_pilot 11087 6059
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,668 [wrapper] Test setup, not cleaning
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,678 [wrapper] apfmon messages muted
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,687 [wrapper] ==== wrapper stdout END ====
2025-12-15 14:42:51 (17664): Guest Log: 2025-12-15 20:42:49,696 [wrapper] ==== wrapper stderr END ====
2025-12-15 14:42:51 (17664): Guest Log:  *** Error codes and diagnostics ***
2025-12-15 14:42:51 (17664): Guest Log:     "exeErrorCode": 0,
2025-12-15 14:42:51 (17664): Guest Log:     "exeErrorDiag": "",
2025-12-15 14:42:51 (17664): Guest Log:     "pilotErrorCode": 0,
2025-12-15 14:42:51 (17664): Guest Log:     "pilotErrorDiag": "",
2025-12-15 14:42:51 (17664): Guest Log:  *** Listing of results directory ***
2025-12-15 14:42:51 (17664): Guest Log: total 188468
2025-12-15 14:42:51 (17664): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 15 03:37 pilot3.tar.gz
2025-12-15 14:42:51 (17664): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 15 03:37 queuedata.json
2025-12-15 14:42:51 (17664): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 15 03:37 runpilot2-wrapper.sh
2025-12-15 14:42:51 (17664): Guest Log: -rwxr-xr-x. 1 atlas atlas      8633 Dec 15 17:33 init_data.xml
2025-12-15 14:42:51 (17664): Guest Log: -rwxr-xr-x. 1 atlas atlas    592384 Dec 15 17:33 input.tar.gz
2025-12-15 14:42:51 (17664): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 15 17:33 start_atlas.sh
2025-12-15 14:42:51 (17664): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 15 17:33 EVNT.47898875._000146.pool.root.1 -> /data/./ATLAS.root_0
2025-12-15 14:42:51 (17664): Guest Log: -rw-r--r--. 1 atlas atlas      2497 Dec 15 17:34 pandaJob.out
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas    994473 Dec 15 17:35 agis_schedconf.cvmfs.json
2025-12-15 14:42:51 (17664): Guest Log: drwx------. 5 atlas atlas      4096 Dec 15 17:35 pilot3
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas 185458210 Dec 15 20:40 HITS.47898878._003658.pool.root.1
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas      1032 Dec 15 20:41 memory_monitor_summary.json
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 15 20:41 agis_ddmendpoints.agis.ALL.json
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas    366663 Dec 15 20:41 log.47898878._003658.job.log.tgz.1
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas      7824 Dec 15 20:41 heartbeat.json
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas        95 Dec 15 20:42 pilot_heartbeat.json
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas      4805 Dec 15 20:42 pilotlog.txt
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas   1476349 Dec 15 20:42 log.47898878._003658.job.log.1
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas       357 Dec 15 20:42 output.list
2025-12-15 14:42:51 (17664): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 15 20:42 runtime_log
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas   1863680 Dec 15 20:42 result.tar.gz
2025-12-15 14:42:51 (17664): Guest Log: -rw-r--r--. 1 atlas atlas      8780 Dec 15 20:42 runtime_log.err
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas       668 Dec 15 20:42 N5dMDmPaEp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOhSKDmQibSNn.diag
2025-12-15 14:42:51 (17664): Guest Log: Looking for outputfile HITS.47898878._003658.pool.root.1
2025-12-15 14:42:51 (17664): Guest Log: HITS file was successfully produced
2025-12-15 14:42:51 (17664): Guest Log: -rw-------. 1 atlas atlas 185458210 Dec 15 20:40 /home/atlas/RunAtlas/HITS.47898878._003658.pool.root.1
2025-12-15 14:42:52 (17664): Guest Log: Successfully finished the ATLAS job!
2025-12-15 14:42:52 (17664): Guest Log: Copying the results back to the shared directory!
2025-12-15 14:42:53 (17664): Guest Log:  *** Contents of shared directory: ***
2025-12-15 14:42:53 (17664): Guest Log: total 379212
2025-12-15 14:42:53 (17664): Guest Log: -rwxrwxrwx. 1 root root 200365789 Dec 15 17:32 ATLAS.root_0
2025-12-15 14:42:53 (17664): Guest Log: -rwxrwxrwx. 1 root root 185458210 Dec 15 20:42 HITS.pool.root.1
2025-12-15 14:42:53 (17664): Guest Log: -rwxrwxrwx. 1 root root      8633 Dec 15 17:32 init_data.xml
2025-12-15 14:42:53 (17664): Guest Log: -rwxrwxrwx. 1 root root    592384 Dec 15 14:00 input.tar.gz
2025-12-15 14:42:53 (17664): Guest Log: -rwxrwxrwx. 1 root root   1863680 Dec 15 20:42 result.tar.gz
2025-12-15 14:42:53 (17664): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 15 14:00 start_atlas.sh
2025-12-15 14:42:53 (17664): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-15 14:42:53 (17664): VM Completion File Detected.
2025-12-15 14:42:53 (17664): Powering off VM.
2025-12-15 14:42:54 (17664): Successfully stopped VM.
2025-12-15 14:42:54 (17664): Deregistering VM. (boinc_721331116652ca98, slot#0)
2025-12-15 14:42:54 (17664): Removing network bandwidth throttle group from VM.
2025-12-15 14:42:55 (17664): Removing VM from VirtualBox.
2025-12-15 14:43:00 (17664): called boinc_finish(0)

</stderr_txt>
]]>

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