Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:08:52 (494747): wrapper (7.7.26015): starting
10:08:52 (494747): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 10:08:52] Arguments: --nthreads 4
[2025-12-16 10:08:52] Threads: 4
[2025-12-16 10:08:52] Checking for CVMFS
[2025-12-16 10:08:52] No cvmfs_config command found, will try listing directly
[2025-12-16 10:08:52] CVMFS is ok
[2025-12-16 10:08:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 10:08:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 10:08:52] Further information can be found at the LHC@home message board.
[2025-12-16 10:08:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 10:08:52] Checking for apptainer binary...
[2025-12-16 10:08:52] which: no apptainer in ((null))
[2025-12-16 10:08:52] apptainer is not installed, using version from CVMFS
[2025-12-16 10:08:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 10:08:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-12-16 10:08:53] apptainer works
[2025-12-16 10:08:53] Set ATHENA_PROC_NUMBER=4
[2025-12-16 10:08:53] Set ATHENA_CORE_NUMBER=4
[2025-12-16 10:08:53] Starting ATLAS job with PandaID=6929570515
[2025-12-16 10:08:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 14:32:06]  *** The last 200 lines of the pilot log: ***
[2025-12-16 14:32:06] 2025-12-16 13:09:47,247 | INFO     | chi2: 1.3071629256272002
[2025-12-16 14:32:06] 2025-12-16 13:09:47,247 | INFO     | current chi2=1.3071629256272002 (change=-0.021384973288792776 %)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,247 | INFO     | right removable region: 230
[2025-12-16 14:32:06] 2025-12-16 13:09:47,247 | INFO     | sum of square deviations: 3822136780.0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,249 | INFO     | sum of deviations: 7126699967.000003
[2025-12-16 14:32:06] 2025-12-16 13:09:47,249 | INFO     | mean x: 1765883504.0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,249 | INFO     | mean y: 2330101.554112554
[2025-12-16 14:32:06] 2025-12-16 13:09:47,249 | INFO     | intersect: -3290310281.0547614
[2025-12-16 14:32:06] 2025-12-16 13:09:47,249 | INFO     | chi2: 0.0030991123495933987
[2025-12-16 14:32:06] 2025-12-16 13:09:47,250 | INFO     | current chi2=0.0030991123495933987 (change=99.76286237674205 %)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,250 | INFO     | sum of square deviations: 3579276412.5
[2025-12-16 14:32:06] 2025-12-16 13:09:47,252 | INFO     | sum of deviations: 5759751942.999998
[2025-12-16 14:32:06] 2025-12-16 13:09:47,252 | INFO     | mean x: 1765883656.5
[2025-12-16 14:32:06] 2025-12-16 13:09:47,252 | INFO     | mean y: 2330959.1592920353
[2025-12-16 14:32:06] 2025-12-16 13:09:47,252 | INFO     | intersect: -2839319321.3603086
[2025-12-16 14:32:06] 2025-12-16 13:09:47,252 | INFO     | chi2: 0.0009321094332927857
[2025-12-16 14:32:06] 2025-12-16 13:09:47,252 | INFO     | current chi2=0.0009321094332927857 (change=69.92334164926038 %)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,253 | INFO     | sum of square deviations: 3346927870.0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,254 | INFO     | sum of deviations: 4654745360.999999
[2025-12-16 14:32:06] 2025-12-16 13:09:47,254 | INFO     | mean x: 1765883809.0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,254 | INFO     | mean y: 2331684.271493213
[2025-12-16 14:32:06] 2025-12-16 13:09:47,254 | INFO     | intersect: -2453574085.8184247
[2025-12-16 14:32:06] 2025-12-16 13:09:47,255 | INFO     | chi2: 0.0004675744096536112
[2025-12-16 14:32:06] 2025-12-16 13:09:47,255 | INFO     | current chi2=0.0004675744096536112 (change=49.83696195393605 %)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,255 | INFO     | sum of square deviations: 3124858590.0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,257 | INFO     | sum of deviations: 3982670083.5000005
[2025-12-16 14:32:06] 2025-12-16 13:09:47,257 | INFO     | mean x: 1765883961.5
[2025-12-16 14:32:06] 2025-12-16 13:09:47,257 | INFO     | mean y: 2332146.1805555555
[2025-12-16 14:32:06] 2025-12-16 13:09:47,257 | INFO     | intersect: -2248308329.809277
[2025-12-16 14:32:06] 2025-12-16 13:09:47,257 | INFO     | chi2: 0.00034820048321879474
[2025-12-16 14:32:06] 2025-12-16 13:09:47,257 | INFO     | current chi2=0.00034820048321879474 (change=25.53046616115094 %)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,258 | INFO     | sum of square deviations: 2912836010.0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,259 | INFO     | sum of deviations: 3336635218.0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,259 | INFO     | mean x: 1765884114.0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,259 | INFO     | mean y: 2332610.592417062
[2025-12-16 14:32:06] 2025-12-16 13:09:47,259 | INFO     | intersect: -2020476468.0687354
[2025-12-16 14:32:06] 2025-12-16 13:09:47,260 | INFO     | chi2: 0.0002149309328679865
[2025-12-16 14:32:06] 2025-12-16 13:09:47,260 | INFO     | current chi2=0.0002149309328679865 (change=38.27379822074146 %)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,260 | INFO     | sum of square deviations: 2710627567.5
[2025-12-16 14:32:06] 2025-12-16 13:09:47,262 | INFO     | sum of deviations: 2960635945.5000005
[2025-12-16 14:32:06] 2025-12-16 13:09:47,262 | INFO     | mean x: 1765884266.5
[2025-12-16 14:32:06] 2025-12-16 13:09:47,262 | INFO     | mean y: 2332892.8203883497
[2025-12-16 14:32:06] 2025-12-16 13:09:47,262 | INFO     | intersect: -1926423568.4793444
[2025-12-16 14:32:06] 2025-12-16 13:09:47,262 | INFO     | chi2: 0.00017435404552632277
[2025-12-16 14:32:06] 2025-12-16 13:09:47,262 | INFO     | current chi2=0.00017435404552632277 (change=18.879035604701258 %)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,262 | INFO     | left removable region: 60
[2025-12-16 14:32:06] 2025-12-16 13:09:47,263 | INFO     | sum of square deviations: 1523386702.5
[2025-12-16 14:32:06] 2025-12-16 13:09:47,264 | INFO     | sum of deviations: 1408711186.0000002
[2025-12-16 14:32:06] 2025-12-16 13:09:47,264 | INFO     | mean x: 1765884998.5
[2025-12-16 14:32:06] 2025-12-16 13:09:47,264 | INFO     | mean y: 2334167.964705882
[2025-12-16 14:32:06] 2025-12-16 13:09:47,264 | INFO     | intersect: -1630620843.716935
[2025-12-16 14:32:06] 2025-12-16 13:09:47,264 | INFO     | chi2: 0.00011489721911445974
[2025-12-16 14:32:06] 2025-12-16 13:09:47,264 | INFO     | current memory leak: 0.92 B/s (using 170 data points, chi2=0.00)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,265 | INFO     | could have reported an average CPU frequency of 2695 MHz (11 samples)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,265 | INFO     | ..............................
[2025-12-16 14:32:06] 2025-12-16 13:09:47,265 | INFO     | . Timing measurements:
[2025-12-16 14:32:06] 2025-12-16 13:09:47,265 | INFO     | . get job = 0 s
[2025-12-16 14:32:06] 2025-12-16 13:09:47,265 | INFO     | . initial setup = 1 s
[2025-12-16 14:32:06] 2025-12-16 13:09:47,265 | INFO     | . payload setup = 9 s
[2025-12-16 14:32:06] 2025-12-16 13:09:47,265 | INFO     | . stage-in = 0 s
[2025-12-16 14:32:06] 2025-12-16 13:09:47,265 | INFO     | . payload execution = 14396 s
[2025-12-16 14:32:06] 2025-12-16 13:09:47,266 | INFO     | . stage-out = 1 s
[2025-12-16 14:32:06] 2025-12-16 13:09:47,266 | INFO     | . log creation = 0 s
[2025-12-16 14:32:06] 2025-12-16 13:09:47,266 | INFO     | ..............................
[2025-12-16 14:32:06] 2025-12-16 13:09:47,362 | INFO     | 
[2025-12-16 14:32:06] 2025-12-16 13:09:47,362 | INFO     | job summary report
[2025-12-16 14:32:06] 2025-12-16 13:09:47,362 | INFO     | --------------------------------------------------
[2025-12-16 14:32:06] 2025-12-16 13:09:47,362 | INFO     | PanDA job id: 6929570515
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | task id: 47898763
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | errors: (none)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | pilot state: finished 
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | transexitcode: 0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | exeerrorcode: 0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | exeerrordiag: 
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | exitcode: 0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | exitmsg: OK
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | cpuconsumptiontime: 55940 s
[2025-12-16 14:32:06] 2025-12-16 13:09:47,363 | INFO     | nevents: 400
[2025-12-16 14:32:06] 2025-12-16 13:09:47,364 | INFO     | neventsw: 0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,364 | INFO     | pid: 516611
[2025-12-16 14:32:06] 2025-12-16 13:09:47,364 | INFO     | pgrp: 516611
[2025-12-16 14:32:06] 2025-12-16 13:09:47,364 | INFO     | corecount: 4
[2025-12-16 14:32:06] 2025-12-16 13:09:47,364 | INFO     | event service: False
[2025-12-16 14:32:06] 2025-12-16 13:09:47,364 | INFO     | sizes: {0: 2283969, 8: 2284231, 11: 2284259, 14409: 2315535, 14411: 2324557, 14413: 2324613, 14421: 2324935}
[2025-12-16 14:32:06] 2025-12-16 13:09:47,364 | INFO     | --------------------------------------------------
[2025-12-16 14:32:06] 2025-12-16 13:09:47,364 | INFO     | 
[2025-12-16 14:32:06] 2025-12-16 13:09:47,364 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-12-16 14:32:06] 2025-12-16 13:09:47,400 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,400 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,402 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 14:32:06] 2025-12-16 13:09:47,402 | INFO     | job 6929570515 has completed (purged errors)
[2025-12-16 14:32:06] 2025-12-16 13:09:47,402 | INFO     | overall cleanup function is called
[2025-12-16 14:32:06] 2025-12-16 13:09:48,412 | INFO     | --- collectZombieJob: --- 10, [516611]
[2025-12-16 14:32:06] 2025-12-16 13:09:48,412 | INFO     | zombie collector waiting for pid 516611
[2025-12-16 14:32:06] 2025-12-16 13:09:48,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 14:32:06] 2025-12-16 13:09:48,412 | INFO     | collected zombie processes
[2025-12-16 14:32:06] 2025-12-16 13:09:48,412 | INFO     | will attempt to kill all subprocesses of pid=516611
[2025-12-16 14:32:06] 2025-12-16 13:09:49,172 | INFO     | process IDs to be killed: [516611] (in reverse order)
[2025-12-16 14:32:06] 2025-12-16 13:09:49,429 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 14:32:06] 2025-12-16 13:09:49,430 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 14:32:06] 2025-12-16 13:09:49,463 | INFO     | did not find any defunct processes belonging to 516611
[2025-12-16 14:32:06] 2025-12-16 13:09:49,496 | INFO     | did not find any defunct processes belonging to 516611
[2025-12-16 14:32:06] 2025-12-16 13:09:49,497 | INFO     | ready for new job
[2025-12-16 14:32:06] 2025-12-16 13:09:49,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 14:32:06] 2025-12-16 13:09:49,501 | INFO     | ***************************************
[2025-12-16 14:32:06] 2025-12-16 13:09:49,501 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 14:32:06] 2025-12-16 13:09:49,501 | INFO     | ***************************************
[2025-12-16 14:32:06] 2025-12-16 13:09:49,501 | INFO     | 
[2025-12-16 14:32:06] 2025-12-16 13:09:49,510 | INFO     | architecture information:
[2025-12-16 14:32:06] 2025-12-16 13:09:49,510 | INFO     | executing command: cat /etc/os-release
[2025-12-16 14:32:06] 2025-12-16 13:09:49,539 | INFO     | cat /etc/os-release:
[2025-12-16 14:32:06] NAME="CentOS Linux"
[2025-12-16 14:32:06] VERSION="7 (Core)"
[2025-12-16 14:32:06] ID="centos"
[2025-12-16 14:32:06] ID_LIKE="rhel fedora"
[2025-12-16 14:32:06] VERSION_ID="7"
[2025-12-16 14:32:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 14:32:06] ANSI_COLOR="0;31"
[2025-12-16 14:32:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 14:32:06] HOME_URL="https://www.centos.org/"
[2025-12-16 14:32:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 14:32:06] 
[2025-12-16 14:32:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 14:32:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 14:32:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 14:32:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 14:32:06] 
[2025-12-16 14:32:06] 2025-12-16 13:09:49,540 | INFO     | ***************************************
[2025-12-16 14:32:06] 2025-12-16 13:09:50,043 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-12-16 14:32:06] 2025-12-16 13:09:50,068 | INFO     | sufficient remaining disk space (3341086097408 B)
[2025-12-16 14:32:06] 2025-12-16 13:09:50,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 14:32:06] 2025-12-16 13:09:50,069 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 14:32:06] 2025-12-16 13:09:50,069 | INFO     | update_server=False
[2025-12-16 14:32:06] 2025-12-16 13:09:50,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 14:32:06] 2025-12-16 13:09:50,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 14:32:06] 2025-12-16 13:09:50,070 | INFO     | aborting loop
[2025-12-16 14:32:06] 2025-12-16 13:09:50,201 | INFO     | all data control threads have been joined
[2025-12-16 14:32:06] 2025-12-16 13:09:50,625 | INFO     | all payload control threads have been joined
[2025-12-16 14:32:06] 2025-12-16 13:09:50,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 14:32:06] 2025-12-16 13:09:50,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 14:32:06] 2025-12-16 13:09:51,072 | INFO     | [job] retrieve thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:51,075 | INFO     | [job] job monitor thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:51,209 | INFO     | [data] control thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:51,229 | INFO     | [job] validate thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:51,537 | INFO     | all job control threads have been joined
[2025-12-16 14:32:06] 2025-12-16 13:09:51,603 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:51,627 | INFO     | [payload] control thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:51,702 | INFO     | [data] copytool_in thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:51,845 | INFO     | [payload] validate_post thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:51,850 | INFO     | [payload] failed_post thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:52,097 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:52,253 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:52,373 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 14:32:06] 2025-12-16 13:09:52,540 | INFO     | [job] control thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:52,700 | INFO     | [data] copytool_out thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:53,378 | INFO     | [job] queue monitor thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:09:54,690 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:10:01,094 | INFO     | job.realtimelogging is not enabled
[2025-12-16 14:32:06] 2025-12-16 13:10:02,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 14:32:06] 2025-12-16 13:10:20,307 | INFO     | PID=501569 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 14:32:06] 2025-12-16 13:10:20,310 | INFO     | .. there are 10 such processes running
[2025-12-16 14:32:06] 2025-12-16 13:10:20,311 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 14:32:06] 2025-12-16 13:10:20,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 14:32:06] 2025-12-16 13:10:20,311 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 14:32:06] 2025-12-16 13:10:31,928 | INFO     | [monitor] cgroup control has ended
[2025-12-16 14:32:06] 2025-12-16 13:10:33,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22573915477824)>', '<ExcThread(monitor, started 22573339371264)>']
[2025-12-16 14:32:06] 2025-12-16 13:10:33,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 14:32:06] 2025-12-16 13:10:33,376 | INFO     | [monitor] control thread has ended
[2025-12-16 14:32:06] 2025-12-16 13:10:38,011 | INFO     | all workflow threads have been joined
[2025-12-16 14:32:06] 2025-12-16 13:10:38,011 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 14:32:06] 2025-12-16 13:10:38,012 | INFO     | traces error code: 0
[2025-12-16 14:32:06] 2025-12-16 13:10:38,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 14:32:06] 2025-12-16 13:10:38,172 [wrapper] ==== pilot stdout END ====
[2025-12-16 14:32:06] 2025-12-16 13:10:38,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 14:32:06] 2025-12-16 13:10:38,180 [wrapper] pilotpid: 501569
[2025-12-16 14:32:06] 2025-12-16 13:10:38,184 [wrapper] Pilot exit status: 0
[2025-12-16 14:32:06] 2025-12-16 13:10:38,200 [wrapper] pandaids: 6929570515
[2025-12-16 14:32:06] 2025-12-16 13:10:38,385 [wrapper] cleanup supervisor_pilot 1066079 501570
[2025-12-16 14:32:06] 2025-12-16 13:10:38,389 [wrapper] Test setup, not cleaning
[2025-12-16 14:32:06] 2025-12-16 13:10:38,393 [wrapper] apfmon messages muted
[2025-12-16 14:32:06] 2025-12-16 13:10:38,397 [wrapper] ==== wrapper stdout END ====
[2025-12-16 14:32:06] 2025-12-16 13:10:38,400 [wrapper] ==== wrapper stderr END ====
[2025-12-16 14:32:06]  *** Error codes and diagnostics ***
[2025-12-16 14:32:06]     "exeErrorCode": 0,
[2025-12-16 14:32:06]     "exeErrorDiag": "",
[2025-12-16 14:32:06]     "pilotErrorCode": 0,
[2025-12-16 14:32:06]     "pilotErrorDiag": "",
[2025-12-16 14:32:06]  *** Listing of results directory ***
[2025-12-16 14:32:06] total 447248
[2025-12-16 14:32:06] -rwx------ 1 boinc boinc     36322 Dec 15 09:08 runpilot2-wrapper.sh
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc      5112 Dec 15 09:08 queuedata.json
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc    579449 Dec 15 09:08 pilot3.tar.gz
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc       100 Dec 16 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 14:32:06] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 10:08 run_atlas
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc       105 Dec 16 10:08 job.xml
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc      6692 Dec 16 10:08 init_data.xml
[2025-12-16 14:32:06] -rw-r--r-- 2 boinc boinc 224681964 Dec 16 10:08 EVNT.47898761._000462.pool.root.1
[2025-12-16 14:32:06] -rw-r--r-- 2 boinc boinc     15847 Dec 16 10:08 start_atlas.sh
[2025-12-16 14:32:06] drwxrwx--x 2 boinc boinc      4096 Dec 16 10:08 shared
[2025-12-16 14:32:06] -rw-r--r-- 2 boinc boinc    592389 Dec 16 10:08 input.tar.gz
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc         0 Dec 16 10:08 boinc_lockfile
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc      2508 Dec 16 10:08 pandaJob.out
[2025-12-16 14:32:06] -rw------- 1 boinc boinc    994528 Dec 16 10:09 agis_schedconf.cvmfs.json
[2025-12-16 14:32:06] drwx------ 5 boinc boinc      4096 Dec 16 10:09 pilot3
[2025-12-16 14:32:06] -rw------- 1 boinc boinc 224606343 Dec 16 14:08 HITS.47898763._014670.pool.root.1
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc       529 Dec 16 14:09 boinc_task_state.xml
[2025-12-16 14:32:06] -rw------- 1 boinc boinc      1028 Dec 16 14:09 memory_monitor_summary.json
[2025-12-16 14:32:06] -rw------- 1 boinc boinc   1516240 Dec 16 14:09 agis_ddmendpoints.agis.ALL.json
[2025-12-16 14:32:06] -rw------- 1 boinc boinc    391806 Dec 16 14:09 log.47898763._014670.job.log.tgz.1
[2025-12-16 14:32:06] -rw------- 1 boinc boinc      7782 Dec 16 14:09 heartbeat.json
[2025-12-16 14:32:06] -rw------- 1 boinc boinc        95 Dec 16 14:10 pilot_heartbeat.json
[2025-12-16 14:32:06] -rw------- 1 boinc boinc      4907 Dec 16 14:10 pilotlog.txt
[2025-12-16 14:32:06] -rw------- 1 boinc boinc   1998292 Dec 16 14:10 log.47898763._014670.job.log.1
[2025-12-16 14:32:06] -rw------- 1 boinc boinc       357 Dec 16 14:10 output.list
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc       620 Dec 16 14:10 runtime_log
[2025-12-16 14:32:06] -rw------- 1 boinc boinc   2406400 Dec 16 14:10 result.tar.gz
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc      9223 Dec 16 14:10 runtime_log.err
[2025-12-16 14:32:06] -rw------- 1 boinc boinc       666 Dec 16 14:10 OqKODmEoIp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8PXKDmLtI8Pn.diag
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc        26 Dec 16 14:32 wrapper_checkpoint.txt
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc      8192 Dec 16 14:32 boinc_mmap_file
[2025-12-16 14:32:06] -rw-r--r-- 1 boinc boinc     20757 Dec 16 14:32 stderr.txt
[2025-12-16 14:32:06] HITS file was successfully produced:
[2025-12-16 14:32:06] -rw------- 1 boinc boinc 224606343 Dec 16 14:08 shared/HITS.pool.root.1
[2025-12-16 14:32:06]  *** Contents of shared directory: ***
[2025-12-16 14:32:06] total 441716
[2025-12-16 14:32:06] -rw-r--r-- 2 boinc boinc 224681964 Dec 16 10:08 ATLAS.root_0
[2025-12-16 14:32:06] -rw-r--r-- 2 boinc boinc     15847 Dec 16 10:08 start_atlas.sh
[2025-12-16 14:32:06] -rw-r--r-- 2 boinc boinc    592389 Dec 16 10:08 input.tar.gz
[2025-12-16 14:32:06] -rw------- 1 boinc boinc 224606343 Dec 16 14:08 HITS.pool.root.1
[2025-12-16 14:32:06] -rw------- 1 boinc boinc   2406400 Dec 16 14:10 result.tar.gz
14:32:07 (494747): run_atlas exited; CPU time 56956.266660
14:32:07 (494747): called boinc_finish(0)

</stderr_txt>
]]>

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